Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50425.t1 | XP_013455028.2 | 99.3 | 444 | 3 | 0 | 1 | 444 | 1 | 444 | 7.80E-219 | 769.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50425.t1 | Q94B55 | 56.2 | 459 | 176 | 5 | 1 | 444 | 1 | 449 | 1.1e-112 | 408.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50425.t1 | A0A396I2X5 | 99.3 | 444 | 3 | 0 | 1 | 444 | 1 | 444 | 5.6e-219 | 769.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050380 | MS.gene50425 | 0.810188 | 1.31E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene50425 | -0.810412 | 1.17E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene50425 | -0.81112 | 8.21E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene50425 | 0.802818 | 4.68E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene50425 | -0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene50425 | -0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene50425 | -0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene50425 | -0.806786 | 6.95E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene50425 | -0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene50425 | -0.808031 | 3.78E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene50425 | -0.809243 | 2.08E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene50425 | -0.814161 | 1.77E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene50425 | -0.838836 | 2.27E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene50425 | -0.813503 | 2.48E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50425.t1 | MTR_4g021880 | 99.324 | 444 | 3 | 0 | 1 | 444 | 80 | 523 | 0.0 | 910 |
| MS.gene50425.t1 | MTR_4g021880 | 99.068 | 322 | 3 | 0 | 1 | 322 | 80 | 401 | 0.0 | 654 |
| MS.gene50425.t1 | MTR_2g096760 | 60.364 | 439 | 163 | 7 | 11 | 442 | 4 | 438 | 0.0 | 524 |
| MS.gene50425.t1 | MTR_4g063830 | 60.089 | 451 | 162 | 7 | 1 | 444 | 1 | 440 | 0.0 | 514 |
| MS.gene50425.t1 | MTR_0020s0130 | 27.126 | 435 | 251 | 10 | 22 | 420 | 14 | 418 | 3.11e-34 | 134 |
| MS.gene50425.t1 | MTR_4g129470 | 27.897 | 466 | 246 | 13 | 22 | 433 | 20 | 449 | 3.15e-33 | 131 |
| MS.gene50425.t1 | MTR_1g100797 | 28.771 | 358 | 198 | 9 | 55 | 384 | 47 | 375 | 4.80e-32 | 128 |
| MS.gene50425.t1 | MTR_4g129470 | 27.820 | 399 | 194 | 12 | 91 | 433 | 1 | 361 | 1.28e-21 | 97.1 |
| MS.gene50425.t1 | MTR_1g100797 | 27.946 | 297 | 157 | 9 | 116 | 384 | 4 | 271 | 2.75e-20 | 92.8 |
| MS.gene50425.t1 | MTR_7g115280 | 26.214 | 309 | 185 | 9 | 22 | 302 | 18 | 311 | 1.88e-13 | 72.4 |
| MS.gene50425.t1 | MTR_6g027840 | 31.250 | 192 | 114 | 5 | 57 | 247 | 181 | 355 | 2.43e-13 | 72.4 |
| MS.gene50425.t1 | MTR_6g027840 | 27.751 | 209 | 136 | 3 | 56 | 254 | 246 | 449 | 5.66e-11 | 65.1 |
| MS.gene50425.t1 | MTR_7g100390 | 28.270 | 237 | 143 | 10 | 13 | 242 | 45 | 261 | 1.61e-12 | 69.7 |
| MS.gene50425.t1 | MTR_1g089180 | 25.893 | 224 | 149 | 6 | 21 | 233 | 220 | 437 | 4.02e-11 | 65.1 |
| MS.gene50425.t1 | MTR_1g115575 | 25.806 | 217 | 145 | 5 | 7 | 222 | 121 | 322 | 6.21e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50425.t1 | AT2G28840 | 59.695 | 459 | 160 | 7 | 1 | 444 | 1 | 449 | 0.0 | 518 |
| MS.gene50425.t1 | AT2G28840 | 64.249 | 386 | 120 | 5 | 74 | 444 | 53 | 435 | 3.93e-169 | 483 |
| MS.gene50425.t1 | AT5G07270 | 28.465 | 404 | 218 | 9 | 55 | 417 | 47 | 420 | 4.95e-33 | 130 |
| MS.gene50425.t1 | AT5G57740 | 26.615 | 387 | 232 | 8 | 22 | 384 | 20 | 378 | 1.82e-27 | 115 |
| MS.gene50425.t1 | AT1G07710 | 29.148 | 223 | 128 | 10 | 9 | 223 | 58 | 258 | 4.51e-13 | 71.6 |
| MS.gene50425.t1 | AT1G07710 | 29.148 | 223 | 128 | 10 | 9 | 223 | 58 | 258 | 4.51e-13 | 71.6 |
| MS.gene50425.t1 | AT3G04710 | 26.415 | 265 | 162 | 6 | 24 | 261 | 244 | 502 | 5.20e-13 | 71.6 |
| MS.gene50425.t1 | AT3G04710 | 26.415 | 265 | 162 | 6 | 24 | 261 | 20 | 278 | 8.17e-13 | 70.5 |
| MS.gene50425.t1 | AT3G12360 | 27.619 | 210 | 130 | 7 | 18 | 223 | 118 | 309 | 1.89e-12 | 69.7 |
| MS.gene50425.t1 | AT3G12360 | 27.619 | 210 | 130 | 7 | 18 | 223 | 130 | 321 | 1.92e-12 | 69.7 |
| MS.gene50425.t1 | AT5G60070 | 27.734 | 256 | 162 | 6 | 16 | 261 | 30 | 272 | 2.11e-12 | 69.3 |
| MS.gene50425.t1 | AT5G20350 | 25.984 | 254 | 168 | 6 | 3 | 254 | 17 | 252 | 3.15e-12 | 68.9 |
Find 119 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATGTCATTCTCCTTTAAT+AGG | 0.198477 | 4.4:-79608033 | None:intergenic |
| CATAGACACACACCTGTTTA+TGG | 0.203955 | 4.4:-79606363 | None:intergenic |
| CAAGAGCCCCGTTGTCTAAT+AGG | 0.208269 | 4.4:-79607064 | None:intergenic |
| CTTCACCTGTTGCAGATTCT+TGG | 0.226383 | 4.4:+79606851 | MS.gene50425:CDS |
| TCAAGAAGCCAAGGCCTTAT+TGG | 0.227680 | 4.4:+79607970 | MS.gene50425:CDS |
| TTGCACTATGCTGCTTATTA+TGG | 0.284145 | 4.4:+79606787 | MS.gene50425:CDS |
| TGAGGATGATGTTGGTGTTT+TGG | 0.299141 | 4.4:+79604966 | MS.gene50425:CDS |
| TGGCCATGTAGATTCATTAA+AGG | 0.303923 | 4.4:+79606807 | MS.gene50425:CDS |
| TGTCCGGATGCTGCTTGCTT+GGG | 0.304175 | 4.4:+79607256 | MS.gene50425:CDS |
| CATCAGCCGCACCTCTTGTT+TGG | 0.313334 | 4.4:+79607915 | MS.gene50425:CDS |
| AGGATCGCTAGTCGCAATTC+AGG | 0.319801 | 4.4:+79608546 | MS.gene50425:CDS |
| CCCGTGGTGCAACCGGTTGC+AGG | 0.331520 | 4.4:-79608348 | None:intergenic |
| TTTGCTTCTGCTGTTGTGAA+TGG | 0.354727 | 4.4:+79604916 | MS.gene50425:CDS |
| TTCATTCCCTATTAGACAAC+GGG | 0.360140 | 4.4:+79607057 | MS.gene50425:CDS |
| GAGAGAAAAGGCCCTATTAA+AGG | 0.364810 | 4.4:+79608021 | MS.gene50425:CDS |
| AACTGGTCCCGTGGTGCAAC+CGG | 0.369241 | 4.4:-79608355 | None:intergenic |
| AGGATGGCACCTCGACAAAA+TGG | 0.371108 | 4.4:-79608381 | None:intergenic |
| ACGCCTTACTAGAAGCTAAC+AGG | 0.373800 | 4.4:+79607996 | MS.gene50425:CDS |
| TCTCTTATAGGAAAGCAATA+TGG | 0.375095 | 4.4:+79608215 | MS.gene50425:intron |
| AGGACATTATGCAGATTTCC+TGG | 0.380514 | 4.4:+79607188 | MS.gene50425:intron |
| GTGCAACCGGTTGCAGGATC+AGG | 0.381813 | 4.4:-79608342 | None:intergenic |
| GTGTCCGGATGCTGCTTGCT+TGG | 0.389067 | 4.4:+79607255 | MS.gene50425:CDS |
| AAGAGCCCCGTTGTCTAATA+GGG | 0.391759 | 4.4:-79607063 | None:intergenic |
| TGTGCTTCAACCGGTGGATA+CGG | 0.393674 | 4.4:+79607089 | MS.gene50425:CDS |
| AGACATCGACTTTGACATTC+CGG | 0.396524 | 4.4:-79606333 | None:intergenic |
| TATGTCATTCTCCTTTAATA+GGG | 0.400659 | 4.4:-79608032 | None:intergenic |
| ATATGTAGCGGTGTTCTTCC+AGG | 0.406530 | 4.4:-79607206 | None:intergenic |
| CCTGCAACCGGTTGCACCAC+GGG | 0.408050 | 4.4:+79608348 | MS.gene50425:CDS |
| GATGGAAATTGTTGAAAGTA+TGG | 0.408192 | 4.4:+79604942 | MS.gene50425:CDS |
| GCTCTTGTTTGTGCTTCAAC+CGG | 0.413267 | 4.4:+79607080 | MS.gene50425:CDS |
| TTGTCAGCCATTGGCTCATT+CGG | 0.419213 | 4.4:+79608522 | MS.gene50425:CDS |
| TTAGGTGCTTTCAATGTTGT+TGG | 0.425103 | 4.4:+79606309 | MS.gene50425:intron |
| TGCATCACAGCCAACATTAA+CGG | 0.430406 | 4.4:-79606520 | None:intergenic |
| CTCCCCAAGCAAGCAGCATC+CGG | 0.432906 | 4.4:-79607259 | None:intergenic |
| TGCTTTCAATGTTGTTGGAC+CGG | 0.433448 | 4.4:+79606314 | MS.gene50425:CDS |
| TGTCTTGAATCGCCATAAAC+AGG | 0.438427 | 4.4:+79606351 | MS.gene50425:CDS |
| TCTTGGCAACATTTAATTGA+AGG | 0.438454 | 4.4:-79608401 | None:intergenic |
| AGGCTTCAATTAGATTCCTC+CGG | 0.459384 | 4.4:+79607287 | MS.gene50425:CDS |
| TTCAAGAGTTTGTCAGCCAT+TGG | 0.462380 | 4.4:+79608513 | MS.gene50425:CDS |
| ATCACTATCAGTCTTGATCT+TGG | 0.466006 | 4.4:-79608418 | None:intergenic |
| CTGATGAACTTTAGCGGAGA+TGG | 0.469218 | 4.4:-79607938 | None:intergenic |
| AAGAAGCCTGATCCTGCAAC+CGG | 0.473327 | 4.4:+79608336 | MS.gene50425:CDS |
| CCTCGACAAAATGGACAAAC+TGG | 0.484711 | 4.4:-79608372 | None:intergenic |
| TGACCTCAATTGTGCACACT+TGG | 0.486372 | 4.4:-79608260 | None:intergenic |
| CTCCCTGTTAGCTTCTAGTA+AGG | 0.494532 | 4.4:-79607999 | None:intergenic |
| GTGCTTCAACCGGTGGATAC+GGG | 0.495609 | 4.4:+79607090 | MS.gene50425:CDS |
| TGCTTGCTTGGGGAGCAGAT+AGG | 0.501868 | 4.4:+79607267 | MS.gene50425:CDS |
| TGGAAGAACACCGCTACATA+TGG | 0.502557 | 4.4:+79607208 | MS.gene50425:CDS |
| GCTGTGATGCATGGAAAGAC+TGG | 0.505325 | 4.4:+79606532 | MS.gene50425:CDS |
| AGCTCGCTGATGAACTTTAG+CGG | 0.516523 | 4.4:-79607944 | None:intergenic |
| CTTGTTTGTGCTTCAACCGG+TGG | 0.520146 | 4.4:+79607083 | MS.gene50425:CDS |
| CGACCAAGTGTGCACAATTG+AGG | 0.520454 | 4.4:+79608257 | MS.gene50425:CDS |
| ACTAACCAAGAATCTGCAAC+AGG | 0.521723 | 4.4:-79606856 | None:intergenic |
| TTCTTAAGAGCAACTGTGAA+CGG | 0.522067 | 4.4:-79607857 | None:intergenic |
| GTGGTTCTGTGGACTGTGTC+CGG | 0.525522 | 4.4:+79607240 | MS.gene50425:CDS |
| GGCTTCAATTAGATTCCTCC+GGG | 0.526424 | 4.4:+79607288 | MS.gene50425:CDS |
| CGCCTTACTAGAAGCTAACA+GGG | 0.528470 | 4.4:+79607997 | MS.gene50425:CDS |
| AACAAGAGGTGCGGCTGATG+AGG | 0.531096 | 4.4:-79607912 | None:intergenic |
| AGCTAACAGGGAGAGAGAAA+AGG | 0.531496 | 4.4:+79608009 | MS.gene50425:CDS |
| GGCAACATTTAATTGAAGGA+TGG | 0.535795 | 4.4:-79608397 | None:intergenic |
| AGAAAATCAAATTTCAGCGA+AGG | 0.537043 | 4.4:+79608480 | MS.gene50425:CDS |
| CGGCTGATGAGGGATCGAGC+AGG | 0.540258 | 4.4:-79607901 | None:intergenic |
| TCTTGAGGCAGCATAGTGCT+AGG | 0.541497 | 4.4:-79608317 | None:intergenic |
| TTGCAGGATCAGGCTTCTTG+AGG | 0.542464 | 4.4:-79608332 | None:intergenic |
| GAAAATCAAATTTCAGCGAA+GGG | 0.543834 | 4.4:+79608481 | MS.gene50425:CDS |
| TGCTGTTGTGAATGGTGAGA+TGG | 0.545702 | 4.4:+79604924 | MS.gene50425:CDS |
| CAGCCATTGGCTCATTCGGA+AGG | 0.547162 | 4.4:+79608526 | MS.gene50425:CDS |
| GGCGGCTCGTGGTGGTTCTG+TGG | 0.548964 | 4.4:+79607229 | MS.gene50425:CDS |
| ACAAGAGGTGCGGCTGATGA+GGG | 0.550454 | 4.4:-79607911 | None:intergenic |
| AACTACCTCGATCCGACCAT+TGG | 0.550881 | 4.4:-79605037 | None:intergenic |
| ATGGAAAAGCTTATTCAAGC+TGG | 0.555583 | 4.4:+79606559 | MS.gene50425:CDS |
| CTTCATTTAGCAGCTGCCAA+TGG | 0.555784 | 4.4:+79605021 | MS.gene50425:CDS |
| GTCCGGATGCTGCTTGCTTG+GGG | 0.558568 | 4.4:+79607257 | MS.gene50425:CDS |
| AGCAGCAAGGTGCAGCGGCG+TGG | 0.564799 | 4.4:-79607012 | None:intergenic |
| AATCAATCGAGTTGTGTGGT+GGG | 0.566878 | 4.4:+79604862 | MS.gene50425:CDS |
| CTACATATGGCGGCTCGTGG+TGG | 0.570162 | 4.4:+79607221 | MS.gene50425:CDS |
| GTGAACATAAGAGATGGAAA+TGG | 0.571705 | 4.4:+79606987 | MS.gene50425:CDS |
| TCAGAACGTAGTGGAGATGA+AGG | 0.572443 | 4.4:-79608055 | None:intergenic |
| CGTTGTCTAATAGGGAATGA+AGG | 0.572603 | 4.4:-79607055 | None:intergenic |
| TCTCTAGACACCGTTAATGT+TGG | 0.577223 | 4.4:+79606510 | MS.gene50425:intron |
| CAAGTATGATGATATTGTCT+CGG | 0.577587 | 4.4:+79608081 | MS.gene50425:CDS |
| CGCTAGTCGCAATTCAGGAA+AGG | 0.581409 | 4.4:+79608551 | MS.gene50425:CDS |
| GAATCAATCGAGTTGTGTGG+TGG | 0.581898 | 4.4:+79604861 | MS.gene50425:CDS |
| GCATGGAAAGACTGGTTGCA+TGG | 0.582253 | 4.4:+79606540 | MS.gene50425:CDS |
| ATCAATCGAGTTGTGTGGTG+GGG | 0.584222 | 4.4:+79604863 | MS.gene50425:CDS |
| ACCTTGCTGCTCGTCATAGA+CGG | 0.587192 | 4.4:+79607024 | MS.gene50425:CDS |
| AATTGTTGAAAGTATGGTTG+AGG | 0.587911 | 4.4:+79604948 | MS.gene50425:CDS |
| ATTTAGCAGCTGCCAATGGT+CGG | 0.589763 | 4.4:+79605025 | MS.gene50425:CDS |
| CGATTATTACCCGTATCCAC+CGG | 0.590839 | 4.4:-79607099 | None:intergenic |
| GGCTGATGAGGGATCGAGCA+GGG | 0.598983 | 4.4:-79607900 | None:intergenic |
| CTTGAGGCAGCATAGTGCTA+GGG | 0.599231 | 4.4:-79608316 | None:intergenic |
| TTGATGCCGAAAAGCAATGA+GGG | 0.600242 | 4.4:+79608574 | MS.gene50425:CDS |
| TCCTGCAACCGGTTGCACCA+CGG | 0.601001 | 4.4:+79608347 | MS.gene50425:CDS |
| TTGGCAGCTGCTAAATGAAG+AGG | 0.601943 | 4.4:-79605018 | None:intergenic |
| CGAGCTCAATCAAGAAGCCA+AGG | 0.607931 | 4.4:+79607961 | MS.gene50425:CDS |
| TTAATGTTGGCTGTGATGCA+TGG | 0.609200 | 4.4:+79606523 | MS.gene50425:CDS |
| TGACGAGCAGCAAGGTGCAG+CGG | 0.609387 | 4.4:-79607017 | None:intergenic |
| AGATTTGTGAACATAAGAGA+TGG | 0.609907 | 4.4:+79606981 | MS.gene50425:CDS |
| AGCGGAGATGGCCAAACAAG+AGG | 0.611353 | 4.4:-79607926 | None:intergenic |
| TCAATCGAGTTGTGTGGTGG+GGG | 0.613318 | 4.4:+79604864 | MS.gene50425:CDS |
| GATCCTTCCGAATGAGCCAA+TGG | 0.614518 | 4.4:-79608529 | None:intergenic |
| CTTCATTCCCTATTAGACAA+CGG | 0.614895 | 4.4:+79607056 | MS.gene50425:CDS |
| CCAGTCCAACAAAACCAAGA+AGG | 0.616065 | 4.4:+79608454 | MS.gene50425:CDS |
| CCGCTACATATGGCGGCTCG+TGG | 0.616354 | 4.4:+79607218 | MS.gene50425:CDS |
| TGATATTGTCTCGGATTCTG+AGG | 0.617221 | 4.4:+79608090 | MS.gene50425:CDS |
| GCACACATTTGATGATCACA+AGG | 0.625070 | 4.4:-79608285 | None:intergenic |
| ATAAGCAGCATAGTGCAAGC+AGG | 0.631181 | 4.4:-79606782 | None:intergenic |
| AGTATGGTTGAGGATGATGT+TGG | 0.632674 | 4.4:+79604958 | MS.gene50425:CDS |
| AAATGGACAAACTGGTCCCG+TGG | 0.640279 | 4.4:-79608364 | None:intergenic |
| AGATGGCCAAACAAGAGGTG+CGG | 0.640644 | 4.4:-79607921 | None:intergenic |
| AGCTGCCAATGGTCGGATCG+AGG | 0.641596 | 4.4:+79605032 | MS.gene50425:CDS |
| TAGCCTTTAATGAATCTACA+TGG | 0.650370 | 4.4:-79606810 | None:intergenic |
| GTTGATGCCGAAAAGCAATG+AGG | 0.652343 | 4.4:+79608573 | MS.gene50425:CDS |
| AAGAACACCGCTACATATGG+CGG | 0.654317 | 4.4:+79607211 | MS.gene50425:CDS |
| CCACGAGCCGCCATATGTAG+CGG | 0.686938 | 4.4:-79607218 | None:intergenic |
| GCCGTCTATGACGAGCAGCA+AGG | 0.687428 | 4.4:-79607025 | None:intergenic |
| TACTTGCTATCAGAACGTAG+TGG | 0.708760 | 4.4:-79608064 | None:intergenic |
| TCAGAATCAATCGAGTTGTG+TGG | 0.722101 | 4.4:+79604858 | MS.gene50425:CDS |
| TCATTCCCTATTAGACAACG+GGG | 0.780882 | 4.4:+79607058 | MS.gene50425:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTTAATTTTAAA+TGG | + | chr4.4:79607457-79607476 | MS.gene50425:intron | 0.0% |
| !! | AAATTATATCATAAAAAACT+AGG | + | chr4.4:79607390-79607409 | MS.gene50425:intron | 10.0% |
| !! | ATTTACTTAAATTATACATA+TGG | + | chr4.4:79605157-79605176 | MS.gene50425:intron | 10.0% |
| !!! | ATTTTTTCTAAAATCTATTT+TGG | - | chr4.4:79605829-79605848 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+CGG | + | chr4.4:79605280-79605299 | MS.gene50425:intron | 10.0% |
| !!! | TTTTTGAAAAAATTACATTT+TGG | + | chr4.4:79605705-79605724 | MS.gene50425:intron | 10.0% |
| !! | TAGTCAAACTATAATTTAAA+AGG | - | chr4.4:79607702-79607721 | None:intergenic | 15.0% |
| !!! | ACTTCTAAATAATAGTTTTA+TGG | - | chr4.4:79606119-79606138 | None:intergenic | 15.0% |
| !! | AATCATAGATTCTAAATCAA+TGG | + | chr4.4:79607357-79607376 | MS.gene50425:intron | 20.0% |
| !! | ACTTAAATTATACATATGGT+TGG | + | chr4.4:79605161-79605180 | MS.gene50425:intron | 20.0% |
| !! | ATTATAAGTTACTTATTTGC+TGG | + | chr4.4:79608187-79608206 | MS.gene50425:intron | 20.0% |
| !! | TATATCATAAAAAACTAGGA+AGG | + | chr4.4:79607394-79607413 | MS.gene50425:intron | 20.0% |
| !! | TATGATATAATTTACACATG+TGG | - | chr4.4:79607383-79607402 | None:intergenic | 20.0% |
| !! | TGATTAAAATTGAGTTTGAA+AGG | - | chr4.4:79606006-79606025 | None:intergenic | 20.0% |
| !!! | ACAAGAGTTAAATTTTACTA+AGG | - | chr4.4:79607813-79607832 | None:intergenic | 20.0% |
| !!! | AGATGTTTTTTTTGCTTTAA+AGG | + | chr4.4:79605851-79605870 | MS.gene50425:intron | 20.0% |
| !!! | ATAATTTGCTTTTAAAATCC+CGG | - | chr4.4:79607435-79607454 | None:intergenic | 20.0% |
| !!! | GAACTTTTTATGACTATATT+TGG | + | chr4.4:79605380-79605399 | MS.gene50425:intron | 20.0% |
| !!! | GTTGAAAAGTTTATTTTTAG+TGG | + | chr4.4:79605585-79605604 | MS.gene50425:intron | 20.0% |
| !!! | TCATATTAAACGCATTTTAA+GGG | + | chr4.4:79606624-79606643 | MS.gene50425:intron | 20.0% |
| !!! | TTGAAAAAATTACATTTTGG+AGG | + | chr4.4:79605708-79605727 | MS.gene50425:intron | 20.0% |
| !!! | TTTTAAGGGTAAAATTTAGT+TGG | + | chr4.4:79606638-79606657 | MS.gene50425:intron | 20.0% |
| ! | AAGTATGAAATACCAAATAG+AGG | - | chr4.4:79607609-79607628 | None:intergenic | 25.0% |
| ! | ATAACCAACAATATCTATCA+GGG | - | chr4.4:79605254-79605273 | None:intergenic | 25.0% |
| ! | CCAATTATCCAAAAAATCAA+AGG | - | chr4.4:79608127-79608146 | None:intergenic | 25.0% |
| ! | TAAATGTATCTTTGGATTGA+AGG | + | chr4.4:79605666-79605685 | MS.gene50425:intron | 25.0% |
| ! | TAGAGACTCAAAAAGAAAAA+GGG | - | chr4.4:79606496-79606515 | None:intergenic | 25.0% |
| ! | TATGTCATTCTCCTTTAATA+GGG | - | chr4.4:79608035-79608054 | None:intergenic | 25.0% |
| ! | TGTTAATCTTAGACGAAAAT+TGG | + | chr4.4:79607134-79607153 | MS.gene50425:intron | 25.0% |
| ! | TTTCTTGTATTGAACAAACT+TGG | + | chr4.4:79606445-79606464 | MS.gene50425:intron | 25.0% |
| !! | CTCATATTAAACGCATTTTA+AGG | + | chr4.4:79606623-79606642 | MS.gene50425:intron | 25.0% |
| !!! | AAGCTAATTTTGGTCATTTT+TGG | + | chr4.4:79605534-79605553 | MS.gene50425:intron | 25.0% |
| !!! | CCTTTGATTTTTTGGATAAT+TGG | + | chr4.4:79608124-79608143 | MS.gene50425:intron | 25.0% |
| !!! | TTAACTTTCTTTTCAAGTGT+TGG | + | chr4.4:79605563-79605582 | MS.gene50425:intron | 25.0% |
| AAGGTTTCATGATTAATTGC+CGG | + | chr4.4:79607413-79607432 | MS.gene50425:intron | 30.0% | |
| AGAAAATCAAATTTCAGCGA+AGG | + | chr4.4:79608480-79608499 | MS.gene50425:CDS | 30.0% | |
| AGATTTGTGAACATAAGAGA+TGG | + | chr4.4:79606981-79607000 | MS.gene50425:CDS | 30.0% | |
| AGTGGCTATAAATGTATCTT+TGG | + | chr4.4:79605658-79605677 | MS.gene50425:intron | 30.0% | |
| ATTGATGAGTTTATTCAGAG+TGG | + | chr4.4:79605640-79605659 | MS.gene50425:intron | 30.0% | |
| CAAGTATGATGATATTGTCT+CGG | + | chr4.4:79608081-79608100 | MS.gene50425:CDS | 30.0% | |
| CATAACCAACAATATCTATC+AGG | - | chr4.4:79605255-79605274 | None:intergenic | 30.0% | |
| CTAGAGACTCAAAAAGAAAA+AGG | - | chr4.4:79606497-79606516 | None:intergenic | 30.0% | |
| CTTGTGTAAATATTCTTTGC+AGG | + | chr4.4:79607828-79607847 | MS.gene50425:intron | 30.0% | |
| GAAAATCAAATTTCAGCGAA+GGG | + | chr4.4:79608481-79608500 | MS.gene50425:CDS | 30.0% | |
| GAAACATATGTTTACTTACC+CGG | - | chr4.4:79607309-79607328 | None:intergenic | 30.0% | |
| GATGGAAATTGTTGAAAGTA+TGG | + | chr4.4:79604942-79604961 | MS.gene50425:CDS | 30.0% | |
| GTATGTCATTCTCCTTTAAT+AGG | - | chr4.4:79608036-79608055 | None:intergenic | 30.0% | |
| TAACCAACAATATCTATCAG+GGG | - | chr4.4:79605253-79605272 | None:intergenic | 30.0% | |
| TACTTCTTTGAACCTCTATT+TGG | + | chr4.4:79607594-79607613 | MS.gene50425:intron | 30.0% | |
| TAGCCTTTAATGAATCTACA+TGG | - | chr4.4:79606813-79606832 | None:intergenic | 30.0% | |
| TCTCTTATAGGAAAGCAATA+TGG | + | chr4.4:79608215-79608234 | MS.gene50425:intron | 30.0% | |
| TCTTCATTAAGACTGATCAA+AGG | + | chr4.4:79607168-79607187 | MS.gene50425:intron | 30.0% | |
| TCTTGGCAACATTTAATTGA+AGG | - | chr4.4:79608404-79608423 | None:intergenic | 30.0% | |
| TGAGAACATACAAATACGAA+TGG | + | chr4.4:79606915-79606934 | MS.gene50425:intron | 30.0% | |
| ! | AATTGTTGAAAGTATGGTTG+AGG | + | chr4.4:79604948-79604967 | MS.gene50425:CDS | 30.0% |
| ! | AGAAAGTGCAGAAATTACAA+AGG | - | chr4.4:79606430-79606449 | None:intergenic | 30.0% |
| ! | GAGTTGACTAAAGCTAATTT+TGG | + | chr4.4:79605524-79605543 | MS.gene50425:intron | 30.0% |
| ! | TGAATTGATTAGCTGAAAAC+AGG | + | chr4.4:79607644-79607663 | MS.gene50425:intron | 30.0% |
| !! | TTATCTTTGTCATTGACTCT+TGG | + | chr4.4:79606286-79606305 | MS.gene50425:intron | 30.0% |
| !! | TTGCTGGTTATTTCTCTTAT+AGG | + | chr4.4:79608203-79608222 | MS.gene50425:intron | 30.0% |
| !! | TTTCTATACGCATTTCTAGT+TGG | + | chr4.4:79606399-79606418 | MS.gene50425:intron | 30.0% |
| !! | TTTGATTTTCTTGACCTTCT+TGG | - | chr4.4:79608471-79608490 | None:intergenic | 30.0% |
| !!! | ATAGAGAAGTGTTTTGTGAT+TGG | + | chr4.4:79605348-79605367 | MS.gene50425:intron | 30.0% |
| !!! | TGACACTACATGCTATTTTT+GGG | + | chr4.4:79607563-79607582 | MS.gene50425:intron | 30.0% |
| !!! | TTGACACTACATGCTATTTT+TGG | + | chr4.4:79607562-79607581 | MS.gene50425:intron | 30.0% |
| !!! | TTTGGATTAGTTTTTAGCTC+AGG | + | chr4.4:79605398-79605417 | MS.gene50425:intron | 30.0% |
| AAACATGAGAGATGCACAAA+GGG | - | chr4.4:79606268-79606287 | None:intergenic | 35.0% | |
| AAACTAAACAAACACACGCT+TGG | - | chr4.4:79605772-79605791 | None:intergenic | 35.0% | |
| AGGTTTCATGATTAATTGCC+GGG | + | chr4.4:79607414-79607433 | MS.gene50425:intron | 35.0% | |
| ATAACCAACCATATGTACCA+GGG | - | chr4.4:79605129-79605148 | None:intergenic | 35.0% | |
| ATCACTATCAGTCTTGATCT+TGG | - | chr4.4:79608421-79608440 | None:intergenic | 35.0% | |
| ATGAATCACTGACACAAACA+CGG | - | chr4.4:79605330-79605349 | None:intergenic | 35.0% | |
| ATGGAAAAGCTTATTCAAGC+TGG | + | chr4.4:79606559-79606578 | MS.gene50425:CDS | 35.0% | |
| ATGTATCTTTGGATTGAAGG+TGG | + | chr4.4:79605669-79605688 | MS.gene50425:intron | 35.0% | |
| CTTCATTCCCTATTAGACAA+CGG | + | chr4.4:79607056-79607075 | MS.gene50425:CDS | 35.0% | |
| GAAAGGAAATGACTTACGTT+TGG | - | chr4.4:79605989-79606008 | None:intergenic | 35.0% | |
| GGCAACATTTAATTGAAGGA+TGG | - | chr4.4:79608400-79608419 | None:intergenic | 35.0% | |
| GTCAAAATCATTGAACGGTT+TGG | - | chr4.4:79606949-79606968 | None:intergenic | 35.0% | |
| GTGAACATAAGAGATGGAAA+TGG | + | chr4.4:79606987-79607006 | MS.gene50425:CDS | 35.0% | |
| GTTGAGAAGTTTACAGAAAG+TGG | + | chr4.4:79606184-79606203 | MS.gene50425:intron | 35.0% | |
| TAAACATGAGAGATGCACAA+AGG | - | chr4.4:79606269-79606288 | None:intergenic | 35.0% | |
| TGGCCATGTAGATTCATTAA+AGG | + | chr4.4:79606807-79606826 | MS.gene50425:CDS | 35.0% | |
| TTAGGTGCTTTCAATGTTGT+TGG | + | chr4.4:79606309-79606328 | MS.gene50425:intron | 35.0% | |
| TTCATTCCCTATTAGACAAC+GGG | + | chr4.4:79607057-79607076 | MS.gene50425:CDS | 35.0% | |
| TTCTTAAGAGCAACTGTGAA+CGG | - | chr4.4:79607860-79607879 | None:intergenic | 35.0% | |
| ! | CGTGTGTTTGTTTAGTTTCA+TGG | + | chr4.4:79605774-79605793 | MS.gene50425:intron | 35.0% |
| ! | TTGCACTATGCTGCTTATTA+TGG | + | chr4.4:79606787-79606806 | MS.gene50425:CDS | 35.0% |
| !! | AACCGTTCAATGATTTTGAC+AGG | + | chr4.4:79606949-79606968 | MS.gene50425:intron | 35.0% |
| !! | ACCGTTCAATGATTTTGACA+GGG | + | chr4.4:79606950-79606969 | MS.gene50425:intron | 35.0% |
| !! | GAAGTGTTTTGTGATTGGTT+TGG | + | chr4.4:79605353-79605372 | MS.gene50425:intron | 35.0% |
| !! | TACATTTTGGAGGTTCAATG+AGG | + | chr4.4:79605718-79605737 | MS.gene50425:intron | 35.0% |
| !! | TAGTAAGGCGTTTTCCAATA+AGG | - | chr4.4:79607987-79608006 | None:intergenic | 35.0% |
| !! | TTGTGTTGATGATTGGTTAG+TGG | + | chr4.4:79606684-79606703 | MS.gene50425:intron | 35.0% |
| !! | TTTGTCATTGACTCTTGGTT+AGG | + | chr4.4:79606291-79606310 | MS.gene50425:intron | 35.0% |
| !!! | AGCGTCTTCCTTTGATTTTT+TGG | + | chr4.4:79608116-79608135 | MS.gene50425:intron | 35.0% |
| ACATATGTTTACTTACCCGG+AGG | - | chr4.4:79607306-79607325 | None:intergenic | 40.0% | |
| ACATGACACATCCATAGATG+GGG | - | chr4.4:79606896-79606915 | None:intergenic | 40.0% | |
| ACTAACCAAGAATCTGCAAC+AGG | - | chr4.4:79606859-79606878 | None:intergenic | 40.0% | |
| AGGACATTATGCAGATTTCC+TGG | + | chr4.4:79607188-79607207 | MS.gene50425:intron | 40.0% | |
| AGGCTTCAATTAGATTCCTC+CGG | + | chr4.4:79607287-79607306 | MS.gene50425:CDS | 40.0% | |
| AGTATGGTTGAGGATGATGT+TGG | + | chr4.4:79604958-79604977 | MS.gene50425:CDS | 40.0% | |
| CACATGACACATCCATAGAT+GGG | - | chr4.4:79606897-79606916 | None:intergenic | 40.0% | |
| CATAACCAACCATATGTACC+AGG | - | chr4.4:79605130-79605149 | None:intergenic | 40.0% | |
| CATAGACACACACCTGTTTA+TGG | - | chr4.4:79606366-79606385 | None:intergenic | 40.0% | |
| CCCCTGTCAAAATCATTGAA+CGG | - | chr4.4:79606954-79606973 | None:intergenic | 40.0% | |
| CGTTGTCTAATAGGGAATGA+AGG | - | chr4.4:79607058-79607077 | None:intergenic | 40.0% | |
| CTGGTGTTCCATATGTATCA+GGG | + | chr4.4:79605093-79605112 | MS.gene50425:intron | 40.0% | |
| CTTCTGATTAAAGACGTGTC+TGG | + | chr4.4:79605199-79605218 | MS.gene50425:intron | 40.0% | |
| GAGAGAAAAGGCCCTATTAA+AGG | + | chr4.4:79608021-79608040 | MS.gene50425:CDS | 40.0% | |
| GCATTAATAACAAGTGTGCC+TGG | - | chr4.4:79606080-79606099 | None:intergenic | 40.0% | |
| GGCACAACAAGAATCAGAAT+CGG | - | chr4.4:79606475-79606494 | None:intergenic | 40.0% | |
| GTTAGTGGTTACTCAATCAG+AGG | + | chr4.4:79606699-79606718 | MS.gene50425:intron | 40.0% | |
| TACGTTTGATACGTTGATCC+AGG | + | chr4.4:79606059-79606078 | MS.gene50425:intron | 40.0% | |
| TCACATGACACATCCATAGA+TGG | - | chr4.4:79606898-79606917 | None:intergenic | 40.0% | |
| TCATTCCCTATTAGACAACG+GGG | + | chr4.4:79607058-79607077 | MS.gene50425:CDS | 40.0% | |
| TCTCTAGACACCGTTAATGT+TGG | + | chr4.4:79606510-79606529 | MS.gene50425:intron | 40.0% | |
| TCTGGTGTTCCATATGTATC+AGG | + | chr4.4:79605092-79605111 | MS.gene50425:intron | 40.0% | |
| TGATATTGTCTCGGATTCTG+AGG | + | chr4.4:79608090-79608109 | MS.gene50425:CDS | 40.0% | |
| TGCATCACAGCCAACATTAA+CGG | - | chr4.4:79606523-79606542 | None:intergenic | 40.0% | |
| TGCTTTCAATGTTGTTGGAC+CGG | + | chr4.4:79606314-79606333 | MS.gene50425:CDS | 40.0% | |
| TGTCTTGAATCGCCATAAAC+AGG | + | chr4.4:79606351-79606370 | MS.gene50425:CDS | 40.0% | |
| TGTTCCATATGTATCAGGGT+CGG | + | chr4.4:79605097-79605116 | MS.gene50425:intron | 40.0% | |
| TTCAAGAGTTTGTCAGCCAT+TGG | + | chr4.4:79608513-79608532 | MS.gene50425:CDS | 40.0% | |
| TTGGAGGTTCAATGAGGTAA+TGG | + | chr4.4:79605724-79605743 | MS.gene50425:intron | 40.0% | |
| TTTGCTTCTGCTGTTGTGAA+TGG | + | chr4.4:79604916-79604935 | MS.gene50425:CDS | 40.0% | |
| ! | AATCAATCGAGTTGTGTGGT+GGG | + | chr4.4:79604862-79604881 | MS.gene50425:CDS | 40.0% |
| ! | CATATGGTTGGTTATCTTCC+TGG | + | chr4.4:79605173-79605192 | MS.gene50425:intron | 40.0% |
| ! | CTTGGTTAGTCACTCTTTCA+TGG | + | chr4.4:79606869-79606888 | MS.gene50425:intron | 40.0% |
| ! | GCACACATTTGATGATCACA+AGG | - | chr4.4:79608288-79608307 | None:intergenic | 40.0% |
| ! | TCAGAATCAATCGAGTTGTG+TGG | + | chr4.4:79604858-79604877 | MS.gene50425:CDS | 40.0% |
| ! | TTAATGTTGGCTGTGATGCA+TGG | + | chr4.4:79606523-79606542 | MS.gene50425:CDS | 40.0% |
| ! | TTTTAGTGGCTGTATAGCGT+TGG | + | chr4.4:79605599-79605618 | MS.gene50425:intron | 40.0% |
| !! | AGACATCGACTTTGACATTC+CGG | - | chr4.4:79606336-79606355 | None:intergenic | 40.0% |
| !! | CCGTTCAATGATTTTGACAG+GGG | + | chr4.4:79606951-79606970 | MS.gene50425:intron | 40.0% |
| !! | CGTTCAATGATTTTGACAGG+GGG | + | chr4.4:79606952-79606971 | MS.gene50425:intron | 40.0% |
| !! | GGTGTTTTGGATAGTACTGT+TGG | + | chr4.4:79604979-79604998 | MS.gene50425:CDS | 40.0% |
| !! | GTAGCGATTGTGTTGATGAT+TGG | + | chr4.4:79606677-79606696 | MS.gene50425:intron | 40.0% |
| !! | GTCTTTAATCAGAAGTGTCC+AGG | - | chr4.4:79605194-79605213 | None:intergenic | 40.0% |
| !! | TACTTGCTATCAGAACGTAG+TGG | - | chr4.4:79608067-79608086 | None:intergenic | 40.0% |
| !! | TGAGGATGATGTTGGTGTTT+TGG | + | chr4.4:79604966-79604985 | MS.gene50425:CDS | 40.0% |
| !! | TTACAGAAAGTGGCTCTAAG+CGG | + | chr4.4:79606194-79606213 | MS.gene50425:intron | 40.0% |
| !!! | CTTGACCTTCTTGGTTTTGT+TGG | - | chr4.4:79608462-79608481 | None:intergenic | 40.0% |
| AAACAAACACACGCTTGGAC+TGG | - | chr4.4:79605767-79605786 | None:intergenic | 45.0% | |
| AAGAACACCGCTACATATGG+CGG | + | chr4.4:79607211-79607230 | MS.gene50425:CDS | 45.0% | |
| AAGAGCCCCGTTGTCTAATA+GGG | - | chr4.4:79607066-79607085 | None:intergenic | 45.0% | |
| ACGCCTTACTAGAAGCTAAC+AGG | + | chr4.4:79607996-79608015 | MS.gene50425:CDS | 45.0% | |
| AGCTAACAGGGAGAGAGAAA+AGG | + | chr4.4:79608009-79608028 | MS.gene50425:CDS | 45.0% | |
| AGCTCGCTGATGAACTTTAG+CGG | - | chr4.4:79607947-79607966 | None:intergenic | 45.0% | |
| AGTTCCGACCCTGATACATA+TGG | - | chr4.4:79605229-79605248 | None:intergenic | 45.0% | |
| ATAAGCAGCATAGTGCAAGC+AGG | - | chr4.4:79606785-79606804 | None:intergenic | 45.0% | |
| ATATGTAGCGGTGTTCTTCC+AGG | - | chr4.4:79607209-79607228 | None:intergenic | 45.0% | |
| ATTTAGCAGCTGCCAATGGT+CGG | + | chr4.4:79605025-79605044 | MS.gene50425:CDS | 45.0% | |
| CCAGTCCAACAAAACCAAGA+AGG | + | chr4.4:79608454-79608473 | MS.gene50425:CDS | 45.0% | |
| CCTCGACAAAATGGACAAAC+TGG | - | chr4.4:79608375-79608394 | None:intergenic | 45.0% | |
| CGATTATTACCCGTATCCAC+CGG | - | chr4.4:79607102-79607121 | None:intergenic | 45.0% | |
| CGCCTTACTAGAAGCTAACA+GGG | + | chr4.4:79607997-79608016 | MS.gene50425:CDS | 45.0% | |
| CTGATGAACTTTAGCGGAGA+TGG | - | chr4.4:79607941-79607960 | None:intergenic | 45.0% | |
| CTGCCCCTGATAGATATTGT+TGG | + | chr4.4:79605247-79605266 | MS.gene50425:intron | 45.0% | |
| CTTCACCTGTTGCAGATTCT+TGG | + | chr4.4:79606851-79606870 | MS.gene50425:CDS | 45.0% | |
| CTTCATTTAGCAGCTGCCAA+TGG | + | chr4.4:79605021-79605040 | MS.gene50425:CDS | 45.0% | |
| CTTCTGATTGAAGACGTGTC+TGG | + | chr4.4:79605074-79605093 | MS.gene50425:intron | 45.0% | |
| GGCTTCAATTAGATTCCTCC+GGG | + | chr4.4:79607288-79607307 | MS.gene50425:CDS | 45.0% | |
| TCTTTCATGGTCCCCATCTA+TGG | + | chr4.4:79606882-79606901 | MS.gene50425:intron | 45.0% | |
| TGACCTCAATTGTGCACACT+TGG | - | chr4.4:79608263-79608282 | None:intergenic | 45.0% | |
| TGCTGTTGTGAATGGTGAGA+TGG | + | chr4.4:79604924-79604943 | MS.gene50425:CDS | 45.0% | |
| TGGAAGAACACCGCTACATA+TGG | + | chr4.4:79607208-79607227 | MS.gene50425:CDS | 45.0% | |
| TTGGCAGCTGCTAAATGAAG+AGG | - | chr4.4:79605021-79605040 | None:intergenic | 45.0% | |
| ! | ATCAATCGAGTTGTGTGGTG+GGG | + | chr4.4:79604863-79604882 | MS.gene50425:CDS | 45.0% |
| ! | CCAGTTTGTCCATTTTGTCG+AGG | + | chr4.4:79608372-79608391 | MS.gene50425:CDS | 45.0% |
| ! | CTCCCTGTTAGCTTCTAGTA+AGG | - | chr4.4:79608002-79608021 | None:intergenic | 45.0% |
| ! | GAATCAATCGAGTTGTGTGG+TGG | + | chr4.4:79604861-79604880 | MS.gene50425:CDS | 45.0% |
| ! | GCTCTTGTTTGTGCTTCAAC+CGG | + | chr4.4:79607080-79607099 | MS.gene50425:CDS | 45.0% |
| ! | TCAAGAAGCCAAGGCCTTAT+TGG | + | chr4.4:79607970-79607989 | MS.gene50425:CDS | 45.0% |
| ! | TCAGAACGTAGTGGAGATGA+AGG | - | chr4.4:79608058-79608077 | None:intergenic | 45.0% |
| !! | GCGGTTTGGAGTTAAGCTTT+TGG | + | chr4.4:79606213-79606232 | MS.gene50425:intron | 45.0% |
| !! | TTGTCAGCCATTGGCTCATT+CGG | + | chr4.4:79608522-79608541 | MS.gene50425:CDS | 45.0% |
| !!! | CCTTCTTGGTTTTGTTGGAC+TGG | - | chr4.4:79608457-79608476 | None:intergenic | 45.0% |
| AAATGGACAAACTGGTCCCG+TGG | - | chr4.4:79608367-79608386 | None:intergenic | 50.0% | |
| AACTACCTCGATCCGACCAT+TGG | - | chr4.4:79605040-79605059 | None:intergenic | 50.0% | |
| AAGAAGCCTGATCCTGCAAC+CGG | + | chr4.4:79608336-79608355 | MS.gene50425:CDS | 50.0% | |
| ACCTTGCTGCTCGTCATAGA+CGG | + | chr4.4:79607024-79607043 | MS.gene50425:CDS | 50.0% | |
| AGATGGCCAAACAAGAGGTG+CGG | - | chr4.4:79607924-79607943 | None:intergenic | 50.0% | |
| AGGATCGCTAGTCGCAATTC+AGG | + | chr4.4:79608546-79608565 | MS.gene50425:CDS | 50.0% | |
| AGGATGGCACCTCGACAAAA+TGG | - | chr4.4:79608384-79608403 | None:intergenic | 50.0% | |
| ATATGTATCAGGGTCGCGAC+CGG | + | chr4.4:79605103-79605122 | MS.gene50425:intron | 50.0% | |
| CAAGAGCCCCGTTGTCTAAT+AGG | - | chr4.4:79607067-79607086 | None:intergenic | 50.0% | |
| CGACCAAGTGTGCACAATTG+AGG | + | chr4.4:79608257-79608276 | MS.gene50425:CDS | 50.0% | |
| CGAGCTCAATCAAGAAGCCA+AGG | + | chr4.4:79607961-79607980 | MS.gene50425:CDS | 50.0% | |
| CGCTAGTCGCAATTCAGGAA+AGG | + | chr4.4:79608551-79608570 | MS.gene50425:CDS | 50.0% | |
| CTTGAGGCAGCATAGTGCTA+GGG | - | chr4.4:79608319-79608338 | None:intergenic | 50.0% | |
| CTTGTTTGTGCTTCAACCGG+TGG | + | chr4.4:79607083-79607102 | MS.gene50425:CDS | 50.0% | |
| GATCCTTCCGAATGAGCCAA+TGG | - | chr4.4:79608532-79608551 | None:intergenic | 50.0% | |
| GCTGTGATGCATGGAAAGAC+TGG | + | chr4.4:79606532-79606551 | MS.gene50425:CDS | 50.0% | |
| TCTTGAGGCAGCATAGTGCT+AGG | - | chr4.4:79608320-79608339 | None:intergenic | 50.0% | |
| TGTGCTTCAACCGGTGGATA+CGG | + | chr4.4:79607089-79607108 | MS.gene50425:CDS | 50.0% | |
| TTGCAGGATCAGGCTTCTTG+AGG | - | chr4.4:79608335-79608354 | None:intergenic | 50.0% | |
| ! | GCATGGAAAGACTGGTTGCA+TGG | + | chr4.4:79606540-79606559 | MS.gene50425:CDS | 50.0% |
| ! | GGCGTTTTCCAATAAGGCCT+TGG | - | chr4.4:79607981-79608000 | None:intergenic | 50.0% |
| ! | TCAATCGAGTTGTGTGGTGG+GGG | + | chr4.4:79604864-79604883 | MS.gene50425:CDS | 50.0% |
| !! | GAAAGTGGCTCTAAGCGGTT+TGG | + | chr4.4:79606199-79606218 | MS.gene50425:intron | 50.0% |
| AGCGGAGATGGCCAAACAAG+AGG | - | chr4.4:79607929-79607948 | None:intergenic | 55.0% | |
| CATCAGCCGCACCTCTTGTT+TGG | + | chr4.4:79607915-79607934 | MS.gene50425:CDS | 55.0% | |
| CCAACCATATGTACCAGGGC+CGG | - | chr4.4:79605125-79605144 | None:intergenic | 55.0% | |
| GGTCGCGACCCTGATACATA+TGG | - | chr4.4:79605104-79605123 | None:intergenic | 55.0% | |
| GTGCTTCAACCGGTGGATAC+GGG | + | chr4.4:79607090-79607109 | MS.gene50425:CDS | 55.0% | |
| TGCTTGCTTGGGGAGCAGAT+AGG | + | chr4.4:79607267-79607286 | MS.gene50425:CDS | 55.0% | |
| ! | AACAAGAGGTGCGGCTGATG+AGG | - | chr4.4:79607915-79607934 | None:intergenic | 55.0% |
| ! | ACAAGAGGTGCGGCTGATGA+GGG | - | chr4.4:79607914-79607933 | None:intergenic | 55.0% |
| ! | CAAACACACGCTTGGACTGG+CGG | - | chr4.4:79605764-79605783 | None:intergenic | 55.0% |
| ! | GTGGTTCTGTGGACTGTGTC+CGG | + | chr4.4:79607240-79607259 | MS.gene50425:CDS | 55.0% |
| ! | TGTCCGGATGCTGCTTGCTT+GGG | + | chr4.4:79607256-79607275 | MS.gene50425:CDS | 55.0% |
| !! | CAGCCATTGGCTCATTCGGA+AGG | + | chr4.4:79608526-79608545 | MS.gene50425:CDS | 55.0% |
| !! | GCTTGGACTGGCGGAAATCA+CGG | - | chr4.4:79605755-79605774 | None:intergenic | 55.0% |
| AACTGGTCCCGTGGTGCAAC+CGG | - | chr4.4:79608358-79608377 | None:intergenic | 60.0% | |
| AGCTGCCAATGGTCGGATCG+AGG | + | chr4.4:79605032-79605051 | MS.gene50425:CDS | 60.0% | |
| CCACGAGCCGCCATATGTAG+CGG | - | chr4.4:79607221-79607240 | None:intergenic | 60.0% | |
| CCGGCCCTGGTACATATGGT+TGG | + | chr4.4:79605122-79605141 | MS.gene50425:intron | 60.0% | |
| CTACATATGGCGGCTCGTGG+TGG | + | chr4.4:79607221-79607240 | MS.gene50425:CDS | 60.0% | |
| CTCCCCAAGCAAGCAGCATC+CGG | - | chr4.4:79607262-79607281 | None:intergenic | 60.0% | |
| GCCGTCTATGACGAGCAGCA+AGG | - | chr4.4:79607028-79607047 | None:intergenic | 60.0% | |
| GGCTGATGAGGGATCGAGCA+GGG | - | chr4.4:79607903-79607922 | None:intergenic | 60.0% | |
| GTGCAACCGGTTGCAGGATC+AGG | - | chr4.4:79608345-79608364 | None:intergenic | 60.0% | |
| TCCTGCAACCGGTTGCACCA+CGG | + | chr4.4:79608347-79608366 | MS.gene50425:CDS | 60.0% | |
| TGACGAGCAGCAAGGTGCAG+CGG | - | chr4.4:79607020-79607039 | None:intergenic | 60.0% | |
| ! | GTCCGGATGCTGCTTGCTTG+GGG | + | chr4.4:79607257-79607276 | MS.gene50425:CDS | 60.0% |
| ! | GTGTCCGGATGCTGCTTGCT+TGG | + | chr4.4:79607255-79607274 | MS.gene50425:CDS | 60.0% |
| CCGCTACATATGGCGGCTCG+TGG | + | chr4.4:79607218-79607237 | MS.gene50425:CDS | 65.0% | |
| CCTGCAACCGGTTGCACCAC+GGG | + | chr4.4:79608348-79608367 | MS.gene50425:CDS | 65.0% | |
| CGGCTGATGAGGGATCGAGC+AGG | - | chr4.4:79607904-79607923 | None:intergenic | 65.0% | |
| GCGACCGGCCCTGGTACATA+TGG | + | chr4.4:79605118-79605137 | MS.gene50425:intron | 65.0% | |
| AGCAGCAAGGTGCAGCGGCG+TGG | - | chr4.4:79607015-79607034 | None:intergenic | 70.0% | |
| CCCGTGGTGCAACCGGTTGC+AGG | - | chr4.4:79608351-79608370 | None:intergenic | 70.0% | |
| ! | GGCGGCTCGTGGTGGTTCTG+TGG | + | chr4.4:79607229-79607248 | MS.gene50425:CDS | 70.0% |
| ATCAGGGTCGCGACCGGCCC+TGG | + | chr4.4:79605109-79605128 | MS.gene50425:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 79604853 | 79608593 | 79604853 | ID=MS.gene50425 |
| chr4.4 | mRNA | 79604853 | 79608593 | 79604853 | ID=MS.gene50425.t1;Parent=MS.gene50425 |
| chr4.4 | exon | 79604853 | 79605053 | 79604853 | ID=MS.gene50425.t1.exon1;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79604853 | 79605053 | 79604853 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79606313 | 79606372 | 79606313 | ID=MS.gene50425.t1.exon2;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79606313 | 79606372 | 79606313 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79606517 | 79606588 | 79606517 | ID=MS.gene50425.t1.exon3;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79606517 | 79606588 | 79606517 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79606751 | 79606872 | 79606751 | ID=MS.gene50425.t1.exon4;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79606751 | 79606872 | 79606751 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79606971 | 79607111 | 79606971 | ID=MS.gene50425.t1.exon5;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79606971 | 79607111 | 79606971 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79607202 | 79607309 | 79607202 | ID=MS.gene50425.t1.exon6;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79607202 | 79607309 | 79607202 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79607850 | 79608111 | 79607850 | ID=MS.gene50425.t1.exon7;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79607850 | 79608111 | 79607850 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| chr4.4 | exon | 79608225 | 79608593 | 79608225 | ID=MS.gene50425.t1.exon8;Parent=MS.gene50425.t1 |
| chr4.4 | CDS | 79608225 | 79608593 | 79608225 | ID=cds.MS.gene50425.t1;Parent=MS.gene50425.t1 |
| Gene Sequence |
| Protein sequence |
