AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050499


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050499.t1 MTR_7g114520 93.261 460 30 1 2 460 3 462 0.0 897
MS.gene050499.t1 MTR_7g114550 77.826 460 101 1 1 460 1 459 0.0 764
MS.gene050499.t1 MTR_7g114560 77.391 460 103 1 1 460 1 459 0.0 759
MS.gene050499.t1 MTR_5g076700 76.304 460 109 0 1 460 1 460 0.0 741
MS.gene050499.t1 MTR_7g114470 73.261 460 122 1 2 460 3 462 0.0 715
MS.gene050499.t1 MTR_7g114490 76.959 434 99 1 1 434 1 433 0.0 711
MS.gene050499.t1 MTR_7g114510 90.127 314 31 0 147 460 7 320 0.0 597
MS.gene050499.t1 MTR_1g040195 54.292 466 168 8 6 460 5 436 6.15e-180 510
MS.gene050499.t1 MTR_1g040175 53.132 463 200 5 6 460 5 458 1.51e-176 503
MS.gene050499.t1 MTR_1g040215 52.573 447 206 6 6 449 5 448 2.93e-174 497
MS.gene050499.t1 MTR_1g081660 54.444 450 191 7 3 446 11 452 1.69e-166 477
MS.gene050499.t1 MTR_1g040320 50.885 452 170 6 6 449 5 412 7.76e-159 456
MS.gene050499.t1 MTR_1g040315 49.563 458 183 8 6 460 5 417 1.56e-148 430
MS.gene050499.t1 MTR_7g114420 68.136 295 67 1 166 460 1 268 1.77e-140 404
MS.gene050499.t1 MTR_0042s0190 52.431 288 130 5 168 452 3 286 1.86e-100 303
MS.gene050499.t1 MTR_7g114500 87.500 152 19 0 1 152 1 152 6.17e-92 275
MS.gene050499.t1 MTR_0502s0010 54.918 244 102 4 101 341 1 239 7.94e-85 260
MS.gene050499.t1 MTR_8g096530 34.419 430 263 10 14 438 11 426 8.41e-79 252
MS.gene050499.t1 MTR_0042s0190 54.545 220 96 4 233 449 1 219 4.70e-78 243
MS.gene050499.t1 MTR_3g098980 32.864 426 270 8 14 436 18 430 1.29e-77 248
MS.gene050499.t1 MTR_7g027175 32.870 432 263 9 14 436 20 433 3.20e-74 240
MS.gene050499.t1 MTR_3g051790 70.270 148 44 0 1 148 4 151 6.45e-69 218
MS.gene050499.t1 MTR_0042s0230 62.937 143 53 0 6 148 5 147 2.37e-61 197
MS.gene050499.t1 MTR_3g112180 32.405 395 238 13 13 393 14 393 6.69e-58 197
MS.gene050499.t1 MTR_1g053315 29.274 427 284 12 25 438 36 457 3.43e-53 185
MS.gene050499.t1 MTR_8g039950 62.903 124 46 0 6 129 5 128 4.52e-52 172
MS.gene050499.t1 MTR_4g055170 30.044 456 265 16 17 439 19 453 3.16e-51 180
MS.gene050499.t1 MTR_2g105330 29.630 432 278 13 17 436 10 427 1.19e-48 172
MS.gene050499.t1 MTR_4g007540 29.612 412 260 12 42 438 34 430 1.24e-48 172
MS.gene050499.t1 MTR_2g064495 29.398 432 279 13 17 436 10 427 1.73e-47 169
MS.gene050499.t1 MTR_8g075610 27.561 410 275 10 36 436 19 415 1.51e-44 161
MS.gene050499.t1 MTR_3g071320 29.820 389 255 10 17 393 12 394 2.03e-44 161
MS.gene050499.t1 MTR_3g035000 41.964 224 100 6 200 421 43 238 1.36e-43 155
MS.gene050499.t1 MTR_2g015430 28.605 430 279 14 31 445 25 441 1.03e-41 154
MS.gene050499.t1 MTR_7g110610 28.846 364 179 14 6 351 1 302 1.44e-38 144
MS.gene050499.t1 MTR_3g026950 27.632 456 272 16 18 434 10 446 7.24e-38 144
MS.gene050499.t1 MTR_7g085930 28.692 474 251 20 16 434 12 453 2.59e-37 142
MS.gene050499.t1 MTR_4g127650 28.169 426 267 12 36 434 35 448 3.95e-37 142
MS.gene050499.t1 MTR_4g097090 26.636 428 280 10 36 438 34 452 1.00e-35 137
MS.gene050499.t1 MTR_7g085990 26.752 471 286 19 16 443 8 462 1.31e-35 137
MS.gene050499.t1 MTR_3g465930 27.990 393 260 10 17 390 17 405 1.12e-34 135
MS.gene050499.t1 MTR_3g049150 26.991 452 277 18 18 436 10 441 8.51e-34 132
MS.gene050499.t1 MTR_3g465990 29.975 407 230 19 17 390 17 401 4.63e-33 130
MS.gene050499.t1 MTR_3g465980 30.597 402 234 17 17 390 17 401 8.11e-33 130
MS.gene050499.t1 MTR_3g465910 28.499 393 255 12 17 390 17 402 4.26e-32 129
MS.gene050499.t1 MTR_6g053810 26.980 404 258 17 64 441 70 462 6.96e-31 124
MS.gene050499.t1 MTR_3g465880 26.882 465 283 17 17 441 17 464 1.13e-30 124
MS.gene050499.t1 MTR_3g070170 26.761 426 262 13 53 441 54 466 8.04e-30 121
MS.gene050499.t1 MTR_3g465950 29.841 315 197 10 43 340 41 348 9.78e-30 121
MS.gene050499.t1 MTR_7g084940 24.937 397 281 10 2 391 8 394 9.79e-30 120
MS.gene050499.t1 MTR_5g090830 26.974 456 278 17 8 426 8 445 2.17e-29 120
MS.gene050499.t1 MTR_7g086000 24.703 421 255 18 62 439 57 458 2.83e-29 120
MS.gene050499.t1 MTR_5g090810 26.535 456 280 17 8 426 8 445 7.60e-29 119
MS.gene050499.t1 MTR_7g084910 25.581 387 253 12 14 391 21 381 2.54e-28 116
MS.gene050499.t1 MTR_3g450690 25.735 408 264 11 62 442 69 464 1.76e-25 108
MS.gene050499.t1 MTR_7g056087 24.201 438 273 14 17 422 11 421 3.37e-25 107
MS.gene050499.t1 MTR_5g090880 25.728 412 263 13 62 442 64 463 1.32e-24 106
MS.gene050499.t1 MTR_3g450710 24.943 437 272 13 43 442 43 460 2.23e-24 105
MS.gene050499.t1 MTR_3g101900 27.854 438 250 22 37 444 44 445 2.36e-24 105
MS.gene050499.t1 MTR_4g013050 25.664 452 259 17 20 448 14 411 8.40e-24 103
MS.gene050499.t1 MTR_3g101930 28.224 411 242 21 62 444 67 452 4.91e-23 101
MS.gene050499.t1 MTR_3g465870 29.268 287 179 10 17 287 19 297 5.42e-23 101
MS.gene050499.t1 MTR_3g051820 63.043 92 32 2 370 460 1 91 9.70e-23 92.4
MS.gene050499.t1 MTR_8g041770 25.061 411 262 15 13 404 20 403 1.03e-21 97.4
MS.gene050499.t1 MTR_5g084870 23.608 449 280 20 16 439 9 419 2.35e-21 96.7
MS.gene050499.t1 MTR_5g026320 26.010 396 247 16 22 394 32 404 2.47e-21 96.7
MS.gene050499.t1 MTR_3g086020 23.799 437 282 17 16 439 11 409 1.91e-20 93.6
MS.gene050499.t1 MTR_3g088420 26.410 390 235 18 24 390 25 385 2.67e-20 93.2
MS.gene050499.t1 MTR_4g094838 23.762 404 247 13 24 404 29 394 5.56e-20 92.4
MS.gene050499.t1 MTR_1g094790 22.459 423 278 14 16 409 9 410 2.05e-19 90.9
MS.gene050499.t1 MTR_3g102020 26.174 447 276 21 25 445 31 449 2.60e-19 90.5
MS.gene050499.t1 MTR_3g101960 27.093 454 260 22 24 443 30 446 3.65e-19 90.1
MS.gene050499.t1 MTR_7g114417 70.909 55 15 1 90 143 29 83 4.58e-19 82.0
MS.gene050499.t1 MTR_7g114417 88.095 42 5 0 1 42 1 42 1.14e-17 78.2
MS.gene050499.t1 MTR_8g079950 22.391 460 304 15 16 452 9 438 3.92e-18 87.0
MS.gene050499.t1 MTR_3g102010 25.277 451 274 21 25 445 32 449 8.58e-18 85.9
MS.gene050499.t1 MTR_4g022825 23.650 389 254 15 24 390 25 392 9.63e-18 85.5
MS.gene050499.t1 MTR_5g084850 27.083 240 155 8 16 252 9 231 1.01e-17 85.5
MS.gene050499.t1 MTR_4g088765 49.333 75 38 0 6 80 5 79 7.78e-17 76.6
MS.gene050499.t1 MTR_3g026310 27.019 322 195 13 24 324 25 327 2.36e-16 81.3
MS.gene050499.t1 MTR_8g467590 23.077 403 259 14 16 391 9 387 4.14e-16 80.9
MS.gene050499.t1 MTR_4g022670 23.136 389 257 15 24 390 25 393 4.42e-16 80.5
MS.gene050499.t1 MTR_7g026860 24.873 394 254 17 24 398 25 395 8.05e-16 79.7
MS.gene050499.t1 MTR_8g079710 23.000 400 257 16 24 400 30 401 1.53e-15 79.0
MS.gene050499.t1 MTR_8g079970 22.707 458 303 16 16 451 9 437 2.82e-15 78.2
MS.gene050499.t1 MTR_4g094832 23.881 335 211 13 95 408 85 396 6.52e-15 77.0
MS.gene050499.t1 MTR_2g036780 29.787 141 96 1 49 189 50 187 2.67e-14 75.1
MS.gene050499.t1 MTR_3g100150 28.369 141 98 1 49 189 49 186 1.54e-13 72.8
MS.gene050499.t1 MTR_6g016815 25.417 240 155 10 52 281 57 282 8.46e-13 70.1
MS.gene050499.t1 MTR_4g007460 31.159 138 85 3 79 216 1 128 1.78e-12 65.5
MS.gene050499.t1 MTR_7g026850 27.389 157 93 7 36 185 20 162 9.69e-12 63.9
MS.gene050499.t1 MTR_1g035890 23.427 286 158 10 49 306 51 303 6.39e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050499.t1 AT5G17540 47.109 467 231 9 3 460 2 461 1.11e-144 422
MS.gene050499.t1 AT3G03480 44.667 450 231 9 2 443 11 450 3.82e-129 382
MS.gene050499.t1 AT3G48720 30.664 437 287 9 8 441 7 430 5.00e-71 231
MS.gene050499.t1 AT5G41040 32.715 431 271 10 14 438 21 438 2.44e-70 230
MS.gene050499.t1 AT5G41040 32.715 431 271 10 14 438 37 454 3.14e-70 230
MS.gene050499.t1 AT5G63560 30.942 446 280 10 1 439 1 425 6.04e-67 221
MS.gene050499.t1 AT1G27620 30.858 431 266 12 14 434 13 421 2.17e-56 193
MS.gene050499.t1 AT5G48930 29.639 415 258 11 41 438 33 430 1.70e-49 175
MS.gene050499.t1 AT1G03390 29.792 433 267 13 14 426 26 441 1.08e-48 173
MS.gene050499.t1 AT2G19070 30.023 433 259 14 36 438 29 447 1.76e-46 167
MS.gene050499.t1 AT1G28680 27.700 426 284 14 31 441 27 443 3.38e-43 158
MS.gene050499.t1 AT5G57840 28.784 403 252 12 11 391 4 393 5.99e-41 152
MS.gene050499.t1 AT3G62160 28.774 424 247 14 6 403 1 395 7.39e-40 149
MS.gene050499.t1 AT1G28680 29.167 336 226 10 31 360 27 356 2.87e-39 146
MS.gene050499.t1 AT2G40230 29.040 396 249 15 17 395 12 392 5.05e-39 146
MS.gene050499.t1 AT5G07080 27.533 454 292 14 8 441 12 448 2.65e-38 145
MS.gene050499.t1 AT3G47170 25.996 477 291 16 8 442 10 466 3.81e-36 139
MS.gene050499.t1 AT1G65450 27.456 397 248 13 17 392 26 403 2.63e-33 131
MS.gene050499.t1 AT2G25150 24.838 463 296 17 16 446 19 461 2.25e-29 120
MS.gene050499.t1 AT1G32910 26.750 400 251 15 63 437 63 445 2.00e-27 114
MS.gene050499.t1 AT1G78990 25.301 415 270 12 43 437 45 439 6.98e-27 112
MS.gene050499.t1 AT1G31490 25.260 384 243 11 31 394 29 388 1.60e-26 111
MS.gene050499.t1 AT4G31910 26.304 441 285 17 26 438 27 455 2.46e-26 111
MS.gene050499.t1 AT2G23510 25.686 401 251 15 16 390 19 398 9.25e-25 106
MS.gene050499.t1 AT5G16410 24.745 392 259 12 65 437 91 465 2.26e-24 105
MS.gene050499.t1 AT3G26040 23.043 460 301 13 16 453 9 437 1.44e-23 103
MS.gene050499.t1 AT4G15390 24.550 444 285 18 16 436 14 430 6.12e-23 101
MS.gene050499.t1 AT4G15390 24.550 444 285 18 16 436 14 430 6.12e-23 101
MS.gene050499.t1 AT5G42830 27.430 463 268 20 14 442 16 444 9.18e-23 100
MS.gene050499.t1 AT1G24430 25.476 420 248 15 44 438 41 420 4.19e-22 98.6
MS.gene050499.t1 AT5G67150 24.500 400 253 15 24 400 30 403 1.44e-20 94.4
MS.gene050499.t1 AT1G24420 27.438 441 265 17 16 434 11 418 4.98e-20 92.4
MS.gene050499.t1 AT1G24420 27.438 441 265 17 16 434 11 418 4.98e-20 92.4
MS.gene050499.t1 AT5G07860 25.874 429 266 14 37 442 45 444 1.08e-19 91.7
MS.gene050499.t1 AT2G39980 23.684 418 255 12 65 431 62 466 1.63e-18 88.2
MS.gene050499.t1 AT3G30280 23.023 430 285 16 16 423 12 417 3.34e-18 87.0
MS.gene050499.t1 AT5G07870 24.622 463 294 15 13 442 16 456 5.95e-18 86.7
MS.gene050499.t1 AT5G23940 27.094 406 258 18 53 436 54 443 8.70e-18 86.3
MS.gene050499.t1 AT3G50300 25.000 368 233 15 62 402 56 407 2.10e-17 84.7
MS.gene050499.t1 AT5G07850 25.990 404 254 19 62 442 67 448 5.63e-17 83.6
MS.gene050499.t1 AT5G67160 25.840 387 254 14 19 390 15 383 9.39e-17 82.8
MS.gene050499.t1 AT3G50270 24.485 388 253 14 24 390 30 398 1.08e-16 82.4
MS.gene050499.t1 AT5G23970 25.313 399 242 16 16 391 9 374 2.43e-16 81.3
MS.gene050499.t1 AT5G47950 22.558 430 270 17 16 423 12 400 2.25e-14 75.1
MS.gene050499.t1 AT3G23840 23.887 247 156 6 39 272 36 263 2.98e-14 74.7
MS.gene050499.t1 AT4G15400 26.067 445 271 22 16 437 11 420 5.85e-12 67.8
MS.gene050499.t1 AT4G13840 27.333 150 104 2 39 185 38 185 4.59e-11 65.1
MS.gene050499.t1 AT5G01210 22.637 402 260 15 79 441 76 465 5.86e-11 64.7

Find 117 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCGTTGTAGGTTGATTT+TGG 0.190745 7.2:+2918964 None:intergenic
GGCAGATCTTATGGTTATTA+AGG 0.197032 7.2:-2919243 MS.gene050499:CDS
ATCCACTTGCGGGAAGAATT+AGG 0.214730 7.2:-2921065 MS.gene050499:CDS
TCGCCACTTGATGGATATTA+TGG 0.235022 7.2:-2919392 MS.gene050499:CDS
TTAATGCACGTTCAAGGTTT+AGG 0.237256 7.2:-2919424 MS.gene050499:CDS
GCATTCTTTGGCAGATCTTA+TGG 0.245241 7.2:-2919252 MS.gene050499:CDS
AAGTACTCAGAAGTAAATTT+TGG 0.247575 7.2:-2919164 MS.gene050499:CDS
GCACATTTAAGAACCTTAAC+AGG 0.260011 7.2:+2921114 None:intergenic
TAATGCACGTTCAAGGTTTA+GGG 0.290580 7.2:-2919423 MS.gene050499:CDS
AGAAGAATACATGCATTCTT+TGG 0.294021 7.2:-2919264 MS.gene050499:CDS
GTGTATGGTGGAGTGGTAAA+AGG 0.301086 7.2:-2919128 MS.gene050499:CDS
AAGCTTTGCGGAAACCCTTT+AGG 0.345123 7.2:-2919329 MS.gene050499:CDS
ATCATTTGTACTTCTTCATC+TGG 0.345335 7.2:+2919455 None:intergenic
TGAAACAATTCATGAATGTA+TGG 0.347707 7.2:-2919781 MS.gene050499:CDS
TAACGATAGATAAATATAAT+AGG 0.351117 7.2:+2921162 None:intergenic
GGGTCTTTCTCTACCATTGA+TGG 0.358439 7.2:+2921135 None:intergenic
GTTTCATTGTGGGCGTAAAC+TGG 0.359119 7.2:-2919832 MS.gene050499:CDS
GAACATCGTATATGAGTTCT+TGG 0.374329 7.2:+2920920 None:intergenic
GGATGGGGTGAGGCGGTGTA+TGG 0.375232 7.2:-2919143 MS.gene050499:CDS
ATGGAACATCACAAACTATA+AGG 0.375658 7.2:+2918920 None:intergenic
TCCACTTGCGGGAAGAATTA+GGG 0.384194 7.2:-2921064 MS.gene050499:CDS
GAAGAAAGATTGATGGACTA+TGG 0.390074 7.2:+2919601 None:intergenic
CATGAATGTATGGGCAGAAA+TGG 0.391377 7.2:-2919771 MS.gene050499:CDS
CCTGCGGTGGTGACAGCAGC+CGG 0.395402 7.2:+2919353 None:intergenic
GCTAACCATTCGCCACTTGA+TGG 0.395994 7.2:-2919401 MS.gene050499:CDS
GATGTAACACTTGATGAATT+TGG 0.399157 7.2:-2920973 MS.gene050499:CDS
CATGCAATTGGCGATGCAAC+AGG 0.403226 7.2:-2919806 MS.gene050499:CDS
AACCTTCCATTCAACCAGTA+TGG 0.403496 7.2:-2919733 MS.gene050499:CDS
TCAATAATTTGTTTCGTGCC+TGG 0.413381 7.2:+2920898 None:intergenic
TGGGGTGAGGCGGTGTATGG+TGG 0.423405 7.2:-2919140 MS.gene050499:CDS
TTTCCACTGCATAACCTAAA+GGG 0.424654 7.2:+2919315 None:intergenic
GAAGAGTTAGATAAGATGTT+TGG 0.426938 7.2:-2918990 MS.gene050499:CDS
AAGTGTGGTGGTTTCATTGT+GGG 0.430933 7.2:-2919842 MS.gene050499:CDS
GTTTATTACTATCCACTTGC+GGG 0.432351 7.2:-2921075 MS.gene050499:CDS
TCTTCCTTGTTGATATTTGA+CGG 0.432691 7.2:+2919638 None:intergenic
TCATCCTATTCTGTTCATAC+AGG 0.434182 7.2:-2920875 MS.gene050499:intron
TATTTGACGGAAGTATTTGT+TGG 0.434903 7.2:+2919651 None:intergenic
GTTCTTGGAAGCAAGGGAAT+GGG 0.437641 7.2:+2920935 None:intergenic
CCGGCTGCTGTCACCACCGC+AGG 0.437909 7.2:-2919353 MS.gene050499:CDS
GAAGAATTAGGGAGGGAGCT+AGG 0.442327 7.2:-2921053 MS.gene050499:CDS
CTGCATTGACGAAGGTGAAA+TGG 0.446524 7.2:+2919539 None:intergenic
GTGTAAAGAAGAAAGATTGA+TGG 0.448040 7.2:+2919594 None:intergenic
GCGGAGGGTCTCTTGCCATT+AGG 0.455363 7.2:+2919699 None:intergenic
AAACTAGGACCAATCGTTGT+AGG 0.458464 7.2:+2918954 None:intergenic
GCATCGTTAATGCACGTTCA+AGG 0.459702 7.2:-2919430 MS.gene050499:CDS
ATTTCCACTGCATAACCTAA+AGG 0.460925 7.2:+2919314 None:intergenic
GGGAGCTAGGGACAAGTTGA+TGG 0.473590 7.2:-2921040 MS.gene050499:CDS
AAAGCTGGTGGCACCAACTC+TGG 0.474806 7.2:+2921252 None:intergenic
AGTTCTTGGAAGCAAGGGAA+TGG 0.482681 7.2:+2920934 None:intergenic
ATCCCACATAAGAATGCAAA+AGG 0.484239 7.2:-2919071 MS.gene050499:CDS
AAGAATTAGGGAGGGAGCTA+GGG 0.488281 7.2:-2921052 MS.gene050499:CDS
GAACTCATATACGATGTTCC+AGG 0.488751 7.2:-2920916 MS.gene050499:CDS
AGGATCTCTCTGCGCCATAC+TGG 0.495159 7.2:+2919719 None:intergenic
GTAAACTGGAACCATGCAAT+TGG 0.495199 7.2:-2919818 MS.gene050499:CDS
GGTGGGGCTGGACCTTTACC+TGG 0.499401 7.2:-2919107 MS.gene050499:CDS
TCCGCAAAGCTTCCCTGCGG+TGG 0.499603 7.2:+2919340 None:intergenic
TCTGCGCCATACTGGTTGAA+TGG 0.499989 7.2:+2919727 None:intergenic
AGTTTAACTTCGCGAGGAGT+GGG 0.506066 7.2:+2921228 None:intergenic
TCCCTAATTCTTCCCGCAAG+TGG 0.509710 7.2:+2921063 None:intergenic
GGAGTGGTAAAAGGTGGGGC+TGG 0.515635 7.2:-2919119 MS.gene050499:CDS
ACCACCGCAGGGAAGCTTTG+CGG 0.519285 7.2:-2919341 MS.gene050499:CDS
CTATCGTTACGAACCATCAA+TGG 0.520395 7.2:-2921148 MS.gene050499:CDS
ATGGTGGAGTGGTAAAAGGT+GGG 0.522041 7.2:-2919124 MS.gene050499:CDS
CAAAATCAACCTACAACGAT+TGG 0.525230 7.2:-2918963 MS.gene050499:CDS
TCGCGAGGAGTGGGTAAAGC+TGG 0.526362 7.2:+2921237 None:intergenic
TAGTTTAACTTCGCGAGGAG+TGG 0.531895 7.2:+2921227 None:intergenic
GAAACAATTCATGAATGTAT+GGG 0.532109 7.2:-2919780 MS.gene050499:CDS
TGAACCTGTATGAACAGAAT+AGG 0.541680 7.2:+2920871 None:intergenic
AAGAATGCAAAAGGAGGAGA+AGG 0.542764 7.2:-2919062 MS.gene050499:CDS
CGCCATACTGGTTGAATGGA+AGG 0.543769 7.2:+2919731 None:intergenic
TTCTTGGAAGCAAGGGAATG+GGG 0.544018 7.2:+2920936 None:intergenic
ATATACGTAGCTCCAGGTAA+AGG 0.544205 7.2:+2919095 None:intergenic
TGTTTATTACTATCCACTTG+CGG 0.545893 7.2:-2921076 MS.gene050499:CDS
GGTAGAGAAAGACCCTGTTA+AGG 0.553972 7.2:-2921127 MS.gene050499:CDS
ATGGTGGATTGTACTGGTGA+AGG 0.555043 7.2:-2921021 MS.gene050499:CDS
TATATGAGTTCTTGGAAGCA+AGG 0.556792 7.2:+2920928 None:intergenic
CTGCGGTGGTGACAGCAGCC+GGG 0.558615 7.2:+2919354 None:intergenic
GCGGAGGTGCCAACCAGAGT+TGG 0.564737 7.2:-2921265 MS.gene050499:CDS
TGAGGCGGTGTATGGTGGAG+TGG 0.570853 7.2:-2919135 MS.gene050499:CDS
CTGTTGCATCGCCAATTGCA+TGG 0.571678 7.2:+2919807 None:intergenic
CTGGTGGCACCAACTCTGGT+TGG 0.572358 7.2:+2921256 None:intergenic
GATAATAGTTTAACTTCGCG+AGG 0.573152 7.2:+2921222 None:intergenic
TATGGTGGAGTGGTAAAAGG+TGG 0.581935 7.2:-2919125 MS.gene050499:CDS
TAACCTCTGAAGTTATGAAG+AGG 0.583920 7.2:-2919019 MS.gene050499:CDS
AAGGTAGAGATAACAAAACT+AGG 0.584883 7.2:+2918939 None:intergenic
GGTTGCAAGTAATGCGCGGA+GGG 0.591291 7.2:+2919684 None:intergenic
GGGATTATATACGTAGCTCC+AGG 0.593500 7.2:+2919089 None:intergenic
ATGGCGCAGAGAGATCCTAA+TGG 0.598701 7.2:-2919714 MS.gene050499:CDS
AAACCTCTTCATAACTTCAG+AGG 0.602162 7.2:+2919016 None:intergenic
TCTGACATAGATGATCAAGA+AGG 0.602444 7.2:-2921201 MS.gene050499:CDS
ATATGAGTTCTTGGAAGCAA+GGG 0.602607 7.2:+2920929 None:intergenic
AAGTTGATGGTGGATTGTAC+TGG 0.603417 7.2:-2921027 MS.gene050499:CDS
CAAGTGTGGTGGTTTCATTG+TGG 0.611937 7.2:-2919843 MS.gene050499:CDS
TTACCATAATATCCATCAAG+TGG 0.613197 7.2:+2919389 None:intergenic
TCTTGGAAGCAAGGGAATGG+GGG 0.616445 7.2:+2920937 None:intergenic
AATATCCATCAAGTGGCGAA+TGG 0.617318 7.2:+2919396 None:intergenic
CGAGGAGTGGGTAAAGCTGG+TGG 0.619470 7.2:+2921240 None:intergenic
AAACCCTTTAGGTTATGCAG+TGG 0.626639 7.2:-2919318 MS.gene050499:CDS
AGCTAGGGACAAGTTGATGG+TGG 0.631233 7.2:-2921037 MS.gene050499:CDS
CCACATAAGAATGCAAAAGG+AGG 0.632833 7.2:-2919068 MS.gene050499:CDS
CGGCTGCTGTCACCACCGCA+GGG 0.632979 7.2:-2919352 MS.gene050499:CDS
GTATTTGTTGGTATTCACGA+TGG 0.633823 7.2:+2919663 None:intergenic
TGGTGGAGTGGTAAAAGGTG+GGG 0.634490 7.2:-2919123 MS.gene050499:CDS
CACATTTAAGAACCTTAACA+GGG 0.639455 7.2:+2921115 None:intergenic
CGAATTGCAGCTATGTGAGA+AGG 0.642140 7.2:+2919572 None:intergenic
CAGATCACACGTCTCAAGTG+TGG 0.657117 7.2:-2919857 MS.gene050499:CDS
CAAATGTACTGCATTGACGA+AGG 0.667868 7.2:+2919531 None:intergenic
ATCACACGTCTCAAGTGTGG+TGG 0.671401 7.2:-2919854 MS.gene050499:CDS
TGTTAATGTTCACAGCGCGG+AGG 0.678502 7.2:-2921281 MS.gene050499:CDS
ACTTGCGGGAAGAATTAGGG+AGG 0.685706 7.2:-2921061 MS.gene050499:CDS
CTTGCGGGAAGAATTAGGGA+GGG 0.687102 7.2:-2921060 MS.gene050499:CDS
CGATGGTTGCAAGTAATGCG+CGG 0.689910 7.2:+2919680 None:intergenic
ACTTCCGTCAAATATCAACA+AGG 0.705210 7.2:-2919642 MS.gene050499:CDS
TGGTTGCAAGTAATGCGCGG+AGG 0.705557 7.2:+2919683 None:intergenic
GTATGGGCAGAAATGGCTCG+AGG 0.708290 7.2:-2919764 MS.gene050499:CDS
GTTTCCGCAAAGCTTCCCTG+CGG 0.715488 7.2:+2919337 None:intergenic
CATTGTTAATGTTCACAGCG+CGG 0.734245 7.2:-2921284 MS.gene050499:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAAAAAAAACAT+AGG + chr7.2:2919573-2919592 None:intergenic 10.0%
!! AAAATTAAAATTTAAAAGCA+AGG + chr7.2:2919487-2919506 None:intergenic 10.0%
!! AAATGATTTAATCTATTATA+TGG - chr7.2:2920123-2920142 MS.gene050499:intron 10.0%
!! GAAATTAGAATAATAATTAA+AGG - chr7.2:2919923-2919942 MS.gene050499:intron 10.0%
!! ATATGTATATGAAAACATAA+AGG + chr7.2:2919966-2919985 None:intergenic 15.0%
!! TAACGATAGATAAATATAAT+AGG + chr7.2:2919070-2919089 None:intergenic 15.0%
!! TTTGACAGAAAATTAATTAT+GGG - chr7.2:2919643-2919662 MS.gene050499:CDS 15.0%
!!! AACAAATATTTCTTTTGTTT+TGG + chr7.2:2919890-2919909 None:intergenic 15.0%
!!! TAAATCTATGAAATTAGTTT+AGG + chr7.2:2919789-2919808 None:intergenic 15.0%
!!! TAATTTTCTTTAATCATTGA+CGG + chr7.2:2919691-2919710 None:intergenic 15.0%
!!! TTTTGACAGAAAATTAATTA+TGG - chr7.2:2919642-2919661 MS.gene050499:CDS 15.0%
!! AAGAAAAAAAAAACATAGGT+TGG + chr7.2:2919569-2919588 None:intergenic 20.0%
!!! ATCATTGATTTGAAATTCAA+AGG - chr7.2:2920015-2920034 MS.gene050499:intron 20.0%
!!! TTTTTCCAAAAAATAGTAGT+TGG - chr7.2:2919588-2919607 MS.gene050499:CDS 20.0%
! AAATTAATTATGGGTAGAGA+CGG - chr7.2:2919652-2919671 MS.gene050499:CDS 25.0%
! ATCAAAAAAGAAAGTTCATG+TGG + chr7.2:2920245-2920264 None:intergenic 25.0%
! GAAACAATTCATGAATGTAT+GGG - chr7.2:2920449-2920468 MS.gene050499:intron 25.0%
! TATTGTTTGGTATGAGATTA+AGG + chr7.2:2920159-2920178 None:intergenic 25.0%
! TGAAACAATTCATGAATGTA+TGG - chr7.2:2920448-2920467 MS.gene050499:intron 25.0%
! TTCTATGAACATAGAAAGAA+AGG + chr7.2:2920188-2920207 None:intergenic 25.0%
!! AAGTACTCAGAAGTAAATTT+TGG - chr7.2:2921065-2921084 MS.gene050499:CDS 25.0%
!!! ATTGTTATTGCCTACAATTT+TGG - chr7.2:2919527-2919546 MS.gene050499:CDS 25.0%
!!! CACATACAGTTAGTTATTTT+AGG - chr7.2:2919744-2919763 MS.gene050499:CDS 25.0%
AAGGTAGAGATAACAAAACT+AGG + chr7.2:2921293-2921312 None:intergenic 30.0%
AGAAAGGCAAGTATATTGTT+TGG + chr7.2:2920172-2920191 None:intergenic 30.0%
AGAAGAATACATGCATTCTT+TGG - chr7.2:2920965-2920984 MS.gene050499:CDS 30.0%
ATCACATATACCAAACTGAT+TGG - chr7.2:2920298-2920317 MS.gene050499:intron 30.0%
ATCATTTGTACTTCTTCATC+TGG + chr7.2:2920777-2920796 None:intergenic 30.0%
CACAACTTTATGGACAAAAA+TGG + chr7.2:2919445-2919464 None:intergenic 30.0%
CACATTTAAGAACCTTAACA+GGG + chr7.2:2919117-2919136 None:intergenic 30.0%
GAAGAGTTAGATAAGATGTT+TGG - chr7.2:2921239-2921258 MS.gene050499:CDS 30.0%
GATGTAACACTTGATGAATT+TGG - chr7.2:2919256-2919275 MS.gene050499:CDS 30.0%
GTGTAAAGAAGAAAGATTGA+TGG + chr7.2:2920638-2920657 None:intergenic 30.0%
TAACATGTAGAAAGTTCATG+TGG + chr7.2:2920274-2920293 None:intergenic 30.0%
TCCAAAAAATAGTAGTTGGA+AGG - chr7.2:2919592-2919611 MS.gene050499:CDS 30.0%
TCTTCCTTGTTGATATTTGA+CGG + chr7.2:2920594-2920613 None:intergenic 30.0%
TGTTTATTACTATCCACTTG+CGG - chr7.2:2919153-2919172 MS.gene050499:CDS 30.0%
TTACCATAATATCCATCAAG+TGG + chr7.2:2920843-2920862 None:intergenic 30.0%
! ACTCAGAAGTAAATTTTGGA+TGG - chr7.2:2921069-2921088 MS.gene050499:CDS 30.0%
! ATCTTATCACTGCATGTTTT+TGG - chr7.2:2920721-2920740 MS.gene050499:intron 30.0%
! CTCAGAAGTAAATTTTGGAT+GGG - chr7.2:2921070-2921089 MS.gene050499:CDS 30.0%
! TCAGAAGTAAATTTTGGATG+GGG - chr7.2:2921071-2921090 MS.gene050499:CDS 30.0%
!! TATTTGACGGAAGTATTTGT+TGG + chr7.2:2920581-2920600 None:intergenic 30.0%
AAACCTCTTCATAACTTCAG+AGG + chr7.2:2921216-2921235 None:intergenic 35.0%
AACCTAGTCTCCAAAATTGT+AGG + chr7.2:2919540-2919559 None:intergenic 35.0%
ACTCAAATGAGTCTCACTAA+AGG + chr7.2:2920043-2920062 None:intergenic 35.0%
ACTTCCGTCAAATATCAACA+AGG - chr7.2:2920587-2920606 MS.gene050499:intron 35.0%
ATATGAGTTCTTGGAAGCAA+GGG + chr7.2:2919303-2919322 None:intergenic 35.0%
ATCCCACATAAGAATGCAAA+AGG - chr7.2:2921158-2921177 MS.gene050499:CDS 35.0%
ATTTCCACTGCATAACCTAA+AGG + chr7.2:2920918-2920937 None:intergenic 35.0%
CAAAATCAACCTACAACGAT+TGG - chr7.2:2921266-2921285 MS.gene050499:CDS 35.0%
GAACATCGTATATGAGTTCT+TGG + chr7.2:2919312-2919331 None:intergenic 35.0%
GCACATTTAAGAACCTTAAC+AGG + chr7.2:2919118-2919137 None:intergenic 35.0%
GGCAGATCTTATGGTTATTA+AGG - chr7.2:2920986-2921005 MS.gene050499:CDS 35.0%
GTTTATTACTATCCACTTGC+GGG - chr7.2:2919154-2919173 MS.gene050499:CDS 35.0%
TAATGCACGTTCAAGGTTTA+GGG - chr7.2:2920806-2920825 MS.gene050499:intron 35.0%
TATACCAAACTGATTGGATC+AGG - chr7.2:2920304-2920323 MS.gene050499:intron 35.0%
TATATGAGTTCTTGGAAGCA+AGG + chr7.2:2919304-2919323 None:intergenic 35.0%
TCATCCTATTCTGTTCATAC+AGG - chr7.2:2919354-2919373 MS.gene050499:CDS 35.0%
TCTGACATAGATGATCAAGA+AGG - chr7.2:2919028-2919047 MS.gene050499:CDS 35.0%
TGAACCTGTATGAACAGAAT+AGG + chr7.2:2919361-2919380 None:intergenic 35.0%
TGGTGATTAAGTCAAAAGTG+TGG + chr7.2:2919425-2919444 None:intergenic 35.0%
TTAATGCACGTTCAAGGTTT+AGG - chr7.2:2920805-2920824 MS.gene050499:intron 35.0%
TTGTCTGAGTCACAACTTTA+TGG + chr7.2:2919455-2919474 None:intergenic 35.0%
TTTCCACTGCATAACCTAAA+GGG + chr7.2:2920917-2920936 None:intergenic 35.0%
! AATTTTGCCTCTCAACTAAC+AGG - chr7.2:2919825-2919844 MS.gene050499:CDS 35.0%
! ATTAAGTCAAAAGTGTGGCT+AGG + chr7.2:2919420-2919439 None:intergenic 35.0%
! CTCCTTTTGCATTCTTATGT+GGG + chr7.2:2921163-2921182 None:intergenic 35.0%
! GATAATAGTTTAACTTCGCG+AGG + chr7.2:2919010-2919029 None:intergenic 35.0%
! GTATTTGTTGGTATTCACGA+TGG + chr7.2:2920569-2920588 None:intergenic 35.0%
! TCTCATCCTTAATGTTTTGC+TGG - chr7.2:2919394-2919413 MS.gene050499:CDS 35.0%
!! GAAGAAAGATTGATGGACTA+TGG + chr7.2:2920631-2920650 None:intergenic 35.0%
!! TAACCTCTGAAGTTATGAAG+AGG - chr7.2:2921210-2921229 MS.gene050499:CDS 35.0%
!! TCAATAATTTGTTTCGTGCC+TGG + chr7.2:2919334-2919353 None:intergenic 35.0%
!!! CAATCGTTGTAGGTTGATTT+TGG + chr7.2:2921268-2921287 None:intergenic 35.0%
!!! GCCTTCCAACTACTATTTTT+TGG + chr7.2:2919596-2919615 None:intergenic 35.0%
AAACTAGGACCAATCGTTGT+AGG + chr7.2:2921278-2921297 None:intergenic 40.0%
AACCTTCCATTCAACCAGTA+TGG - chr7.2:2920496-2920515 MS.gene050499:intron 40.0%
AAGAATGCAAAAGGAGGAGA+AGG - chr7.2:2921167-2921186 MS.gene050499:CDS 40.0%
AAGTGTGGTGGTTTCATTGT+GGG - chr7.2:2920387-2920406 MS.gene050499:intron 40.0%
AATATCCATCAAGTGGCGAA+TGG + chr7.2:2920836-2920855 None:intergenic 40.0%
ATATACGTAGCTCCAGGTAA+AGG + chr7.2:2921137-2921156 None:intergenic 40.0%
ATGTCCTGATCCAATCAGTT+TGG + chr7.2:2920311-2920330 None:intergenic 40.0%
CATGAATGTATGGGCAGAAA+TGG - chr7.2:2920458-2920477 MS.gene050499:intron 40.0%
CATTGTTAATGTTCACAGCG+CGG - chr7.2:2918945-2918964 MS.gene050499:CDS 40.0%
CCACATAAGAATGCAAAAGG+AGG - chr7.2:2921161-2921180 MS.gene050499:CDS 40.0%
CTATCGTTACGAACCATCAA+TGG - chr7.2:2919081-2919100 MS.gene050499:CDS 40.0%
GAACTCATATACGATGTTCC+AGG - chr7.2:2919313-2919332 MS.gene050499:CDS 40.0%
GCATTCTTTGGCAGATCTTA+TGG - chr7.2:2920977-2920996 MS.gene050499:CDS 40.0%
GTAAACTGGAACCATGCAAT+TGG - chr7.2:2920411-2920430 MS.gene050499:intron 40.0%
TAACAGGCAAGAAGACAAGT+TGG - chr7.2:2919841-2919860 MS.gene050499:CDS 40.0%
! AAACCCTTTAGGTTATGCAG+TGG - chr7.2:2920911-2920930 MS.gene050499:CDS 40.0%
! AGTAAATTTTGGATGGGGTG+AGG - chr7.2:2921076-2921095 MS.gene050499:CDS 40.0%
! CAAATGTACTGCATTGACGA+AGG + chr7.2:2920701-2920720 None:intergenic 40.0%
! CCTCCTTTTGCATTCTTATG+TGG + chr7.2:2921164-2921183 None:intergenic 40.0%
! TCGCCACTTGATGGATATTA+TGG - chr7.2:2920837-2920856 MS.gene050499:intron 40.0%
! TGGTAACTGTTTTGCTTTCC+CGG - chr7.2:2920857-2920876 MS.gene050499:intron 40.0%
!! AAGTTGATGGTGGATTGTAC+TGG - chr7.2:2919202-2919221 MS.gene050499:CDS 40.0%
!! TCTGTCAAAATCGATTCGAG+TGG + chr7.2:2919632-2919651 None:intergenic 40.0%
!! TGCCTACAATTTTGGAGACT+AGG - chr7.2:2919535-2919554 MS.gene050499:CDS 40.0%
AAGAATTAGGGAGGGAGCTA+GGG - chr7.2:2919177-2919196 MS.gene050499:CDS 45.0%
AAGCTTTGCGGAAACCCTTT+AGG - chr7.2:2920900-2920919 MS.gene050499:CDS 45.0%
AGTTCTTGGAAGCAAGGGAA+TGG + chr7.2:2919298-2919317 None:intergenic 45.0%
ATCCACTTGCGGGAAGAATT+AGG - chr7.2:2919164-2919183 MS.gene050499:CDS 45.0%
CAAGTGTGGTGGTTTCATTG+TGG - chr7.2:2920386-2920405 MS.gene050499:intron 45.0%
CGAATTGCAGCTATGTGAGA+AGG + chr7.2:2920660-2920679 None:intergenic 45.0%
CTGATTGGATCAGGACATGA+TGG - chr7.2:2920313-2920332 MS.gene050499:intron 45.0%
CTTCTTGCCTGTTAGTTGAG+AGG + chr7.2:2919835-2919854 None:intergenic 45.0%
GCATCGTTAATGCACGTTCA+AGG - chr7.2:2920799-2920818 MS.gene050499:intron 45.0%
GCTAGGCCAGCAAAACATTA+AGG + chr7.2:2919403-2919422 None:intergenic 45.0%
GGGATTATATACGTAGCTCC+AGG + chr7.2:2921143-2921162 None:intergenic 45.0%
GGGTCTTTCTCTACCATTGA+TGG + chr7.2:2919097-2919116 None:intergenic 45.0%
GGTAGAGAAAGACCCTGTTA+AGG - chr7.2:2919102-2919121 MS.gene050499:CDS 45.0%
GTTCTTGGAAGCAAGGGAAT+GGG + chr7.2:2919297-2919316 None:intergenic 45.0%
GTTTCATTGTGGGCGTAAAC+TGG - chr7.2:2920397-2920416 MS.gene050499:intron 45.0%
TCCACTTGCGGGAAGAATTA+GGG - chr7.2:2919165-2919184 MS.gene050499:CDS 45.0%
TTCTTGGAAGCAAGGGAATG+GGG + chr7.2:2919296-2919315 None:intergenic 45.0%
! AAATTTTGGATGGGGTGAGG+CGG - chr7.2:2921079-2921098 MS.gene050499:CDS 45.0%
! AGTTTAACTTCGCGAGGAGT+GGG + chr7.2:2919004-2919023 None:intergenic 45.0%
! ATGGTGGAGTGGTAAAAGGT+GGG - chr7.2:2921105-2921124 MS.gene050499:CDS 45.0%
! CTGCATTGACGAAGGTGAAA+TGG + chr7.2:2920693-2920712 None:intergenic 45.0%
! GTGTATGGTGGAGTGGTAAA+AGG - chr7.2:2921101-2921120 MS.gene050499:CDS 45.0%
! TAGTTTAACTTCGCGAGGAG+TGG + chr7.2:2919005-2919024 None:intergenic 45.0%
! TATGGTGGAGTGGTAAAAGG+TGG - chr7.2:2921104-2921123 MS.gene050499:CDS 45.0%
!! ATGGTGGATTGTACTGGTGA+AGG - chr7.2:2919208-2919227 MS.gene050499:CDS 45.0%
ACTTGCGGGAAGAATTAGGG+AGG - chr7.2:2919168-2919187 MS.gene050499:CDS 50.0%
ATCACACGTCTCAAGTGTGG+TGG - chr7.2:2920375-2920394 MS.gene050499:intron 50.0%
ATGGCGCAGAGAGATCCTAA+TGG - chr7.2:2920515-2920534 MS.gene050499:intron 50.0%
CAGATCACACGTCTCAAGTG+TGG - chr7.2:2920372-2920391 MS.gene050499:intron 50.0%
CATGCAATTGGCGATGCAAC+AGG - chr7.2:2920423-2920442 MS.gene050499:intron 50.0%
CGATGGTTGCAAGTAATGCG+CGG + chr7.2:2920552-2920571 None:intergenic 50.0%
CTGTTGCATCGCCAATTGCA+TGG + chr7.2:2920425-2920444 None:intergenic 50.0%
CTTGCGGGAAGAATTAGGGA+GGG - chr7.2:2919169-2919188 MS.gene050499:CDS 50.0%
GAAGAATTAGGGAGGGAGCT+AGG - chr7.2:2919176-2919195 MS.gene050499:CDS 50.0%
GCTAACCATTCGCCACTTGA+TGG - chr7.2:2920828-2920847 MS.gene050499:intron 50.0%
TCCCTAATTCTTCCCGCAAG+TGG + chr7.2:2919169-2919188 None:intergenic 50.0%
TCTTGGAAGCAAGGGAATGG+GGG + chr7.2:2919295-2919314 None:intergenic 50.0%
TGGTGGAGTGGTAAAAGGTG+GGG - chr7.2:2921106-2921125 MS.gene050499:CDS 50.0%
TGTTAATGTTCACAGCGCGG+AGG - chr7.2:2918948-2918967 MS.gene050499:CDS 50.0%
! CGCCATACTGGTTGAATGGA+AGG + chr7.2:2920501-2920520 None:intergenic 50.0%
! TCTGCGCCATACTGGTTGAA+TGG + chr7.2:2920505-2920524 None:intergenic 50.0%
!! AGCTAGGGACAAGTTGATGG+TGG - chr7.2:2919192-2919211 MS.gene050499:CDS 50.0%
AAAGCTGGTGGCACCAACTC+TGG + chr7.2:2918980-2918999 None:intergenic 55.0%
AAGCAAGGGAATGGGGGATG+AGG + chr7.2:2919289-2919308 None:intergenic 55.0%
AGGATCTCTCTGCGCCATAC+TGG + chr7.2:2920513-2920532 None:intergenic 55.0%
GGTTGCAAGTAATGCGCGGA+GGG + chr7.2:2920548-2920567 None:intergenic 55.0%
GTATGGGCAGAAATGGCTCG+AGG - chr7.2:2920465-2920484 MS.gene050499:intron 55.0%
GTTTCCGCAAAGCTTCCCTG+CGG + chr7.2:2920895-2920914 None:intergenic 55.0%
TGGTTGCAAGTAATGCGCGG+AGG + chr7.2:2920549-2920568 None:intergenic 55.0%
! GGGAGCTAGGGACAAGTTGA+TGG - chr7.2:2919189-2919208 MS.gene050499:CDS 55.0%
ACCACCGCAGGGAAGCTTTG+CGG - chr7.2:2920888-2920907 MS.gene050499:CDS 60.0%
CGAGGAGTGGGTAAAGCTGG+TGG + chr7.2:2918992-2919011 None:intergenic 60.0%
CTGGTGGCACCAACTCTGGT+TGG + chr7.2:2918976-2918995 None:intergenic 60.0%
GCGGAGGGTCTCTTGCCATT+AGG + chr7.2:2920533-2920552 None:intergenic 60.0%
GGAGTGGTAAAAGGTGGGGC+TGG - chr7.2:2921110-2921129 MS.gene050499:CDS 60.0%
TCGCGAGGAGTGGGTAAAGC+TGG + chr7.2:2918995-2919014 None:intergenic 60.0%
! TGAGGCGGTGTATGGTGGAG+TGG - chr7.2:2921094-2921113 MS.gene050499:CDS 60.0%
GGATGGGGTGAGGCGGTGTA+TGG - chr7.2:2921086-2921105 MS.gene050499:CDS 65.0%
GGTGGGGCTGGACCTTTACC+TGG - chr7.2:2921122-2921141 MS.gene050499:CDS 65.0%
TCCGCAAAGCTTCCCTGCGG+TGG + chr7.2:2920892-2920911 None:intergenic 65.0%
TGGGGTGAGGCGGTGTATGG+TGG - chr7.2:2921089-2921108 MS.gene050499:CDS 65.0%
!! GCGGAGGTGCCAACCAGAGT+TGG - chr7.2:2918964-2918983 MS.gene050499:CDS 65.0%
CCTGCGGTGGTGACAGCAGC+CGG + chr7.2:2920879-2920898 None:intergenic 70.0%
CGGCTGCTGTCACCACCGCA+GGG - chr7.2:2920877-2920896 MS.gene050499:CDS 70.0%
CTGCGGTGGTGACAGCAGCC+GGG + chr7.2:2920878-2920897 None:intergenic 70.0%
CCGGCTGCTGTCACCACCGC+AGG - chr7.2:2920876-2920895 MS.gene050499:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 2918935 2921316 2918935 ID=MS.gene050499
chr7.2 mRNA 2918935 2921316 2918935 ID=MS.gene050499.t1;Parent=MS.gene050499
chr7.2 exon 2920876 2921316 2920876 ID=MS.gene050499.t1.exon1;Parent=MS.gene050499.t1
chr7.2 CDS 2920876 2921316 2920876 ID=cds.MS.gene050499.t1;Parent=MS.gene050499.t1
chr7.2 exon 2918935 2919876 2918935 ID=MS.gene050499.t1.exon2;Parent=MS.gene050499.t1
chr7.2 CDS 2918935 2919876 2918935 ID=cds.MS.gene050499.t1;Parent=MS.gene050499.t1
Gene Sequence

>MS.gene050499

ATGACTTCGTCATTGTTAATGTTCACAGCGCGGAGGTGCCAACCAGAGTTGGTGCCACCAGCTTTACCCACTCCTCGCGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGTTTGCGTTTCAATATGCCTATTATATTTATCTATCGTTACGAACCATCAATGGTAGAGAAAGACCCTGTTAAGGTTCTTAAATGTGCACTCTCAAAAACACTTGTTTATTACTATCCACTTGCGGGAAGAATTAGGGAGGGAGCTAGGGACAAGTTGATGGTGGATTGTACTGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATGAATTTGGTGATGTACCTCATCCCCCATTCCCTTGCTTCCAAGAACTCATATACGATGTTCCAGGCACGAAACAAATTATTGATCATCCTATTCTGTTCATACAGGTTCAATCATGTTAATTCTCTCATCCTTAATGTTTTGCTGGCCTAGCCACACTTTTGACTTAATCACCATTTTTGTCCATAAAGTTGTGACTCAGACAATATTACATACCTTGCTTTTAAATTTTAATTTTTTGTTGATTTCAGAGATTATATTGTTATTGCCTACAATTTTGGAGACTAGGTTAATTTTCCAACCTATGTTTTTTTTTTCTTTTTTCCAAAAAATAGTAGTTGGAAGGCATGACAATTGAATCCACTCGAATCGATTTTGACAGAAAATTAATTATGGGTAGAGACGGATTCAAATTTTCTCCGTCAATGATTAAAGAAAATTACATACAAAAAATATTAATATACTATGTTTAATGCACATACAGTTAGTTATTTTAGGCTAAATTAAATATTTAGTTCCTAAACTAATTTCATAGATTTATTTTAGTTTCATAACTAATTTTGCCTCTCAACTAACAGGCAAGAAGACAAGTTGGCTAACGAAAACATAGTTGACTGACCAAAACAAAAGAAATATTTGTTATGAGATCAAAATGAAATTAGAATAATAATTAAAGGACTAAACATATGATAAGCCTTTATGTTTTCATATACATATTTAAATTTTAGTCTCTTTTTAATGAAAAAATCATTGATTTGAAATTCAAAGGATCCTTTAGTGAGACTCATTTGAGTTTCAACTAGTTGAGTATGAGTTGAGAAGAGTGTGTTGCTAATGCTCATTATTTAATGATTAAATGATTTAATCTATTATATGGAGCTAGAAAACCTTAATCTCATACCAAACAATATACTTGCCTTTCTTTCTATGTTCATAGAAGAAAACATATAAATTAAAAATTACAATTAAACAGCCACATGAACTTTCTTTTTTGATTAAGAGCCACATGAACTTTCTACATGTTAATACATCACATATACCAAACTGATTGGATCAGGACATGATGGATGTATCTCTATTATTTAGTATTACGTTTAAAATGACAGATCACACGTCTCAAGTGTGGTGGTTTCATTGTGGGCGTAAACTGGAACCATGCAATTGGCGATGCAACAGGTTTGAAACAATTCATGAATGTATGGGCAGAAATGGCTCGAGGTGCACATCAACCTTCCATTCAACCAGTATGGCGCAGAGAGATCCTAATGGCAAGAGACCCTCCGCGCATTACTTGCAACCATCGTGAATACCAACAAATACTTCCGTCAAATATCAACAAGGAAGAAGATAATGTTGCTACCATAGTCCATCAATCTTTCTTCTTTACACCTTCTCACATAGCTGCAATTCGTCACTTGATTCCATTTCACCTTCGTCAATGCAGTACATTTGATCTTATCACTGCATGTTTTTGGTGTTGTCGCACAAAAGCATTACAGCTAGAGCCAGATGAAGAAGTACAAATGATGTGCATCGTTAATGCACGTTCAAGGTTTAGGGCTAACCATTCGCCACTTGATGGATATTATGGTAACTGTTTTGCTTTCCCGGCTGCTGTCACCACCGCAGGGAAGCTTTGCGGAAACCCTTTAGGTTATGCAGTGGAAATGATAAGAAAAGCAAAAGCTGAAGTTACAGAAGAATACATGCATTCTTTGGCAGATCTTATGGTTATTAAGGAACGATGTTTATTTACAACAATAAGAGCATGTGTTGTATCAGACTTGACTCGTGCTAAGTACTCAGAAGTAAATTTTGGATGGGGTGAGGCGGTGTATGGTGGAGTGGTAAAAGGTGGGGCTGGACCTTTACCTGGAGCTACGTATATAATCCCACATAAGAATGCAAAAGGAGGAGAAGGTTTGATATTATTAATTTTCTTAACCTCTGAAGTTATGAAGAGGTTTGCTGAAGAGTTAGATAAGATGTTTGGTAACCAAAATCAACCTACAACGATTGGTCCTAGTTTTGTTATCTCTACCTTATAG

Protein sequence

>MS.gene050499.t1

MTSSLLMFTARRCQPELVPPALPTPREVKLLSDIDDQEGLRFNMPIIFIYRYEPSMVEKDPVKVLKCALSKTLVYYYPLAGRIREGARDKLMVDCTGEGVMFIEAEADVTLDEFGDVPHPPFPCFQELIYDVPGTKQIIDHPILFIQITRLKCGGFIVGVNWNHAIGDATGLKQFMNVWAEMARGAHQPSIQPVWRREILMARDPPRITCNHREYQQILPSNINKEEDNVATIVHQSFFFTPSHIAAIRHLIPFHLRQCSTFDLITACFWCCRTKALQLEPDEEVQMMCIVNARSRFRANHSPLDGYYGNCFAFPAAVTTAGKLCGNPLGYAVEMIRKAKAEVTEEYMHSLADLMVIKERCLFTTIRACVVSDLTRAKYSEVNFGWGEAVYGGVVKGGAGPLPGATYIIPHKNAKGGEGLILLIFLTSEVMKRFAEELDKMFGNQNQPTTIGPSFVISTL