Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51157.t1 | XP_013449368.1 | 99.2 | 597 | 4 | 1 | 1 | 597 | 1 | 596 | 0.00E+00 | 1193.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51157.t1 | Q9STY4 | 70.2 | 597 | 157 | 5 | 12 | 594 | 9 | 598 | 4.3e-237 | 822.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51157.t1 | A0A072U1X8 | 99.2 | 597 | 4 | 1 | 1 | 597 | 1 | 596 | 0.0e+00 | 1193.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051858 | MS.gene51157 | 0.802107 | 6.56E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene51157 | 0.808272 | 3.36E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene51157 | 0.810252 | 1.26E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene51157 | 0.813249 | 2.82E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene51157 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene51157 | 0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene51157 | 0.813474 | 2.51E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene51157 | 0.827611 | 1.42E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene51157 | 0.80855 | 2.93E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene51157 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene055722 | MS.gene51157 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene51157 | 0.845258 | 4.54E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene51157 | 0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene51157 | 0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene05837 | MS.gene51157 | 0.805187 | 1.51E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene51157 | 0.813239 | 2.83E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene51157 | 0.823708 | 1.20E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene51157 | 0.807196 | 5.69E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene51157 | 0.805385 | 1.37E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51157.t1 | MTR_7g080117 | 99.162 | 597 | 4 | 1 | 1 | 597 | 1 | 596 | 0.0 | 1228 |
| MS.gene51157.t1 | MTR_7g080117 | 98.824 | 510 | 5 | 1 | 1 | 510 | 1 | 509 | 0.0 | 1050 |
| MS.gene51157.t1 | MTR_4g119220 | 28.363 | 342 | 218 | 8 | 21 | 352 | 63 | 387 | 2.58e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51157.t1 | AT3G47390 | 74.150 | 588 | 146 | 4 | 12 | 594 | 9 | 595 | 0.0 | 905 |
| MS.gene51157.t1 | AT3G47390 | 70.519 | 597 | 155 | 6 | 12 | 594 | 9 | 598 | 0.0 | 852 |
| MS.gene51157.t1 | AT4G20960 | 27.922 | 308 | 197 | 8 | 32 | 333 | 74 | 362 | 3.90e-22 | 99.8 |
Find 155 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCCCCATGATCTCTTT+TGG | 0.115959 | 7.3:-27339471 | MS.gene51157:CDS |
| CCTATTCTAGCAGCTTCTTC+TGG | 0.242745 | 7.3:+27339965 | None:intergenic |
| CTTTAGACGCAAGCAGCTTC+TGG | 0.243341 | 7.3:+27341201 | None:intergenic |
| CCATCTCCTGTGGGTGATCT+TGG | 0.250546 | 7.3:-27340551 | MS.gene51157:CDS |
| ATTCAAATGCCTGATGAAAA+TGG | 0.287858 | 7.3:-27340181 | MS.gene51157:CDS |
| TGCTGTGTCTGCCCTACTTC+AGG | 0.295221 | 7.3:-27342701 | MS.gene51157:intron |
| TTTGTTGCTCCTAAAATTAT+TGG | 0.320816 | 7.3:-27340587 | MS.gene51157:CDS |
| TACCTCCCCTGCCGAAGTTC+AGG | 0.321275 | 7.3:-27342806 | MS.gene51157:CDS |
| TCCCATAGGTTTGCCTCCTC+TGG | 0.337323 | 7.3:+27341278 | None:intergenic |
| GGATTGCAAGTTGATCTTCT+TGG | 0.339246 | 7.3:-27342507 | MS.gene51157:CDS |
| TACTACTGCAAAGGATTGTT+TGG | 0.342245 | 7.3:-27340011 | MS.gene51157:CDS |
| GGGGTCAAAAGGGTTGTTAT+TGG | 0.344452 | 7.3:-27342588 | MS.gene51157:CDS |
| ATTAAATCCGCGGGATGTTA+TGG | 0.355275 | 7.3:-27341153 | MS.gene51157:CDS |
| CCATGTCTGGCTGTCAATCT+TGG | 0.358207 | 7.3:+27341350 | None:intergenic |
| TGCTTTGCATTTGCAGATGA+TGG | 0.358381 | 7.3:+27342993 | None:intergenic |
| TAAACTAGGGTGGGGTCAAA+AGG | 0.367576 | 7.3:-27342599 | MS.gene51157:intron |
| GGAATTGTCGGTGCCGTATC+TGG | 0.388005 | 7.3:+27340322 | None:intergenic |
| CATCTCCTGTGGGTGATCTT+GGG | 0.394148 | 7.3:-27340550 | MS.gene51157:CDS |
| ACCTGCAGATAAGGCCTGAT+TGG | 0.404509 | 7.3:-27339603 | MS.gene51157:intron |
| ATCTTCATGTTGTCCCAATC+AGG | 0.408250 | 7.3:+27339589 | None:intergenic |
| GCTGCGTCTGCTATTTCGTC+TGG | 0.408450 | 7.3:-27341074 | MS.gene51157:CDS |
| GCTGCTTTCAACTGCCGGTT+CGG | 0.409041 | 7.3:-27339506 | MS.gene51157:CDS |
| ACCCCTCTGTGTTACAACTA+TGG | 0.410725 | 7.3:+27341238 | None:intergenic |
| CCAGAAGAAGCTGCTAGAAT+AGG | 0.417213 | 7.3:-27339965 | MS.gene51157:CDS |
| GGCTCCACGGCAACGCTCGC+CGG | 0.419042 | 7.3:+27342771 | None:intergenic |
| GGTCCAGACATGCTTGTTAG+TGG | 0.427768 | 7.3:-27340361 | MS.gene51157:CDS |
| CATATGCCCACCTCCATGTC+TGG | 0.434550 | 7.3:+27341337 | None:intergenic |
| GCGATGACGCAGCCGAAGTT+GGG | 0.438649 | 7.3:+27342877 | None:intergenic |
| AGCATACTTGAGAACAGAAA+AGG | 0.439969 | 7.3:+27341720 | None:intergenic |
| AATCCACTAACAAGCATGTC+TGG | 0.442951 | 7.3:+27340358 | None:intergenic |
| ACAAAGGCAGCGTCCTGATC+TGG | 0.443695 | 7.3:-27339933 | MS.gene51157:intron |
| GGCGATGACGCAGCCGAAGT+TGG | 0.446690 | 7.3:+27342876 | None:intergenic |
| CTCCGCCCCAAAAGAGATCA+TGG | 0.450575 | 7.3:+27339464 | None:intergenic |
| TCCGGCGATGTCGCCGGTGA+AGG | 0.456323 | 7.3:-27342847 | MS.gene51157:CDS |
| AGTCACCAGGTTCCATGTTC+AGG | 0.469375 | 7.3:+27342740 | None:intergenic |
| CTGCTAGCACTGGCCATGCA+TGG | 0.471816 | 7.3:-27341553 | MS.gene51157:CDS |
| TCCTCTGGTGATGGAATTGT+CGG | 0.475073 | 7.3:+27340310 | None:intergenic |
| CAGAAGCTGCTTGCGTCTAA+AGG | 0.475517 | 7.3:-27341200 | MS.gene51157:CDS |
| ACAACCACGCGCTCGACGCC+GGG | 0.481082 | 7.3:-27342957 | MS.gene51157:CDS |
| AATGAGAAAGTGTTAGCGAT+TGG | 0.487967 | 7.3:+27343021 | None:intergenic |
| CACTAGTAGTAAGATTATAG+AGG | 0.488783 | 7.3:-27342475 | MS.gene51157:intron |
| TCTTCAACCGTTACCAGATA+CGG | 0.490264 | 7.3:-27340335 | MS.gene51157:CDS |
| GTAACGGCCTGAACTTCGGC+AGG | 0.490513 | 7.3:+27342799 | None:intergenic |
| AGCCTCAACTAGAACCGAAC+CGG | 0.490853 | 7.3:+27339492 | None:intergenic |
| CGCGTAGAGGTAACCTTCAC+CGG | 0.491469 | 7.3:+27342834 | None:intergenic |
| TCCTGTGGGTGATCTTGGGA+TGG | 0.493024 | 7.3:-27340546 | MS.gene51157:CDS |
| TTCCTCTAAAATGTTGCAAA+GGG | 0.493936 | 7.3:+27342556 | None:intergenic |
| GTTGCTCCTAAAATTATTGG+TGG | 0.494160 | 7.3:-27340584 | MS.gene51157:CDS |
| ACCGGCGACATCGCCGGAGG+GGG | 0.494201 | 7.3:+27342852 | None:intergenic |
| CACAACCACGCGCTCGACGC+CGG | 0.496670 | 7.3:-27342958 | MS.gene51157:CDS |
| TCTATGCTGCTTTCAACTGC+CGG | 0.499219 | 7.3:-27339511 | MS.gene51157:CDS |
| AATCGATGTTTGCTATCAGC+AGG | 0.499777 | 7.3:-27340498 | MS.gene51157:intron |
| CCTGCAGATAAGGCCTGATT+GGG | 0.500182 | 7.3:-27339602 | MS.gene51157:intron |
| TTCCAGAGGAGGCAAACCTA+TGG | 0.503763 | 7.3:-27341280 | MS.gene51157:CDS |
| TGCCGGTTCGGTTCTAGTTG+AGG | 0.505390 | 7.3:-27339494 | MS.gene51157:CDS |
| ACTTCTCCTCATCCCAACTT+CGG | 0.506879 | 7.3:-27342889 | MS.gene51157:CDS |
| AATCATTGTGGGAGGAAATA+CGG | 0.507294 | 7.3:-27341471 | MS.gene51157:CDS |
| CAACAAGGCAAACCTGAAGT+AGG | 0.507837 | 7.3:+27342689 | None:intergenic |
| AATATGATGCTGGATTCATA+TGG | 0.519826 | 7.3:+27340259 | None:intergenic |
| CTGGGAATGTGGAGGAACAT+TGG | 0.521107 | 7.3:-27341096 | MS.gene51157:CDS |
| TCAAAGGAGCGTTAACAAGA+AGG | 0.530304 | 7.3:+27341767 | None:intergenic |
| ATAAAAGTTTCCTCTGGTGA+TGG | 0.531804 | 7.3:+27340301 | None:intergenic |
| ACGCTCGCCGGCGGAAGTAA+CGG | 0.532940 | 7.3:+27342783 | None:intergenic |
| ACCTTCACCGGCGACATCGC+CGG | 0.537703 | 7.3:+27342846 | None:intergenic |
| GGGATGAGGAGAAGTGAAAC+CGG | 0.538335 | 7.3:+27342897 | None:intergenic |
| TCCGCCGGCGAGCGTTGCCG+TGG | 0.540138 | 7.3:-27342775 | MS.gene51157:CDS |
| GCATACTTGAGAACAGAAAA+GGG | 0.542072 | 7.3:+27341721 | None:intergenic |
| GGAAGTAACGGCCTGAACTT+CGG | 0.544526 | 7.3:+27342795 | None:intergenic |
| GTGTTGGGTCATACCAGATC+AGG | 0.544618 | 7.3:+27339920 | None:intergenic |
| TCCACGGCAACGCTCGCCGG+CGG | 0.544849 | 7.3:+27342774 | None:intergenic |
| TTTCCTCTAAAATGTTGCAA+AGG | 0.545620 | 7.3:+27342555 | None:intergenic |
| GGAGAAGGCTTGAATTATCT+CGG | 0.546128 | 7.3:-27339433 | MS.gene51157:CDS |
| GGCGCACAAGTTCGTTGGAG+TGG | 0.548370 | 7.3:-27340038 | MS.gene51157:CDS |
| GCCTAGGCGCACAAGTTCGT+TGG | 0.548390 | 7.3:-27340043 | MS.gene51157:intron |
| GTTCAGGCCGTTACTTCCGC+CGG | 0.550199 | 7.3:-27342790 | MS.gene51157:CDS |
| AAACTAGGGTGGGGTCAAAA+GGG | 0.550454 | 7.3:-27342598 | MS.gene51157:intron |
| AGAAGCGATGCAATCATTGT+GGG | 0.552806 | 7.3:-27341482 | MS.gene51157:CDS |
| GTTTGACATATTAAATCCGC+GGG | 0.554131 | 7.3:-27341162 | MS.gene51157:CDS |
| TACCATAGTTGTAACACAGA+GGG | 0.554429 | 7.3:-27341240 | MS.gene51157:CDS |
| TGCAGCTTATCCACCATGCA+TGG | 0.556200 | 7.3:+27341540 | None:intergenic |
| GATTCATATGGAGAGACAGT+AGG | 0.557834 | 7.3:+27340271 | None:intergenic |
| CACCGGCGACATCGCCGGAG+GGG | 0.557977 | 7.3:+27342851 | None:intergenic |
| TCCAGAGGAGGCAAACCTAT+GGG | 0.558460 | 7.3:-27341279 | MS.gene51157:CDS |
| CCAAGATCACCCACAGGAGA+TGG | 0.558536 | 7.3:+27340551 | None:intergenic |
| AACGGCCTGAACTTCGGCAG+GGG | 0.559238 | 7.3:+27342801 | None:intergenic |
| TCAGGCATTTGAATGGGATG+AGG | 0.559838 | 7.3:+27340190 | None:intergenic |
| GCAAGTTGATCTTCTTGGAG+AGG | 0.566968 | 7.3:-27342502 | MS.gene51157:CDS |
| CCAAGATTGACAGCCAGACA+TGG | 0.570075 | 7.3:-27341350 | MS.gene51157:CDS |
| ATTGAGATCAGAGTTTCTTG+AGG | 0.571669 | 7.3:-27339395 | MS.gene51157:CDS |
| ACGCAGCCGAAGTTGGGATG+AGG | 0.573519 | 7.3:+27342883 | None:intergenic |
| ATTCATATGGAGAGACAGTA+GGG | 0.574668 | 7.3:+27340272 | None:intergenic |
| GGCCTGAACTTCGGCAGGGG+AGG | 0.575137 | 7.3:+27342804 | None:intergenic |
| AACAAGGCAAACCTGAAGTA+GGG | 0.576393 | 7.3:+27342690 | None:intergenic |
| TCAGCAATAAAAGTTTCCTC+TGG | 0.580534 | 7.3:+27340295 | None:intergenic |
| TCCGCCCCAAAAGAGATCAT+GGG | 0.581278 | 7.3:+27339465 | None:intergenic |
| AAATACTATACTGCTAAACT+AGG | 0.581783 | 7.3:+27339346 | None:intergenic |
| CTCATCGCTGACAAATCCGC+CGG | 0.581973 | 7.3:-27342916 | MS.gene51157:CDS |
| GTCCCTCGATCTTCCAGAGG+AGG | 0.585588 | 7.3:-27341291 | MS.gene51157:CDS |
| TGCCTCCTCTGGAAGATCGA+GGG | 0.585777 | 7.3:+27341289 | None:intergenic |
| GTCGGTGCCGTATCTGGTAA+CGG | 0.587126 | 7.3:+27340328 | None:intergenic |
| TGGGAGGAAATACGGTTCGA+AGG | 0.588232 | 7.3:-27341463 | MS.gene51157:CDS |
| TTGACAGCCAGACATGGAGG+TGG | 0.588804 | 7.3:-27341344 | MS.gene51157:CDS |
| GAAGGTTACCTCTACGCGCA+AGG | 0.589031 | 7.3:-27342829 | MS.gene51157:CDS |
| TTGTAACACAGAGGGGTGCA+AGG | 0.590044 | 7.3:-27341232 | MS.gene51157:CDS |
| GTGCGTGCACTTAGAAGTCA+AGG | 0.591377 | 7.3:-27342528 | MS.gene51157:CDS |
| TAGAAGCGATGCAATCATTG+TGG | 0.591803 | 7.3:-27341483 | MS.gene51157:CDS |
| TTGTCACCGTCACAGTCACC+AGG | 0.594772 | 7.3:+27342727 | None:intergenic |
| AGCCACTGCTTACCTGAACA+TGG | 0.597294 | 7.3:-27342752 | MS.gene51157:CDS |
| GGCGGAGGTCGAGAAGGAGA+AGG | 0.597455 | 7.3:-27339448 | MS.gene51157:CDS |
| GCTTACCTGAACATGGAACC+TGG | 0.598291 | 7.3:-27342745 | MS.gene51157:CDS |
| TCACCGGCGACATCGCCGGA+GGG | 0.599252 | 7.3:+27342850 | None:intergenic |
| TATACCCGGCGTCGAGCGCG+TGG | 0.604200 | 7.3:+27342953 | None:intergenic |
| GCAGCATAGAACTCAAATGC+GGG | 0.604823 | 7.3:+27339524 | None:intergenic |
| GAAGAAGCTCTACAAATCAA+AGG | 0.605213 | 7.3:+27341751 | None:intergenic |
| AAAATGGCGAAAACGTGACT+TGG | 0.606051 | 7.3:-27340165 | MS.gene51157:CDS |
| TCAGGTAAGCAGTGGCTCCA+CGG | 0.608613 | 7.3:+27342758 | None:intergenic |
| CAGCGATGAGAGCGGCGCGT+CGG | 0.611142 | 7.3:+27342929 | None:intergenic |
| AAACCTCAGACATGTCCCAT+AGG | 0.614924 | 7.3:+27341264 | None:intergenic |
| GGGAGGAAATACGGTTCGAA+GGG | 0.619650 | 7.3:-27341462 | MS.gene51157:CDS |
| TTCACCGGCGACATCGCCGG+AGG | 0.620959 | 7.3:+27342849 | None:intergenic |
| TTCCATGTTCAGGTAAGCAG+TGG | 0.622564 | 7.3:+27342750 | None:intergenic |
| TATAAAACATGGGATCCTCA+TGG | 0.624108 | 7.3:-27340232 | MS.gene51157:CDS |
| AGTGGATGATACTACTGCAA+AGG | 0.626634 | 7.3:-27340020 | MS.gene51157:CDS |
| AAACGTGACTTGGTTGAGTG+TGG | 0.626984 | 7.3:-27340155 | MS.gene51157:CDS |
| AAGAAGCTGCTAGAATAGGA+AGG | 0.627823 | 7.3:-27339961 | MS.gene51157:CDS |
| GAAGATCGATGTCATGTACT+CGG | 0.628310 | 7.3:-27339572 | MS.gene51157:CDS |
| AAACCTATGGGACATGTCTG+AGG | 0.629695 | 7.3:-27341267 | MS.gene51157:CDS |
| TTGCCTCCTCTGGAAGATCG+AGG | 0.633064 | 7.3:+27341288 | None:intergenic |
| GAGTGTGGAGCATTACTACC+AGG | 0.633117 | 7.3:-27340140 | MS.gene51157:intron |
| GAATAGGAAGGTCAATACAA+AGG | 0.635333 | 7.3:-27339949 | MS.gene51157:CDS |
| TGACAGCCAGACATGGAGGT+GGG | 0.637384 | 7.3:-27341343 | MS.gene51157:CDS |
| TGAGACATTACAATGCGTAT+CGG | 0.639633 | 7.3:+27341314 | None:intergenic |
| CTAGCACTGGCCATGCATGG+TGG | 0.640844 | 7.3:-27341550 | MS.gene51157:CDS |
| AGTTTGACATATTAAATCCG+CGG | 0.643413 | 7.3:-27341163 | MS.gene51157:CDS |
| TCAGTCCCTCGATCTTCCAG+AGG | 0.644283 | 7.3:-27341294 | MS.gene51157:CDS |
| TTCGTCTGGAGTAATTCACA+AGG | 0.644402 | 7.3:-27341060 | MS.gene51157:intron |
| AAAGAATGCACCATCTCCTG+TGG | 0.647393 | 7.3:-27340561 | MS.gene51157:CDS |
| CCGCCCCAAAAGAGATCATG+GGG | 0.652932 | 7.3:+27339466 | None:intergenic |
| AAATACTCCATAACATCCCG+CGG | 0.656854 | 7.3:+27341146 | None:intergenic |
| GGATTTGTCAGCGATGAGAG+CGG | 0.660555 | 7.3:+27342921 | None:intergenic |
| AGCGATGCAATCATTGTGGG+AGG | 0.663446 | 7.3:-27341479 | MS.gene51157:CDS |
| GGGAGGTACCTTGCGCGTAG+AGG | 0.664030 | 7.3:+27342821 | None:intergenic |
| ACCATCCCAAGATCACCCAC+AGG | 0.664172 | 7.3:+27340545 | None:intergenic |
| AGCGGCGCGTCGGATATACC+CGG | 0.666989 | 7.3:+27342939 | None:intergenic |
| TAACGGCCTGAACTTCGGCA+GGG | 0.670902 | 7.3:+27342800 | None:intergenic |
| AAGTATGCTATGACTCTCGA+TGG | 0.677384 | 7.3:-27341706 | MS.gene51157:intron |
| ACCGACAATTCCATCACCAG+AGG | 0.685659 | 7.3:-27340311 | MS.gene51157:CDS |
| AAATTTGACAATGCACCATG+AGG | 0.688050 | 7.3:+27340217 | None:intergenic |
| ATGAGGAGAAGTGAAACCGG+CGG | 0.688211 | 7.3:+27342900 | None:intergenic |
| AGCAGCATAGAACTCAAATG+CGG | 0.691668 | 7.3:+27339523 | None:intergenic |
| ATGGAACCTGGTGACTGTGA+CGG | 0.698388 | 7.3:-27342733 | MS.gene51157:CDS |
| AAGAATGCACCATCTCCTGT+GGG | 0.705424 | 7.3:-27340560 | MS.gene51157:CDS |
| AGATTGACAGCCAGACATGG+AGG | 0.708948 | 7.3:-27341347 | MS.gene51157:CDS |
| ACCATAGTTGTAACACAGAG+GGG | 0.730677 | 7.3:-27341239 | MS.gene51157:CDS |
| CTACCATAGTTGTAACACAG+AGG | 0.759254 | 7.3:-27341241 | MS.gene51157:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGACATATATTTTTAAT+TGG | + | chr7.3:27341966-27341985 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAGAAATGTTAT+TGG | - | chr7.3:27341420-27341439 | MS.gene51157:intron | 10.0% |
| !!! | ATAGAAAATAATGATAATGA+TGG | + | chr7.3:27340961-27340980 | None:intergenic | 15.0% |
| !!! | ATTTTACCTTAAAATATGTT+GGG | - | chr7.3:27341742-27341761 | MS.gene51157:CDS | 15.0% |
| !!! | CATATTTTTCTATAAAACAT+GGG | - | chr7.3:27342145-27342164 | MS.gene51157:intron | 15.0% |
| !!! | TCATATTTTTCTATAAAACA+TGG | - | chr7.3:27342144-27342163 | MS.gene51157:intron | 15.0% |
| !! | AAATCAACTTTAAACAATCT+CGG | + | chr7.3:27341569-27341588 | None:intergenic | 20.0% |
| !! | ATAATATGAAGTTCAATACA+AGG | + | chr7.3:27340132-27340151 | None:intergenic | 20.0% |
| !! | TTGTATTGAACTTCATATTA+TGG | - | chr7.3:27340131-27340150 | MS.gene51157:intron | 20.0% |
| !! | TTTATAGAAAAATATGATGC+TGG | + | chr7.3:27342141-27342160 | None:intergenic | 20.0% |
| !!! | AAACTTTTTGTTGTTGAAAA+GGG | - | chr7.3:27340437-27340456 | MS.gene51157:intron | 20.0% |
| !!! | ATAAATTTAATTTGATGCCT+AGG | - | chr7.3:27342328-27342347 | MS.gene51157:intron | 20.0% |
| !!! | ATTGTTTTCATATAAGTAAG+TGG | + | chr7.3:27342615-27342634 | None:intergenic | 20.0% |
| !!! | GATTTTACCTTAAAATATGT+TGG | - | chr7.3:27341741-27341760 | MS.gene51157:CDS | 20.0% |
| !!! | TCTTTTGTTTTAATTCAAGA+AGG | - | chr7.3:27339977-27339996 | MS.gene51157:CDS | 20.0% |
| !!! | TTATTTGATAACACTGATTT+TGG | - | chr7.3:27340185-27340204 | MS.gene51157:CDS | 20.0% |
| !!! | TTTTGATGATTGAAACTTAT+TGG | - | chr7.3:27342761-27342780 | MS.gene51157:CDS | 20.0% |
| ! | AAAACAATGCCAATAACAAA+TGG | + | chr7.3:27341400-27341419 | None:intergenic | 25.0% |
| ! | AAACAGTATCAGTATTTCAA+AGG | + | chr7.3:27341939-27341958 | None:intergenic | 25.0% |
| ! | AAATGTTTGAAAAACGTGTT+GGG | + | chr7.3:27342485-27342504 | None:intergenic | 25.0% |
| ! | AACAGTATCAGTATTTCAAA+GGG | + | chr7.3:27341938-27341957 | None:intergenic | 25.0% |
| ! | ATGTGTGAATAAAAAGCTAA+AGG | + | chr7.3:27340553-27340572 | None:intergenic | 25.0% |
| ! | CTATTAATGTGTCTTACTTT+CGG | - | chr7.3:27339951-27339970 | MS.gene51157:CDS | 25.0% |
| ! | TATTAATGTGTCTTACTTTC+GGG | - | chr7.3:27339952-27339971 | MS.gene51157:CDS | 25.0% |
| ! | TTCTAACTAATTTACTGCTA+CGG | - | chr7.3:27341467-27341486 | MS.gene51157:CDS | 25.0% |
| ! | TTTGTTGCTCCTAAAATTAT+TGG | - | chr7.3:27341800-27341819 | MS.gene51157:intron | 25.0% |
| !! | AGTTATCCCAACATATTTTA+AGG | + | chr7.3:27341751-27341770 | None:intergenic | 25.0% |
| !! | GAATAAAAAGCTAAAGGTTT+TGG | + | chr7.3:27340547-27340566 | None:intergenic | 25.0% |
| !! | GGATCTGAATGAATTTTAAA+AGG | + | chr7.3:27341019-27341038 | None:intergenic | 25.0% |
| !! | TAGCTTTTTATTCACACATA+TGG | - | chr7.3:27340554-27340573 | MS.gene51157:CDS | 25.0% |
| !! | TTCTTTCCACCAATAATTTT+AGG | + | chr7.3:27341812-27341831 | None:intergenic | 25.0% |
| !!! | AATGAAGTTCCATTTGTTAT+TGG | - | chr7.3:27341388-27341407 | MS.gene51157:intron | 25.0% |
| !!! | ACAAAAAGTTTGATTTTGCT+TGG | + | chr7.3:27340428-27340447 | None:intergenic | 25.0% |
| !!! | ATGAATTTTAAAAGGAAGGA+AGG | + | chr7.3:27341011-27341030 | None:intergenic | 25.0% |
| !!! | CAAACTTTTTGTTGTTGAAA+AGG | - | chr7.3:27340436-27340455 | MS.gene51157:intron | 25.0% |
| !!! | CTGAATGAATTTTAAAAGGA+AGG | + | chr7.3:27341015-27341034 | None:intergenic | 25.0% |
| !!! | TTATCTTTTTCATTTTCCGT+AGG | - | chr7.3:27341356-27341375 | MS.gene51157:intron | 25.0% |
| AAACATTTCTCAAACTCTTG+GGG | - | chr7.3:27342497-27342516 | MS.gene51157:CDS | 30.0% | |
| AATATGATGCTGGATTCATA+TGG | + | chr7.3:27342131-27342150 | None:intergenic | 30.0% | |
| ACAACACAATAATACTGCAA+AGG | + | chr7.3:27342306-27342325 | None:intergenic | 30.0% | |
| AGTTTGACATATTAAATCCG+CGG | - | chr7.3:27341224-27341243 | MS.gene51157:CDS | 30.0% | |
| ATTCAAATGCCTGATGAAAA+TGG | - | chr7.3:27342206-27342225 | MS.gene51157:intron | 30.0% | |
| CAAACATTTCTCAAACTCTT+GGG | - | chr7.3:27342496-27342515 | MS.gene51157:CDS | 30.0% | |
| CACTAGTAGTAAGATTATAG+AGG | - | chr7.3:27339912-27339931 | MS.gene51157:intron | 30.0% | |
| CTTATTTGAGCTTATCTGTT+CGG | - | chr7.3:27342534-27342553 | MS.gene51157:CDS | 30.0% | |
| CTTCATTTCAATTTCTCCTA+CGG | + | chr7.3:27341375-27341394 | None:intergenic | 30.0% | |
| GAAATGTTTGAAAAACGTGT+TGG | + | chr7.3:27342486-27342505 | None:intergenic | 30.0% | |
| GCACACAAAAAAAAATTACC+TGG | + | chr7.3:27342268-27342287 | None:intergenic | 30.0% | |
| TAGATTAAGGGCTATTACAT+AGG | - | chr7.3:27341681-27341700 | MS.gene51157:intron | 30.0% | |
| TATCAGTTCTTTATGTACTG+TGG | - | chr7.3:27340512-27340531 | MS.gene51157:CDS | 30.0% | |
| TCAAACATTTCTCAAACTCT+TGG | - | chr7.3:27342495-27342514 | MS.gene51157:CDS | 30.0% | |
| TTATTTAAGCATACCTCACA+GGG | - | chr7.3:27340386-27340405 | MS.gene51157:intron | 30.0% | |
| TTATTTGAGCTTATCTGTTC+GGG | - | chr7.3:27342535-27342554 | MS.gene51157:CDS | 30.0% | |
| ! | AATACTTCAATGATAACGCT+TGG | - | chr7.3:27342675-27342694 | MS.gene51157:intron | 30.0% |
| ! | ATTGTTAAGACACTTTTCTG+CGG | - | chr7.3:27341444-27341463 | MS.gene51157:intron | 30.0% |
| ! | ATTTTCATCAGGCATTTGAA+TGG | + | chr7.3:27342207-27342226 | None:intergenic | 30.0% |
| ! | GCTTTTGCTACTATTATTGA+AGG | - | chr7.3:27340462-27340481 | MS.gene51157:intron | 30.0% |
| ! | GTGGTTTTCATATACTATCT+AGG | + | chr7.3:27342596-27342615 | None:intergenic | 30.0% |
| ! | TTTTCATCAGGCATTTGAAT+GGG | + | chr7.3:27342206-27342225 | None:intergenic | 30.0% |
| !! | ATGGAGTATTTTTATGATCG+AGG | - | chr7.3:27341253-27341272 | MS.gene51157:CDS | 30.0% |
| !! | ATGTGTTCTGTTTTATTGAC+AGG | - | chr7.3:27340581-27340600 | MS.gene51157:CDS | 30.0% |
| !! | TGGAGTATTTTTATGATCGA+GGG | - | chr7.3:27341254-27341273 | MS.gene51157:CDS | 30.0% |
| !! | TTCCTCTAAAATGTTGCAAA+GGG | + | chr7.3:27339834-27339853 | None:intergenic | 30.0% |
| !! | TTTCCTCTAAAATGTTGCAA+AGG | + | chr7.3:27339835-27339854 | None:intergenic | 30.0% |
| !!! | TTGATAACACTGATTTTGGT+TGG | - | chr7.3:27340189-27340208 | MS.gene51157:CDS | 30.0% |
| AAATTTGACAATGCACCATG+AGG | + | chr7.3:27342173-27342192 | None:intergenic | 35.0% | |
| AACCTCCCTTCAATTTCAAA+GGG | + | chr7.3:27340291-27340310 | None:intergenic | 35.0% | |
| AATCATTGTGGGAGGAAATA+CGG | - | chr7.3:27340916-27340935 | MS.gene51157:intron | 35.0% | |
| AGAACCGATCTAACTTATTG+AGG | + | chr7.3:27342724-27342743 | None:intergenic | 35.0% | |
| AGAGCCTCAATAAGTTAGAT+CGG | - | chr7.3:27342717-27342736 | MS.gene51157:CDS | 35.0% | |
| AGCATACTTGAGAACAGAAA+AGG | + | chr7.3:27340670-27340689 | None:intergenic | 35.0% | |
| ATAAAAGTTTCCTCTGGTGA+TGG | + | chr7.3:27342089-27342108 | None:intergenic | 35.0% | |
| ATCATCAAAACACTCAGCAA+AGG | + | chr7.3:27342751-27342770 | None:intergenic | 35.0% | |
| ATTCATATGGAGAGACAGTA+GGG | + | chr7.3:27342118-27342137 | None:intergenic | 35.0% | |
| ATTGAGATCAGAGTTTCTTG+AGG | - | chr7.3:27342992-27343011 | MS.gene51157:CDS | 35.0% | |
| CAGTGTGTGAAACTAAACTA+GGG | - | chr7.3:27339775-27339794 | MS.gene51157:intron | 35.0% | |
| CTATTACATAGGCAACAACA+GGG | - | chr7.3:27341692-27341711 | MS.gene51157:intron | 35.0% | |
| CTCGAAATTGCATAAACTGT+TGG | - | chr7.3:27340764-27340783 | MS.gene51157:intron | 35.0% | |
| CTGTGATATTTATGTGTGTC+AGG | - | chr7.3:27341769-27341788 | MS.gene51157:CDS | 35.0% | |
| CTTTATGTACTGTGGTTAGT+GGG | - | chr7.3:27340520-27340539 | MS.gene51157:CDS | 35.0% | |
| GAAGAAGCTCTACAAATCAA+AGG | + | chr7.3:27340639-27340658 | None:intergenic | 35.0% | |
| GAATAGGAAGGTCAATACAA+AGG | - | chr7.3:27342438-27342457 | MS.gene51157:intron | 35.0% | |
| GCATACTTGAGAACAGAAAA+GGG | + | chr7.3:27340669-27340688 | None:intergenic | 35.0% | |
| GTACCACACAGTAATAATCT+TGG | + | chr7.3:27341633-27341652 | None:intergenic | 35.0% | |
| GTTATTTAAGCATACCTCAC+AGG | - | chr7.3:27340385-27340404 | MS.gene51157:intron | 35.0% | |
| GTTGCTCCTAAAATTATTGG+TGG | - | chr7.3:27341803-27341822 | MS.gene51157:intron | 35.0% | |
| GTTTGACATATTAAATCCGC+GGG | - | chr7.3:27341225-27341244 | MS.gene51157:CDS | 35.0% | |
| TACAAGGTGTAGTCAAATAG+TGG | + | chr7.3:27340116-27340135 | None:intergenic | 35.0% | |
| TACCATAGTTGTAACACAGA+GGG | - | chr7.3:27341147-27341166 | MS.gene51157:CDS | 35.0% | |
| TACTACTGCAAAGGATTGTT+TGG | - | chr7.3:27342376-27342395 | MS.gene51157:intron | 35.0% | |
| TATAAAACATGGGATCCTCA+TGG | - | chr7.3:27342155-27342174 | MS.gene51157:intron | 35.0% | |
| TCAAATAGTGGCTATAGCAA+TGG | + | chr7.3:27340104-27340123 | None:intergenic | 35.0% | |
| TCAGCAATAAAAGTTTCCTC+TGG | + | chr7.3:27342095-27342114 | None:intergenic | 35.0% | |
| TCATCAAAACACTCAGCAAA+GGG | + | chr7.3:27342750-27342769 | None:intergenic | 35.0% | |
| TCTTTATGTACTGTGGTTAG+TGG | - | chr7.3:27340519-27340538 | MS.gene51157:CDS | 35.0% | |
| TGAATCAATCACTGTAATGC+AGG | - | chr7.3:27342001-27342020 | MS.gene51157:intron | 35.0% | |
| TGAGACATTACAATGCGTAT+CGG | + | chr7.3:27341076-27341095 | None:intergenic | 35.0% | |
| TTCTTGTCTCATTACCTTCT+TGG | - | chr7.3:27340794-27340813 | MS.gene51157:intron | 35.0% | |
| ! | ACATTTTACCCTCATTTGTC+GGG | + | chr7.3:27340333-27340352 | None:intergenic | 35.0% |
| ! | CACATTTTACCCTCATTTGT+CGG | + | chr7.3:27340334-27340353 | None:intergenic | 35.0% |
| ! | CTAGTTTAGTTTCACACACT+GGG | + | chr7.3:27339776-27339795 | None:intergenic | 35.0% |
| ! | TTTTTCCTGTTACACCAAGA+AGG | + | chr7.3:27340811-27340830 | None:intergenic | 35.0% |
| !! | AATGAGAAAGTGTTAGCGAT+TGG | + | chr7.3:27339369-27339388 | None:intergenic | 35.0% |
| !! | AGGGTATCTTTCAGTTTTCT+GGG | - | chr7.3:27341273-27341292 | MS.gene51157:CDS | 35.0% |
| !! | ATTTACTGCTACGGATTAGA+TGG | - | chr7.3:27341476-27341495 | MS.gene51157:CDS | 35.0% |
| !! | CAACTCCCTTTGAAATTGAA+GGG | - | chr7.3:27340283-27340302 | MS.gene51157:CDS | 35.0% |
| !! | GGTTGATTCGTTTCTAACTA+TGG | - | chr7.3:27340210-27340229 | MS.gene51157:CDS | 35.0% |
| !! | TCAACTCCCTTTGAAATTGA+AGG | - | chr7.3:27340282-27340301 | MS.gene51157:CDS | 35.0% |
| AAAATGGCGAAAACGTGACT+TGG | - | chr7.3:27342222-27342241 | MS.gene51157:intron | 40.0% | |
| AAATACTCCATAACATCCCG+CGG | + | chr7.3:27341244-27341263 | None:intergenic | 40.0% | |
| AACAAGGCAAACCTGAAGTA+GGG | + | chr7.3:27339700-27339719 | None:intergenic | 40.0% | |
| AAGAAGCTGCTAGAATAGGA+AGG | - | chr7.3:27342426-27342445 | MS.gene51157:intron | 40.0% | |
| AAGTATGCTATGACTCTCGA+TGG | - | chr7.3:27340681-27340700 | MS.gene51157:intron | 40.0% | |
| AATCCACTAACAAGCATGTC+TGG | + | chr7.3:27342032-27342051 | None:intergenic | 40.0% | |
| ACCATAGTTGTAACACAGAG+GGG | - | chr7.3:27341148-27341167 | MS.gene51157:CDS | 40.0% | |
| ACTGAAAACTCGTGCAAGAA+AGG | + | chr7.3:27340737-27340756 | None:intergenic | 40.0% | |
| ACTTATTGGACCTGCAGATA+AGG | - | chr7.3:27342775-27342794 | MS.gene51157:CDS | 40.0% | |
| AGAAGCGATGCAATCATTGT+GGG | - | chr7.3:27340905-27340924 | MS.gene51157:intron | 40.0% | |
| AGCAGCATAGAACTCAAATG+CGG | + | chr7.3:27342867-27342886 | None:intergenic | 40.0% | |
| AGTGGATGATACTACTGCAA+AGG | - | chr7.3:27342367-27342386 | MS.gene51157:intron | 40.0% | |
| ATCGTCTCACCTCAAATCAA+CGG | - | chr7.3:27341607-27341626 | MS.gene51157:intron | 40.0% | |
| ATCTTCATGTTGTCCCAATC+AGG | + | chr7.3:27342801-27342820 | None:intergenic | 40.0% | |
| ATTAAATCCGCGGGATGTTA+TGG | - | chr7.3:27341234-27341253 | MS.gene51157:CDS | 40.0% | |
| CAACCTCCCTTCAATTTCAA+AGG | + | chr7.3:27340292-27340311 | None:intergenic | 40.0% | |
| CCAGTGTGTGAAACTAAACT+AGG | - | chr7.3:27339774-27339793 | MS.gene51157:intron | 40.0% | |
| CTACCATAGTTGTAACACAG+AGG | - | chr7.3:27341146-27341165 | MS.gene51157:CDS | 40.0% | |
| CTCGGTCAGTGATTTAGATT+GGG | + | chr7.3:27341551-27341570 | None:intergenic | 40.0% | |
| GAAGATCGATGTCATGTACT+CGG | - | chr7.3:27342815-27342834 | MS.gene51157:CDS | 40.0% | |
| GATTCATATGGAGAGACAGT+AGG | + | chr7.3:27342119-27342138 | None:intergenic | 40.0% | |
| GCTATTACATAGGCAACAAC+AGG | - | chr7.3:27341691-27341710 | MS.gene51157:intron | 40.0% | |
| GGAGAAGGCTTGAATTATCT+CGG | - | chr7.3:27342954-27342973 | MS.gene51157:CDS | 40.0% | |
| GTGTGAAACTAAACTAGGGT+GGG | - | chr7.3:27339779-27339798 | MS.gene51157:intron | 40.0% | |
| TAGAAGCGATGCAATCATTG+TGG | - | chr7.3:27340904-27340923 | MS.gene51157:intron | 40.0% | |
| TCAATCACTGTAATGCAGGT+TGG | - | chr7.3:27342005-27342024 | MS.gene51157:intron | 40.0% | |
| TCTCGGTCAGTGATTTAGAT+TGG | + | chr7.3:27341552-27341571 | None:intergenic | 40.0% | |
| TCTTCAACCGTTACCAGATA+CGG | - | chr7.3:27342052-27342071 | MS.gene51157:intron | 40.0% | |
| TGCTTTGCATTTGCAGATGA+TGG | + | chr7.3:27339397-27339416 | None:intergenic | 40.0% | |
| TGGGTGATCGAGATATGTAA+AGG | + | chr7.3:27341532-27341551 | None:intergenic | 40.0% | |
| TGTACTTTGTGTGAGCAACA+AGG | + | chr7.3:27339716-27339735 | None:intergenic | 40.0% | |
| TGTGAAACTAAACTAGGGTG+GGG | - | chr7.3:27339780-27339799 | MS.gene51157:intron | 40.0% | |
| TGTGTGAAACTAAACTAGGG+TGG | - | chr7.3:27339778-27339797 | MS.gene51157:intron | 40.0% | |
| ! | CACCCTTTGCAACATTTTAG+AGG | - | chr7.3:27339829-27339848 | MS.gene51157:intron | 40.0% |
| ! | CATTACCTTCTTGGTGTAAC+AGG | - | chr7.3:27340803-27340822 | MS.gene51157:intron | 40.0% |
| ! | CCTAGTTTAGTTTCACACAC+TGG | + | chr7.3:27339777-27339796 | None:intergenic | 40.0% |
| ! | GCAATTTTCCCGACAAATGA+GGG | - | chr7.3:27340322-27340341 | MS.gene51157:CDS | 40.0% |
| ! | TACTTTTACTGCAGGAAGTC+CGG | - | chr7.3:27341650-27341669 | MS.gene51157:intron | 40.0% |
| ! | TGCAATTTTCCCGACAAATG+AGG | - | chr7.3:27340321-27340340 | MS.gene51157:CDS | 40.0% |
| ! | TTCGTCTGGAGTAATTCACA+AGG | - | chr7.3:27341327-27341346 | MS.gene51157:CDS | 40.0% |
| ! | TTCTCCCCATGATCTCTTTT+GGG | - | chr7.3:27342917-27342936 | MS.gene51157:CDS | 40.0% |
| !! | AATCGATGTTTGCTATCAGC+AGG | - | chr7.3:27341889-27341908 | MS.gene51157:intron | 40.0% |
| !! | ACGTTTTCGCCATTTTCATC+AGG | + | chr7.3:27342218-27342237 | None:intergenic | 40.0% |
| !! | CTTTCAGTTTTCTGGGAATG+TGG | - | chr7.3:27341280-27341299 | MS.gene51157:CDS | 40.0% |
| !! | GGATTGCAAGTTGATCTTCT+TGG | - | chr7.3:27339880-27339899 | MS.gene51157:intron | 40.0% |
| !! | TAATCTTGGCCGTTGATTTG+AGG | + | chr7.3:27341619-27341638 | None:intergenic | 40.0% |
| !! | TCAAAGGAGCGTTAACAAGA+AGG | + | chr7.3:27340623-27340642 | None:intergenic | 40.0% |
| !!! | GAGGGTATCTTTCAGTTTTC+TGG | - | chr7.3:27341272-27341291 | MS.gene51157:CDS | 40.0% |
| AAACCTATGGGACATGTCTG+AGG | - | chr7.3:27341120-27341139 | MS.gene51157:CDS | 45.0% | |
| AAACCTCAGACATGTCCCAT+AGG | + | chr7.3:27341126-27341145 | None:intergenic | 45.0% | |
| AAACTAGGGTGGGGTCAAAA+GGG | - | chr7.3:27339789-27339808 | MS.gene51157:intron | 45.0% | |
| AAAGAATGCACCATCTCCTG+TGG | - | chr7.3:27341826-27341845 | MS.gene51157:intron | 45.0% | |
| AAGAATGCACCATCTCCTGT+GGG | - | chr7.3:27341827-27341846 | MS.gene51157:intron | 45.0% | |
| AATGCTAGTAAGTCCCGTGA+GGG | - | chr7.3:27340235-27340254 | MS.gene51157:CDS | 45.0% | |
| ACCCCTCTGTGTTACAACTA+TGG | + | chr7.3:27341152-27341171 | None:intergenic | 45.0% | |
| ACTTCTCCTCATCCCAACTT+CGG | - | chr7.3:27339498-27339517 | MS.gene51157:CDS | 45.0% | |
| CAACAACAGGGTCACATAGT+TGG | - | chr7.3:27341704-27341723 | MS.gene51157:intron | 45.0% | |
| CAACAAGGCAAACCTGAAGT+AGG | + | chr7.3:27339701-27339720 | None:intergenic | 45.0% | |
| CCAGAAGAAGCTGCTAGAAT+AGG | - | chr7.3:27342422-27342441 | MS.gene51157:intron | 45.0% | |
| CCTATTCTAGCAGCTTCTTC+TGG | + | chr7.3:27342425-27342444 | None:intergenic | 45.0% | |
| CGGCCAAGATTATTACTGTG+TGG | - | chr7.3:27341627-27341646 | MS.gene51157:intron | 45.0% | |
| CTCATTCTGATTGACCCTCA+CGG | + | chr7.3:27340252-27340271 | None:intergenic | 45.0% | |
| GCAGCATAGAACTCAAATGC+GGG | + | chr7.3:27342866-27342885 | None:intergenic | 45.0% | |
| GGAAAAATTGCTGCTAGCAC+TGG | - | chr7.3:27340824-27340843 | MS.gene51157:intron | 45.0% | |
| GGGGTCAAAAGGGTTGTTAT+TGG | - | chr7.3:27339799-27339818 | MS.gene51157:intron | 45.0% | |
| GTGTACTGTACAGTGACTTG+TGG | - | chr7.3:27340011-27340030 | MS.gene51157:CDS | 45.0% | |
| TAAACTAGGGTGGGGTCAAA+AGG | - | chr7.3:27339788-27339807 | MS.gene51157:intron | 45.0% | |
| TAATGCTAGTAAGTCCCGTG+AGG | - | chr7.3:27340234-27340253 | MS.gene51157:CDS | 45.0% | |
| TAGCTCGCAGCTCAAAAACT+AGG | + | chr7.3:27340886-27340905 | None:intergenic | 45.0% | |
| TCAAACTCTTGGGGTCTGTT+TGG | - | chr7.3:27342506-27342525 | MS.gene51157:CDS | 45.0% | |
| TCAGGCATTTGAATGGGATG+AGG | + | chr7.3:27342200-27342219 | None:intergenic | 45.0% | |
| TCATTCTGATTGACCCTCAC+GGG | + | chr7.3:27340251-27340270 | None:intergenic | 45.0% | |
| TTCCATGTTCAGGTAAGCAG+TGG | + | chr7.3:27339640-27339659 | None:intergenic | 45.0% | |
| ! | ACTTTTACTGCAGGAAGTCC+GGG | - | chr7.3:27341651-27341670 | MS.gene51157:intron | 45.0% |
| ! | CCCTTAATCTAAAGCAGACC+CGG | + | chr7.3:27341672-27341691 | None:intergenic | 45.0% |
| ! | CCGGGTCTGCTTTAGATTAA+GGG | - | chr7.3:27341669-27341688 | MS.gene51157:intron | 45.0% |
| ! | CTGTGTGGTACTTTTACTGC+AGG | - | chr7.3:27341642-27341661 | MS.gene51157:intron | 45.0% |
| ! | CTTCTCCCCATGATCTCTTT+TGG | - | chr7.3:27342916-27342935 | MS.gene51157:CDS | 45.0% |
| ! | TCCGGGTCTGCTTTAGATTA+AGG | - | chr7.3:27341668-27341687 | MS.gene51157:intron | 45.0% |
| ! | TCTCCCCATGATCTCTTTTG+GGG | - | chr7.3:27342918-27342937 | MS.gene51157:CDS | 45.0% |
| !! | AAACGTGACTTGGTTGAGTG+TGG | - | chr7.3:27342232-27342251 | MS.gene51157:intron | 45.0% |
| !! | CTCCCTTTGAAATTGAAGGG+AGG | - | chr7.3:27340286-27340305 | MS.gene51157:CDS | 45.0% |
| !! | GCAAGTTGATCTTCTTGGAG+AGG | - | chr7.3:27339885-27339904 | MS.gene51157:intron | 45.0% |
| !! | TCAGTTTTCTGGGAATGTGG+AGG | - | chr7.3:27341283-27341302 | MS.gene51157:CDS | 45.0% |
| !! | TCCTCTGGTGATGGAATTGT+CGG | + | chr7.3:27342080-27342099 | None:intergenic | 45.0% |
| !! | TCTATGCTGCTTTCAACTGC+CGG | - | chr7.3:27342876-27342895 | MS.gene51157:CDS | 45.0% |
| ACCGACAATTCCATCACCAG+AGG | - | chr7.3:27342076-27342095 | MS.gene51157:intron | 50.0% | |
| ACCTGCAGATAAGGCCTGAT+TGG | - | chr7.3:27342784-27342803 | MS.gene51157:CDS | 50.0% | |
| AGATTGACAGCCAGACATGG+AGG | - | chr7.3:27341040-27341059 | MS.gene51157:intron | 50.0% | |
| AGCCACTGCTTACCTGAACA+TGG | - | chr7.3:27339635-27339654 | MS.gene51157:intron | 50.0% | |
| AGCCTCAACTAGAACCGAAC+CGG | + | chr7.3:27342898-27342917 | None:intergenic | 50.0% | |
| AGCGATGCAATCATTGTGGG+AGG | - | chr7.3:27340908-27340927 | MS.gene51157:intron | 50.0% | |
| AGTCACCAGGTTCCATGTTC+AGG | + | chr7.3:27339650-27339669 | None:intergenic | 50.0% | |
| AGTTGCACTCATACCCTGTG+AGG | + | chr7.3:27340402-27340421 | None:intergenic | 50.0% | |
| ATGAGGAGAAGTGAAACCGG+CGG | + | chr7.3:27339490-27339509 | None:intergenic | 50.0% | |
| ATGGAACCTGGTGACTGTGA+CGG | - | chr7.3:27339654-27339673 | MS.gene51157:intron | 50.0% | |
| CAGAAGCTGCTTGCGTCTAA+AGG | - | chr7.3:27341187-27341206 | MS.gene51157:CDS | 50.0% | |
| CATCTCCTGTGGGTGATCTT+GGG | - | chr7.3:27341837-27341856 | MS.gene51157:intron | 50.0% | |
| CCAAGATTGACAGCCAGACA+TGG | - | chr7.3:27341037-27341056 | MS.gene51157:intron | 50.0% | |
| CCATGTCTGGCTGTCAATCT+TGG | + | chr7.3:27341040-27341059 | None:intergenic | 50.0% | |
| CCTGCAGATAAGGCCTGATT+GGG | - | chr7.3:27342785-27342804 | MS.gene51157:CDS | 50.0% | |
| CGTGAGGGTCAATCAGAATG+AGG | - | chr7.3:27340250-27340269 | MS.gene51157:CDS | 50.0% | |
| CTGGGAATGTGGAGGAACAT+TGG | - | chr7.3:27341291-27341310 | MS.gene51157:CDS | 50.0% | |
| CTTTAGACGCAAGCAGCTTC+TGG | + | chr7.3:27341189-27341208 | None:intergenic | 50.0% | |
| GAAATTGAAGGGAGGTTGCC+AGG | - | chr7.3:27340294-27340313 | MS.gene51157:CDS | 50.0% | |
| GCTATGACTCTCGATGGTGA+GGG | - | chr7.3:27340687-27340706 | MS.gene51157:intron | 50.0% | |
| GCTTACCTGAACATGGAACC+TGG | - | chr7.3:27339642-27339661 | MS.gene51157:intron | 50.0% | |
| GGAAGTAACGGCCTGAACTT+CGG | + | chr7.3:27339595-27339614 | None:intergenic | 50.0% | |
| GGATTTGTCAGCGATGAGAG+CGG | + | chr7.3:27339469-27339488 | None:intergenic | 50.0% | |
| GGGAGGAAATACGGTTCGAA+GGG | - | chr7.3:27340925-27340944 | MS.gene51157:intron | 50.0% | |
| GGGATGAGGAGAAGTGAAAC+CGG | + | chr7.3:27339493-27339512 | None:intergenic | 50.0% | |
| GTGCGTGCACTTAGAAGTCA+AGG | - | chr7.3:27339859-27339878 | MS.gene51157:intron | 50.0% | |
| GTGTTGGGTCATACCAGATC+AGG | + | chr7.3:27342470-27342489 | None:intergenic | 50.0% | |
| TCCAGAGGAGGCAAACCTAT+GGG | - | chr7.3:27341108-27341127 | MS.gene51157:CDS | 50.0% | |
| TCCGCCCCAAAAGAGATCAT+GGG | + | chr7.3:27342925-27342944 | None:intergenic | 50.0% | |
| TCGGGAAAATTGCACCAACC+TGG | + | chr7.3:27340315-27340334 | None:intergenic | 50.0% | |
| TGCAGCTTATCCACCATGCA+TGG | + | chr7.3:27340850-27340869 | None:intergenic | 50.0% | |
| TGCTATGACTCTCGATGGTG+AGG | - | chr7.3:27340686-27340705 | MS.gene51157:intron | 50.0% | |
| TGGGAGGAAATACGGTTCGA+AGG | - | chr7.3:27340924-27340943 | MS.gene51157:intron | 50.0% | |
| TTCCAGAGGAGGCAAACCTA+TGG | - | chr7.3:27341107-27341126 | MS.gene51157:CDS | 50.0% | |
| ! | GAGTGTGGAGCATTACTACC+AGG | - | chr7.3:27342247-27342266 | MS.gene51157:intron | 50.0% |
| ! | GGTCCAGACATGCTTGTTAG+TGG | - | chr7.3:27342026-27342045 | MS.gene51157:intron | 50.0% |
| ! | TTGTAACACAGAGGGGTGCA+AGG | - | chr7.3:27341155-27341174 | MS.gene51157:CDS | 50.0% |
| ACAAAGGCAGCGTCCTGATC+TGG | - | chr7.3:27342454-27342473 | MS.gene51157:intron | 55.0% | |
| ACCATCCCAAGATCACCCAC+AGG | + | chr7.3:27341845-27341864 | None:intergenic | 55.0% | |
| CATATGCCCACCTCCATGTC+TGG | + | chr7.3:27341053-27341072 | None:intergenic | 55.0% | |
| CCAAGATCACCCACAGGAGA+TGG | + | chr7.3:27341839-27341858 | None:intergenic | 55.0% | |
| CCATCTCCTGTGGGTGATCT+TGG | - | chr7.3:27341836-27341855 | MS.gene51157:intron | 55.0% | |
| CCGCCCCAAAAGAGATCATG+GGG | + | chr7.3:27342924-27342943 | None:intergenic | 55.0% | |
| CGCGTAGAGGTAACCTTCAC+CGG | + | chr7.3:27339556-27339575 | None:intergenic | 55.0% | |
| CTCATCGCTGACAAATCCGC+CGG | - | chr7.3:27339471-27339490 | MS.gene51157:CDS | 55.0% | |
| CTCCGCCCCAAAAGAGATCA+TGG | + | chr7.3:27342926-27342945 | None:intergenic | 55.0% | |
| GAAGGTTACCTCTACGCGCA+AGG | - | chr7.3:27339558-27339577 | MS.gene51157:CDS | 55.0% | |
| TAACGGCCTGAACTTCGGCA+GGG | + | chr7.3:27339590-27339609 | None:intergenic | 55.0% | |
| TCAGGTAAGCAGTGGCTCCA+CGG | + | chr7.3:27339632-27339651 | None:intergenic | 55.0% | |
| TCAGTCCCTCGATCTTCCAG+AGG | - | chr7.3:27341093-27341112 | MS.gene51157:CDS | 55.0% | |
| TCCAACGAACTTGTGCGCCT+AGG | + | chr7.3:27342348-27342367 | None:intergenic | 55.0% | |
| TCCCATAGGTTTGCCTCCTC+TGG | + | chr7.3:27341112-27341131 | None:intergenic | 55.0% | |
| TCCTGTGGGTGATCTTGGGA+TGG | - | chr7.3:27341841-27341860 | MS.gene51157:intron | 55.0% | |
| TGACAGCCAGACATGGAGGT+GGG | - | chr7.3:27341044-27341063 | MS.gene51157:intron | 55.0% | |
| TGCTGTGTCTGCCCTACTTC+AGG | - | chr7.3:27339686-27339705 | MS.gene51157:intron | 55.0% | |
| TTGAAGGGAGGTTGCCAGGT+TGG | - | chr7.3:27340298-27340317 | MS.gene51157:CDS | 55.0% | |
| TTGACAGCCAGACATGGAGG+TGG | - | chr7.3:27341043-27341062 | MS.gene51157:intron | 55.0% | |
| TTGTCACCGTCACAGTCACC+AGG | + | chr7.3:27339663-27339682 | None:intergenic | 55.0% | |
| ! | CCCAATCAGGCCTTATCTGC+AGG | + | chr7.3:27342788-27342807 | None:intergenic | 55.0% |
| ! | GCTGCTTTCAACTGCCGGTT+CGG | - | chr7.3:27342881-27342900 | MS.gene51157:CDS | 55.0% |
| ! | TGCCTCCTCTGGAAGATCGA+GGG | + | chr7.3:27341101-27341120 | None:intergenic | 55.0% |
| ! | TTGCCTCCTCTGGAAGATCG+AGG | + | chr7.3:27341102-27341121 | None:intergenic | 55.0% |
| !! | CCCCATGATCTCTTTTGGGG+CGG | - | chr7.3:27342921-27342940 | MS.gene51157:CDS | 55.0% |
| !! | GCTGCGTCTGCTATTTCGTC+TGG | - | chr7.3:27341313-27341332 | MS.gene51157:CDS | 55.0% |
| !! | GGAATTGTCGGTGCCGTATC+TGG | + | chr7.3:27342068-27342087 | None:intergenic | 55.0% |
| !! | GTCGGTGCCGTATCTGGTAA+CGG | + | chr7.3:27342062-27342081 | None:intergenic | 55.0% |
| !! | TGCCGGTTCGGTTCTAGTTG+AGG | - | chr7.3:27342893-27342912 | MS.gene51157:CDS | 55.0% |
| !!! | CATGATCTCTTTTGGGGCGG+AGG | - | chr7.3:27342924-27342943 | MS.gene51157:CDS | 55.0% |
| AACGGCCTGAACTTCGGCAG+GGG | + | chr7.3:27339589-27339608 | None:intergenic | 60.0% | |
| ACGCAGCCGAAGTTGGGATG+AGG | + | chr7.3:27339507-27339526 | None:intergenic | 60.0% | |
| GCCTAGGCGCACAAGTTCGT+TGG | - | chr7.3:27342344-27342363 | MS.gene51157:intron | 60.0% | |
| GCGATGACGCAGCCGAAGTT+GGG | + | chr7.3:27339513-27339532 | None:intergenic | 60.0% | |
| GGCGCACAAGTTCGTTGGAG+TGG | - | chr7.3:27342349-27342368 | MS.gene51157:intron | 60.0% | |
| GTAACGGCCTGAACTTCGGC+AGG | + | chr7.3:27339591-27339610 | None:intergenic | 60.0% | |
| GTCCCTCGATCTTCCAGAGG+AGG | - | chr7.3:27341096-27341115 | MS.gene51157:CDS | 60.0% | |
| GTTCAGGCCGTTACTTCCGC+CGG | - | chr7.3:27339597-27339616 | MS.gene51157:CDS | 60.0% | |
| TACCTCCCCTGCCGAAGTTC+AGG | - | chr7.3:27339581-27339600 | MS.gene51157:CDS | 60.0% | |
| !! | CTAGCACTGGCCATGCATGG+TGG | - | chr7.3:27340837-27340856 | MS.gene51157:intron | 60.0% |
| !! | CTGCTAGCACTGGCCATGCA+TGG | - | chr7.3:27340834-27340853 | MS.gene51157:intron | 60.0% |
| !!! | TTTTGGGGCGGAGGTCGAGA+AGG | - | chr7.3:27342933-27342952 | MS.gene51157:CDS | 60.0% |
| ACCTTCACCGGCGACATCGC+CGG | + | chr7.3:27339544-27339563 | None:intergenic | 65.0% | |
| ACGCTCGCCGGCGGAAGTAA+CGG | + | chr7.3:27339607-27339626 | None:intergenic | 65.0% | |
| AGCGGCGCGTCGGATATACC+CGG | + | chr7.3:27339451-27339470 | None:intergenic | 65.0% | |
| GGCGATGACGCAGCCGAAGT+TGG | + | chr7.3:27339514-27339533 | None:intergenic | 65.0% | |
| GGCGGAGGTCGAGAAGGAGA+AGG | - | chr7.3:27342939-27342958 | MS.gene51157:CDS | 65.0% | |
| !! | GGGAGGTACCTTGCGCGTAG+AGG | + | chr7.3:27339569-27339588 | None:intergenic | 65.0% |
| ACAACCACGCGCTCGACGCC+GGG | - | chr7.3:27339430-27339449 | MS.gene51157:CDS | 70.0% | |
| CACAACCACGCGCTCGACGC+CGG | - | chr7.3:27339429-27339448 | MS.gene51157:CDS | 70.0% | |
| CAGCGATGAGAGCGGCGCGT+CGG | + | chr7.3:27339461-27339480 | None:intergenic | 70.0% | |
| GGCCTGAACTTCGGCAGGGG+AGG | + | chr7.3:27339586-27339605 | None:intergenic | 70.0% | |
| TCACCGGCGACATCGCCGGA+GGG | + | chr7.3:27339540-27339559 | None:intergenic | 70.0% | |
| TCCGGCGATGTCGCCGGTGA+AGG | - | chr7.3:27339540-27339559 | MS.gene51157:CDS | 70.0% | |
| TGCGTCATCGCCACCCCCTC+CGG | - | chr7.3:27339522-27339541 | MS.gene51157:CDS | 70.0% | |
| TTCACCGGCGACATCGCCGG+AGG | + | chr7.3:27339541-27339560 | None:intergenic | 70.0% | |
| ! | TATACCCGGCGTCGAGCGCG+TGG | + | chr7.3:27339437-27339456 | None:intergenic | 70.0% |
| ACCCCCTCCGGCGATGTCGC+CGG | - | chr7.3:27339534-27339553 | MS.gene51157:CDS | 75.0% | |
| ACCGGCGACATCGCCGGAGG+GGG | + | chr7.3:27339538-27339557 | None:intergenic | 75.0% | |
| CACCGGCGACATCGCCGGAG+GGG | + | chr7.3:27339539-27339558 | None:intergenic | 75.0% | |
| GGCTCCACGGCAACGCTCGC+CGG | + | chr7.3:27339619-27339638 | None:intergenic | 75.0% | |
| TCCACGGCAACGCTCGCCGG+CGG | + | chr7.3:27339616-27339635 | None:intergenic | 75.0% | |
| ! | GGCGACATCGCCGGAGGGGG+TGG | + | chr7.3:27339535-27339554 | None:intergenic | 80.0% |
| !! | TCCGCCGGCGAGCGTTGCCG+TGG | - | chr7.3:27339612-27339631 | MS.gene51157:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 27339351 | 27343058 | 27339351 | ID=MS.gene51157 |
| chr7.3 | mRNA | 27339351 | 27343058 | 27339351 | ID=MS.gene51157.t1;Parent=MS.gene51157 |
| chr7.3 | exon | 27342702 | 27343058 | 27342702 | ID=MS.gene51157.t1.exon1;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27342702 | 27343058 | 27342702 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27342476 | 27342613 | 27342476 | ID=MS.gene51157.t1.exon2;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27342476 | 27342613 | 27342476 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27341707 | 27341806 | 27341707 | ID=MS.gene51157.t1.exon3;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27341707 | 27341806 | 27341707 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27341459 | 27341584 | 27341459 | ID=MS.gene51157.t1.exon4;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27341459 | 27341584 | 27341459 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27341061 | 27341374 | 27341061 | ID=MS.gene51157.t1.exon5;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27341061 | 27341374 | 27341061 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27340499 | 27340618 | 27340499 | ID=MS.gene51157.t1.exon6;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27340499 | 27340618 | 27340499 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27340141 | 27340386 | 27340141 | ID=MS.gene51157.t1.exon7;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27340141 | 27340386 | 27340141 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27339934 | 27340059 | 27339934 | ID=MS.gene51157.t1.exon8;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27339934 | 27340059 | 27339934 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| chr7.3 | exon | 27339351 | 27339617 | 27339351 | ID=MS.gene51157.t1.exon9;Parent=MS.gene51157.t1 |
| chr7.3 | CDS | 27339351 | 27339617 | 27339351 | ID=cds.MS.gene51157.t1;Parent=MS.gene51157.t1 |
| Gene Sequence |
| Protein sequence |
