AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054600.t1 MTR_4g007140 95.402 174 8 0 1 174 3 176 5.41e-120 340
MS.gene054600.t1 MTR_2g105090 71.591 176 43 4 1 174 3 173 8.99e-76 228
MS.gene054600.t1 MTR_2g105090 63.000 200 43 5 1 174 3 197 7.56e-70 214
MS.gene054600.t1 MTR_1g112170 68.421 95 30 0 80 174 69 163 3.55e-41 139
MS.gene054600.t1 MTR_1g112170 68.421 95 30 0 80 174 69 163 9.51e-41 139
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054600.t1 AT1G16880 64.626 147 50 2 28 174 29 173 4.19e-60 186
MS.gene054600.t1 AT1G16880 64.626 147 50 2 28 174 29 173 4.05e-59 186
MS.gene054600.t1 AT5G04740 66.000 100 34 0 75 174 85 184 4.07e-42 143

Find 30 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAATAGTTTGAGAGTTT+TGG 0.215649 4.1:+88247110 MS.gene054600:CDS
TCTTGGTCAATTATGACTAT+TGG 0.255614 4.1:-88248648 None:intergenic
TTTGTCAGGTTGTTATCTTC+TGG 0.262379 4.1:+88248401 MS.gene054600:intron
CTTGGTCAATTATGACTATT+GGG 0.278108 4.1:-88248647 None:intergenic
ATCTCCACCACAGTTGCATC+TGG 0.413372 4.1:-88248678 None:intergenic
CTTAGGCCTCAATGTTGTTA+AGG 0.415434 4.1:+88248839 MS.gene054600:CDS
GTTACTTTCTTCACAAAAGA+AGG 0.417045 4.1:+88247196 MS.gene054600:CDS
GCTATGAGTGCTTTGAGACT+TGG 0.418351 4.1:+88247066 MS.gene054600:CDS
AGTACCTGCACATCAGTAAC+AGG 0.435514 4.1:-88248452 None:intergenic
GGAAGATCCAGAGTTGTTAG+AGG 0.470609 4.1:+88249684 MS.gene054600:CDS
TGGAGATAACTTTCGGTGAT+CGG 0.475265 4.1:+88248694 MS.gene054600:CDS
CGAATTGCCTCTAACAACTC+TGG 0.479030 4.1:-88249691 None:intergenic
ATAACTTTCGGTGATCGGCT+TGG 0.510246 4.1:+88248699 MS.gene054600:CDS
CAGTGATACTGGCCGAAAAG+TGG 0.519005 4.1:+88249663 MS.gene054600:intron
GGATATCAGGGTGGAAATCA+AGG 0.522473 4.1:+88248603 MS.gene054600:intron
AGCACCTGTTACTGATGTGC+AGG 0.531571 4.1:+88248448 MS.gene054600:CDS
TTGCATCTGGATCCAAGTCT+TGG 0.535486 4.1:-88248665 None:intergenic
CATTTGCCTTAACAACATTG+AGG 0.567718 4.1:-88248845 None:intergenic
AGTCATAATTGACCAAGACT+TGG 0.567923 4.1:+88248653 MS.gene054600:CDS
GTAACAGGTGCTGCCGCTCG+AGG 0.568447 4.1:-88248437 None:intergenic
TAACAGGTGCTGCCGCTCGA+GGG 0.586405 4.1:-88248436 None:intergenic
TCAATTATGACTATTGGGGT+CGG 0.614778 4.1:-88248642 None:intergenic
TATGACTATTGGGGTCGGAA+CGG 0.615998 4.1:-88248637 None:intergenic
ACTGTGGTGGAGATAACTTT+CGG 0.631847 4.1:+88248687 MS.gene054600:CDS
TTGGTCAATTATGACTATTG+GGG 0.653500 4.1:-88248646 None:intergenic
CTTGGATCCAGATGCAACTG+TGG 0.661276 4.1:+88248671 MS.gene054600:CDS
AACTACTATTATCCCTCGAG+CGG 0.661528 4.1:+88248424 MS.gene054600:CDS
ATGAGTGCATTAAAAGACTT+AGG 0.662772 4.1:+88248822 MS.gene054600:CDS
TAATCTGATTCAGTATCACC+CGG 0.667172 4.1:+88249729 MS.gene054600:CDS
GGATCCAGATGCAACTGTGG+TGG 0.679796 4.1:+88248674 MS.gene054600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTGAATTAAAAAAAAA+GGG - chr4.1:88248139-88248158 None:intergenic 10.0%
!! AACAAATATATATTCAAAAG+TGG - chr4.1:88247956-88247975 None:intergenic 15.0%
!! ACAAATATATATTCAAAAGT+GGG - chr4.1:88247955-88247974 None:intergenic 15.0%
!! ATTTGTTTATAAAATTGTAG+TGG + chr4.1:88247969-88247988 MS.gene054600:intron 15.0%
!! CAAATCTGAATTAAAAAAAA+AGG - chr4.1:88248140-88248159 None:intergenic 15.0%
!! TTATTCTGTTTATTTAGATT+TGG + chr4.1:88248058-88248077 MS.gene054600:intron 15.0%
!!! TAAGCTATTTCTATAATAAA+AGG + chr4.1:88249242-88249261 MS.gene054600:intron 15.0%
!!! TTATTTTTGTTTCTTTTATG+TGG + chr4.1:88248582-88248601 MS.gene054600:intron 15.0%
!! ACTAATTAAGTTAGTAGATT+AGG + chr4.1:88248225-88248244 MS.gene054600:intron 20.0%
!! TCATAAATCATATCTATGAA+TGG - chr4.1:88247430-88247449 None:intergenic 20.0%
!! TTGAATTTCTAATACTGTTT+AGG - chr4.1:88249519-88249538 None:intergenic 20.0%
!!! AAACAATGTGACTTTTTTTT+TGG - chr4.1:88249291-88249310 None:intergenic 20.0%
!!! AATAGTAAACATTTGAAACT+TGG + chr4.1:88248295-88248314 MS.gene054600:intron 20.0%
!!! ATAGTAAACATTTGAAACTT+GGG + chr4.1:88248296-88248315 MS.gene054600:intron 20.0%
!!! ATCGGCTTATAATTTTTTTA+TGG - chr4.1:88247608-88247627 None:intergenic 20.0%
! ATACAATTAACACACAGAAA+TGG - chr4.1:88248363-88248382 None:intergenic 25.0%
! ATTAAGTTAGTAGATTAGGT+TGG + chr4.1:88248229-88248248 MS.gene054600:intron 25.0%
! ATTTCTAATACTGTTTAGGT+AGG - chr4.1:88249515-88249534 None:intergenic 25.0%
! GATTCACAATTCACAAAAAT+AGG - chr4.1:88247518-88247537 None:intergenic 25.0%
! TACAATTAACACACAGAAAT+GGG - chr4.1:88248362-88248381 None:intergenic 25.0%
! TATTCAAAAGTGGGTATAAT+TGG - chr4.1:88247946-88247965 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAT+AGG + chr4.1:88249420-88249439 MS.gene054600:intron 25.0%
! TTAAATCTTGAATTACTTCG+AGG - chr4.1:88247645-88247664 None:intergenic 25.0%
! TTCTTCATGAAAATAAGACA+AGG - chr4.1:88248179-88248198 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr4.1:88249193-88249212 None:intergenic 25.0%
!! CAAGATATTTGTTGCTTAAA+AGG - chr4.1:88249585-88249604 None:intergenic 25.0%
!! CTTTTAAGCAACAAATATCT+TGG + chr4.1:88249583-88249602 MS.gene054600:intron 25.0%
!! TGATAATAGTTTGAGAGTTT+TGG + chr4.1:88247110-88247129 MS.gene054600:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr4.1:88249192-88249211 None:intergenic 25.0%
!! TTAGAATTTGAGCTTTTAGT+AGG + chr4.1:88247320-88247339 MS.gene054600:intron 25.0%
!! TTTCTTTTATGTGGATATCA+GGG + chr4.1:88248591-88248610 MS.gene054600:intron 25.0%
!!! ATGTATACTGATTCATTGTA+AGG - chr4.1:88247757-88247776 None:intergenic 25.0%
AAAAAAGGGACACAGAAAAT+GGG - chr4.1:88247141-88247160 None:intergenic 30.0%
AAGATAACAACCTGACAAAA+GGG - chr4.1:88248400-88248419 None:intergenic 30.0%
AATATCTGAGAGTTTCAGTT+GGG - chr4.1:88249086-88249105 None:intergenic 30.0%
ACAAAGTTGACAAAAACAAG+TGG + chr4.1:88247703-88247722 MS.gene054600:intron 30.0%
AGCATTATAGAGATGAACTA+TGG - chr4.1:88248531-88248550 None:intergenic 30.0%
AGTATACATCATAGTGAATC+AGG + chr4.1:88247768-88247787 MS.gene054600:intron 30.0%
ATGAGTGCATTAAAAGACTT+AGG + chr4.1:88248822-88248841 MS.gene054600:CDS 30.0%
CTTGGTCAATTATGACTATT+GGG - chr4.1:88248650-88248669 None:intergenic 30.0%
GCATTATAGAGATGAACTAT+GGG - chr4.1:88248530-88248549 None:intergenic 30.0%
TATAGACTAACCTTAGGTAA+TGG + chr4.1:88247729-88247748 MS.gene054600:intron 30.0%
TCTTGGTCAATTATGACTAT+TGG - chr4.1:88248651-88248670 None:intergenic 30.0%
TGCATTGCATATGTTAATTC+TGG + chr4.1:88248027-88248046 MS.gene054600:intron 30.0%
TTGGTCAATTATGACTATTG+GGG - chr4.1:88248649-88248668 None:intergenic 30.0%
! AATGTTTTTCTGGATTCTTC+TGG + chr4.1:88248864-88248883 MS.gene054600:CDS 30.0%
! CTTTGATCATTGGTTACTTA+TGG + chr4.1:88247227-88247246 MS.gene054600:intron 30.0%
! CTTTTGTGAAGAAAGTAACA+TGG - chr4.1:88247195-88247214 None:intergenic 30.0%
! GAGGTGTATTTTCGATATAT+CGG - chr4.1:88247626-88247645 None:intergenic 30.0%
! GTTACTTTCTTCACAAAAGA+AGG + chr4.1:88247196-88247215 MS.gene054600:CDS 30.0%
! GTTTCTTTTATGTGGATATC+AGG + chr4.1:88248590-88248609 MS.gene054600:intron 30.0%
! TAATACTTACGCTTTTGTGA+TGG - chr4.1:88248907-88248926 None:intergenic 30.0%
! TGTTAAGGCAAATGTTTTTC+TGG + chr4.1:88248854-88248873 MS.gene054600:CDS 30.0%
! TTACTGCTCTTTCTTTTGTA+TGG + chr4.1:88248269-88248288 MS.gene054600:intron 30.0%
! TTTTTACCGATCAACAAACA+CGG - chr4.1:88248560-88248579 None:intergenic 30.0%
!! ATCTGTAGCTTTTTCTTAGA+GGG + chr4.1:88248778-88248797 MS.gene054600:intron 30.0%
!! CAGAAGAAGCATTCAAAAAA+GGG - chr4.1:88247155-88247174 None:intergenic 30.0%
!! GGAACTCATTGACTTATATT+TGG + chr4.1:88247990-88248009 MS.gene054600:intron 30.0%
!! TAGATTAGGTTGGATAAGTA+CGG + chr4.1:88248239-88248258 MS.gene054600:intron 30.0%
!! TATCTGTAGCTTTTTCTTAG+AGG + chr4.1:88248777-88248796 MS.gene054600:intron 30.0%
!! TATTTTATTTACTCCACCAC+TGG + chr4.1:88249109-88249128 MS.gene054600:intron 30.0%
AACATATGCAATGCAAGCAA+AGG - chr4.1:88248022-88248041 None:intergenic 35.0%
AGCAACAAATATCTTGGATG+AGG + chr4.1:88249589-88249608 MS.gene054600:intron 35.0%
AGTCATAATTGACCAAGACT+TGG + chr4.1:88248653-88248672 MS.gene054600:CDS 35.0%
ATTAAAAAAAAAGGGCAGCC+CGG - chr4.1:88248131-88248150 None:intergenic 35.0%
CAAAAAAGGGACACAGAAAA+TGG - chr4.1:88247142-88247161 None:intergenic 35.0%
CAGAAATGGGCATATTACTT+TGG - chr4.1:88248349-88248368 None:intergenic 35.0%
CATTTGCCTTAACAACATTG+AGG - chr4.1:88248848-88248867 None:intergenic 35.0%
CGCTTCTTTAGTAATTCCTT+GGG + chr4.1:88249620-88249639 MS.gene054600:intron 35.0%
GAAGATAACAACCTGACAAA+AGG - chr4.1:88248401-88248420 None:intergenic 35.0%
GAATATCTGAGAGTTTCAGT+TGG - chr4.1:88249087-88249106 None:intergenic 35.0%
GCAAATAACGACAATCACAT+AGG - chr4.1:88248490-88248509 None:intergenic 35.0%
TATCTATAAGTTCTCCACGA+TGG - chr4.1:88249336-88249355 None:intergenic 35.0%
TCAAACGTCGTCATAATACT+CGG - chr4.1:88247453-88247472 None:intergenic 35.0%
TCAATTATGACTATTGGGGT+CGG - chr4.1:88248645-88248664 None:intergenic 35.0%
TCGCTTCTTTAGTAATTCCT+TGG + chr4.1:88249619-88249638 MS.gene054600:intron 35.0%
TGGATGTATAGACTAACCTT+AGG + chr4.1:88247723-88247742 MS.gene054600:intron 35.0%
TTAGAGTAGATGGTGCAATT+AGG - chr4.1:88249165-88249184 None:intergenic 35.0%
TTGTAAGGAACCATTACCTA+AGG - chr4.1:88247742-88247761 None:intergenic 35.0%
! AGCTTTTAGTAGGTGGTTAA+TGG + chr4.1:88247330-88247349 MS.gene054600:intron 35.0%
! GAATTTGAGCTTTTAGTAGG+TGG + chr4.1:88247323-88247342 MS.gene054600:intron 35.0%
! GCACTAGGAATTGTATTGAT+TGG + chr4.1:88247824-88247843 MS.gene054600:intron 35.0%
! TATGTATGTACCCTTTTGTC+AGG + chr4.1:88248387-88248406 MS.gene054600:intron 35.0%
! TGTTTAGCTCGCATAAAGAA+AGG - chr4.1:88249446-88249465 None:intergenic 35.0%
! TTTGTCAGGTTGTTATCTTC+TGG + chr4.1:88248401-88248420 MS.gene054600:intron 35.0%
!! CCAGAAGAAGCATTCAAAAA+AGG - chr4.1:88247156-88247175 None:intergenic 35.0%
!! GGTAAACTAGCTTTGATCAT+TGG + chr4.1:88247217-88247236 MS.gene054600:intron 35.0%
!!! CCTTTTTTGAATGCTTCTTC+TGG + chr4.1:88247153-88247172 MS.gene054600:CDS 35.0%
AACTACTATTATCCCTCGAG+CGG + chr4.1:88248424-88248443 MS.gene054600:CDS 40.0%
AAGTCATATACCACTGAGTG+GGG - chr4.1:88247905-88247924 None:intergenic 40.0%
ACAAGTCATATACCACTGAG+TGG - chr4.1:88247907-88247926 None:intergenic 40.0%
ACCGAGTATCTCTTCAGTTT+AGG + chr4.1:88249048-88249067 MS.gene054600:intron 40.0%
AGTCTGTTTCAGAGAGCTAA+TGG - chr4.1:88249374-88249393 None:intergenic 40.0%
CAAGTCATATACCACTGAGT+GGG - chr4.1:88247906-88247925 None:intergenic 40.0%
CGCATAAAGAAAGGCCTATT+TGG - chr4.1:88249437-88249456 None:intergenic 40.0%
CTCATATGTACCGAAGATAC+TGG + chr4.1:88247852-88247871 MS.gene054600:intron 40.0%
CTTAGGCCTCAATGTTGTTA+AGG + chr4.1:88248839-88248858 MS.gene054600:CDS 40.0%
GCCTAAACTGAAGAGATACT+CGG - chr4.1:88249052-88249071 None:intergenic 40.0%
GGCATAGTTACCAGTATCTT+CGG - chr4.1:88247865-88247884 None:intergenic 40.0%
GTGCAAAATTGATACGCACT+AGG + chr4.1:88247809-88247828 MS.gene054600:intron 40.0%
TAGAGATGAACTATGGGTCT+TGG - chr4.1:88248524-88248543 None:intergenic 40.0%
TAGTAATTCCTTGGGTATGC+TGG + chr4.1:88249628-88249647 MS.gene054600:intron 40.0%
TATGCAATGCAAGCAAAGGA+AGG - chr4.1:88248018-88248037 None:intergenic 40.0%
TGGAGATAACTTTCGGTGAT+CGG + chr4.1:88248694-88248713 MS.gene054600:CDS 40.0%
! ACTGTGGTGGAGATAACTTT+CGG + chr4.1:88248687-88248706 MS.gene054600:CDS 40.0%
! CTACTCTAAAAAGCCCTGTT+TGG + chr4.1:88249176-88249195 MS.gene054600:intron 40.0%
! CTTTTATGTGGATATCAGGG+TGG + chr4.1:88248594-88248613 MS.gene054600:intron 40.0%
!! ACTCTGGATCTTCCACTTTT+CGG - chr4.1:88249678-88249697 None:intergenic 40.0%
!! TGAAACTTGTTGCGCAACTT+AGG + chr4.1:88249549-88249568 MS.gene054600:intron 40.0%
!!! ACAGGGCTTTTTAGAGTAGA+TGG - chr4.1:88249175-88249194 None:intergenic 40.0%
ACACCAAATTCATGTCCTGC+AGG - chr4.1:88248204-88248223 None:intergenic 45.0%
AGCACAAGGAATGACTAGTG+CGG - chr4.1:88249136-88249155 None:intergenic 45.0%
AGTACCTGCACATCAGTAAC+AGG - chr4.1:88248455-88248474 None:intergenic 45.0%
ATAACTTTCGGTGATCGGCT+TGG + chr4.1:88248699-88248718 MS.gene054600:CDS 45.0%
CGAATTGCCTCTAACAACTC+TGG - chr4.1:88249694-88249713 None:intergenic 45.0%
GGAAGATCCAGAGTTGTTAG+AGG + chr4.1:88249684-88249703 MS.gene054600:CDS 45.0%
GGATATCAGGGTGGAAATCA+AGG + chr4.1:88248603-88248622 MS.gene054600:intron 45.0%
TAATTCCTTGGGTATGCTGG+TGG + chr4.1:88249631-88249650 MS.gene054600:intron 45.0%
TATGACTATTGGGGTCGGAA+CGG - chr4.1:88248640-88248659 None:intergenic 45.0%
TCTTCAGTTTAGGCCAGCAT+TGG + chr4.1:88249058-88249077 MS.gene054600:intron 45.0%
TTGCATCTGGATCCAAGTCT+TGG - chr4.1:88248668-88248687 None:intergenic 45.0%
TTTCAGTTGGGTTCCAATGC+TGG - chr4.1:88249074-88249093 None:intergenic 45.0%
! CAATTAGGAGCAAGAGCACA+AGG - chr4.1:88249150-88249169 None:intergenic 45.0%
! CTCAAAGCACTCATAGCCAT+CGG - chr4.1:88247063-88247082 None:intergenic 45.0%
! GGAGCTTTTTGCAGTGATAC+TGG + chr4.1:88249652-88249671 MS.gene054600:intron 45.0%
! TGTCGACCGTGTTTGTTGAT+CGG + chr4.1:88248551-88248570 MS.gene054600:intron 45.0%
! TTTTCATGAAGAACGCCTGC+AGG + chr4.1:88248186-88248205 MS.gene054600:intron 45.0%
!! GCTATGAGTGCTTTGAGACT+TGG + chr4.1:88247066-88247085 MS.gene054600:CDS 45.0%
!! GCTATTTTCATGAGCCATCG+TGG + chr4.1:88249319-88249338 MS.gene054600:intron 45.0%
ACGCCTGCAGGACATGAATT+TGG + chr4.1:88248198-88248217 MS.gene054600:intron 50.0%
ACTAAAGCTCCTGCATACGC+AGG - chr4.1:88248105-88248124 None:intergenic 50.0%
ACTGAGTGGGGTTCACTACA+CGG - chr4.1:88247893-88247912 None:intergenic 50.0%
AGCACCTGTTACTGATGTGC+AGG + chr4.1:88248448-88248467 MS.gene054600:CDS 50.0%
ATCTCCACCACAGTTGCATC+TGG - chr4.1:88248681-88248700 None:intergenic 50.0%
CAGTGATACTGGCCGAAAAG+TGG + chr4.1:88249663-88249682 MS.gene054600:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG - chr4.1:88248104-88248123 None:intergenic 50.0%
CTTGGATCCAGATGCAACTG+TGG + chr4.1:88248671-88248690 MS.gene054600:CDS 50.0%
GCACAAGGAATGACTAGTGC+GGG - chr4.1:88249135-88249154 None:intergenic 50.0%
TTGGCATTGTTACCCCTTCC+CGG + chr4.1:88248077-88248096 MS.gene054600:intron 50.0%
! ATGCAGGAGCTTTAGTGCAC+CGG + chr4.1:88248109-88248128 MS.gene054600:intron 50.0%
AAGCTCCACCAGCATACCCA+AGG - chr4.1:88249639-88249658 None:intergenic 55.0%
GGATCCAGATGCAACTGTGG+TGG + chr4.1:88248674-88248693 MS.gene054600:CDS 55.0%
GGGGTTCACTACACGGATCA+GGG - chr4.1:88247886-88247905 None:intergenic 55.0%
GTGTAGTGAACCCCACTCAG+TGG + chr4.1:88247892-88247911 MS.gene054600:intron 55.0%
TGGGGTTCACTACACGGATC+AGG - chr4.1:88247887-88247906 None:intergenic 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG + chr4.1:88248110-88248129 MS.gene054600:intron 55.0%
GAATGACTAGTGCGGGCCAG+TGG - chr4.1:88249128-88249147 None:intergenic 60.0%
! TAACAGGTGCTGCCGCTCGA+GGG - chr4.1:88248439-88248458 None:intergenic 60.0%
CATACGCAGGGTCCGGGAAG+GGG - chr4.1:88248092-88248111 None:intergenic 65.0%
CTCCTGCATACGCAGGGTCC+GGG - chr4.1:88248098-88248117 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr4.1:88248093-88248112 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+CGG - chr4.1:88248099-88248118 None:intergenic 65.0%
TGACTAGTGCGGGCCAGTGG+TGG - chr4.1:88249125-88249144 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG - chr4.1:88248094-88248113 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+AGG + chr4.1:88248093-88248112 MS.gene054600:intron 65.0%
! GTAACAGGTGCTGCCGCTCG+AGG - chr4.1:88248440-88248459 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 88247063 88249750 88247063 ID=MS.gene054600
chr4.1 mRNA 88247063 88249750 88247063 ID=MS.gene054600.t1;Parent=MS.gene054600
chr4.1 exon 88247063 88247217 88247063 ID=MS.gene054600.t1.exon1;Parent=MS.gene054600.t1
chr4.1 CDS 88247063 88247217 88247063 ID=cds.MS.gene054600.t1;Parent=MS.gene054600.t1
chr4.1 exon 88248409 88248469 88248409 ID=MS.gene054600.t1.exon2;Parent=MS.gene054600.t1
chr4.1 CDS 88248409 88248469 88248409 ID=cds.MS.gene054600.t1;Parent=MS.gene054600.t1
chr4.1 exon 88248612 88248737 88248612 ID=MS.gene054600.t1.exon3;Parent=MS.gene054600.t1
chr4.1 CDS 88248612 88248737 88248612 ID=cds.MS.gene054600.t1;Parent=MS.gene054600.t1
chr4.1 exon 88248822 88248916 88248822 ID=MS.gene054600.t1.exon4;Parent=MS.gene054600.t1
chr4.1 CDS 88248822 88248916 88248822 ID=cds.MS.gene054600.t1;Parent=MS.gene054600.t1
chr4.1 exon 88249666 88249750 88249666 ID=MS.gene054600.t1.exon5;Parent=MS.gene054600.t1
chr4.1 CDS 88249666 88249750 88249666 ID=cds.MS.gene054600.t1;Parent=MS.gene054600.t1
Gene Sequence

>MS.gene054600

ATGGCTATGAGTGCTTTGAGACTTGGATTTCACTTCAGTGCTGCTACTGATAATAGTTTGAGAGTTTTGGAAAAACCCATTTTCTGTGTCCCTTTTTTGAATGCTTCTTCTGGCTTTGTTTCTACTAAGCCATGTTACTTTCTTCACAAAAGAAGGTAAACTAGCTTTGATCATTGGTTACTTATGGATAAGATGATTTCATTGATATGTTGATCTCATAGAATTGTTGATTGATTGTGCTTGTTGCTAATGAATCATTAGAATTTGAGCTTTTAGTAGGTGGTTAATGGTATTATTGTTTGTGTTATTATGCTTTTAATTTAGTTGTTTTAGTGATTCACTTTTAGATTTTAATTAATTGAATCCATTCATAGATATGATTTATGACCGAGTATTATGACGACGTTTGATCGATGATTGTCAAATCGAGATTCATATCGTGAATACGAAGACCTATTTTTGTGAATTGTGAATCGAAGTTTATTATGAATCGTAATATATATTAGATGTAAAAATATGACATTTTTAAGTAAAATCAAGTGCCATAAAAAAATTATAAGCCGATATATCGAAAATACACCTCGAAGTAATTCAAGATTTAAGTCATAAATCAACTGAGAAAAGAAAAATGATTGACTGTACAAAGTTGACAAAAACAAGTGGATGTATAGACTAACCTTAGGTAATGGTTCCTTACAATGAATCAGTATACATCATAGTGAATCAGGATTTAAGATAAGATTCATGTGCAAAATTGATACGCACTAGGAATTGTATTGATTGGATTGACTCATATGTACCGAAGATACTGGTAACTATGCCCTGATCCGTGTAGTGAACCCCACTCAGTGGTATATGACTTGTTTGTTGTTGATTGAATCCAATTATACCCACTTTTGAATATATATTTGTTTATAAAATTGTAGTGGAACTCATTGACTTATATTTGGTTCCTTCCTTTGCTTGCATTGCATATGTTAATTCTGGCTAGTAATTTATTCTGTTTATTTAGATTTGGCATTGTTACCCCTTCCCGGACCCTGCGTATGCAGGAGCTTTAGTGCACCGGGCTGCCCTTTTTTTTTAATTCAGATTTGATATTGTTAGCATATACCTTGTCTTATTTTCATGAAGAACGCCTGCAGGACATGAATTTGGTGTGACTAATTAAGTTAGTAGATTAGGTTGGATAAGTACGGAAAATATTTACTGCTCTTTCTTTTGTATGGAAGAATAGTAAACATTTGAAACTTGGGTATTGAATGTTACTTTCAGCTACTGCACCAAAGTAATATGCCCATTTCTGTGTGTTAATTGTATGTACTATGTATGTACCCTTTTGTCAGGTTGTTATCTTCTGGAACTACTATTATCCCTCGAGCGGCAGCACCTGTTACTGATGTGCAGGTACTCAGTGTGATCGACCTATGTGATTGTCGTTATTTGCGTGTGAAACAGCCAAGACCCATAGTTCATCTCTATAATGCTTGTCGACCGTGTTTGTTGATCGGTAAAAAACTTATTTTTGTTTCTTTTATGTGGATATCAGGGTGGAAATCAAGGTGAGACTGATACCGTTCCGACCCCAATAGTCATAATTGACCAAGACTTGGATCCAGATGCAACTGTGGTGGAGATAACTTTCGGTGATCGGCTTGGAGCTCTTCTTGACACAGTATGTCATTCTTTGAGTAAATCTATGCTTGTGCTTGCTTATCTGTAGCTTTTTCTTAGAGGGTAATATTTTCATTTGTTGTAGATGAGTGCATTAAAAGACTTAGGCCTCAATGTTGTTAAGGCAAATGTTTTTCTGGATTCTTCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCGTAAGTATTACTTGATTTGTGCACTTTGCGTATAATAGTTACAAGTATGTGTAGCTGTTCGATCTTGTTATTAATTTTGTATTATAACTGATCTATGCTAAATGACTGTTAATAATGATTATGTTGCTCAAACCGAGTATCTCTTCAGTTTAGGCCAGCATTGGAACCCAACTGAAACTCTCAGATATTCTTTATTTTATTTACTCCACCACTGGCCCGCACTAGTCATTCCTTGTGCTCTTGCTCCTAATTGCACCATCTACTCTAAAAAGCCCTGTTTGGATAAACAACTTAATTAAGCGCTTATCATATAAGTGCTTATGTTTAAGCTATTTCTATAATAAAAGGTAAAATAAAGTCTAACAGTTCTACCAAAAAAAAAGTCACATTGTTTTCATATAAGCTATTTTCATGAGCCATCGTGGAGAACTTATAGATATATCATAAGTTGTTTCCATTAGCTCTCTGAAACAGACTACAAGTGTTTTTGCTAATAGACAAACTCAAATAAGTCAATCCAAATAGGCCTTTCTTTATGCGAGCTAAACACATGTTAGCACATGCACAAGTATACGTAGTCAGACTTCAGAACTGTCCTACCTAAACAGTATTAGAAATTCAATCTAGAACATTGAAACTTGTTGCGCAACTTAGGTTTGATTTCTCCTTTTAAGCAACAAATATCTTGGATGAGGTTTTAACTCGCTTCTTTAGTAATTCCTTGGGTATGCTGGTGGAGCTTTTTGCAGTGATACTGGCCGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTGATTCAGTATCACCCG

Protein sequence

>MS.gene054600.t1

MAMSALRLGFHFSAATDNSLRVLEKPIFCVPFLNASSGFVSTKPCYFLHKRRLLSSGTTIIPRAAAPVTDVQGGNQGETDTVPTPIVIIDQDLDPDATVVEITFGDRLGALLDTMSALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHP