Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51611.t1 | XP_003588878.1 | 96.7 | 449 | 11 | 2 | 1 | 445 | 56 | 504 | 6.40E-237 | 829.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51611.t1 | Q5FV41 | 65.8 | 447 | 147 | 4 | 2 | 443 | 52 | 497 | 3.6e-164 | 579.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51611.t1 | G7I897 | 96.7 | 449 | 11 | 2 | 1 | 445 | 56 | 504 | 4.6e-237 | 829.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050654 | MS.gene51611 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene051490 | MS.gene51611 | 0.800177 | 1.63E-48 | -1.69E-46 |
| MS.gene051541 | MS.gene51611 | 0.828916 | 6.89E-55 | -1.69E-46 |
| MS.gene052016 | MS.gene51611 | 0.802707 | 4.94E-49 | -1.69E-46 |
| MS.gene052493 | MS.gene51611 | 0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene51611 | 0.821338 | 4.26E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene51611 | 0.821318 | 4.30E-53 | -1.69E-46 |
| MS.gene055327 | MS.gene51611 | 0.805985 | 1.02E-49 | -1.69E-46 |
| MS.gene05552 | MS.gene51611 | 0.809325 | 2.00E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene51611 | 0.836704 | 8.01E-57 | -1.69E-46 |
| MS.gene058429 | MS.gene51611 | 0.83966 | 1.39E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene51611 | 0.83068 | 2.56E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene51611 | 0.81435 | 1.61E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene51611 | 0.834935 | 2.25E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 90 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTTGTGTTGGCAATTT+TGG | 0.063315 | 1.1:+7687012 | MS.gene51611:CDS |
| CTTGGATTGTTAAGCCTTTA+TGG | 0.130713 | 1.1:+7685382 | MS.gene51611:CDS |
| GGTATAATATTGCTCCTAAA+AGG | 0.175539 | 1.1:-7689201 | None:intergenic |
| TCCAGCTGGACTTATAATTT+TGG | 0.227795 | 1.1:+7687356 | MS.gene51611:CDS |
| TCTTCTATTGGTGCACTATT+AGG | 0.233671 | 1.1:+7687157 | MS.gene51611:CDS |
| TTTGGAGTAGTTGTTGTTTA+TGG | 0.240305 | 1.1:+7685243 | None:intergenic |
| TTGATGGTTGCAGGTTTATT+AGG | 0.248071 | 1.1:+7686950 | MS.gene51611:intron |
| TTGGATTGTTAAGCCTTTAT+GGG | 0.253679 | 1.1:+7685383 | MS.gene51611:CDS |
| GAACAAAGTTTGATAATCTT+TGG | 0.261678 | 1.1:+7689551 | MS.gene51611:CDS |
| GGCATCTTTGTTCACCTTAT+AGG | 0.269657 | 1.1:+7687193 | MS.gene51611:CDS |
| CAGTTGCTCTATGGTCTATC+AGG | 0.276942 | 1.1:+7689271 | MS.gene51611:CDS |
| GGTTTAGGTGGTGCTCTTGC+TGG | 0.292167 | 1.1:+7685276 | MS.gene51611:CDS |
| GGAAGAAGAATGAAAGAGTT+AGG | 0.300985 | 1.1:-7689646 | None:intergenic |
| TGTGCCTTTAGTTCTTCTAT+TGG | 0.305955 | 1.1:+7687145 | MS.gene51611:CDS |
| TGCCGGCATCCACAAAGTTT+TGG | 0.309039 | 1.1:-7687689 | None:intergenic |
| GGCTAACCATAGGGCCTATA+AGG | 0.323121 | 1.1:-7687207 | None:intergenic |
| AAGATTATCAAACTTTGTTC+TGG | 0.328960 | 1.1:-7689548 | None:intergenic |
| CATTCAGAGACTTACTCTTT+TGG | 0.332958 | 1.1:+7689245 | MS.gene51611:CDS |
| AATCCGGTATACCAAACTTT+AGG | 0.344820 | 1.1:-7689327 | None:intergenic |
| AGCTCAAAGCTTTGTCCATC+TGG | 0.346803 | 1.1:+7689424 | MS.gene51611:CDS |
| CTGGACTTCTTTCATCATCA+TGG | 0.374263 | 1.1:+7689491 | MS.gene51611:CDS |
| TATGGAATAAGTCAAGGTTT+AGG | 0.377756 | 1.1:+7685261 | MS.gene51611:CDS |
| GCCTTAACAGCAGGGAGTGC+TGG | 0.387976 | 1.1:+7687034 | MS.gene51611:CDS |
| TGTAGTCCACATAGCCTTGC+CGG | 0.387979 | 1.1:-7687706 | None:intergenic |
| CTTTGTCCATCTGGTATTGA+AGG | 0.389296 | 1.1:+7689433 | MS.gene51611:CDS |
| AGAAACCAAGGATGTTGAAT+TGG | 0.391325 | 1.1:+7689711 | MS.gene51611:CDS |
| GGTGGTGCTCTTGCTGGTGT+TGG | 0.393991 | 1.1:+7685282 | MS.gene51611:CDS |
| CTGGAATTACATCTATTCCT+TGG | 0.397255 | 1.1:+7685364 | MS.gene51611:CDS |
| ATGAGATTGAACCTAAAGTT+TGG | 0.398436 | 1.1:+7689316 | MS.gene51611:CDS |
| TCCAGCACTCCCTGCTGTTA+AGG | 0.406873 | 1.1:-7687035 | None:intergenic |
| ACCAATAAAACATTCCTTCA+AGG | 0.408629 | 1.1:-7687797 | None:intergenic |
| TGGACTTCTTTCATCATCAT+GGG | 0.415817 | 1.1:+7689492 | MS.gene51611:CDS |
| CTATTAGGATTCTCTATTAG+TGG | 0.425299 | 1.1:+7687172 | MS.gene51611:CDS |
| CTAGGTGCACCAAAACTTTG+TGG | 0.428219 | 1.1:+7687680 | MS.gene51611:intron |
| CGTAATCCTTTAGAGCGTAT+TGG | 0.433360 | 1.1:-7689222 | None:intergenic |
| CTGAGTTTGAATATCCTTGA+AGG | 0.437719 | 1.1:+7687783 | MS.gene51611:CDS |
| TCAAATACCTGTGAGAAAGA+TGG | 0.438222 | 1.1:-7687840 | None:intergenic |
| TGTTCACCTTATAGGCCCTA+TGG | 0.452835 | 1.1:+7687201 | MS.gene51611:CDS |
| CTTTCATCATCATGGGGTGG+TGG | 0.454756 | 1.1:+7689499 | MS.gene51611:CDS |
| AGACACCAATTCAACATCCT+TGG | 0.456982 | 1.1:-7689716 | None:intergenic |
| ATCACAACAAAGACGTAATC+CGG | 0.462520 | 1.1:-7689343 | None:intergenic |
| CACCAAAACTTTGTGGATGC+CGG | 0.471200 | 1.1:+7687687 | MS.gene51611:CDS |
| GTATAATATTGCTCCTAAAA+GGG | 0.472990 | 1.1:-7689200 | None:intergenic |
| ACCAAAATTATAAGTCCAGC+TGG | 0.476055 | 1.1:-7687357 | None:intergenic |
| GAACCTAAAGTTTGGTATAC+CGG | 0.482350 | 1.1:+7689324 | MS.gene51611:CDS |
| ATTATACCAATACGCTCTAA+AGG | 0.485902 | 1.1:+7689216 | MS.gene51611:CDS |
| CAAATACCTGTGAGAAAGAT+GGG | 0.493656 | 1.1:-7687839 | None:intergenic |
| CATTGAAGAATCAAGATGTA+TGG | 0.496871 | 1.1:+7687727 | MS.gene51611:CDS |
| AGTTCAACCTTCTGAAGCAC+AGG | 0.498974 | 1.1:+7685335 | MS.gene51611:CDS |
| TCTCTTGTACACAGTGTTGA+TGG | 0.499772 | 1.1:+7689736 | MS.gene51611:CDS |
| CTGTGCAACACATGCATCAA+TGG | 0.501476 | 1.1:-7687077 | None:intergenic |
| TCTTCTTCCAAAAGAAAATG+TGG | 0.503749 | 1.1:+7689660 | MS.gene51611:CDS |
| TCTGAAGCACAGGTTTATGC+TGG | 0.507686 | 1.1:+7685345 | MS.gene51611:CDS |
| TGTCAGAAGCAAGGGAAGGA+TGG | 0.513050 | 1.1:-7687111 | None:intergenic |
| TCAGTAAGAAGACCCCATAA+AGG | 0.514757 | 1.1:-7685396 | None:intergenic |
| AAAAGAAAATGTGGATTCAA+AGG | 0.516295 | 1.1:+7689669 | MS.gene51611:CDS |
| GTCAGAAGCAAGGGAAGGAT+GGG | 0.531751 | 1.1:-7687110 | None:intergenic |
| GGTTTGATGACTATTCCAGC+TGG | 0.533339 | 1.1:+7687342 | MS.gene51611:CDS |
| AAATTGCCAACACAAGATGA+AGG | 0.535053 | 1.1:-7687009 | None:intergenic |
| GTTGTTTATGGAATAAGTCA+AGG | 0.536630 | 1.1:+7685255 | MS.gene51611:CDS |
| TGCACCAATAGAAGAACTAA+AGG | 0.537673 | 1.1:-7687149 | None:intergenic |
| AACTTTGCATGTCAGAAGCA+AGG | 0.539901 | 1.1:-7687120 | None:intergenic |
| CATAAAGGCTTAACAATCCA+AGG | 0.539921 | 1.1:-7685381 | None:intergenic |
| AAATGACTAGTAGACTAAAG+TGG | 0.544535 | 1.1:+7689383 | MS.gene51611:CDS |
| TGAAAACCTTCATCTTGTGT+TGG | 0.550037 | 1.1:+7687003 | MS.gene51611:CDS |
| CTAATGTCAATTGATAATGC+TGG | 0.554898 | 1.1:+7689472 | MS.gene51611:CDS |
| CTTCTTTCATCATCATGGGG+TGG | 0.567293 | 1.1:+7689496 | MS.gene51611:CDS |
| TGGATTGTTAAGCCTTTATG+GGG | 0.567662 | 1.1:+7685384 | MS.gene51611:CDS |
| GGACTTCTTTCATCATCATG+GGG | 0.573124 | 1.1:+7689493 | MS.gene51611:CDS |
| ACAAAACTTCTCTTACAGAC+AGG | 0.574633 | 1.1:+7687407 | MS.gene51611:CDS |
| ACTTTGCATGTCAGAAGCAA+GGG | 0.576270 | 1.1:-7687119 | None:intergenic |
| AAACTTTGTGGATGCCGGCA+AGG | 0.577788 | 1.1:+7687692 | MS.gene51611:CDS |
| GATATTCAAACTCAGTGCAA+AGG | 0.582025 | 1.1:-7687775 | None:intergenic |
| GCATAAACCTGTGCTTCAGA+AGG | 0.585483 | 1.1:-7685342 | None:intergenic |
| TTATTGGTATACAGACTCAA+AGG | 0.588010 | 1.1:+7687812 | MS.gene51611:CDS |
| GGAATAAGTCAAGGTTTAGG+TGG | 0.592318 | 1.1:+7685264 | MS.gene51611:CDS |
| ATGGAAAGATAACAAAAGCA+TGG | 0.598685 | 1.1:-7686981 | None:intergenic |
| AACAGCAGGGAGTGCTGGAG+TGG | 0.601674 | 1.1:+7687039 | MS.gene51611:CDS |
| GGATGGCCCATCTTTCTCAC+AGG | 0.602106 | 1.1:+7687833 | MS.gene51611:CDS |
| AATGTTCCTTCAATACCAGA+TGG | 0.602463 | 1.1:-7689439 | None:intergenic |
| AAAGAGTTAGGATCAACTCT+AGG | 0.610731 | 1.1:-7689634 | None:intergenic |
| TGGTATACAGACTCAAAGGA+TGG | 0.620432 | 1.1:+7687816 | MS.gene51611:CDS |
| AGAAAATGTGGATTCAAAGG+TGG | 0.627950 | 1.1:+7689672 | MS.gene51611:CDS |
| TTTGAGCTGAGTACAAGCAT+AGG | 0.628993 | 1.1:-7689409 | None:intergenic |
| AGTTGCTCTATGGTCTATCA+GGG | 0.638082 | 1.1:+7689272 | MS.gene51611:CDS |
| TATTGACACTTCAGAAACCA+AGG | 0.638956 | 1.1:+7689699 | MS.gene51611:CDS |
| TGGATGCCGGCAAGGCTATG+TGG | 0.641291 | 1.1:+7687700 | MS.gene51611:CDS |
| TGAAGAATCAAGATGTATGG+AGG | 0.648173 | 1.1:+7687730 | MS.gene51611:CDS |
| TGCATGTCAGAAGCAAGGGA+AGG | 0.650191 | 1.1:-7687115 | None:intergenic |
| GATAAGTACATGTATAGACA+AGG | 0.690907 | 1.1:-7687753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAGTTTACAATTTATAA+AGG | - | chr1.1:7685608-7685627 | None:intergenic | 15.0% |
| !! | AGAAGTTTACAATTTATAAA+GGG | - | chr1.1:7685607-7685626 | None:intergenic | 15.0% |
| !! | TAGCAATAGTTTATATAATT+TGG | + | chr1.1:7689027-7689046 | MS.gene51611:intron | 15.0% |
| !! | TTTGTGTTTATCAAATTAAA+AGG | + | chr1.1:7685626-7685645 | MS.gene51611:intron | 15.0% |
| !!! | GTATGATATTTTTTACTTTT+TGG | + | chr1.1:7688577-7688596 | MS.gene51611:intron | 15.0% |
| !!! | TTTTAAAAAATTACTAAGCA+TGG | - | chr1.1:7689002-7689021 | None:intergenic | 15.0% |
| !! | ATATTTATAGATAAGTTCAC+TGG | + | chr1.1:7688495-7688514 | MS.gene51611:intron | 20.0% |
| !! | ATTAGGGAAGTTAAAAATTA+AGG | + | chr1.1:7688628-7688647 | MS.gene51611:intron | 20.0% |
| !! | ATTATATGTGTTTCTTATAG+TGG | + | chr1.1:7686819-7686838 | MS.gene51611:intron | 20.0% |
| !! | TATAGCATCATATATATTTG+TGG | + | chr1.1:7688733-7688752 | MS.gene51611:intron | 20.0% |
| !!! | AAAGTTTTTTCATTCAACTA+GGG | - | chr1.1:7689053-7689072 | None:intergenic | 20.0% |
| !!! | TAAAGTTTTTTCATTCAACT+AGG | - | chr1.1:7689054-7689073 | None:intergenic | 20.0% |
| !!! | TGATAGATTTTTTTCTCATA+GGG | + | chr1.1:7687312-7687331 | MS.gene51611:intron | 20.0% |
| ! | AAAAGAAAATGTGGATTCAA+AGG | + | chr1.1:7689669-7689688 | MS.gene51611:CDS | 25.0% |
| ! | AAAAGTAATAGTTATGAGCA+GGG | - | chr1.1:7686429-7686448 | None:intergenic | 25.0% |
| ! | AAGATTATCAAACTTTGTTC+TGG | - | chr1.1:7689551-7689570 | None:intergenic | 25.0% |
| ! | AGGAACTCAAAAATTGTATT+GGG | - | chr1.1:7685940-7685959 | None:intergenic | 25.0% |
| ! | ATAAGCACGTAATACTTATA+TGG | - | chr1.1:7687611-7687630 | None:intergenic | 25.0% |
| ! | ATACCAGCAAAAATGAAATA+AGG | - | chr1.1:7685453-7685472 | None:intergenic | 25.0% |
| ! | ATATAAGTATTACGTGCTTA+TGG | + | chr1.1:7687610-7687629 | MS.gene51611:intron | 25.0% |
| ! | CAAATTAAAAGGAACTTCAA+TGG | + | chr1.1:7685637-7685656 | MS.gene51611:intron | 25.0% |
| ! | CTTAACACAATAGTAATTGA+TGG | + | chr1.1:7686214-7686233 | MS.gene51611:intron | 25.0% |
| ! | GAATTTCATGAAGTTTAGAT+TGG | - | chr1.1:7687978-7687997 | None:intergenic | 25.0% |
| ! | GAGAATGAAAAAATCAGATT+AGG | - | chr1.1:7687661-7687680 | None:intergenic | 25.0% |
| ! | GTAAACAAATTAGCATCTAA+GGG | + | chr1.1:7686475-7686494 | MS.gene51611:intron | 25.0% |
| ! | GTACTTAGAAGAAAACATTA+GGG | + | chr1.1:7688612-7688631 | MS.gene51611:intron | 25.0% |
| ! | GTATAATATTGCTCCTAAAA+GGG | - | chr1.1:7689203-7689222 | None:intergenic | 25.0% |
| ! | GTTAAAAATTAAGGAATCCA+AGG | + | chr1.1:7688637-7688656 | MS.gene51611:intron | 25.0% |
| ! | GTTGGAAATATACAGAAAAA+TGG | + | chr1.1:7685761-7685780 | MS.gene51611:intron | 25.0% |
| ! | TAAACAAATTAGCATCTAAG+GGG | + | chr1.1:7686476-7686495 | MS.gene51611:intron | 25.0% |
| ! | TCTGATTACTCTTCTAATTT+AGG | + | chr1.1:7688249-7688268 | MS.gene51611:intron | 25.0% |
| ! | TGTACTTAGAAGAAAACATT+AGG | + | chr1.1:7688611-7688630 | MS.gene51611:intron | 25.0% |
| ! | TTATTTAGTACACTTGTTCT+AGG | + | chr1.1:7686581-7686600 | MS.gene51611:intron | 25.0% |
| ! | TTTATCTGAATGCTGAAAAT+GGG | + | chr1.1:7686509-7686528 | MS.gene51611:intron | 25.0% |
| !! | AAATGAAATAAGGTTTTCTC+CGG | - | chr1.1:7685443-7685462 | None:intergenic | 25.0% |
| !! | AAATGTTGATGGAATAACAA+GGG | + | chr1.1:7688401-7688420 | MS.gene51611:intron | 25.0% |
| !! | AATCTTTTCACCAAAAGTTA+CGG | + | chr1.1:7688548-7688567 | MS.gene51611:intron | 25.0% |
| !! | ATCAGATTAGGTGTTATATT+AGG | - | chr1.1:7687649-7687668 | None:intergenic | 25.0% |
| !! | GAACAAAGTTTGATAATCTT+TGG | + | chr1.1:7689551-7689570 | MS.gene51611:CDS | 25.0% |
| !! | TAACATCTTATTTATCCTTG+AGG | - | chr1.1:7688800-7688819 | None:intergenic | 25.0% |
| !! | TAGGTTTCATATTTTCAATC+AGG | + | chr1.1:7689166-7689185 | MS.gene51611:intron | 25.0% |
| !! | TCAGATTAGGTGTTATATTA+GGG | - | chr1.1:7687648-7687667 | None:intergenic | 25.0% |
| !! | TGAAAAACTTTGCAAGTTTT+AGG | - | chr1.1:7687252-7687271 | None:intergenic | 25.0% |
| !! | TGATCTTTGTTTAAATGTGT+TGG | + | chr1.1:7685488-7685507 | MS.gene51611:intron | 25.0% |
| !! | TTAGTCAAAAGGTTTAAAAC+CGG | + | chr1.1:7686281-7686300 | MS.gene51611:intron | 25.0% |
| !! | TTTGAATCCACATTTTCTTT+TGG | - | chr1.1:7689670-7689689 | None:intergenic | 25.0% |
| !!! | AAACCTTATTTCATTTTTGC+TGG | + | chr1.1:7685447-7685466 | MS.gene51611:CDS | 25.0% |
| !!! | ATAGATTTTTTTCTCATAGG+GGG | + | chr1.1:7687314-7687333 | MS.gene51611:intron | 25.0% |
| !!! | ATCTGATTTTTTCATTCTCT+AGG | + | chr1.1:7687662-7687681 | MS.gene51611:intron | 25.0% |
| !!! | CTGATAGATTTTTTTCTCAT+AGG | + | chr1.1:7687311-7687330 | MS.gene51611:intron | 25.0% |
| !!! | GATAGATTTTTTTCTCATAG+GGG | + | chr1.1:7687313-7687332 | MS.gene51611:intron | 25.0% |
| !!! | TAAGAGAAGTTTTGTATATG+AGG | - | chr1.1:7687402-7687421 | None:intergenic | 25.0% |
| !!! | TGGTTTTATAATGTTGAGTT+AGG | - | chr1.1:7688282-7688301 | None:intergenic | 25.0% |
| AAAACCAACTTGTAAAGTGA+GGG | + | chr1.1:7688295-7688314 | MS.gene51611:intron | 30.0% | |
| AAACAAATTAGCATCTAAGG+GGG | + | chr1.1:7686477-7686496 | MS.gene51611:intron | 30.0% | |
| AAATGACTAGTAGACTAAAG+TGG | + | chr1.1:7689383-7689402 | MS.gene51611:CDS | 30.0% | |
| AATAAAAAATCCCCCTCATT+TGG | - | chr1.1:7685963-7685982 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr1.1:7688938-7688957 | None:intergenic | 30.0% | |
| ACCAATAAAACATTCCTTCA+AGG | - | chr1.1:7687800-7687819 | None:intergenic | 30.0% | |
| AGACTACTATATTAGTGAAG+CGG | - | chr1.1:7686914-7686933 | None:intergenic | 30.0% | |
| ATCTCTTCTTCAATTCTTGT+AGG | - | chr1.1:7686884-7686903 | None:intergenic | 30.0% | |
| ATGAGATTGAACCTAAAGTT+TGG | + | chr1.1:7689316-7689335 | MS.gene51611:CDS | 30.0% | |
| ATGGAAAGATAACAAAAGCA+TGG | - | chr1.1:7686984-7687003 | None:intergenic | 30.0% | |
| ATTATACCAATACGCTCTAA+AGG | + | chr1.1:7689216-7689235 | MS.gene51611:CDS | 30.0% | |
| CAAAAGTAATAGTTATGAGC+AGG | - | chr1.1:7686430-7686449 | None:intergenic | 30.0% | |
| CAAACAAAGCCTTAAAATTC+GGG | + | chr1.1:7686092-7686111 | MS.gene51611:intron | 30.0% | |
| CATTGAAGAATCAAGATGTA+TGG | + | chr1.1:7687727-7687746 | MS.gene51611:CDS | 30.0% | |
| CCAAACAAAGCCTTAAAATT+CGG | + | chr1.1:7686091-7686110 | MS.gene51611:intron | 30.0% | |
| CTATTAGGATTCTCTATTAG+TGG | + | chr1.1:7687172-7687191 | MS.gene51611:CDS | 30.0% | |
| GAACTCAAAAATTGTATTGG+GGG | - | chr1.1:7685938-7685957 | None:intergenic | 30.0% | |
| GAGGAACTCAAAAATTGTAT+TGG | - | chr1.1:7685941-7685960 | None:intergenic | 30.0% | |
| GATAAGTACATGTATAGACA+AGG | - | chr1.1:7687756-7687775 | None:intergenic | 30.0% | |
| GATGTTAAATCCTTGTGATT+AGG | + | chr1.1:7688813-7688832 | MS.gene51611:intron | 30.0% | |
| GGAACTCAAAAATTGTATTG+GGG | - | chr1.1:7685939-7685958 | None:intergenic | 30.0% | |
| GGAAGAAAAGAAAAATCAAG+AGG | - | chr1.1:7687231-7687250 | None:intergenic | 30.0% | |
| GGTAAACAAATTAGCATCTA+AGG | + | chr1.1:7686474-7686493 | MS.gene51611:intron | 30.0% | |
| GGTATAATATTGCTCCTAAA+AGG | - | chr1.1:7689204-7689223 | None:intergenic | 30.0% | |
| GTGATTTCACAATGTCAATA+TGG | - | chr1.1:7687570-7687589 | None:intergenic | 30.0% | |
| GTTGTTTATGGAATAAGTCA+AGG | + | chr1.1:7685255-7685274 | MS.gene51611:CDS | 30.0% | |
| GTTTATCTGAATGCTGAAAA+TGG | + | chr1.1:7686508-7686527 | MS.gene51611:intron | 30.0% | |
| TAAAACCAACTTGTAAAGTG+AGG | + | chr1.1:7688294-7688313 | MS.gene51611:intron | 30.0% | |
| TAAGTCAATCTGGCATTAAT+CGG | + | chr1.1:7686122-7686141 | MS.gene51611:intron | 30.0% | |
| TATGGAATAAGTCAAGGTTT+AGG | + | chr1.1:7685261-7685280 | MS.gene51611:CDS | 30.0% | |
| TCGTGAATACAAAAGACATT+TGG | - | chr1.1:7688215-7688234 | None:intergenic | 30.0% | |
| TCTTCTTCCAAAAGAAAATG+TGG | + | chr1.1:7689660-7689679 | MS.gene51611:CDS | 30.0% | |
| TGAGTTTAATCATTTGCACT+TGG | + | chr1.1:7686237-7686256 | MS.gene51611:intron | 30.0% | |
| TTATCTGAATGCTGAAAATG+GGG | + | chr1.1:7686510-7686529 | MS.gene51611:intron | 30.0% | |
| TTATTGGTATACAGACTCAA+AGG | + | chr1.1:7687812-7687831 | MS.gene51611:CDS | 30.0% | |
| TTGGATTGTTAAGCCTTTAT+GGG | + | chr1.1:7685383-7685402 | MS.gene51611:CDS | 30.0% | |
| TTTCTCACAGGTATTTGATT+AGG | + | chr1.1:7687845-7687864 | MS.gene51611:intron | 30.0% | |
| ! | ACTGATGTTCTTCCTATTTT+TGG | + | chr1.1:7685414-7685433 | MS.gene51611:CDS | 30.0% |
| ! | AGCTCAATTTATGTTCTAGA+TGG | + | chr1.1:7685527-7685546 | MS.gene51611:intron | 30.0% |
| ! | ATCTTTTCACCAAAAGTTAC+GGG | + | chr1.1:7688549-7688568 | MS.gene51611:intron | 30.0% |
| ! | CAAATGTTGATGGAATAACA+AGG | + | chr1.1:7688400-7688419 | MS.gene51611:intron | 30.0% |
| ! | CTGCTCATAACTATTACTTT+TGG | + | chr1.1:7686428-7686447 | MS.gene51611:intron | 30.0% |
| ! | GCTCAATTTATGTTCTAGAT+GGG | + | chr1.1:7685528-7685547 | MS.gene51611:intron | 30.0% |
| ! | TCCTTGAAGGAATGTTTTAT+TGG | + | chr1.1:7687796-7687815 | MS.gene51611:CDS | 30.0% |
| ! | TCTTTCTATTTTCCTCTGAT+CGG | + | chr1.1:7687486-7687505 | MS.gene51611:intron | 30.0% |
| ! | TTCTCTATGCTCTCTTTTTA+AGG | - | chr1.1:7688178-7688197 | None:intergenic | 30.0% |
| ! | TTTGAGACTGTTTGAGAATT+GGG | + | chr1.1:7688883-7688902 | MS.gene51611:intron | 30.0% |
| !! | CTAATGTCAATTGATAATGC+TGG | + | chr1.1:7689472-7689491 | MS.gene51611:CDS | 30.0% |
| !! | TGATATCTTAGGCTTTGTTT+GGG | + | chr1.1:7685713-7685732 | MS.gene51611:intron | 30.0% |
| !! | TTGATATCTTAGGCTTTGTT+TGG | + | chr1.1:7685712-7685731 | MS.gene51611:intron | 30.0% |
| !!! | CGAATTTTAAGGCTTTGTTT+GGG | - | chr1.1:7686093-7686112 | None:intergenic | 30.0% |
| !!! | TTCTTCCTATTTTTGGATAC+CGG | + | chr1.1:7685421-7685440 | MS.gene51611:CDS | 30.0% |
| !!! | TTTGGTTAGCGATTTTGATT+CGG | + | chr1.1:7689569-7689588 | MS.gene51611:CDS | 30.0% |
| AAAATCAAGAGGCTAACCAT+AGG | - | chr1.1:7687220-7687239 | None:intergenic | 35.0% | |
| AAAGAGTTAGGATCAACTCT+AGG | - | chr1.1:7689637-7689656 | None:intergenic | 35.0% | |
| AAATCAAGAGGCTAACCATA+GGG | - | chr1.1:7687219-7687238 | None:intergenic | 35.0% | |
| AAATGCAAGACAAAGGTTAC+TGG | - | chr1.1:7689129-7689148 | None:intergenic | 35.0% | |
| AAATTGCCAACACAAGATGA+AGG | - | chr1.1:7687012-7687031 | None:intergenic | 35.0% | |
| AAGTCAATCTGGCATTAATC+GGG | + | chr1.1:7686123-7686142 | MS.gene51611:intron | 35.0% | |
| AATCCGGTATACCAAACTTT+AGG | - | chr1.1:7689330-7689349 | None:intergenic | 35.0% | |
| AATGTTCCTTCAATACCAGA+TGG | - | chr1.1:7689442-7689461 | None:intergenic | 35.0% | |
| ACAAAACTTCTCTTACAGAC+AGG | + | chr1.1:7687407-7687426 | MS.gene51611:CDS | 35.0% | |
| ACCAAAATTATAAGTCCAGC+TGG | - | chr1.1:7687360-7687379 | None:intergenic | 35.0% | |
| ACTAAAAACAGCATGCAAAG+TGG | - | chr1.1:7689613-7689632 | None:intergenic | 35.0% | |
| AGAAAATGTGGATTCAAAGG+TGG | + | chr1.1:7689672-7689691 | MS.gene51611:CDS | 35.0% | |
| AGAAACCAAGGATGTTGAAT+TGG | + | chr1.1:7689711-7689730 | MS.gene51611:CDS | 35.0% | |
| AGATTGGACTCTTAGTCAAA+AGG | + | chr1.1:7686270-7686289 | MS.gene51611:intron | 35.0% | |
| AGTTGTAAGTGCGGTTTATA+GGG | + | chr1.1:7685682-7685701 | MS.gene51611:intron | 35.0% | |
| ATAGAAGACATTGAGAAGAG+AGG | - | chr1.1:7686012-7686031 | None:intergenic | 35.0% | |
| ATATATATTTGTGGCTGCCA+TGG | + | chr1.1:7688742-7688761 | MS.gene51611:intron | 35.0% | |
| ATCACAACAAAGACGTAATC+CGG | - | chr1.1:7689346-7689365 | None:intergenic | 35.0% | |
| ATGAAACCTATACTTTCCTG+TGG | - | chr1.1:7689156-7689175 | None:intergenic | 35.0% | |
| ATGTCTCAATGATTGCAATG+AGG | - | chr1.1:7686639-7686658 | None:intergenic | 35.0% | |
| ATTCTCAGAAACATCGTAGT+AGG | + | chr1.1:7687526-7687545 | MS.gene51611:intron | 35.0% | |
| CAAAAAGACTCCTAATCACA+AGG | - | chr1.1:7688826-7688845 | None:intergenic | 35.0% | |
| CAAATACCTGTGAGAAAGAT+GGG | - | chr1.1:7687842-7687861 | None:intergenic | 35.0% | |
| CATAAAGGCTTAACAATCCA+AGG | - | chr1.1:7685384-7685403 | None:intergenic | 35.0% | |
| CTGAGTTTGAATATCCTTGA+AGG | + | chr1.1:7687783-7687802 | MS.gene51611:CDS | 35.0% | |
| CTGGAATTACATCTATTCCT+TGG | + | chr1.1:7685364-7685383 | MS.gene51611:CDS | 35.0% | |
| CTTAGATCGCAAGGATATAA+GGG | + | chr1.1:7686679-7686698 | MS.gene51611:intron | 35.0% | |
| CTTATTTATCCTTGAGGTAG+AGG | - | chr1.1:7688794-7688813 | None:intergenic | 35.0% | |
| CTTGGATTGTTAAGCCTTTA+TGG | + | chr1.1:7685382-7685401 | MS.gene51611:CDS | 35.0% | |
| GAACCTAAAGTTTGGTATAC+CGG | + | chr1.1:7689324-7689343 | MS.gene51611:CDS | 35.0% | |
| GATATTCAAACTCAGTGCAA+AGG | - | chr1.1:7687778-7687797 | None:intergenic | 35.0% | |
| GCATTTCATCTTCCCTTATA+TGG | + | chr1.1:7687907-7687926 | MS.gene51611:intron | 35.0% | |
| GGAAGAAGAATGAAAGAGTT+AGG | - | chr1.1:7689649-7689668 | None:intergenic | 35.0% | |
| GTCTCACATCTTATAAGATG+TGG | - | chr1.1:7686193-7686212 | None:intergenic | 35.0% | |
| GTCTTGCATCAAATGATAGA+AGG | - | chr1.1:7688028-7688047 | None:intergenic | 35.0% | |
| TAGAAGACATTGAGAAGAGA+GGG | - | chr1.1:7686011-7686030 | None:intergenic | 35.0% | |
| TAGAAGGGTTATAAACGAGA+TGG | + | chr1.1:7686791-7686810 | MS.gene51611:intron | 35.0% | |
| TAGATAAGTTCACTGGAACT+TGG | + | chr1.1:7688502-7688521 | MS.gene51611:intron | 35.0% | |
| TATTGACACTTCAGAAACCA+AGG | + | chr1.1:7689699-7689718 | MS.gene51611:CDS | 35.0% | |
| TCAAAAATTGTATTGGGGGA+GGG | - | chr1.1:7685934-7685953 | None:intergenic | 35.0% | |
| TCAAATACCTGTGAGAAAGA+TGG | - | chr1.1:7687843-7687862 | None:intergenic | 35.0% | |
| TCTCGTTTATAACCCTTCTA+AGG | - | chr1.1:7686791-7686810 | None:intergenic | 35.0% | |
| TCTTCTATTGGTGCACTATT+AGG | + | chr1.1:7687157-7687176 | MS.gene51611:CDS | 35.0% | |
| TGAAAACCTTCATCTTGTGT+TGG | + | chr1.1:7687003-7687022 | MS.gene51611:CDS | 35.0% | |
| TGAAATTCTCATGTCTACTG+TGG | + | chr1.1:7687990-7688009 | MS.gene51611:intron | 35.0% | |
| TGAAGAATCAAGATGTATGG+AGG | + | chr1.1:7687730-7687749 | MS.gene51611:CDS | 35.0% | |
| TGCACCAATAGAAGAACTAA+AGG | - | chr1.1:7687152-7687171 | None:intergenic | 35.0% | |
| TGGAAGAAAATGCAAGACAA+AGG | - | chr1.1:7689136-7689155 | None:intergenic | 35.0% | |
| TGGACTTCTTTCATCATCAT+GGG | + | chr1.1:7689492-7689511 | MS.gene51611:CDS | 35.0% | |
| TGGATTGTTAAGCCTTTATG+GGG | + | chr1.1:7685384-7685403 | MS.gene51611:CDS | 35.0% | |
| TTCAATAAGCTCTCCATGAT+AGG | + | chr1.1:7688957-7688976 | MS.gene51611:intron | 35.0% | |
| TTCATGAGACAACCTTAGAA+GGG | + | chr1.1:7686776-7686795 | MS.gene51611:intron | 35.0% | |
| TTTCATGAGACAACCTTAGA+AGG | + | chr1.1:7686775-7686794 | MS.gene51611:intron | 35.0% | |
| TTTCTCCGGTATCCAAAAAT+AGG | - | chr1.1:7685429-7685448 | None:intergenic | 35.0% | |
| TTTGCATCAAGTGAGTTAGA+AGG | + | chr1.1:7688094-7688113 | MS.gene51611:intron | 35.0% | |
| ! | AAGGGTTTTACTTATAGCAG+TGG | + | chr1.1:7688419-7688438 | MS.gene51611:intron | 35.0% |
| ! | ACACAAGATGAAGGTTTTCA+TGG | - | chr1.1:7687003-7687022 | None:intergenic | 35.0% |
| ! | CTTGTGATTAGGAGTCTTTT+TGG | + | chr1.1:7688824-7688843 | MS.gene51611:intron | 35.0% |
| ! | GAATTTTTGTCGCTCATTGA+TGG | + | chr1.1:7686934-7686953 | MS.gene51611:intron | 35.0% |
| ! | GATTAATGCCAGATTGACTT+AGG | - | chr1.1:7686123-7686142 | None:intergenic | 35.0% |
| ! | TAGGTCTAACCCGAATTTTA+AGG | - | chr1.1:7686104-7686123 | None:intergenic | 35.0% |
| ! | TATTTTCAATCAGGCTCAGT+CGG | + | chr1.1:7689175-7689194 | MS.gene51611:CDS | 35.0% |
| ! | TCATTTGTACTTTTGCCAAG+TGG | - | chr1.1:7688703-7688722 | None:intergenic | 35.0% |
| ! | TCCAGCTGGACTTATAATTT+TGG | + | chr1.1:7687356-7687375 | MS.gene51611:CDS | 35.0% |
| ! | TTGACTCGAAATAAAGCTCT+CGG | - | chr1.1:7688143-7688162 | None:intergenic | 35.0% |
| ! | TTGATGGTTGCAGGTTTATT+AGG | + | chr1.1:7686950-7686969 | MS.gene51611:intron | 35.0% |
| ! | TTTCTTCCACAGGAAAGTAT+AGG | + | chr1.1:7689147-7689166 | MS.gene51611:intron | 35.0% |
| !! | CTTTGAGACTGTTTGAGAAT+TGG | + | chr1.1:7688882-7688901 | MS.gene51611:intron | 35.0% |
| !! | GCTGGACTTATAATTTTGGT+CGG | + | chr1.1:7687360-7687379 | MS.gene51611:CDS | 35.0% |
| !! | TCATCTTGTGTTGGCAATTT+TGG | + | chr1.1:7687012-7687031 | MS.gene51611:CDS | 35.0% |
| !! | TGTGCCTTTAGTTCTTCTAT+TGG | + | chr1.1:7687145-7687164 | MS.gene51611:CDS | 35.0% |
| !! | TGTGTTTCTTATAGTGGATG+TGG | + | chr1.1:7686825-7686844 | MS.gene51611:intron | 35.0% |
| !!! | CCGAATTTTAAGGCTTTGTT+TGG | - | chr1.1:7686094-7686113 | None:intergenic | 35.0% |
| !!! | TTTTGAGTTCCTCCAAATGA+GGG | + | chr1.1:7685948-7685967 | MS.gene51611:intron | 35.0% |
| !!! | TTTTTGAGTTCCTCCAAATG+AGG | + | chr1.1:7685947-7685966 | MS.gene51611:intron | 35.0% |
| AAAAAATCCCCCTCATTTGG+AGG | - | chr1.1:7685960-7685979 | None:intergenic | 40.0% | |
| AAAACCGGTCTTTGAGCATT+TGG | + | chr1.1:7686296-7686315 | MS.gene51611:intron | 40.0% | |
| AAACCGGTCTTTGAGCATTT+GGG | + | chr1.1:7686297-7686316 | MS.gene51611:intron | 40.0% | |
| AACTTTGCATGTCAGAAGCA+AGG | - | chr1.1:7687123-7687142 | None:intergenic | 40.0% | |
| AAGTGGTGCAATTGTTGTGA+AGG | + | chr1.1:7687932-7687951 | MS.gene51611:intron | 40.0% | |
| AATGGGGTCATTATCTCGTT+TGG | + | chr1.1:7686526-7686545 | MS.gene51611:intron | 40.0% | |
| ACCATTGTTCCGTAACATCT+TGG | - | chr1.1:7686556-7686575 | None:intergenic | 40.0% | |
| ACTTTGCATGTCAGAAGCAA+GGG | - | chr1.1:7687122-7687141 | None:intergenic | 40.0% | |
| AGAACGTGGACAAATGTTGA+TGG | + | chr1.1:7688390-7688409 | MS.gene51611:intron | 40.0% | |
| AGACACCAATTCAACATCCT+TGG | - | chr1.1:7689719-7689738 | None:intergenic | 40.0% | |
| AGTTCACTGGAACTTGGTAT+TGG | + | chr1.1:7688508-7688527 | MS.gene51611:intron | 40.0% | |
| AGTTGCTCTATGGTCTATCA+GGG | + | chr1.1:7689272-7689291 | MS.gene51611:CDS | 40.0% | |
| ATAGCCCTCACTTTACAAGT+TGG | - | chr1.1:7688302-7688321 | None:intergenic | 40.0% | |
| ATATAAGGGACACAGTCTCT+AGG | + | chr1.1:7686693-7686712 | MS.gene51611:intron | 40.0% | |
| ATGAGCAGGGTTTCAAATTG+CGG | - | chr1.1:7686416-7686435 | None:intergenic | 40.0% | |
| ATTTATCCTTGAGGTAGAGG+CGG | - | chr1.1:7688791-7688810 | None:intergenic | 40.0% | |
| CATTTGCACTTGGATACCAT+GGG | + | chr1.1:7686247-7686266 | MS.gene51611:intron | 40.0% | |
| CCATTGTTCCGTAACATCTT+GGG | - | chr1.1:7686555-7686574 | None:intergenic | 40.0% | |
| CGTGCTTATGGTAATTTCCA+TGG | + | chr1.1:7687622-7687641 | MS.gene51611:intron | 40.0% | |
| CGTTTAGTGAGTTGTAAGTG+CGG | + | chr1.1:7685673-7685692 | MS.gene51611:intron | 40.0% | |
| CTCAAAAATTGTATTGGGGG+AGG | - | chr1.1:7685935-7685954 | None:intergenic | 40.0% | |
| CTCTCGGAGTACATGTAAAT+GGG | - | chr1.1:7688127-7688146 | None:intergenic | 40.0% | |
| CTGAAAAAGTGGTTCCAAGA+GGG | - | chr1.1:7686169-7686188 | None:intergenic | 40.0% | |
| CTGGACTTCTTTCATCATCA+TGG | + | chr1.1:7689491-7689510 | MS.gene51611:CDS | 40.0% | |
| GAGTTGTAAGTGCGGTTTAT+AGG | + | chr1.1:7685681-7685700 | MS.gene51611:intron | 40.0% | |
| GCAATTGTTGTGAAGGTAGT+GGG | + | chr1.1:7687939-7687958 | MS.gene51611:intron | 40.0% | |
| GCTTAGATCGCAAGGATATA+AGG | + | chr1.1:7686678-7686697 | MS.gene51611:intron | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | - | chr1.1:7686040-7686059 | None:intergenic | 40.0% | |
| GGAATAAGTCAAGGTTTAGG+TGG | + | chr1.1:7685264-7685283 | MS.gene51611:CDS | 40.0% | |
| GGACTTCTTTCATCATCATG+GGG | + | chr1.1:7689493-7689512 | MS.gene51611:CDS | 40.0% | |
| GGCATCTTTGTTCACCTTAT+AGG | + | chr1.1:7687193-7687212 | MS.gene51611:CDS | 40.0% | |
| GGGTTGAAGCTTGATATCTT+AGG | + | chr1.1:7685702-7685721 | MS.gene51611:intron | 40.0% | |
| GTCAAATGTAGCTTCAGTTG+CGG | + | chr1.1:7686613-7686632 | MS.gene51611:intron | 40.0% | |
| TAAGATGTGGCCTGAAAAAG+TGG | - | chr1.1:7686180-7686199 | None:intergenic | 40.0% | |
| TCAGTAAGAAGACCCCATAA+AGG | - | chr1.1:7685399-7685418 | None:intergenic | 40.0% | |
| TCATTTGCACTTGGATACCA+TGG | + | chr1.1:7686246-7686265 | MS.gene51611:intron | 40.0% | |
| TCTTCCCTTATATGGACAAG+TGG | + | chr1.1:7687915-7687934 | MS.gene51611:intron | 40.0% | |
| TGCAATTGTTGTGAAGGTAG+TGG | + | chr1.1:7687938-7687957 | MS.gene51611:intron | 40.0% | |
| TGCACCACTTGTCCATATAA+GGG | - | chr1.1:7687922-7687941 | None:intergenic | 40.0% | |
| TGGTATACAGACTCAAAGGA+TGG | + | chr1.1:7687816-7687835 | MS.gene51611:CDS | 40.0% | |
| TTGCACCACTTGTCCATATA+AGG | - | chr1.1:7687923-7687942 | None:intergenic | 40.0% | |
| TTTGAGCTGAGTACAAGCAT+AGG | - | chr1.1:7689412-7689431 | None:intergenic | 40.0% | |
| ! | ACTTTTGCCATATCTCGATG+TGG | + | chr1.1:7688338-7688357 | MS.gene51611:intron | 40.0% |
| ! | ACTTTTGGCGCTTTTGCTTT+TGG | + | chr1.1:7686443-7686462 | MS.gene51611:intron | 40.0% |
| ! | ATACTCGAACCCGTAACTTT+TGG | - | chr1.1:7688561-7688580 | None:intergenic | 40.0% |
| ! | ATTAATCGGGTTGTAAGGTG+AGG | + | chr1.1:7686136-7686155 | MS.gene51611:intron | 40.0% |
| ! | CTTTGTCCATCTGGTATTGA+AGG | + | chr1.1:7689433-7689452 | MS.gene51611:CDS | 40.0% |
| ! | CTTTTGCCATATCTCGATGT+GGG | + | chr1.1:7688339-7688358 | MS.gene51611:intron | 40.0% |
| ! | GGTTTTACTTATAGCAGTGG+CGG | + | chr1.1:7688422-7688441 | MS.gene51611:intron | 40.0% |
| ! | TAGGTGTTATATTAGGGCCA+TGG | - | chr1.1:7687642-7687661 | None:intergenic | 40.0% |
| ! | TCTCTTGTACACAGTGTTGA+TGG | + | chr1.1:7689736-7689755 | MS.gene51611:CDS | 40.0% |
| ! | TGAGAATTGGGAGAGCATAT+GGG | + | chr1.1:7688895-7688914 | MS.gene51611:intron | 40.0% |
| ! | TGTCTTGCATTTTCTTCCAC+AGG | + | chr1.1:7689137-7689156 | MS.gene51611:intron | 40.0% |
| ! | TTAATCGGGTTGTAAGGTGA+GGG | + | chr1.1:7686137-7686156 | MS.gene51611:intron | 40.0% |
| ! | TTGAGAATTGGGAGAGCATA+TGG | + | chr1.1:7688894-7688913 | MS.gene51611:intron | 40.0% |
| ! | TTTGAGTTCCTCCAAATGAG+GGG | + | chr1.1:7685949-7685968 | MS.gene51611:intron | 40.0% |
| ! | TTTGGCTTCCCAAGATGTTA+CGG | + | chr1.1:7686544-7686563 | MS.gene51611:intron | 40.0% |
| ! | TTTTGATATCTGCTAGGCCA+CGG | + | chr1.1:7686338-7686357 | MS.gene51611:intron | 40.0% |
| ! | TTTTGGACTCAGTTGCTCTA+TGG | + | chr1.1:7689262-7689281 | MS.gene51611:CDS | 40.0% |
| !! | CAAGGGTTTTGATATCTGCT+AGG | + | chr1.1:7686332-7686351 | MS.gene51611:intron | 40.0% |
| !! | CGTAATCCTTTAGAGCGTAT+TGG | - | chr1.1:7689225-7689244 | None:intergenic | 40.0% |
| !! | CTTTTGGCGCTTTTGCTTTT+GGG | + | chr1.1:7686444-7686463 | MS.gene51611:intron | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr1.1:7686086-7686105 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr1.1:7685720-7685739 | MS.gene51611:intron | 40.0% |
| !!! | CAATTTTGGCCTTAACAGCA+GGG | + | chr1.1:7687026-7687045 | MS.gene51611:CDS | 40.0% |
| !!! | TTTTTCTCATAGGGGGTGTT+TGG | + | chr1.1:7687321-7687340 | MS.gene51611:intron | 40.0% |
| ACATTGAGAAGAGAGGGCTT+TGG | - | chr1.1:7686005-7686024 | None:intergenic | 45.0% | |
| ACTAAGAGTCCAATCTCCCA+TGG | - | chr1.1:7686266-7686285 | None:intergenic | 45.0% | |
| ACTTGGATACCATGGGAGAT+TGG | + | chr1.1:7686254-7686273 | MS.gene51611:intron | 45.0% | |
| ATGGTAGAACAGCGACGATT+AGG | - | chr1.1:7688983-7689002 | None:intergenic | 45.0% | |
| CACCAAAACTTTGTGGATGC+CGG | + | chr1.1:7687687-7687706 | MS.gene51611:CDS | 45.0% | |
| CAGTTGCTCTATGGTCTATC+AGG | + | chr1.1:7689271-7689290 | MS.gene51611:CDS | 45.0% | |
| CCCAAGATGTTACGGAACAA+TGG | + | chr1.1:7686552-7686571 | MS.gene51611:intron | 45.0% | |
| CCTGAAAAAGTGGTTCCAAG+AGG | - | chr1.1:7686170-7686189 | None:intergenic | 45.0% | |
| CTAGGTGCACCAAAACTTTG+TGG | + | chr1.1:7687680-7687699 | MS.gene51611:intron | 45.0% | |
| CTCAACACACTCTCATGTTC+AGG | + | chr1.1:7688364-7688383 | MS.gene51611:intron | 45.0% | |
| CTGTGCAACACATGCATCAA+TGG | - | chr1.1:7687080-7687099 | None:intergenic | 45.0% | |
| CTTCTTTCATCATCATGGGG+TGG | + | chr1.1:7689496-7689515 | MS.gene51611:CDS | 45.0% | |
| GCATAAACCTGTGCTTCAGA+AGG | - | chr1.1:7685345-7685364 | None:intergenic | 45.0% | |
| GCTCTCGGAGTACATGTAAA+TGG | - | chr1.1:7688128-7688147 | None:intergenic | 45.0% | |
| GGGTTAGACCTAAGTCAATC+TGG | + | chr1.1:7686112-7686131 | MS.gene51611:intron | 45.0% | |
| TCATGTTCAGGACTAGAACG+TGG | + | chr1.1:7688376-7688395 | MS.gene51611:intron | 45.0% | |
| TGAGATCCCACATCGAGATA+TGG | - | chr1.1:7688348-7688367 | None:intergenic | 45.0% | |
| TGTTCACCTTATAGGCCCTA+TGG | + | chr1.1:7687201-7687220 | MS.gene51611:CDS | 45.0% | |
| TTGAGTTCCTCCAAATGAGG+GGG | + | chr1.1:7685950-7685969 | MS.gene51611:intron | 45.0% | |
| ! | AGCTCAAAGCTTTGTCCATC+TGG | + | chr1.1:7689424-7689443 | MS.gene51611:CDS | 45.0% |
| ! | CTGGCATTAATCGGGTTGTA+AGG | + | chr1.1:7686131-7686150 | MS.gene51611:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr1.1:7685725-7685744 | MS.gene51611:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr1.1:7685744-7685725 | None:intergenic | 45.0% |
| ! | GGTTTGATGACTATTCCAGC+TGG | + | chr1.1:7687342-7687361 | MS.gene51611:CDS | 45.0% |
| ! | TCTGAAGCACAGGTTTATGC+TGG | + | chr1.1:7685345-7685364 | MS.gene51611:CDS | 45.0% |
| ! | TGTATTGGGGGAGGGTTTTA+GGG | - | chr1.1:7685926-7685945 | None:intergenic | 45.0% |
| ! | TTGTATTGGGGGAGGGTTTT+AGG | - | chr1.1:7685927-7685946 | None:intergenic | 45.0% |
| !! | AGTTCAACCTTCTGAAGCAC+AGG | + | chr1.1:7685335-7685354 | MS.gene51611:CDS | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr1.1:7685724-7685743 | MS.gene51611:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr1.1:7685743-7685724 | None:intergenic | 45.0% |
| !! | TTGTTGTGAAGGTAGTGGGT+TGG | + | chr1.1:7687943-7687962 | MS.gene51611:intron | 45.0% |
| !!! | AGGGGAGGGTTTTGGAAAAA+AGG | - | chr1.1:7686053-7686072 | None:intergenic | 45.0% |
| !!! | CCTCTTGGAACCACTTTTTC+AGG | + | chr1.1:7686167-7686186 | MS.gene51611:intron | 45.0% |
| !!! | GCAATTTTGGCCTTAACAGC+AGG | + | chr1.1:7687025-7687044 | MS.gene51611:CDS | 45.0% |
| AAACTTTGTGGATGCCGGCA+AGG | + | chr1.1:7687692-7687711 | MS.gene51611:CDS | 50.0% | |
| AGCGACGATTAGGCCTATCA+TGG | - | chr1.1:7688973-7688992 | None:intergenic | 50.0% | |
| AGGTATGCACGTTCGTACCT+TGG | - | chr1.1:7688657-7688676 | None:intergenic | 50.0% | |
| ATGTCGCAGCTTAGATCGCA+AGG | + | chr1.1:7686670-7686689 | MS.gene51611:intron | 50.0% | |
| CCACCCAAATGCTCAAAGAC+CGG | - | chr1.1:7686303-7686322 | None:intergenic | 50.0% | |
| CGATCTAAGCTGCGACATCA+AGG | - | chr1.1:7686668-7686687 | None:intergenic | 50.0% | |
| CGTGCATACCTCTGCTTAAC+AGG | + | chr1.1:7688666-7688685 | MS.gene51611:intron | 50.0% | |
| CTTGTGCATGATCCGATCAG+AGG | - | chr1.1:7687501-7687520 | None:intergenic | 50.0% | |
| CTTTCATCATCATGGGGTGG+TGG | + | chr1.1:7689499-7689518 | MS.gene51611:CDS | 50.0% | |
| GGCTAACCATAGGGCCTATA+AGG | - | chr1.1:7687210-7687229 | None:intergenic | 50.0% | |
| GTCAGAAGCAAGGGAAGGAT+GGG | - | chr1.1:7687113-7687132 | None:intergenic | 50.0% | |
| TGCATGTCAGAAGCAAGGGA+AGG | - | chr1.1:7687118-7687137 | None:intergenic | 50.0% | |
| TGTCAGAAGCAAGGGAAGGA+TGG | - | chr1.1:7687114-7687133 | None:intergenic | 50.0% | |
| TTCAAACACGACCTGATCCG+TGG | - | chr1.1:7686358-7686377 | None:intergenic | 50.0% | |
| TTGGGTGGTTGCGACTTCAA+GGG | + | chr1.1:7686315-7686334 | MS.gene51611:intron | 50.0% | |
| TTTGGGTGGTTGCGACTTCA+AGG | + | chr1.1:7686314-7686333 | MS.gene51611:intron | 50.0% | |
| ! | TGCCGGCATCCACAAAGTTT+TGG | - | chr1.1:7687692-7687711 | None:intergenic | 50.0% |
| ! | TGTAGTCCACATAGCCTTGC+CGG | - | chr1.1:7687709-7687728 | None:intergenic | 50.0% |
| ! | TGTCGCTCATTGATGGTTGC+AGG | + | chr1.1:7686941-7686960 | MS.gene51611:intron | 50.0% |
| ! | TTGAGAAGAGAGGGCTTTGG+AGG | - | chr1.1:7686002-7686021 | None:intergenic | 50.0% |
| !! | CTTTTGCTTTTGGGTGGGTG+GGG | + | chr1.1:7686453-7686472 | MS.gene51611:intron | 50.0% |
| !! | GCTTTTGCTTTTGGGTGGGT+GGG | + | chr1.1:7686452-7686471 | MS.gene51611:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr1.1:7685723-7685742 | MS.gene51611:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr1.1:7685742-7685723 | None:intergenic | 50.0% |
| !! | GTATTGGGGGAGGGTTTTAG+GGG | - | chr1.1:7685925-7685944 | None:intergenic | 50.0% |
| !! | TGGCGCTTTTGCTTTTGGGT+GGG | + | chr1.1:7686448-7686467 | MS.gene51611:intron | 50.0% |
| !! | TTGGCGCTTTTGCTTTTGGG+TGG | + | chr1.1:7686447-7686466 | MS.gene51611:intron | 50.0% |
| !!! | AGGGTTTTAGGGGGTTATGG+AGG | - | chr1.1:7685915-7685934 | None:intergenic | 50.0% |
| !!! | GGGTTTTAGGGGGTTATGGA+GGG | - | chr1.1:7685914-7685933 | None:intergenic | 50.0% |
| !!! | TATTGGGGGAGGGTTTTAGG+GGG | - | chr1.1:7685924-7685943 | None:intergenic | 50.0% |
| CCGGTCTTTGAGCATTTGGG+TGG | + | chr1.1:7686300-7686319 | MS.gene51611:intron | 55.0% | |
| GGATGGCCCATCTTTCTCAC+AGG | + | chr1.1:7687833-7687852 | MS.gene51611:CDS | 55.0% | |
| GGTTTAGGTGGTGCTCTTGC+TGG | + | chr1.1:7685276-7685295 | MS.gene51611:CDS | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | chr1.1:7685729-7685748 | MS.gene51611:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr1.1:7685748-7685729 | None:intergenic | 55.0% | |
| TATCTGCTAGGCCACGGATC+AGG | + | chr1.1:7686344-7686363 | MS.gene51611:intron | 55.0% | |
| TCCAGCACTCCCTGCTGTTA+AGG | - | chr1.1:7687038-7687057 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr1.1:7685728-7685747 | MS.gene51611:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr1.1:7685747-7685728 | None:intergenic | 55.0% | |
| TTTGCCAAGTGGCTATGCGC+AGG | - | chr1.1:7688692-7688711 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr1.1:7685749-7685730 | None:intergenic | 55.0% | |
| !! | CGCTTTTGCTTTTGGGTGGG+TGG | + | chr1.1:7686451-7686470 | MS.gene51611:intron | 55.0% |
| !! | GGCTCAGTCGGTTCCCTTTT+AGG | + | chr1.1:7689187-7689206 | MS.gene51611:CDS | 55.0% |
| !!! | GGGAGGGTTTTAGGGGGTTA+TGG | - | chr1.1:7685918-7685937 | None:intergenic | 55.0% |
| AGGCGGAGCTTCCTTGTGAC+AGG | - | chr1.1:7688774-7688793 | None:intergenic | 60.0% | |
| CATGGCATCCCCCTGTCACA+AGG | + | chr1.1:7688760-7688779 | MS.gene51611:intron | 60.0% | |
| CGGAGCTTCCTTGTGACAGG+GGG | - | chr1.1:7688771-7688790 | None:intergenic | 60.0% | |
| CTTGTGACAGGGGGATGCCA+TGG | - | chr1.1:7688762-7688781 | None:intergenic | 60.0% | |
| GAAGCTCCGCCTCTACCTCA+AGG | + | chr1.1:7688782-7688801 | MS.gene51611:intron | 60.0% | |
| GAGTTTGGAGGGGAGGGCTT+TGG | + | chr1.1:7685735-7685754 | MS.gene51611:intron | 60.0% | |
| GCGGAGCTTCCTTGTGACAG+GGG | - | chr1.1:7688772-7688791 | None:intergenic | 60.0% | |
| GGCGGAGCTTCCTTGTGACA+GGG | - | chr1.1:7688773-7688792 | None:intergenic | 60.0% | |
| GGTGAGGGATGTCTCCCTCT+TGG | + | chr1.1:7686152-7686171 | MS.gene51611:intron | 60.0% | |
| GGTGGTGCTCTTGCTGGTGT+TGG | + | chr1.1:7685282-7685301 | MS.gene51611:CDS | 60.0% | |
| TGCGCAGGCCTGTTAAGCAG+AGG | - | chr1.1:7688677-7688696 | None:intergenic | 60.0% | |
| TGGATGCCGGCAAGGCTATG+TGG | + | chr1.1:7687700-7687719 | MS.gene51611:CDS | 60.0% | |
| ! | GCCTTAACAGCAGGGAGTGC+TGG | + | chr1.1:7687034-7687053 | MS.gene51611:CDS | 60.0% |
| ! | TTTGGAGGGGAGGGCTTTGG+AGG | + | chr1.1:7685738-7685757 | MS.gene51611:intron | 60.0% |
| !! | AACAGCAGGGAGTGCTGGAG+TGG | + | chr1.1:7687039-7687058 | MS.gene51611:CDS | 60.0% |
| !! | TTGGAGGGGAGGGCTTTGGA+GGG | + | chr1.1:7685739-7685758 | MS.gene51611:intron | 60.0% |
| CAGGCCTGCGCATAGCCACT+TGG | + | chr1.1:7688685-7688704 | MS.gene51611:intron | 65.0% | |
| GAGTTTGGAGGGGAGGGGAG+GGG | - | chr1.1:7686071-7686090 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | chr1.1:7686072-7686091 | None:intergenic | 65.0% | |
| !! | AGGGGAGGGCTTTGGAGGGT+TGG | + | chr1.1:7685743-7685762 | MS.gene51611:intron | 65.0% |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | chr1.1:7686073-7686092 | None:intergenic | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | - | chr1.1:7686067-7686086 | None:intergenic | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | - | chr1.1:7686068-7686087 | None:intergenic | 70.0% | |
| ! | GGGAGGGGAGGGGAGGGTTT+TGG | - | chr1.1:7686061-7686080 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 7685253 | 7689768 | 7685253 | ID=MS.gene51611 |
| chr1.1 | mRNA | 7685253 | 7689768 | 7685253 | ID=MS.gene51611.t1;Parent=MS.gene51611 |
| chr1.1 | exon | 7685253 | 7685468 | 7685253 | ID=MS.gene51611.t1.exon1;Parent=MS.gene51611.t1 |
| chr1.1 | CDS | 7685253 | 7685468 | 7685253 | ID=cds.MS.gene51611.t1;Parent=MS.gene51611.t1 |
| chr1.1 | exon | 7686963 | 7687222 | 7686963 | ID=MS.gene51611.t1.exon2;Parent=MS.gene51611.t1 |
| chr1.1 | CDS | 7686963 | 7687222 | 7686963 | ID=cds.MS.gene51611.t1;Parent=MS.gene51611.t1 |
| chr1.1 | exon | 7687333 | 7687428 | 7687333 | ID=MS.gene51611.t1.exon3;Parent=MS.gene51611.t1 |
| chr1.1 | CDS | 7687333 | 7687428 | 7687333 | ID=cds.MS.gene51611.t1;Parent=MS.gene51611.t1 |
| chr1.1 | exon | 7687684 | 7687854 | 7687684 | ID=MS.gene51611.t1.exon4;Parent=MS.gene51611.t1 |
| chr1.1 | CDS | 7687684 | 7687854 | 7687684 | ID=cds.MS.gene51611.t1;Parent=MS.gene51611.t1 |
| chr1.1 | exon | 7689169 | 7689768 | 7689169 | ID=MS.gene51611.t1.exon5;Parent=MS.gene51611.t1 |
| chr1.1 | CDS | 7689169 | 7689768 | 7689169 | ID=cds.MS.gene51611.t1;Parent=MS.gene51611.t1 |
| Gene Sequence |
| Protein sequence |
