Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52176.t1 | XP_003623846.1 | 97.1 | 349 | 9 | 1 | 1 | 348 | 1 | 349 | 4.40E-185 | 657.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52176.t1 | O65090 | 67.8 | 311 | 93 | 2 | 38 | 348 | 40 | 343 | 3.3e-112 | 406.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52176.t1 | A2Q3P9 | 97.1 | 349 | 9 | 1 | 1 | 348 | 1 | 349 | 3.2e-185 | 657.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051364 | MS.gene52176 | -0.832596 | 8.64E-56 | -1.69E-46 |
| MS.gene051366 | MS.gene52176 | -0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene051367 | MS.gene52176 | -0.826293 | 2.94E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene52176 | 0.812197 | 4.79E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene52176 | 0.800783 | 1.23E-48 | -1.69E-46 |
| MS.gene05912 | MS.gene52176 | 0.81923 | 1.30E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene52176 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene52176 | 0.807904 | 4.03E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene52176 | -0.810337 | 1.21E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene52176 | 0.803936 | 2.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52176.t1 | MTR_7g076280 | 97.135 | 349 | 9 | 1 | 1 | 348 | 1 | 349 | 0.0 | 693 |
| MS.gene52176.t1 | MTR_3g007750 | 31.760 | 233 | 134 | 6 | 73 | 302 | 23 | 233 | 1.72e-22 | 97.1 |
| MS.gene52176.t1 | MTR_5g021210 | 29.268 | 246 | 144 | 7 | 78 | 317 | 34 | 255 | 1.35e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52176.t1 | AT1G01860 | 67.846 | 311 | 93 | 2 | 38 | 348 | 40 | 343 | 9.21e-151 | 428 |
| MS.gene52176.t1 | AT1G01860 | 66.552 | 290 | 90 | 2 | 38 | 327 | 40 | 322 | 3.29e-136 | 391 |
| MS.gene52176.t1 | AT1G01860 | 70.076 | 264 | 79 | 0 | 85 | 348 | 1 | 264 | 1.17e-132 | 379 |
| MS.gene52176.t1 | AT1G01860 | 68.724 | 243 | 76 | 0 | 85 | 327 | 1 | 243 | 4.21e-118 | 342 |
| MS.gene52176.t1 | AT1G01860 | 66.184 | 207 | 63 | 2 | 38 | 244 | 40 | 239 | 2.81e-92 | 276 |
| MS.gene52176.t1 | AT2G47420 | 32.479 | 234 | 132 | 6 | 73 | 302 | 25 | 236 | 7.22e-23 | 98.2 |
| MS.gene52176.t1 | AT5G66360 | 27.240 | 279 | 166 | 7 | 78 | 341 | 65 | 321 | 1.37e-20 | 92.0 |
| MS.gene52176.t1 | AT5G66360 | 34.000 | 150 | 79 | 3 | 78 | 224 | 65 | 197 | 6.14e-15 | 75.5 |
Find 76 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGATGTGGTGCTGGAAAT+TGG | 0.189630 | 7.4:+29225778 | MS.gene52176:CDS |
| AGATCCTGAGTACAAATTTA+AGG | 0.247250 | 7.4:+29228044 | MS.gene52176:intron |
| TCATCCAAGGTTAGTTCTTC+AGG | 0.295643 | 7.4:-29230114 | None:intergenic |
| TTCCAAACAATGATGATATA+TGG | 0.300819 | 7.4:-29226861 | None:intergenic |
| AAATTCTGGTGCATTTGTTC+TGG | 0.332103 | 7.4:+29225834 | MS.gene52176:CDS |
| GACATAAATGAGCAACTTGT+TGG | 0.349463 | 7.4:+29225736 | MS.gene52176:CDS |
| TTCTACGTAGCTTGCGGCCG+TGG | 0.365490 | 7.4:+29224848 | MS.gene52176:CDS |
| TTGGTCAAGGAACCAGTTCC+TGG | 0.367941 | 7.4:-29225802 | None:intergenic |
| ACCAATACTCTAATAAATTC+TGG | 0.369289 | 7.4:+29225820 | MS.gene52176:CDS |
| TACCTTCAACTTTCCTGTAC+TGG | 0.383159 | 7.4:-29226251 | None:intergenic |
| GCATGGTAATCGTCTTTGTT+TGG | 0.387600 | 7.4:-29224890 | None:intergenic |
| AAATGCAAACTGCTACTCTT+TGG | 0.400726 | 7.4:-29230163 | None:intergenic |
| AGGAGGAGACTGCTCTGCGC+TGG | 0.401092 | 7.4:+29227613 | MS.gene52176:intron |
| ACCAGAATTTATTAGAGTAT+TGG | 0.407064 | 7.4:-29225821 | None:intergenic |
| TGGTTTGTGGCGGGAGTTGA+AGG | 0.414978 | 7.4:-29224786 | None:intergenic |
| TCCCATATATCATCATTGTT+TGG | 0.419065 | 7.4:+29226859 | MS.gene52176:CDS |
| CTGGAAATTGGGCCAGGAAC+TGG | 0.421203 | 7.4:+29225790 | MS.gene52176:CDS |
| GAAATTAACAAATATATTGA+TGG | 0.429643 | 7.4:-29227670 | None:intergenic |
| TCCAAACAATGATGATATAT+GGG | 0.436718 | 7.4:-29226860 | None:intergenic |
| ATTTGTTCTGGCGGTTGAAA+AGG | 0.442610 | 7.4:+29225846 | MS.gene52176:CDS |
| ATATTGATGGGACGATACTC+AGG | 0.448686 | 7.4:-29227657 | None:intergenic |
| CTAAAGCTTCTTCTATCTCA+AGG | 0.450868 | 7.4:-29229923 | None:intergenic |
| TCGCGGCAGTGGTTTGTGGC+GGG | 0.451644 | 7.4:-29224795 | None:intergenic |
| GATTTCGCGGCAGTGGTTTG+TGG | 0.461430 | 7.4:-29224799 | None:intergenic |
| GAGCAACTTGTTGGCGTGGC+TGG | 0.461521 | 7.4:+29225745 | MS.gene52176:CDS |
| AGAAGTGGTTCTCTTGCTCC+AGG | 0.465553 | 7.4:+29227471 | MS.gene52176:CDS |
| GTGATGTGGTGCTGGAAATT+GGG | 0.468675 | 7.4:+29225779 | MS.gene52176:CDS |
| ATATTTGTTAATTTCTACTC+AGG | 0.473995 | 7.4:+29227678 | MS.gene52176:CDS |
| GAAATCCTACCGGCGACAAC+CGG | 0.474536 | 7.4:+29224816 | MS.gene52176:CDS |
| CGAGGAAGGTGATGTGGTGC+TGG | 0.488746 | 7.4:+29225771 | MS.gene52176:CDS |
| CTGAGAAAATGTCACCCATT+GGG | 0.495416 | 7.4:-29227450 | None:intergenic |
| AAGGTTGCGTTGTGAGATAT+TGG | 0.496294 | 7.4:-29224767 | None:intergenic |
| TTCCAGTACAGGAAAGTTGA+AGG | 0.501060 | 7.4:+29226249 | MS.gene52176:CDS |
| CCGGTAGGATTTCGCGGCAG+TGG | 0.508498 | 7.4:-29224806 | None:intergenic |
| GCGACCTTAAATTTGTACTC+AGG | 0.518265 | 7.4:-29228048 | None:intergenic |
| TACTCAGGGGTCCGGAGCGA+TGG | 0.528890 | 7.4:-29227642 | None:intergenic |
| TCGAAGCTCTGTTGTTTCCA+CGG | 0.529768 | 7.4:-29224865 | None:intergenic |
| GGAGGAGACTGCTCTGCGCT+GGG | 0.531734 | 7.4:+29227614 | MS.gene52176:intron |
| GATCAAATTACTACTCCCAA+TGG | 0.538395 | 7.4:+29227435 | MS.gene52176:CDS |
| TTGCGTTGTGAGATATTGGC+GGG | 0.539331 | 7.4:-29224763 | None:intergenic |
| TTGTCGCCGGTAGGATTTCG+CGG | 0.541168 | 7.4:-29224812 | None:intergenic |
| TGGGACGATACTCAGGGGTC+CGG | 0.546774 | 7.4:-29227650 | None:intergenic |
| ATCAAATTACTACTCCCAAT+GGG | 0.548471 | 7.4:+29227436 | MS.gene52176:CDS |
| TAAAGCTTCTTCTATCTCAA+GGG | 0.550131 | 7.4:-29229922 | None:intergenic |
| TCTGAGAAAATGTCACCCAT+TGG | 0.554276 | 7.4:-29227451 | None:intergenic |
| GTGGTGCTGGAAATTGGGCC+AGG | 0.554886 | 7.4:+29225784 | MS.gene52176:CDS |
| ATATCACTTACATTAGGCTG+AGG | 0.555378 | 7.4:-29228087 | None:intergenic |
| CCACTGCCGCGAAATCCTAC+CGG | 0.556187 | 7.4:+29224806 | MS.gene52176:CDS |
| AAGGCCTGAAGAACTAACCT+TGG | 0.561316 | 7.4:+29230110 | MS.gene52176:CDS |
| GGCGTGGCTGGTGTCGAGGA+AGG | 0.563328 | 7.4:+29225757 | MS.gene52176:CDS |
| GAAACTTGGGGATATTCTGA+TGG | 0.565564 | 7.4:-29229051 | None:intergenic |
| TTCGCGGCAGTGGTTTGTGG+CGG | 0.566211 | 7.4:-29224796 | None:intergenic |
| ACATCTGTACTGATATAGAA+AGG | 0.568986 | 7.4:-29227412 | None:intergenic |
| AAATTAACAAATATATTGAT+GGG | 0.571638 | 7.4:-29227669 | None:intergenic |
| CGACTCCGGTTGTCGCCGGT+AGG | 0.585962 | 7.4:-29224821 | None:intergenic |
| GAAGAAGCTTTAGAAAGCAT+AGG | 0.591998 | 7.4:+29229933 | MS.gene52176:CDS |
| TTCTGGTGCATTTGTTCTGG+CGG | 0.595156 | 7.4:+29225837 | MS.gene52176:CDS |
| GTTGCGTTGTGAGATATTGG+CGG | 0.595275 | 7.4:-29224764 | None:intergenic |
| CATTGCATAGGATAAACACA+TGG | 0.598047 | 7.4:+29226204 | MS.gene52176:intron |
| CTCAAAGCTCTCAACTCCAA+AGG | 0.598248 | 7.4:+29224917 | MS.gene52176:CDS |
| TGTTGGCGTGGCTGGTGTCG+AGG | 0.598664 | 7.4:+29225753 | MS.gene52176:CDS |
| CTTCAGTTTGAATGAGACAA+CGG | 0.599538 | 7.4:-29229025 | None:intergenic |
| ATTTATTAGAGTATTGGTCA+AGG | 0.601001 | 7.4:-29225815 | None:intergenic |
| TATTGATGGGACGATACTCA+GGG | 0.612770 | 7.4:-29227656 | None:intergenic |
| TGGAAAATCTTTCACTCACG+AGG | 0.612945 | 7.4:-29226231 | None:intergenic |
| CGAAAATTCTACGTAGCTTG+CGG | 0.614489 | 7.4:+29224842 | MS.gene52176:CDS |
| GCTGGGTAGAACCATCGCTC+CGG | 0.622517 | 7.4:+29227631 | MS.gene52176:CDS |
| TGAGAGCTTTGAGAGTGGCA+TGG | 0.631919 | 7.4:-29224907 | None:intergenic |
| ATCATTGTTTGGAAGCACAA+AGG | 0.633022 | 7.4:+29226870 | MS.gene52176:CDS |
| TATCACTTACATTAGGCTGA+GGG | 0.637069 | 7.4:-29228086 | None:intergenic |
| GGAGTTGAGAGCTTTGAGAG+TGG | 0.641571 | 7.4:-29224912 | None:intergenic |
| TGGTGTCGAGGAAGGTGATG+TGG | 0.664056 | 7.4:+29225765 | MS.gene52176:CDS |
| GGAAAATCTTTCACTCACGA+GGG | 0.671870 | 7.4:-29226230 | None:intergenic |
| AAATGAGCAACTTGTTGGCG+TGG | 0.677634 | 7.4:+29225741 | MS.gene52176:CDS |
| GGAGTGTTTGAAGATAACAT+AGG | 0.691852 | 7.4:-29224742 | None:intergenic |
| ATTGATGGGACGATACTCAG+GGG | 0.777275 | 7.4:-29227655 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAACAAATATATTGAT+GGG | - | chr7.4:29227672-29227691 | None:intergenic | 10.0% |
| !! | TAACTATTTAACTATAAAAA+AGG | + | chr7.4:29228869-29228888 | MS.gene52176:intron | 10.0% |
| !! | TAGTTAAATAGTTAAATAAA+TGG | - | chr7.4:29228863-29228882 | None:intergenic | 10.0% |
| !!! | AAATCACTTTAAAAAAAAAT+TGG | + | chr7.4:29227894-29227913 | MS.gene52176:intron | 10.0% |
| !!! | TTTTTCAAGATTTTTTTTAT+AGG | + | chr7.4:29228676-29228695 | MS.gene52176:intron | 10.0% |
| !! | AAAAAATATGTAGAGTAAAT+AGG | + | chr7.4:29229636-29229655 | MS.gene52176:intron | 15.0% |
| !! | AAAAATATGTAGAGTAAATA+GGG | + | chr7.4:29229637-29229656 | MS.gene52176:intron | 15.0% |
| !! | ATAATCTAGCAAAATTAATT+TGG | - | chr7.4:29227325-29227344 | None:intergenic | 15.0% |
| !! | GAAATTAACAAATATATTGA+TGG | - | chr7.4:29227673-29227692 | None:intergenic | 15.0% |
| !! | TAGAAAAAAAAGAAAAGAAA+GGG | - | chr7.4:29229534-29229553 | None:intergenic | 15.0% |
| !! | TAGAAATTTCAAAAATCATT+AGG | - | chr7.4:29226282-29226301 | None:intergenic | 15.0% |
| !! | TGCTAAAATAATGATAATTT+AGG | + | chr7.4:29226743-29226762 | MS.gene52176:intron | 15.0% |
| !!! | AGTTTGTTTTAGATTTATTA+TGG | - | chr7.4:29228406-29228425 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTATTTGCTTTT+TGG | + | chr7.4:29225014-29225033 | MS.gene52176:intron | 15.0% |
| !!! | CTATTTCTGTTAAATATTAT+TGG | + | chr7.4:29226123-29226142 | MS.gene52176:intron | 15.0% |
| !!! | CTTTTTTTTCTACAAAAATT+TGG | + | chr7.4:29229542-29229561 | MS.gene52176:intron | 15.0% |
| !! | AAAATATGTAGAGTAAATAG+GGG | + | chr7.4:29229638-29229657 | MS.gene52176:intron | 20.0% |
| !! | AAAATGCATTTGCTTAAATT+TGG | + | chr7.4:29225677-29225696 | MS.gene52176:intron | 20.0% |
| !! | AAATGCATTTGCTTAAATTT+GGG | + | chr7.4:29225678-29225697 | MS.gene52176:intron | 20.0% |
| !! | AATACTATATCACTTACATT+AGG | - | chr7.4:29228096-29228115 | None:intergenic | 20.0% |
| !! | ATGTACTTGAAAATATCAAA+AGG | + | chr7.4:29229683-29229702 | MS.gene52176:intron | 20.0% |
| !! | ATTATGAACACAATCATTTA+TGG | - | chr7.4:29227511-29227530 | None:intergenic | 20.0% |
| !! | CATTAATTATACAAGAAAAC+CGG | - | chr7.4:29226770-29226789 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAAATCAGATTT+AGG | - | chr7.4:29225426-29225445 | None:intergenic | 20.0% |
| !! | GGTACAATGATAAATTAATT+TGG | - | chr7.4:29229421-29229440 | None:intergenic | 20.0% |
| !! | GTAGAAAAAAAAGAAAAGAA+AGG | - | chr7.4:29229535-29229554 | None:intergenic | 20.0% |
| !! | TCATAATATTCAGATTCTAT+TGG | + | chr7.4:29227524-29227543 | MS.gene52176:intron | 20.0% |
| !! | TCCAAACAATAAAACATAAA+GGG | - | chr7.4:29225452-29225471 | None:intergenic | 20.0% |
| !! | TGTACTTGAAAATATCAAAA+GGG | + | chr7.4:29229684-29229703 | MS.gene52176:intron | 20.0% |
| !! | TGTGATTTCAATTATTAGAA+GGG | - | chr7.4:29229341-29229360 | None:intergenic | 20.0% |
| !! | TTAACTATAAAAAAGGAAGA+AGG | + | chr7.4:29228876-29228895 | MS.gene52176:intron | 20.0% |
| !! | TTCCAAACAATAAAACATAA+AGG | - | chr7.4:29225453-29225472 | None:intergenic | 20.0% |
| !! | TTGTGATTTCAATTATTAGA+AGG | - | chr7.4:29229342-29229361 | None:intergenic | 20.0% |
| !! | TTGTTTGGAAGTTATTTATA+TGG | + | chr7.4:29225463-29225482 | MS.gene52176:intron | 20.0% |
| !! | TTTGGCAAATGAAAAAATAA+TGG | - | chr7.4:29226964-29226983 | None:intergenic | 20.0% |
| !!! | AAAACCGTATTTTTTCTAAA+AGG | - | chr7.4:29229259-29229278 | None:intergenic | 20.0% |
| !!! | AAACCGTATTTTTTCTAAAA+GGG | - | chr7.4:29229258-29229277 | None:intergenic | 20.0% |
| !!! | AAATAATGATAATTTAGGAC+CGG | + | chr7.4:29226748-29226767 | MS.gene52176:intron | 20.0% |
| !!! | ATATTTGTTAATTTCTACTC+AGG | + | chr7.4:29227678-29227697 | MS.gene52176:CDS | 20.0% |
| !!! | GACAAGAATTTTTTCTAAAA+GGG | + | chr7.4:29229720-29229739 | MS.gene52176:intron | 20.0% |
| !!! | GATTTTTTTTCCTGATAATA+TGG | - | chr7.4:29226375-29226394 | None:intergenic | 20.0% |
| !!! | TATTGTTGTTTAGTAGTTTA+GGG | - | chr7.4:29226939-29226958 | None:intergenic | 20.0% |
| !!! | TGACTTATTTGTATCATTTT+TGG | + | chr7.4:29226095-29226114 | MS.gene52176:intron | 20.0% |
| !!! | TTGTTTTAGATTTATTATGG+TGG | - | chr7.4:29228403-29228422 | None:intergenic | 20.0% |
| ! | AAAAAAGAAAAGAAAGGGAA+AGG | - | chr7.4:29229529-29229548 | None:intergenic | 25.0% |
| ! | AAATGAAATTCAGTGAGTAA+GGG | - | chr7.4:29230028-29230047 | None:intergenic | 25.0% |
| ! | AATGCAATAAGAAGAATTTG+AGG | - | chr7.4:29226609-29226628 | None:intergenic | 25.0% |
| ! | AATTCACTTTCCATATTATC+AGG | + | chr7.4:29226362-29226381 | MS.gene52176:intron | 25.0% |
| ! | ACAACAAGTTACATATAATC+TGG | - | chr7.4:29227349-29227368 | None:intergenic | 25.0% |
| ! | ACCAATACTCTAATAAATTC+TGG | + | chr7.4:29225820-29225839 | MS.gene52176:CDS | 25.0% |
| ! | ACCAGAATTTATTAGAGTAT+TGG | - | chr7.4:29225824-29225843 | None:intergenic | 25.0% |
| ! | AGCATAAAATACACCAAATT+TGG | - | chr7.4:29228003-29228022 | None:intergenic | 25.0% |
| ! | ATACGTAAAAAGGACTTATA+TGG | + | chr7.4:29225335-29225354 | MS.gene52176:intron | 25.0% |
| ! | ATACTTGATTGTAAAAGGAT+AGG | - | chr7.4:29227749-29227768 | None:intergenic | 25.0% |
| ! | ATATAACACAAACAGAAAGT+AGG | + | chr7.4:29228633-29228652 | MS.gene52176:intron | 25.0% |
| ! | ATTCAGTTCTATATACTTGT+AGG | + | chr7.4:29229836-29229855 | MS.gene52176:intron | 25.0% |
| ! | CAAACAGATTAAATTATTGC+AGG | + | chr7.4:29227593-29227612 | MS.gene52176:intron | 25.0% |
| ! | CCAAACAATAAAACATAAAG+GGG | - | chr7.4:29225451-29225470 | None:intergenic | 25.0% |
| ! | CTGCAATAATTTAATCTGTT+TGG | - | chr7.4:29227595-29227614 | None:intergenic | 25.0% |
| ! | GAAATAGCTTATACGTAAAA+AGG | + | chr7.4:29225325-29225344 | MS.gene52176:intron | 25.0% |
| ! | GAAGTTATTTATATGGACTT+TGG | + | chr7.4:29225470-29225489 | MS.gene52176:intron | 25.0% |
| ! | GTCAAAAAGAGATATATTCT+TGG | - | chr7.4:29226465-29226484 | None:intergenic | 25.0% |
| ! | TAAAACGAAAAAGTCAAAAC+CGG | - | chr7.4:29225597-29225616 | None:intergenic | 25.0% |
| ! | TAGTCTACATTCAATATACA+AGG | - | chr7.4:29229470-29229489 | None:intergenic | 25.0% |
| ! | TATATTGAATGTAGACTAGT+TGG | + | chr7.4:29229472-29229491 | MS.gene52176:intron | 25.0% |
| ! | TCCAAACAATGATGATATAT+GGG | - | chr7.4:29226863-29226882 | None:intergenic | 25.0% |
| ! | TTAACAATGAATGCAAGATA+GGG | - | chr7.4:29226518-29226537 | None:intergenic | 25.0% |
| ! | TTCCAAACAATGATGATATA+TGG | - | chr7.4:29226864-29226883 | None:intergenic | 25.0% |
| ! | TTGAAAAATAGTTGCTTCAT+GGG | - | chr7.4:29228664-29228683 | None:intergenic | 25.0% |
| ! | TTGTGATACTTGATTGTAAA+AGG | - | chr7.4:29227754-29227773 | None:intergenic | 25.0% |
| ! | TTTACTTTCATTACCAGTAA+CGG | - | chr7.4:29228835-29228854 | None:intergenic | 25.0% |
| ! | TTTCAAAAGCTAAAACAAAC+AGG | - | chr7.4:29228435-29228454 | None:intergenic | 25.0% |
| ! | TTTCCAAATTTGTGATAAGT+TGG | + | chr7.4:29226168-29226187 | MS.gene52176:intron | 25.0% |
| !! | AAAATATTGCCACTTAGTTT+AGG | - | chr7.4:29227274-29227293 | None:intergenic | 25.0% |
| !! | AAGTATCACAAGTTTTCATA+TGG | + | chr7.4:29227763-29227782 | MS.gene52176:intron | 25.0% |
| !! | AATCTTTTCAATAACTTGAC+TGG | - | chr7.4:29227812-29227831 | None:intergenic | 25.0% |
| !! | ATCAAAAGGGTCTTATAATA+AGG | + | chr7.4:29229697-29229716 | MS.gene52176:intron | 25.0% |
| !! | ATTCATTTTCATGTTTGTCT+AGG | + | chr7.4:29228993-29229012 | MS.gene52176:intron | 25.0% |
| !! | ATTGCATTCAAAAGATCTTT+TGG | + | chr7.4:29226621-29226640 | MS.gene52176:intron | 25.0% |
| !! | CTAAAAGGGTCTTATAATAA+GGG | - | chr7.4:29229244-29229263 | None:intergenic | 25.0% |
| !! | GAATAAAAGCTTCTTTTCAA+TGG | + | chr7.4:29229077-29229096 | MS.gene52176:CDS | 25.0% |
| !! | GTTATGATTTTTCATTGCAT+AGG | + | chr7.4:29226192-29226211 | MS.gene52176:intron | 25.0% |
| !! | TAAGGGCATAAAATGAAAAT+AGG | - | chr7.4:29230011-29230030 | None:intergenic | 25.0% |
| !! | TACATATCAGTAGATTTTGT+GGG | + | chr7.4:29228950-29228969 | MS.gene52176:intron | 25.0% |
| !! | TCAAAAGGGTCTTATAATAA+GGG | + | chr7.4:29229698-29229717 | MS.gene52176:intron | 25.0% |
| !! | TCACGTTAATTTTCAGTAAT+GGG | - | chr7.4:29229442-29229461 | None:intergenic | 25.0% |
| !! | TCTAAAAGGGTCTTATAATA+AGG | - | chr7.4:29229245-29229264 | None:intergenic | 25.0% |
| !! | TTACATATCAGTAGATTTTG+TGG | + | chr7.4:29228949-29228968 | MS.gene52176:intron | 25.0% |
| !! | TTCACGTTAATTTTCAGTAA+TGG | - | chr7.4:29229443-29229462 | None:intergenic | 25.0% |
| !! | TTCTAAGTACTGTAAGTTAT+CGG | + | chr7.4:29229958-29229977 | MS.gene52176:intron | 25.0% |
| !!! | AGACCCTTTTAGAAAAAATA+CGG | + | chr7.4:29229252-29229271 | MS.gene52176:intron | 25.0% |
| !!! | ATATTTTAACCATGACGTTT+TGG | + | chr7.4:29227287-29227306 | MS.gene52176:intron | 25.0% |
| !!! | ATTTATTAGAGTATTGGTCA+AGG | - | chr7.4:29225818-29225837 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTGTCTGTCTACA+TGG | + | chr7.4:29226035-29226054 | MS.gene52176:intron | 25.0% |
| !!! | CTTATTTTCATAAGTTCTCT+AGG | + | chr7.4:29225222-29225241 | MS.gene52176:intron | 25.0% |
| !!! | CTTTTAACTTATATGAGAAC+TGG | + | chr7.4:29225269-29225288 | MS.gene52176:intron | 25.0% |
| !!! | GACTTTTTCGTTTTATTGTT+TGG | + | chr7.4:29225602-29225621 | MS.gene52176:intron | 25.0% |
| !!! | GGACAAGAATTTTTTCTAAA+AGG | + | chr7.4:29229719-29229738 | MS.gene52176:intron | 25.0% |
| !!! | GTATTGTTGTTTAGTAGTTT+AGG | - | chr7.4:29226940-29226959 | None:intergenic | 25.0% |
| !!! | TAGTAGTGGGTAATTAATAT+AGG | - | chr7.4:29229376-29229395 | None:intergenic | 25.0% |
| !!! | TTACAGTTTGTTTTAGATTC+TGG | - | chr7.4:29228548-29228567 | None:intergenic | 25.0% |
| !!! | TTGCTTTTTGGTGTATTTTT+TGG | + | chr7.4:29225026-29225045 | MS.gene52176:intron | 25.0% |
| AAACAAACTGTAAAGTGAAG+TGG | + | chr7.4:29228555-29228574 | MS.gene52176:intron | 30.0% | |
| AAGAACAGCAATAAGTTTAG+TGG | - | chr7.4:29229583-29229602 | None:intergenic | 30.0% | |
| AATGCAGGAGATATAGTTAT+TGG | + | chr7.4:29228919-29228938 | MS.gene52176:intron | 30.0% | |
| AATTATTAGAAGGGCAAACA+TGG | - | chr7.4:29229332-29229351 | None:intergenic | 30.0% | |
| ACAGATTAAATTATTGCAGG+AGG | + | chr7.4:29227596-29227615 | MS.gene52176:intron | 30.0% | |
| ACTCCAACTTATCACAAATT+TGG | - | chr7.4:29226174-29226193 | None:intergenic | 30.0% | |
| AGAACAGCAATAAGTTTAGT+GGG | - | chr7.4:29229582-29229601 | None:intergenic | 30.0% | |
| AGATCCTGAGTACAAATTTA+AGG | + | chr7.4:29228044-29228063 | MS.gene52176:intron | 30.0% | |
| AGATTCTGGTGAAAACAAAA+TGG | - | chr7.4:29228534-29228553 | None:intergenic | 30.0% | |
| AGCCAAAATTTAAAGAGCTA+TGG | - | chr7.4:29226664-29226683 | None:intergenic | 30.0% | |
| ATCAAATTACTACTCCCAAT+GGG | + | chr7.4:29227436-29227455 | MS.gene52176:CDS | 30.0% | |
| ATTATCCTAAAAGAATCGCA+GGG | - | chr7.4:29228218-29228237 | None:intergenic | 30.0% | |
| ATTCTGGTGAAAACAAAATG+GGG | - | chr7.4:29228532-29228551 | None:intergenic | 30.0% | |
| CAAATGAAATTCAGTGAGTA+AGG | - | chr7.4:29230029-29230048 | None:intergenic | 30.0% | |
| CAAGTTATTCAAGTAGTAGT+GGG | - | chr7.4:29229389-29229408 | None:intergenic | 30.0% | |
| CAGTAATTAATGCACACAAT+CGG | - | chr7.4:29229195-29229214 | None:intergenic | 30.0% | |
| CTGTTATTACATTAAGACCA+TGG | - | chr7.4:29227565-29227584 | None:intergenic | 30.0% | |
| CTTAACAATGAATGCAAGAT+AGG | - | chr7.4:29226519-29226538 | None:intergenic | 30.0% | |
| CTTATCAACAAAAACACTAC+AGG | - | chr7.4:29226312-29226331 | None:intergenic | 30.0% | |
| CTTGAAAAATAGTTGCTTCA+TGG | - | chr7.4:29228665-29228684 | None:intergenic | 30.0% | |
| CTTGTCACTCTTACAAAATA+TGG | + | chr7.4:29227044-29227063 | MS.gene52176:intron | 30.0% | |
| GATAATCCAATATATGCAAG+AGG | + | chr7.4:29228232-29228251 | MS.gene52176:intron | 30.0% | |
| GATTCTGGTGAAAACAAAAT+GGG | - | chr7.4:29228533-29228552 | None:intergenic | 30.0% | |
| TAAAGCTTCTTCTATCTCAA+GGG | - | chr7.4:29229925-29229944 | None:intergenic | 30.0% | |
| TAAGACCATGGACATTAAAA+AGG | - | chr7.4:29227553-29227572 | None:intergenic | 30.0% | |
| TATAGGCAAATGTTAGTTGT+TGG | + | chr7.4:29228693-29228712 | MS.gene52176:intron | 30.0% | |
| TCAAGTTATTCAAGTAGTAG+TGG | - | chr7.4:29229390-29229409 | None:intergenic | 30.0% | |
| TCCCATATATCATCATTGTT+TGG | + | chr7.4:29226859-29226878 | MS.gene52176:CDS | 30.0% | |
| TGGTTCAAACTATCAATAAC+TGG | - | chr7.4:29226445-29226464 | None:intergenic | 30.0% | |
| TGTGTTATATCTCACATATG+CGG | - | chr7.4:29228623-29228642 | None:intergenic | 30.0% | |
| ! | AAAAAGTCAAAACCGGATTT+TGG | - | chr7.4:29225590-29225609 | None:intergenic | 30.0% |
| ! | ACATCTGTACTGATATAGAA+AGG | - | chr7.4:29227415-29227434 | None:intergenic | 30.0% |
| ! | AGTAAAAAAGTGCATGTACT+GGG | + | chr7.4:29228496-29228515 | MS.gene52176:intron | 30.0% |
| ! | CAGTTTTACAAAATCATCCA+AGG | - | chr7.4:29230130-29230149 | None:intergenic | 30.0% |
| ! | CTCCATAGCTCTTTAAATTT+TGG | + | chr7.4:29226659-29226678 | MS.gene52176:intron | 30.0% |
| ! | GCTGTCAAATGACTTTATTT+AGG | - | chr7.4:29227237-29227256 | None:intergenic | 30.0% |
| ! | TAGCAAAATTAATTTGGCAG+AGG | - | chr7.4:29227319-29227338 | None:intergenic | 30.0% |
| ! | TATCTTTGTTTAGAGTAGCT+TGG | - | chr7.4:29229789-29229808 | None:intergenic | 30.0% |
| ! | TATTTTGTAAGAGTGACAAG+TGG | - | chr7.4:29227044-29227063 | None:intergenic | 30.0% |
| ! | TTGAAGTGTTACAACACAAT+GGG | - | chr7.4:29224990-29225009 | None:intergenic | 30.0% |
| ! | TTTGAAGTGTTACAACACAA+TGG | - | chr7.4:29224991-29225010 | None:intergenic | 30.0% |
| !! | AGCCAACACTTTCTAAAATT+TGG | - | chr7.4:29226982-29227001 | None:intergenic | 30.0% |
| !! | CCCCTTTATGTTTTATTGTT+TGG | + | chr7.4:29225448-29225467 | MS.gene52176:intron | 30.0% |
| !! | TGCCAAATTTTAGAAAGTGT+TGG | + | chr7.4:29226977-29226996 | MS.gene52176:intron | 30.0% |
| !!! | ATTTTGGCTCATTATATTGC+TGG | + | chr7.4:29226675-29226694 | MS.gene52176:intron | 30.0% |
| !!! | TACATGCACTTTTTTACTGA+GGG | - | chr7.4:29228494-29228513 | None:intergenic | 30.0% |
| AAAAAAGTGAAAGCCGTTAC+TGG | + | chr7.4:29228819-29228838 | MS.gene52176:intron | 35.0% | |
| AAATTCTGGTGCATTTGTTC+TGG | + | chr7.4:29225834-29225853 | MS.gene52176:CDS | 35.0% | |
| AATATTATTGGTCGCAGTGT+AGG | + | chr7.4:29226135-29226154 | MS.gene52176:intron | 35.0% | |
| AGAGCTATGGAGAAATTACA+AGG | - | chr7.4:29226651-29226670 | None:intergenic | 35.0% | |
| ATAACTTACTAAGAAGCCAC+AGG | - | chr7.4:29227935-29227954 | None:intergenic | 35.0% | |
| ATATCACTTACATTAGGCTG+AGG | - | chr7.4:29228090-29228109 | None:intergenic | 35.0% | |
| ATGGTGAATCAATTCTAACC+TGG | - | chr7.4:29227492-29227511 | None:intergenic | 35.0% | |
| ATTGCTTCAGGACTTCATTT+GGG | + | chr7.4:29225642-29225661 | MS.gene52176:intron | 35.0% | |
| ATTGTTAAGAGTCAGAAGTC+AGG | + | chr7.4:29226530-29226549 | MS.gene52176:intron | 35.0% | |
| CATTGCATAGGATAAACACA+TGG | + | chr7.4:29226204-29226223 | MS.gene52176:intron | 35.0% | |
| CGATTGTGTGCATTAATTAC+TGG | + | chr7.4:29229193-29229212 | MS.gene52176:intron | 35.0% | |
| CTAAAAGGGTCCTATAACAA+GGG | + | chr7.4:29229734-29229753 | MS.gene52176:intron | 35.0% | |
| CTAAAGCTTCTTCTATCTCA+AGG | - | chr7.4:29229926-29229945 | None:intergenic | 35.0% | |
| CTATGCATGACAATGTATGA+CGG | - | chr7.4:29229117-29229136 | None:intergenic | 35.0% | |
| CTTCAGTTTGAATGAGACAA+CGG | - | chr7.4:29229028-29229047 | None:intergenic | 35.0% | |
| GACATAAATGAGCAACTTGT+TGG | + | chr7.4:29225736-29225755 | MS.gene52176:CDS | 35.0% | |
| GACTATATAATCCTTTCCTG+TGG | + | chr7.4:29227916-29227935 | MS.gene52176:intron | 35.0% | |
| GATATGCGCTTGAATGATAT+TGG | + | chr7.4:29228116-29228135 | MS.gene52176:intron | 35.0% | |
| GATATTCGTTACGCCAAATT+TGG | + | chr7.4:29227987-29228006 | MS.gene52176:intron | 35.0% | |
| GATCAAATTACTACTCCCAA+TGG | + | chr7.4:29227435-29227454 | MS.gene52176:CDS | 35.0% | |
| GATTATCCTAAAAGAATCGC+AGG | - | chr7.4:29228219-29228238 | None:intergenic | 35.0% | |
| GGAACTATGGTGAATGTAAT+GGG | + | chr7.4:29227099-29227118 | MS.gene52176:intron | 35.0% | |
| GTTGTACATGTTTGCATCTT+TGG | + | chr7.4:29226067-29226086 | MS.gene52176:intron | 35.0% | |
| TAGGTTTATGCTGTTGAGTA+TGG | - | chr7.4:29227218-29227237 | None:intergenic | 35.0% | |
| TATCACTTACATTAGGCTGA+GGG | - | chr7.4:29228089-29228108 | None:intergenic | 35.0% | |
| TCAAGAAAGCGAAAAACTTG+TGG | + | chr7.4:29228352-29228371 | MS.gene52176:intron | 35.0% | |
| TCTAAAAGGGTCCTATAACA+AGG | + | chr7.4:29229733-29229752 | MS.gene52176:intron | 35.0% | |
| TCTATGCCTCTTGCATATAT+TGG | - | chr7.4:29228241-29228260 | None:intergenic | 35.0% | |
| TCTTGAAACGAAGTTTCAGA+TGG | - | chr7.4:29228338-29228357 | None:intergenic | 35.0% | |
| TGCAAACAACATACCATTTC+AGG | - | chr7.4:29227376-29227395 | None:intergenic | 35.0% | |
| TTCAAGTGTCCTAAACTAAG+TGG | + | chr7.4:29227262-29227281 | MS.gene52176:intron | 35.0% | |
| ! | AAGGGTCTTATAATAAGGGA+CGG | - | chr7.4:29229721-29229702 | None:intergenic | 35.0% |
| ! | AGCTTTTATTCGACGAAACT+TGG | - | chr7.4:29229068-29229087 | None:intergenic | 35.0% |
| ! | AGTGAAAGATTTTCCAGTAC+AGG | + | chr7.4:29226238-29226257 | MS.gene52176:CDS | 35.0% |
| ! | ATCATTGTTTGGAAGCACAA+AGG | + | chr7.4:29226870-29226889 | MS.gene52176:CDS | 35.0% |
| ! | CAGTAAAAAAGTGCATGTAC+TGG | + | chr7.4:29228495-29228514 | MS.gene52176:intron | 35.0% |
| ! | CCTGCAAGCATTTTATCAAA+AGG | - | chr7.4:29226804-29226823 | None:intergenic | 35.0% |
| ! | CCTTTTGATAAAATGCTTGC+AGG | + | chr7.4:29226801-29226820 | MS.gene52176:intron | 35.0% |
| ! | CGTTTTATCAAACATGTGGT+GGG | + | chr7.4:29225062-29225081 | MS.gene52176:intron | 35.0% |
| ! | CTATATCTCCTGCATTTTTC+AGG | - | chr7.4:29228915-29228934 | None:intergenic | 35.0% |
| ! | CTTTTATTCGACGAAACTTG+GGG | - | chr7.4:29229066-29229085 | None:intergenic | 35.0% |
| ! | GCTTTTATTCGACGAAACTT+GGG | - | chr7.4:29229067-29229086 | None:intergenic | 35.0% |
| ! | GGAGTGTTTGAAGATAACAT+AGG | - | chr7.4:29224745-29224764 | None:intergenic | 35.0% |
| ! | GTTTTGTACTTAGGACTGTT+TGG | + | chr7.4:29225093-29225112 | MS.gene52176:intron | 35.0% |
| ! | TCTGTTGCGACATGAATTTT+GGG | + | chr7.4:29225554-29225573 | MS.gene52176:intron | 35.0% |
| ! | TGAAATGGTATGTTGTTTGC+AGG | + | chr7.4:29227375-29227394 | MS.gene52176:intron | 35.0% |
| ! | TTGTTTGGAGATGATTTTGC+TGG | + | chr7.4:29225617-29225636 | MS.gene52176:intron | 35.0% |
| ! | TTTGGTGGGCATAAATGAAT+CGG | + | chr7.4:29227159-29227178 | MS.gene52176:intron | 35.0% |
| !! | AAGTGTTGGCTACTTGATAA+AGG | + | chr7.4:29226991-29227010 | MS.gene52176:intron | 35.0% |
| !! | ACTTGTTGTCAATCCTGAAA+TGG | + | chr7.4:29227360-29227379 | MS.gene52176:intron | 35.0% |
| !! | ATGGTGAATGTAATGGGTAT+TGG | + | chr7.4:29227105-29227124 | MS.gene52176:intron | 35.0% |
| !! | GAAGAAGCTTTAGAAAGCAT+AGG | + | chr7.4:29229933-29229952 | MS.gene52176:CDS | 35.0% |
| !! | TGGTGAATGTAATGGGTATT+GGG | + | chr7.4:29227106-29227125 | MS.gene52176:intron | 35.0% |
| !!! | ACCTGACCAAGAGATTTTTT+GGG | - | chr7.4:29224950-29224969 | None:intergenic | 35.0% |
| !!! | CATGTTTGCAAGTGCTTTTT+TGG | + | chr7.4:29225991-29226010 | MS.gene52176:intron | 35.0% |
| !!! | GTACATGCACTTTTTTACTG+AGG | - | chr7.4:29228495-29228514 | None:intergenic | 35.0% |
| !!! | TATTTTTTGGTTGCTCTGTG+AGG | + | chr7.4:29225039-29225058 | MS.gene52176:intron | 35.0% |
| AACTGCATTTACTACTGTGC+AGG | + | chr7.4:29226553-29226572 | MS.gene52176:intron | 40.0% | |
| AAGGTTGCGTTGTGAGATAT+TGG | - | chr7.4:29224770-29224789 | None:intergenic | 40.0% | |
| ACAAGTGGAGCTGAATGTTA+GGG | - | chr7.4:29227029-29227048 | None:intergenic | 40.0% | |
| AGATCCCCCAAAAAATCTCT+TGG | + | chr7.4:29224941-29224960 | MS.gene52176:CDS | 40.0% | |
| AGCGAAAAACTTGTGGCTTT+CGG | + | chr7.4:29228359-29228378 | MS.gene52176:intron | 40.0% | |
| AGGATCTGTAAAAGAGAGTC+AGG | - | chr7.4:29228031-29228050 | None:intergenic | 40.0% | |
| AGTAGACATGGTTTGAACTC+TGG | + | chr7.4:29228727-29228746 | MS.gene52176:intron | 40.0% | |
| ATATTGATGGGACGATACTC+AGG | - | chr7.4:29227660-29227679 | None:intergenic | 40.0% | |
| ATTTGTTCTGGCGGTTGAAA+AGG | + | chr7.4:29225846-29225865 | MS.gene52176:CDS | 40.0% | |
| CATTGCTTCAGGACTTCATT+TGG | + | chr7.4:29225641-29225660 | MS.gene52176:intron | 40.0% | |
| CATTTATGCCCACCAAACAA+AGG | - | chr7.4:29227156-29227175 | None:intergenic | 40.0% | |
| CGAAAATTCTACGTAGCTTG+CGG | + | chr7.4:29224842-29224861 | MS.gene52176:CDS | 40.0% | |
| CTATACACGCAAAGTGGAAA+CGG | - | chr7.4:29227074-29227093 | None:intergenic | 40.0% | |
| CTGAGAAAATGTCACCCATT+GGG | - | chr7.4:29227453-29227472 | None:intergenic | 40.0% | |
| GAAACTTGGGGATATTCTGA+TGG | - | chr7.4:29229054-29229073 | None:intergenic | 40.0% | |
| GACCATGGACATTAAAAAGG+AGG | - | chr7.4:29227550-29227569 | None:intergenic | 40.0% | |
| GCATGGTAATCGTCTTTGTT+TGG | - | chr7.4:29224893-29224912 | None:intergenic | 40.0% | |
| GCGACCTTAAATTTGTACTC+AGG | - | chr7.4:29228051-29228070 | None:intergenic | 40.0% | |
| GCTTTCAATGACTCGTTCTT+TGG | + | chr7.4:29225930-29225949 | MS.gene52176:intron | 40.0% | |
| GGAAAATCTTTCACTCACGA+GGG | - | chr7.4:29226233-29226252 | None:intergenic | 40.0% | |
| GGCTCATGAAAAACTTGCAT+TGG | + | chr7.4:29228576-29228595 | MS.gene52176:intron | 40.0% | |
| GGGAACTATGGTGAATGTAA+TGG | + | chr7.4:29227098-29227117 | MS.gene52176:intron | 40.0% | |
| GGGTTTAGCATTCCAAAATC+CGG | + | chr7.4:29225575-29225594 | MS.gene52176:intron | 40.0% | |
| GTGATGGCAATCATGATTCA+AGG | + | chr7.4:29227856-29227875 | MS.gene52176:intron | 40.0% | |
| GTGTGTTATGTCAGTAGACA+TGG | + | chr7.4:29228715-29228734 | MS.gene52176:intron | 40.0% | |
| TAACTGTGCGTAATCTGTGA+TGG | + | chr7.4:29227840-29227859 | MS.gene52176:intron | 40.0% | |
| TACCTTCAACTTTCCTGTAC+TGG | - | chr7.4:29226254-29226273 | None:intergenic | 40.0% | |
| TATATCTCACATATGCGGCA+CGG | - | chr7.4:29228618-29228637 | None:intergenic | 40.0% | |
| TATTGATGGGACGATACTCA+GGG | - | chr7.4:29227659-29227678 | None:intergenic | 40.0% | |
| TCTGAGAAAATGTCACCCAT+TGG | - | chr7.4:29227454-29227473 | None:intergenic | 40.0% | |
| TCTTCTGATGTTTGCAGTCA+AGG | + | chr7.4:29230091-29230110 | MS.gene52176:intron | 40.0% | |
| TGGAAAATCTTTCACTCACG+AGG | - | chr7.4:29226234-29226253 | None:intergenic | 40.0% | |
| TGGCTCATTATATTGCTGGA+TGG | + | chr7.4:29226679-29226698 | MS.gene52176:intron | 40.0% | |
| TGTCATGCATAGAGTTTCTG+AGG | + | chr7.4:29229125-29229144 | MS.gene52176:intron | 40.0% | |
| TTACTAAGAAGCCACAGGAA+AGG | - | chr7.4:29227930-29227949 | None:intergenic | 40.0% | |
| TTCCAGTACAGGAAAGTTGA+AGG | + | chr7.4:29226249-29226268 | MS.gene52176:CDS | 40.0% | |
| TTGACATGCACTGTATGCTT+AGG | + | chr7.4:29226480-29226499 | MS.gene52176:intron | 40.0% | |
| TTGCTTCAGGACTTCATTTG+GGG | + | chr7.4:29225643-29225662 | MS.gene52176:intron | 40.0% | |
| TTTGGTTGCATACTTCGTTG+AGG | + | chr7.4:29225488-29225507 | MS.gene52176:intron | 40.0% | |
| ! | AACGAGTCATTGAAAGCATG+AGG | - | chr7.4:29225927-29225946 | None:intergenic | 40.0% |
| ! | AATGGTATGTTGTTTGCAGG+TGG | + | chr7.4:29227378-29227397 | MS.gene52176:intron | 40.0% |
| ! | ACGAGTCATTGAAAGCATGA+GGG | - | chr7.4:29225926-29225945 | None:intergenic | 40.0% |
| ! | AGTTTGGACCTTTGTTTGGT+GGG | + | chr7.4:29227145-29227164 | MS.gene52176:intron | 40.0% |
| ! | ATTTTGCTGGACATTGCTTC+AGG | + | chr7.4:29225630-29225649 | MS.gene52176:intron | 40.0% |
| ! | CTACGTAGAATTTTCGACTC+CGG | - | chr7.4:29224838-29224857 | None:intergenic | 40.0% |
| ! | CTCTGTTGCGACATGAATTT+TGG | + | chr7.4:29225553-29225572 | MS.gene52176:intron | 40.0% |
| ! | CTGTTGCGACATGAATTTTG+GGG | + | chr7.4:29225555-29225574 | MS.gene52176:intron | 40.0% |
| ! | GACAATGTATGACGGAGAAA+GGG | - | chr7.4:29229109-29229128 | None:intergenic | 40.0% |
| ! | GCGTTTTATCAAACATGTGG+TGG | + | chr7.4:29225061-29225080 | MS.gene52176:intron | 40.0% |
| ! | TAGTTTGGACCTTTGTTTGG+TGG | + | chr7.4:29227144-29227163 | MS.gene52176:intron | 40.0% |
| ! | TCAACTGCTGTTGGTTAGTT+TGG | + | chr7.4:29227129-29227148 | MS.gene52176:intron | 40.0% |
| ! | TCATCCAAGGTTAGTTCTTC+AGG | - | chr7.4:29230117-29230136 | None:intergenic | 40.0% |
| ! | TGACAATGTATGACGGAGAA+AGG | - | chr7.4:29229110-29229129 | None:intergenic | 40.0% |
| ! | TGTTGGCTACTTGATAAAGG+AGG | + | chr7.4:29226994-29227013 | MS.gene52176:intron | 40.0% |
| !! | ACTGGCTTGTGGGTTATTAT+TGG | - | chr7.4:29227193-29227212 | None:intergenic | 40.0% |
| !! | GAGGCGTTTTATCAAACATG+TGG | + | chr7.4:29225058-29225077 | MS.gene52176:intron | 40.0% |
| !! | GGTTAGTTTGGACCTTTGTT+TGG | + | chr7.4:29227141-29227160 | MS.gene52176:intron | 40.0% |
| !!! | ATGCTTGCAGGTTTTGAATG+AGG | + | chr7.4:29226813-29226832 | MS.gene52176:intron | 40.0% |
| !!! | CACCTGACCAAGAGATTTTT+TGG | - | chr7.4:29224951-29224970 | None:intergenic | 40.0% |
| !!! | CCTGACCAAGAGATTTTTTG+GGG | - | chr7.4:29224949-29224968 | None:intergenic | 40.0% |
| !!! | CTGACCAAGAGATTTTTTGG+GGG | - | chr7.4:29224948-29224967 | None:intergenic | 40.0% |
| !!! | GCGTGTGTTGTTTTGTACTT+AGG | + | chr7.4:29225084-29225103 | MS.gene52176:intron | 40.0% |
| AAGGAAGAAGGAATGTCAGC+AGG | + | chr7.4:29228888-29228907 | MS.gene52176:intron | 45.0% | |
| AAGGCCTGAAGAACTAACCT+TGG | + | chr7.4:29230110-29230129 | MS.gene52176:CDS | 45.0% | |
| AAGGGTCCTATAACAAGGGA+CGG | + | chr7.4:29229738-29229757 | MS.gene52176:intron | 45.0% | |
| AATCTCTTGGTCAGGTGAGA+AGG | + | chr7.4:29224954-29224973 | MS.gene52176:intron | 45.0% | |
| ATGCTGTTGAGTATGGTCAC+TGG | - | chr7.4:29227211-29227230 | None:intergenic | 45.0% | |
| ATTGATGGGACGATACTCAG+GGG | - | chr7.4:29227658-29227677 | None:intergenic | 45.0% | |
| CAAGTGGAGCTGAATGTTAG+GGG | - | chr7.4:29227028-29227047 | None:intergenic | 45.0% | |
| CAAGTTACGTCTCGAGAGTA+AGG | + | chr7.4:29226335-29226354 | MS.gene52176:intron | 45.0% | |
| CACTTTGCGTGTATAGCAGA+GGG | + | chr7.4:29227078-29227097 | MS.gene52176:intron | 45.0% | |
| CCCCAAAAAATCTCTTGGTC+AGG | + | chr7.4:29224946-29224965 | MS.gene52176:CDS | 45.0% | |
| CTCAAAGCTCTCAACTCCAA+AGG | + | chr7.4:29224917-29224936 | MS.gene52176:CDS | 45.0% | |
| GACAAGTGGAGCTGAATGTT+AGG | - | chr7.4:29227030-29227049 | None:intergenic | 45.0% | |
| GTAGCTCGAGTGGTTTAACT+GGG | - | chr7.4:29228779-29228798 | None:intergenic | 45.0% | |
| GTGTATAGCAGAGGGAACTA+TGG | + | chr7.4:29227086-29227105 | MS.gene52176:intron | 45.0% | |
| GTTGCGTTGTGAGATATTGG+CGG | - | chr7.4:29224767-29224786 | None:intergenic | 45.0% | |
| TGCTTCAGGACTTCATTTGG+GGG | + | chr7.4:29225644-29225663 | MS.gene52176:intron | 45.0% | |
| TTCTGGTGCATTTGTTCTGG+CGG | + | chr7.4:29225837-29225856 | MS.gene52176:CDS | 45.0% | |
| TTGCGTTGTGAGATATTGGC+GGG | - | chr7.4:29224766-29224785 | None:intergenic | 45.0% | |
| ! | ACAGTTTTGCTAGCTGAGGT+GGG | + | chr7.4:29226406-29226425 | MS.gene52176:intron | 45.0% |
| ! | AGGCATTTTTATCGAGCGCA+GGG | + | chr7.4:29225508-29225527 | MS.gene52176:intron | 45.0% |
| ! | ATGTATGACGGAGAAAGGGA+AGG | - | chr7.4:29229105-29229124 | None:intergenic | 45.0% |
| ! | GGAGTGCTACAGTACAAGTT+TGG | - | chr7.4:29225405-29225424 | None:intergenic | 45.0% |
| ! | GGCCTCCTTTTTAATGTCCA+TGG | + | chr7.4:29227545-29227564 | MS.gene52176:intron | 45.0% |
| ! | GGGTGACATTTTCTCAGAAG+TGG | + | chr7.4:29227456-29227475 | MS.gene52176:CDS | 45.0% |
| ! | GGTCTTATAATAAGGGACGG+AGG | - | chr7.4:29229237-29229256 | None:intergenic | 45.0% |
| ! | GTGATGTGGTGCTGGAAATT+GGG | + | chr7.4:29225779-29225798 | MS.gene52176:CDS | 45.0% |
| ! | TACAGTTTTGCTAGCTGAGG+TGG | + | chr7.4:29226405-29226424 | MS.gene52176:intron | 45.0% |
| ! | TGCTACAGTTTTGCTAGCTG+AGG | + | chr7.4:29226402-29226421 | MS.gene52176:intron | 45.0% |
| !! | AAATGAGCAACTTGTTGGCG+TGG | + | chr7.4:29225741-29225760 | MS.gene52176:CDS | 45.0% |
| !! | AGGAAAGCACCAAAACGTCA+TGG | - | chr7.4:29227299-29227318 | None:intergenic | 45.0% |
| !! | TCGAAGCTCTGTTGTTTCCA+CGG | - | chr7.4:29224868-29224887 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGTTTGTTGGTGG+GGG | + | chr7.4:29225527-29225546 | MS.gene52176:intron | 45.0% |
| !!! | CAGGGTTTTGTTTGTTGGTG+GGG | + | chr7.4:29225526-29225545 | MS.gene52176:intron | 45.0% |
| !!! | GCAGGGTTTTGTTTGTTGGT+GGG | + | chr7.4:29225525-29225544 | MS.gene52176:intron | 45.0% |
| !!! | TTTTTTGGGGGATCTGCCTT+TGG | - | chr7.4:29224936-29224955 | None:intergenic | 45.0% |
| AAACCACTCGAGCTACGCTT+CGG | + | chr7.4:29228783-29228802 | MS.gene52176:intron | 50.0% | |
| AAGAGTCAGACACGTGACAC+AGG | - | chr7.4:29226722-29226741 | None:intergenic | 50.0% | |
| AGAAGTGGTTCTCTTGCTCC+AGG | + | chr7.4:29227471-29227490 | MS.gene52176:CDS | 50.0% | |
| CAGCAGGTCCTGAAAAATGC+AGG | + | chr7.4:29228904-29228923 | MS.gene52176:intron | 50.0% | |
| CCACTTTGCGTGTATAGCAG+AGG | + | chr7.4:29227077-29227096 | MS.gene52176:intron | 50.0% | |
| CCTCTGCTATACACGCAAAG+TGG | - | chr7.4:29227080-29227099 | None:intergenic | 50.0% | |
| CGTAGCTCGAGTGGTTTAAC+TGG | - | chr7.4:29228780-29228799 | None:intergenic | 50.0% | |
| TTGGTCAAGGAACCAGTTCC+TGG | - | chr7.4:29225805-29225824 | None:intergenic | 50.0% | |
| ! | CTACCTCCGTCCCTTGTTAT+AGG | - | chr7.4:29229747-29229766 | None:intergenic | 50.0% |
| ! | GCTCTCCCTGCGATTCTTTT+AGG | + | chr7.4:29228210-29228229 | MS.gene52176:intron | 50.0% |
| ! | GGTATTGGGTCAACTGCTGT+TGG | + | chr7.4:29227120-29227139 | MS.gene52176:intron | 50.0% |
| ! | GGTGATGTGGTGCTGGAAAT+TGG | + | chr7.4:29225778-29225797 | MS.gene52176:CDS | 50.0% |
| !! | GAGGCATTTTTATCGAGCGC+AGG | + | chr7.4:29225507-29225526 | MS.gene52176:intron | 50.0% |
| !! | GAGTATGGTCACTGGCTTGT+GGG | - | chr7.4:29227203-29227222 | None:intergenic | 50.0% |
| !! | GGACTTCATTTGGGGGTGTT+TGG | + | chr7.4:29225651-29225670 | MS.gene52176:intron | 50.0% |
| !! | GGAGTTGAGAGCTTTGAGAG+TGG | - | chr7.4:29224915-29224934 | None:intergenic | 50.0% |
| !! | TGAGAGCTTTGAGAGTGGCA+TGG | - | chr7.4:29224910-29224929 | None:intergenic | 50.0% |
| !! | TGAGTATGGTCACTGGCTTG+TGG | - | chr7.4:29227204-29227223 | None:intergenic | 50.0% |
| !!! | CGCAGGGTTTTGTTTGTTGG+TGG | + | chr7.4:29225524-29225543 | MS.gene52176:intron | 50.0% |
| !!! | GAGCGCAGGGTTTTGTTTGT+TGG | + | chr7.4:29225521-29225540 | MS.gene52176:intron | 50.0% |
| !!! | GGGTTTTGTTTGTTGGTGGG+GGG | + | chr7.4:29225528-29225547 | MS.gene52176:intron | 50.0% |
| ACCTCCCACTCAAACTCCTC+GGG | + | chr7.4:29228750-29228769 | MS.gene52176:intron | 55.0% | |
| CAGACACGTGACACAGGCAT+TGG | - | chr7.4:29226716-29226735 | None:intergenic | 55.0% | |
| CTGGAAATTGGGCCAGGAAC+TGG | + | chr7.4:29225790-29225809 | MS.gene52176:CDS | 55.0% | |
| GAAATCCTACCGGCGACAAC+CGG | + | chr7.4:29224816-29224835 | MS.gene52176:CDS | 55.0% | |
| GACACCCGAGGAGTTTGAGT+GGG | - | chr7.4:29228757-29228776 | None:intergenic | 55.0% | |
| GACCTCCCACTCAAACTCCT+CGG | + | chr7.4:29228749-29228768 | MS.gene52176:intron | 55.0% | |
| GATTTCGCGGCAGTGGTTTG+TGG | - | chr7.4:29224802-29224821 | None:intergenic | 55.0% | |
| GGTCCTATAACAAGGGACGG+AGG | + | chr7.4:29229741-29229760 | MS.gene52176:intron | 55.0% | |
| TGGTTTAACTGGGACACCCG+AGG | - | chr7.4:29228769-29228788 | None:intergenic | 55.0% | |
| TTGTCGCCGGTAGGATTTCG+CGG | - | chr7.4:29224815-29224834 | None:intergenic | 55.0% | |
| ! | TGGTGTCGAGGAAGGTGATG+TGG | + | chr7.4:29225765-29225784 | MS.gene52176:CDS | 55.0% |
| ! | TGGTTTGTGGCGGGAGTTGA+AGG | - | chr7.4:29224789-29224808 | None:intergenic | 55.0% |
| ! | TTTTCGACTCCGGTTGTCGC+CGG | - | chr7.4:29224828-29224847 | None:intergenic | 55.0% |
| ACCCGAGGAGTTTGAGTGGG+AGG | - | chr7.4:29228754-29228773 | None:intergenic | 60.0% | |
| CCACTGCCGCGAAATCCTAC+CGG | + | chr7.4:29224806-29224825 | MS.gene52176:CDS | 60.0% | |
| CGAGGAAGGTGATGTGGTGC+TGG | + | chr7.4:29225771-29225790 | MS.gene52176:CDS | 60.0% | |
| GCTGGGTAGAACCATCGCTC+CGG | + | chr7.4:29227631-29227650 | MS.gene52176:CDS | 60.0% | |
| GGACACCCGAGGAGTTTGAG+TGG | - | chr7.4:29228758-29228777 | None:intergenic | 60.0% | |
| GTACCGAAGCGTAGCTCGAG+TGG | - | chr7.4:29228789-29228808 | None:intergenic | 60.0% | |
| TGGGACGATACTCAGGGGTC+CGG | - | chr7.4:29227653-29227672 | None:intergenic | 60.0% | |
| ! | GTGGTGCTGGAAATTGGGCC+AGG | + | chr7.4:29225784-29225803 | MS.gene52176:CDS | 60.0% |
| ! | TTCGCGGCAGTGGTTTGTGG+CGG | - | chr7.4:29224799-29224818 | None:intergenic | 60.0% |
| ! | TTCTACGTAGCTTGCGGCCG+TGG | + | chr7.4:29224848-29224867 | MS.gene52176:CDS | 60.0% |
| !! | GAGCAACTTGTTGGCGTGGC+TGG | + | chr7.4:29225745-29225764 | MS.gene52176:CDS | 60.0% |
| AGGAGGAGACTGCTCTGCGC+TGG | + | chr7.4:29227613-29227632 | MS.gene52176:intron | 65.0% | |
| CCGGTAGGATTTCGCGGCAG+TGG | - | chr7.4:29224809-29224828 | None:intergenic | 65.0% | |
| GGAGGAGACTGCTCTGCGCT+GGG | + | chr7.4:29227614-29227633 | MS.gene52176:intron | 65.0% | |
| TACTCAGGGGTCCGGAGCGA+TGG | - | chr7.4:29227645-29227664 | None:intergenic | 65.0% | |
| ! | TCGCGGCAGTGGTTTGTGGC+GGG | - | chr7.4:29224798-29224817 | None:intergenic | 65.0% |
| ! | TGTTGGCGTGGCTGGTGTCG+AGG | + | chr7.4:29225753-29225772 | MS.gene52176:CDS | 65.0% |
| CGACTCCGGTTGTCGCCGGT+AGG | - | chr7.4:29224824-29224843 | None:intergenic | 70.0% | |
| ! | GGCGTGGCTGGTGTCGAGGA+AGG | + | chr7.4:29225757-29225776 | MS.gene52176:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 29224722 | 29230173 | 29224722 | ID=MS.gene52176 |
| chr7.4 | mRNA | 29224722 | 29230173 | 29224722 | ID=MS.gene52176.t1;Parent=MS.gene52176 |
| chr7.4 | exon | 29224722 | 29224967 | 29224722 | ID=MS.gene52176.t1.exon1;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29224722 | 29224967 | 29224722 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29225718 | 29225867 | 29225718 | ID=MS.gene52176.t1.exon2;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29225718 | 29225867 | 29225718 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29226214 | 29226270 | 29226214 | ID=MS.gene52176.t1.exon3;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29226214 | 29226270 | 29226214 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29226823 | 29226921 | 29226823 | ID=MS.gene52176.t1.exon4;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29226823 | 29226921 | 29226823 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29227397 | 29227492 | 29227397 | ID=MS.gene52176.t1.exon5;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29227397 | 29227492 | 29227397 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29227615 | 29227699 | 29227615 | ID=MS.gene52176.t1.exon6;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29227615 | 29227699 | 29227615 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29228046 | 29228098 | 29228046 | ID=MS.gene52176.t1.exon7;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29228046 | 29228098 | 29228046 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29229015 | 29229098 | 29229015 | ID=MS.gene52176.t1.exon8;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29229015 | 29229098 | 29229015 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29229858 | 29229968 | 29229858 | ID=MS.gene52176.t1.exon9;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29229858 | 29229968 | 29229858 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| chr7.4 | exon | 29230108 | 29230173 | 29230108 | ID=MS.gene52176.t1.exon10;Parent=MS.gene52176.t1 |
| chr7.4 | CDS | 29230108 | 29230173 | 29230108 | ID=cds.MS.gene52176.t1;Parent=MS.gene52176.t1 |
| Gene Sequence |
| Protein sequence |
