Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52335.t1 | XP_003624504.2 | 93.8 | 260 | 11 | 2 | 2 | 256 | 106 | 365 | 1.60E-127 | 465.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52335.t1 | G7KX98 | 93.8 | 260 | 11 | 2 | 2 | 256 | 106 | 365 | 1.1e-127 | 465.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050752 | MS.gene52335 | 0.807255 | 5.53E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene52335 | 0.823214 | 1.56E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene52335 | 0.800919 | 1.15E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene52335 | 0.816442 | 5.52E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene52335 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene05469 | MS.gene52335 | 0.816111 | 6.54E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene52335 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene52335 | 0.817428 | 3.31E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene52335 | 0.828059 | 1.11E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene52335 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene52335 | 0.820511 | 6.60E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52335.t1 | MTR_7g084070 | 94.949 | 297 | 10 | 2 | 1 | 292 | 105 | 401 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52335.t1 | AT5G13970 | 35.276 | 326 | 147 | 15 | 1 | 289 | 105 | 403 | 1.00e-38 | 140 |
| MS.gene52335.t1 | AT5G13310 | 32.530 | 249 | 137 | 8 | 44 | 286 | 143 | 366 | 1.37e-19 | 88.2 |
| MS.gene52335.t1 | AT5G13310 | 32.530 | 249 | 137 | 8 | 44 | 286 | 143 | 366 | 1.37e-19 | 88.2 |
Find 76 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAACCGAACACGTTTAT+TGG | 0.185704 | 7.3:+24508060 | None:intergenic |
| AGTTTCCTTGCACAGATAAA+AGG | 0.269056 | 7.3:-24507812 | MS.gene52335:CDS |
| CATGGATGACAAAGCAAATA+AGG | 0.282071 | 7.3:-24507846 | MS.gene52335:CDS |
| AGATTTCTTCTTCGGTATAA+AGG | 0.324848 | 7.3:+24507739 | None:intergenic |
| TCATCGGCAGCTATGCTAAC+AGG | 0.343183 | 7.3:+24507650 | None:intergenic |
| TCAAACCGAACACGTTTATT+GGG | 0.352578 | 7.3:+24508061 | None:intergenic |
| GAAGGATTGCGAATATAATC+AGG | 0.355445 | 7.3:+24507905 | None:intergenic |
| GAAATCTGGTGATGTCACTA+TGG | 0.375778 | 7.3:-24507723 | MS.gene52335:CDS |
| AGGCTCTTGGCAAAGAGGGC+AGG | 0.383943 | 7.3:-24508336 | MS.gene52335:CDS |
| GCAAATTCCTGTGACTTTGA+TGG | 0.394108 | 7.3:+24507938 | None:intergenic |
| GGGATAAGTTCACGTGTGTT+TGG | 0.397330 | 7.3:-24508271 | MS.gene52335:CDS |
| ATGCAAAGTATCAATTTGAT+TGG | 0.400728 | 7.3:+24508177 | None:intergenic |
| CTCTTGGCAAAGAGGGCAGG+GGG | 0.408776 | 7.3:-24508333 | MS.gene52335:CDS |
| TGCAATGGAGGAGGATGAAC+AGG | 0.420285 | 7.3:-24507603 | MS.gene52335:CDS |
| GAGATAAATGAAGATGGAAT+CGG | 0.420742 | 7.3:-24508292 | MS.gene52335:CDS |
| ACATCACCAGATTTCTTCTT+CGG | 0.424129 | 7.3:+24507731 | None:intergenic |
| GGCTCTTGGCAAAGAGGGCA+GGG | 0.430694 | 7.3:-24508335 | MS.gene52335:CDS |
| GGAGAGAATAAGCTTGAAGT+TGG | 0.439007 | 7.3:-24507701 | MS.gene52335:CDS |
| CGGTTTGATTCTGATAAAGA+TGG | 0.442882 | 7.3:-24508046 | MS.gene52335:CDS |
| TTTATACCGAAGAAGAAATC+TGG | 0.445367 | 7.3:-24507737 | MS.gene52335:CDS |
| TTACTCTTCAAAATTGACTT+GGG | 0.458046 | 7.3:+24508106 | None:intergenic |
| GGAGGATCATTATGACAAAC+AGG | 0.458179 | 7.3:-24508356 | MS.gene52335:CDS |
| GAAGAAAACCGACGAGGACT+TGG | 0.459863 | 7.3:-24507528 | MS.gene52335:CDS |
| GCTCTTGGCAAAGAGGGCAG+GGG | 0.470014 | 7.3:-24508334 | MS.gene52335:CDS |
| AGATAAATGAAGATGGAATC+GGG | 0.470704 | 7.3:-24508291 | MS.gene52335:CDS |
| ATCACAGGCAGATGAAGCTT+TGG | 0.495942 | 7.3:-24507780 | MS.gene52335:CDS |
| CATTATGACAAACAGGCTCT+TGG | 0.497963 | 7.3:-24508349 | MS.gene52335:CDS |
| TTTACTCTTCAAAATTGACT+TGG | 0.500079 | 7.3:+24508105 | None:intergenic |
| GCATCACCACCACCGACGTC+TGG | 0.501233 | 7.3:+24508136 | None:intergenic |
| GAATAAGCTTGAAGTTGGAA+AGG | 0.511820 | 7.3:-24507696 | MS.gene52335:CDS |
| CTAGGCCCAATAAACGTGTT+CGG | 0.516488 | 7.3:-24508066 | MS.gene52335:CDS |
| AGAAGTTGAACCGCAAGTAC+AGG | 0.519023 | 7.3:-24507550 | MS.gene52335:CDS |
| AGCTGCATCCTCTTCCATTG+AGG | 0.521556 | 7.3:+24507970 | None:intergenic |
| AAGATAATCCTTCAGAGTCT+AGG | 0.526294 | 7.3:-24508084 | MS.gene52335:CDS |
| TGCTAGGATTAAGTTGAAGC+AGG | 0.527169 | 7.3:-24508212 | MS.gene52335:CDS |
| AAAAGGTTCAAATGCATCAC+AGG | 0.530303 | 7.3:-24507795 | MS.gene52335:CDS |
| ATGAGGGAGATAAATGAAGA+TGG | 0.530531 | 7.3:-24508298 | MS.gene52335:CDS |
| AGGATGAGAAGGAAGGAACC+AGG | 0.531038 | 7.3:-24508012 | MS.gene52335:CDS |
| GGTCTTCATTCGAACATCCC+TGG | 0.538346 | 7.3:+24507994 | None:intergenic |
| GAAGACCTCCTCAATGGAAG+AGG | 0.542891 | 7.3:-24507978 | MS.gene52335:CDS |
| TCGAATGAAGACCTCCTCAA+TGG | 0.542894 | 7.3:-24507984 | MS.gene52335:CDS |
| TCTTGGCAAAGAGGGCAGGG+GGG | 0.547481 | 7.3:-24508332 | MS.gene52335:CDS |
| GAAAACCGACGAGGACTTGG+AGG | 0.553003 | 7.3:-24507525 | MS.gene52335:CDS |
| AAATCAGCCATCAAAGTCAC+AGG | 0.553173 | 7.3:-24507945 | MS.gene52335:CDS |
| TTCGGTATAAAGGTAACAGA+TGG | 0.555047 | 7.3:+24507749 | None:intergenic |
| AAATGATGACGAGGATGAGA+AGG | 0.559814 | 7.3:-24508023 | MS.gene52335:CDS |
| AAACAGGCTCTTGGCAAAGA+GGG | 0.560590 | 7.3:-24508340 | MS.gene52335:CDS |
| GAATCACTTTATGCAGGATG+AGG | 0.571464 | 7.3:-24508377 | None:intergenic |
| TCACTTTATGCAGGATGAGG+AGG | 0.583527 | 7.3:-24508374 | None:intergenic |
| AAATCTGGTGATGTCACTAT+GGG | 0.584932 | 7.3:-24507722 | MS.gene52335:CDS |
| CATCGGCAGCTATGCTAACA+GGG | 0.589427 | 7.3:+24507651 | None:intergenic |
| TTATTGGGCCTAGACTCTGA+AGG | 0.592184 | 7.3:+24508076 | None:intergenic |
| CAAACAGGCTCTTGGCAAAG+AGG | 0.593885 | 7.3:-24508341 | MS.gene52335:CDS |
| GGCAGCTATGCTAACAGGGA+AGG | 0.594716 | 7.3:+24507655 | None:intergenic |
| TGCATCCTCTTCCATTGAGG+AGG | 0.595415 | 7.3:+24507973 | None:intergenic |
| TACTCTTCAAAATTGACTTG+GGG | 0.595453 | 7.3:+24508107 | None:intergenic |
| CCTACACCAGACGTCGGTGG+TGG | 0.598318 | 7.3:-24508142 | MS.gene52335:CDS |
| GGGCTAATCATACCGCTGCT+AGG | 0.601553 | 7.3:-24508228 | MS.gene52335:CDS |
| CAGCGGTATGATTAGCCCGT+GGG | 0.608205 | 7.3:+24508233 | None:intergenic |
| TGATGTATGTGCAATGGAGG+AGG | 0.619859 | 7.3:-24507612 | MS.gene52335:CDS |
| AGGCTCCTCCAAGTCCTCGT+CGG | 0.620365 | 7.3:+24507520 | None:intergenic |
| GCAGCGGTATGATTAGCCCG+TGG | 0.621262 | 7.3:+24508232 | None:intergenic |
| CCACCACCGACGTCTGGTGT+AGG | 0.628069 | 7.3:+24508142 | None:intergenic |
| GTATAAAGGTAACAGATGGA+AGG | 0.634228 | 7.3:+24507753 | None:intergenic |
| GATGACGAGGATGAGAAGGA+AGG | 0.638055 | 7.3:-24508019 | MS.gene52335:CDS |
| CAGTGATGTATGTGCAATGG+AGG | 0.643095 | 7.3:-24507615 | MS.gene52335:CDS |
| GGATGAACAGGAAGTTATCG+AGG | 0.649044 | 7.3:-24507591 | MS.gene52335:CDS |
| AAACAGTGATGTATGTGCAA+TGG | 0.651519 | 7.3:-24507618 | MS.gene52335:CDS |
| TTCCAAACATGCTACACAGT+AGG | 0.652049 | 7.3:+24507500 | None:intergenic |
| GGATGAGAAGGAAGGAACCA+GGG | 0.666124 | 7.3:-24508011 | MS.gene52335:CDS |
| GGATGACAAAGCAAATAAGG+AGG | 0.689367 | 7.3:-24507843 | MS.gene52335:CDS |
| CTTCAACTTAATCCTAGCAG+CGG | 0.691169 | 7.3:+24508216 | None:intergenic |
| AAACCTACACCAGACGTCGG+TGG | 0.708641 | 7.3:-24508145 | MS.gene52335:CDS |
| GAGAAACCTACACCAGACGT+CGG | 0.745038 | 7.3:-24508148 | MS.gene52335:CDS |
| TAAAGATGGAAATGATGACG+AGG | 0.752226 | 7.3:-24508032 | MS.gene52335:CDS |
| GTACAGGAAGAAAACCGACG+AGG | 0.795841 | 7.3:-24507534 | MS.gene52335:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTACTCTTCAAAATTGACT+TGG | + | chr7.3:24507776-24507795 | None:intergenic | 25.0% |
| !! | ATGCAAAGTATCAATTTGAT+TGG | + | chr7.3:24507704-24507723 | None:intergenic | 25.0% |
| !! | TTACTCTTCAAAATTGACTT+GGG | + | chr7.3:24507775-24507794 | None:intergenic | 25.0% |
| !!! | GTATAATGTGTGTATTTTGA+AGG | + | chr7.3:24507994-24508013 | None:intergenic | 25.0% |
| AGATAAATGAAGATGGAATC+GGG | - | chr7.3:24507587-24507606 | MS.gene52335:CDS | 30.0% | |
| AGATTTCTTCTTCGGTATAA+AGG | + | chr7.3:24508142-24508161 | None:intergenic | 30.0% | |
| GAGATAAATGAAGATGGAAT+CGG | - | chr7.3:24507586-24507605 | MS.gene52335:CDS | 30.0% | |
| TTTATACCGAAGAAGAAATC+TGG | - | chr7.3:24508141-24508160 | MS.gene52335:CDS | 30.0% | |
| !! | TACTCTTCAAAATTGACTTG+GGG | + | chr7.3:24507774-24507793 | None:intergenic | 30.0% |
| !! | TTTTGATTCTTCAACTGACA+TGG | - | chr7.3:24508014-24508033 | MS.gene52335:CDS | 30.0% |
| AAAAGGTTCAAATGCATCAC+AGG | - | chr7.3:24508083-24508102 | MS.gene52335:CDS | 35.0% | |
| AAACAGTGATGTATGTGCAA+TGG | - | chr7.3:24508260-24508279 | MS.gene52335:CDS | 35.0% | |
| AAGATAATCCTTCAGAGTCT+AGG | - | chr7.3:24507794-24507813 | MS.gene52335:CDS | 35.0% | |
| ACATCACCAGATTTCTTCTT+CGG | + | chr7.3:24508150-24508169 | None:intergenic | 35.0% | |
| AGTTTCCTTGCACAGATAAA+AGG | - | chr7.3:24508066-24508085 | MS.gene52335:CDS | 35.0% | |
| ATCAAACCGAACACGTTTAT+TGG | + | chr7.3:24507821-24507840 | None:intergenic | 35.0% | |
| ATGAGGGAGATAAATGAAGA+TGG | - | chr7.3:24507580-24507599 | MS.gene52335:CDS | 35.0% | |
| CATGGATGACAAAGCAAATA+AGG | - | chr7.3:24508032-24508051 | MS.gene52335:CDS | 35.0% | |
| CGGTTTGATTCTGATAAAGA+TGG | - | chr7.3:24507832-24507851 | MS.gene52335:CDS | 35.0% | |
| GAAGGATTGCGAATATAATC+AGG | + | chr7.3:24507976-24507995 | None:intergenic | 35.0% | |
| GAATAAGCTTGAAGTTGGAA+AGG | - | chr7.3:24508182-24508201 | MS.gene52335:CDS | 35.0% | |
| GTATAAAGGTAACAGATGGA+AGG | + | chr7.3:24508128-24508147 | None:intergenic | 35.0% | |
| TCAAACCGAACACGTTTATT+GGG | + | chr7.3:24507820-24507839 | None:intergenic | 35.0% | |
| TTCGGTATAAAGGTAACAGA+TGG | + | chr7.3:24508132-24508151 | None:intergenic | 35.0% | |
| ! | AAATCTGGTGATGTCACTAT+GGG | - | chr7.3:24508156-24508175 | MS.gene52335:CDS | 35.0% |
| ! | ACTGTTTTCAGTGTCATCAT+CGG | + | chr7.3:24508247-24508266 | None:intergenic | 35.0% |
| ! | TAAAGATGGAAATGATGACG+AGG | - | chr7.3:24507846-24507865 | MS.gene52335:CDS | 35.0% |
| ! | TTGAACCTTTTATCTGTGCA+AGG | + | chr7.3:24508074-24508093 | None:intergenic | 35.0% |
| AAATCAGCCATCAAAGTCAC+AGG | - | chr7.3:24507933-24507952 | MS.gene52335:CDS | 40.0% | |
| CATTATGACAAACAGGCTCT+TGG | - | chr7.3:24507529-24507548 | MS.gene52335:CDS | 40.0% | |
| CTTCAACTTAATCCTAGCAG+CGG | + | chr7.3:24507665-24507684 | None:intergenic | 40.0% | |
| GCAAATTCCTGTGACTTTGA+TGG | + | chr7.3:24507943-24507962 | None:intergenic | 40.0% | |
| GGAGAGAATAAGCTTGAAGT+TGG | - | chr7.3:24508177-24508196 | MS.gene52335:CDS | 40.0% | |
| GGAGGATCATTATGACAAAC+AGG | - | chr7.3:24507522-24507541 | MS.gene52335:CDS | 40.0% | |
| GGATGACAAAGCAAATAAGG+AGG | - | chr7.3:24508035-24508054 | MS.gene52335:CDS | 40.0% | |
| ! | AAATGATGACGAGGATGAGA+AGG | - | chr7.3:24507855-24507874 | MS.gene52335:CDS | 40.0% |
| ! | GAAATCTGGTGATGTCACTA+TGG | - | chr7.3:24508155-24508174 | MS.gene52335:CDS | 40.0% |
| !! | TGCTAGGATTAAGTTGAAGC+AGG | - | chr7.3:24507666-24507685 | MS.gene52335:CDS | 40.0% |
| !!! | AGATTTTTCAAGAGACCCAC+GGG | - | chr7.3:24507630-24507649 | MS.gene52335:CDS | 40.0% |
| !!! | GAGATTTTTCAAGAGACCCA+CGG | - | chr7.3:24507629-24507648 | MS.gene52335:CDS | 40.0% |
| AAACAGGCTCTTGGCAAAGA+GGG | - | chr7.3:24507538-24507557 | MS.gene52335:CDS | 45.0% | |
| AGAAGTTGAACCGCAAGTAC+AGG | - | chr7.3:24508328-24508347 | MS.gene52335:CDS | 45.0% | |
| ATCACAGGCAGATGAAGCTT+TGG | - | chr7.3:24508098-24508117 | MS.gene52335:CDS | 45.0% | |
| CAGTGATGTATGTGCAATGG+AGG | - | chr7.3:24508263-24508282 | MS.gene52335:CDS | 45.0% | |
| CTAGGCCCAATAAACGTGTT+CGG | - | chr7.3:24507812-24507831 | MS.gene52335:CDS | 45.0% | |
| GGATGAACAGGAAGTTATCG+AGG | - | chr7.3:24508287-24508306 | MS.gene52335:CDS | 45.0% | |
| GGGATAAGTTCACGTGTGTT+TGG | - | chr7.3:24507607-24507626 | MS.gene52335:CDS | 45.0% | |
| GGGGGATCGTTTGTATATGA+GGG | - | chr7.3:24507564-24507583 | MS.gene52335:CDS | 45.0% | |
| TCGAATGAAGACCTCCTCAA+TGG | - | chr7.3:24507894-24507913 | MS.gene52335:CDS | 45.0% | |
| TGATGTATGTGCAATGGAGG+AGG | - | chr7.3:24508266-24508285 | MS.gene52335:CDS | 45.0% | |
| TTATTGGGCCTAGACTCTGA+AGG | + | chr7.3:24507805-24507824 | None:intergenic | 45.0% | |
| ! | CGGTTTTCTTCCTGTACTTG+CGG | + | chr7.3:24508341-24508360 | None:intergenic | 45.0% |
| AGCTGCATCCTCTTCCATTG+AGG | + | chr7.3:24507911-24507930 | None:intergenic | 50.0% | |
| AGGATGAGAAGGAAGGAACC+AGG | - | chr7.3:24507866-24507885 | MS.gene52335:CDS | 50.0% | |
| CAAACAGGCTCTTGGCAAAG+AGG | - | chr7.3:24507537-24507556 | MS.gene52335:CDS | 50.0% | |
| CATCGGCAGCTATGCTAACA+GGG | + | chr7.3:24508230-24508249 | None:intergenic | 50.0% | |
| GAAGAAAACCGACGAGGACT+TGG | - | chr7.3:24508350-24508369 | MS.gene52335:CDS | 50.0% | |
| GAAGACCTCCTCAATGGAAG+AGG | - | chr7.3:24507900-24507919 | MS.gene52335:CDS | 50.0% | |
| GAGAAACCTACACCAGACGT+CGG | - | chr7.3:24507730-24507749 | MS.gene52335:CDS | 50.0% | |
| GATGACGAGGATGAGAAGGA+AGG | - | chr7.3:24507859-24507878 | MS.gene52335:CDS | 50.0% | |
| GGATGAGAAGGAAGGAACCA+GGG | - | chr7.3:24507867-24507886 | MS.gene52335:CDS | 50.0% | |
| GGGGGGATCGTTTGTATATG+AGG | - | chr7.3:24507563-24507582 | MS.gene52335:CDS | 50.0% | |
| GGTCTTCATTCGAACATCCC+TGG | + | chr7.3:24507887-24507906 | None:intergenic | 50.0% | |
| GTACAGGAAGAAAACCGACG+AGG | - | chr7.3:24508344-24508363 | MS.gene52335:CDS | 50.0% | |
| TCATCGGCAGCTATGCTAAC+AGG | + | chr7.3:24508231-24508250 | None:intergenic | 50.0% | |
| TGCAATGGAGGAGGATGAAC+AGG | - | chr7.3:24508275-24508294 | MS.gene52335:CDS | 50.0% | |
| TGCATCCTCTTCCATTGAGG+AGG | + | chr7.3:24507908-24507927 | None:intergenic | 50.0% | |
| AAACCTACACCAGACGTCGG+TGG | - | chr7.3:24507733-24507752 | MS.gene52335:CDS | 55.0% | |
| GAAAACCGACGAGGACTTGG+AGG | - | chr7.3:24508353-24508372 | MS.gene52335:CDS | 55.0% | |
| GGCAGCTATGCTAACAGGGA+AGG | + | chr7.3:24508226-24508245 | None:intergenic | 55.0% | |
| GGGCTAATCATACCGCTGCT+AGG | - | chr7.3:24507650-24507669 | MS.gene52335:CDS | 55.0% | |
| ! | CAGCGGTATGATTAGCCCGT+GGG | + | chr7.3:24507648-24507667 | None:intergenic | 55.0% |
| AGGCTCCTCCAAGTCCTCGT+CGG | + | chr7.3:24508361-24508380 | None:intergenic | 60.0% | |
| AGGCTCTTGGCAAAGAGGGC+AGG | - | chr7.3:24507542-24507561 | MS.gene52335:CDS | 60.0% | |
| CTCTTGGCAAAGAGGGCAGG+GGG | - | chr7.3:24507545-24507564 | MS.gene52335:CDS | 60.0% | |
| GCTCTTGGCAAAGAGGGCAG+GGG | - | chr7.3:24507544-24507563 | MS.gene52335:CDS | 60.0% | |
| GGCTCTTGGCAAAGAGGGCA+GGG | - | chr7.3:24507543-24507562 | MS.gene52335:CDS | 60.0% | |
| TCTTGGCAAAGAGGGCAGGG+GGG | - | chr7.3:24507546-24507565 | MS.gene52335:CDS | 60.0% | |
| ! | GCAGCGGTATGATTAGCCCG+TGG | + | chr7.3:24507649-24507668 | None:intergenic | 60.0% |
| CCACCACCGACGTCTGGTGT+AGG | + | chr7.3:24507739-24507758 | None:intergenic | 65.0% | |
| CCTACACCAGACGTCGGTGG+TGG | - | chr7.3:24507736-24507755 | MS.gene52335:CDS | 65.0% | |
| GCATCACCACCACCGACGTC+TGG | + | chr7.3:24507745-24507764 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24507511 | 24508389 | 24507511 | ID=MS.gene52335 |
| chr7.3 | mRNA | 24507511 | 24508389 | 24507511 | ID=MS.gene52335.t1;Parent=MS.gene52335 |
| chr7.3 | exon | 24507511 | 24508389 | 24507511 | ID=MS.gene52335.t1.exon1;Parent=MS.gene52335.t1 |
| chr7.3 | CDS | 24507511 | 24508389 | 24507511 | ID=cds.MS.gene52335.t1;Parent=MS.gene52335.t1 |
| Gene Sequence |
| Protein sequence |
