Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52766.t1 | XP_013462277.1 | 99.6 | 492 | 2 | 0 | 1 | 492 | 1 | 492 | 7.40E-303 | 1048.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52766.t1 | O48561 | 93.3 | 492 | 33 | 0 | 1 | 492 | 1 | 492 | 1.3e-287 | 989.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52766.t1 | A0A072V3A8 | 99.6 | 492 | 2 | 0 | 1 | 492 | 1 | 492 | 5.3e-303 | 1048.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050876 | MS.gene52766 | 0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene053443 | MS.gene52766 | -0.813053 | 3.11E-51 | -1.69E-46 |
| MS.gene055765 | MS.gene52766 | -0.818732 | 1.68E-52 | -1.69E-46 |
| MS.gene055776 | MS.gene52766 | 0.818176 | 2.25E-52 | -1.69E-46 |
| MS.gene055849 | MS.gene52766 | 0.820294 | 7.40E-53 | -1.69E-46 |
| MS.gene057684 | MS.gene52766 | 0.908047 | 2.62E-81 | -1.69E-46 |
| MS.gene057687 | MS.gene52766 | 0.807215 | 5.64E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene52766 | -0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene52766 | 0.815894 | 7.32E-52 | -1.69E-46 |
| MS.gene060906 | MS.gene52766 | -0.805707 | 1.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52766.t1 | MTR_3g115370 | 99.593 | 492 | 2 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1026 |
| MS.gene52766.t1 | MTR_3g115370 | 97.902 | 429 | 9 | 0 | 1 | 429 | 1 | 429 | 0.0 | 877 |
| MS.gene52766.t1 | MTR_1386s0010 | 45.303 | 479 | 250 | 6 | 9 | 483 | 21 | 491 | 1.32e-139 | 412 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52766.t1 | AT4G35090 | 87.602 | 492 | 61 | 0 | 1 | 492 | 1 | 492 | 0.0 | 922 |
| MS.gene52766.t1 | AT4G35090 | 87.295 | 488 | 62 | 0 | 5 | 492 | 5 | 492 | 0.0 | 912 |
| MS.gene52766.t1 | AT1G20630 | 85.743 | 491 | 70 | 0 | 1 | 491 | 1 | 491 | 0.0 | 897 |
| MS.gene52766.t1 | AT4G35090 | 87.764 | 474 | 58 | 0 | 1 | 474 | 1 | 474 | 0.0 | 891 |
| MS.gene52766.t1 | AT1G20620 | 78.455 | 492 | 106 | 0 | 1 | 492 | 1 | 492 | 0.0 | 845 |
| MS.gene52766.t1 | AT1G20620 | 78.234 | 487 | 106 | 0 | 6 | 492 | 65 | 551 | 0.0 | 835 |
| MS.gene52766.t1 | AT1G20620 | 77.033 | 492 | 106 | 1 | 1 | 492 | 1 | 485 | 0.0 | 823 |
| MS.gene52766.t1 | AT1G20620 | 78.282 | 419 | 91 | 0 | 1 | 419 | 1 | 419 | 0.0 | 717 |
| MS.gene52766.t1 | AT1G20620 | 76.393 | 377 | 89 | 0 | 116 | 492 | 1 | 377 | 0.0 | 639 |
| MS.gene52766.t1 | AT1G20620 | 77.818 | 275 | 61 | 0 | 116 | 390 | 1 | 275 | 6.92e-167 | 473 |
Find 169 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGGTCTCTCAAGGTTTC+AGG | 0.120854 | 3.1:-91273688 | None:intergenic |
| GAGAACATGTGAAGGCTTTC+TGG | 0.167930 | 3.1:-91274444 | None:intergenic |
| AACATGAGGCCTAGCATTTA+AGG | 0.173184 | 3.1:+91276169 | MS.gene52766:CDS |
| GCGCTTACAATTCTCCTTTC+TGG | 0.174679 | 3.1:+91272392 | MS.gene52766:CDS |
| CCTTTCTGGACTACAAATTC+TGG | 0.264260 | 3.1:+91272406 | MS.gene52766:CDS |
| GGATCCGTTCCCTATCAAAT+TGG | 0.267128 | 3.1:-91273507 | None:intergenic |
| GTTGGATCCTCCCACCTTAA+TGG | 0.271983 | 3.1:-91274625 | None:intergenic |
| CTTTCCCAGCCTTGTTGATC+AGG | 0.273529 | 3.1:-91274539 | None:intergenic |
| TATAGGCACATGGATGGTTT+TGG | 0.286155 | 3.1:+91274501 | MS.gene52766:CDS |
| ATTCTCCTGGATGTGGGACT+TGG | 0.295541 | 3.1:-91274391 | None:intergenic |
| CTGGCATGGACAACACGTTC+TGG | 0.317458 | 3.1:-91273529 | None:intergenic |
| TGGATGTGGGACTTGGGGTT+GGG | 0.323157 | 3.1:-91274384 | None:intergenic |
| TTAAGAGCATGGACCATATC+TGG | 0.327136 | 3.1:-91274360 | None:intergenic |
| TTCTCCTGGATGTGGGACTT+GGG | 0.330541 | 3.1:-91274390 | None:intergenic |
| CTGGATGTGGGACTTGGGGT+TGG | 0.333029 | 3.1:-91274385 | None:intergenic |
| GCAGGAAGTTGCAGATAGTT+TGG | 0.333290 | 3.1:-91274978 | None:intergenic |
| TGCTTGAAGTTGTTCTGCTT+TGG | 0.342575 | 3.1:-91275782 | None:intergenic |
| CTCCTTCCTGTTTGATGATG+TGG | 0.344839 | 3.1:+91274464 | MS.gene52766:CDS |
| CAGGGTAACTTTGACCTTGT+TGG | 0.356144 | 3.1:+91274294 | MS.gene52766:intron |
| TTCATTAATTTCTACCTCTC+TGG | 0.360898 | 3.1:-91273734 | None:intergenic |
| CAAATTCTGGTGCACCTGTT+TGG | 0.367034 | 3.1:+91272419 | MS.gene52766:CDS |
| CCCATGAAATCCGCAGCATC+TGG | 0.368012 | 3.1:+91275981 | MS.gene52766:CDS |
| ACCCTTTGCACTTGCTCCCC+TGG | 0.372101 | 3.1:-91273548 | None:intergenic |
| CTGGAGAGCGATACCGATCT+TGG | 0.372596 | 3.1:+91275807 | MS.gene52766:CDS |
| AAAAGCTTGCCCAATTTGAT+AGG | 0.374612 | 3.1:+91273497 | MS.gene52766:CDS |
| AGTCCCACATCCAGGAGAAT+TGG | 0.375895 | 3.1:+91274394 | MS.gene52766:CDS |
| CTGTCTTCTTCGTTCATGAC+GGG | 0.379692 | 3.1:+91274328 | MS.gene52766:CDS |
| TGATAATCTTCCAAGAGAAT+TGG | 0.382249 | 3.1:-91273466 | None:intergenic |
| TTTGGCAGGTCCAATTCTCT+TGG | 0.391620 | 3.1:+91273456 | MS.gene52766:intron |
| TCCAGATGCTGCGGATTTCA+TGG | 0.392167 | 3.1:-91275982 | None:intergenic |
| GTTGGAGGAAGAGGCCATTA+AGG | 0.394703 | 3.1:+91274611 | MS.gene52766:CDS |
| TCAAATTTGTCTTCGTGAGC+AGG | 0.405045 | 3.1:-91274732 | None:intergenic |
| TTGCACTTGCTCCCCTGGCA+TGG | 0.415695 | 3.1:-91273543 | None:intergenic |
| TCCTTCCTGTTTGATGATGT+GGG | 0.418017 | 3.1:+91274465 | MS.gene52766:CDS |
| TGGGTGTCCCACAAGATTAT+AGG | 0.422410 | 3.1:+91274484 | MS.gene52766:CDS |
| CCTTCAGCCCGTAGGTCGCC+TGG | 0.422999 | 3.1:+91274803 | MS.gene52766:CDS |
| TGTCCTGCCATTATTGTGCC+TGG | 0.427513 | 3.1:+91274879 | MS.gene52766:CDS |
| GTATTGTTGTATACCTTGTA+TGG | 0.430027 | 3.1:-91272189 | None:intergenic |
| CCTGTCTTCTTCGTTCATGA+CGG | 0.433221 | 3.1:+91274327 | MS.gene52766:CDS |
| GAGGAGTTGTTGTTCCAAAC+AGG | 0.433945 | 3.1:-91272433 | None:intergenic |
| ATTGTTGTGGTGAGCACACT+TGG | 0.434174 | 3.1:-91275009 | None:intergenic |
| GCAGATTTCCTACGAGCTCC+TGG | 0.438797 | 3.1:+91273610 | MS.gene52766:CDS |
| AGGTCAATTACTTCCCTTCA+AGG | 0.441379 | 3.1:+91275224 | MS.gene52766:intron |
| CTTGGAAGATTATCATCTTG+TGG | 0.451741 | 3.1:+91273474 | MS.gene52766:CDS |
| ACCTCTAGATCCAACGGTTA+GGG | 0.454007 | 3.1:-91272455 | None:intergenic |
| ATATACACCAGGCACAATAA+TGG | 0.457625 | 3.1:-91274886 | None:intergenic |
| ATGCAGGCTGATCGATCTCT+TGG | 0.461101 | 3.1:+91276124 | MS.gene52766:intron |
| TTCTCCAATTCTCCTGGATG+TGG | 0.467363 | 3.1:-91274398 | None:intergenic |
| CAAGGATTCTCCAATTCTCC+TGG | 0.469085 | 3.1:-91274404 | None:intergenic |
| CCATGTGCCTATAATCTTGT+GGG | 0.470182 | 3.1:-91274491 | None:intergenic |
| GAGGGTCTCTCAAGGTTTCA+GGG | 0.471242 | 3.1:-91273687 | None:intergenic |
| TACCTCTAGATCCAACGGTT+AGG | 0.473805 | 3.1:-91272456 | None:intergenic |
| AAGATAGATTTCTCCGCAGA+TGG | 0.473911 | 3.1:+91275930 | MS.gene52766:CDS |
| CAAGATCGGTATCGCTCTCC+AGG | 0.473917 | 3.1:-91275806 | None:intergenic |
| TTTCTCTGCGTGCCGTGAAA+AGG | 0.475377 | 3.1:+91275294 | MS.gene52766:CDS |
| CTGGATCTCATACTGGTCTC+AGG | 0.475961 | 3.1:+91276000 | MS.gene52766:CDS |
| GTTTCATGAATTTCATTCAC+AGG | 0.477320 | 3.1:+91275042 | MS.gene52766:CDS |
| TGGCATGGACAACACGTTCT+GGG | 0.477969 | 3.1:-91273528 | None:intergenic |
| CAGAACGTGTTGTCCATGCC+AGG | 0.477991 | 3.1:+91273530 | MS.gene52766:CDS |
| TCCTGTTCGTCATGCAGAAA+AGG | 0.478892 | 3.1:+91275252 | MS.gene52766:CDS |
| CTATGTTCTTGTTCAAGACC+AGG | 0.484090 | 3.1:-91274821 | None:intergenic |
| CAGAACAACTTCAAGCAGCC+TGG | 0.486042 | 3.1:+91275788 | MS.gene52766:CDS |
| GATCCGTTCCCTATCAAATT+GGG | 0.489050 | 3.1:-91273506 | None:intergenic |
| TCTCCTGGATGTGGGACTTG+GGG | 0.492998 | 3.1:-91274389 | None:intergenic |
| TTTCCCAGCCTTGTTGATCA+GGG | 0.494239 | 3.1:-91274538 | None:intergenic |
| GAAAGGAGAATTGTAAGCGC+TGG | 0.495605 | 3.1:-91272389 | None:intergenic |
| GTAGGAAATCTGCACAAGTC+AGG | 0.497677 | 3.1:-91273600 | None:intergenic |
| GAGAAATTAGCAGTAGGAAT+GGG | 0.501006 | 3.1:-91275277 | None:intergenic |
| CAGGCGACCTACGGGCTGAA+GGG | 0.503163 | 3.1:-91274802 | None:intergenic |
| GTTCAAGACCAGGCGACCTA+CGG | 0.504173 | 3.1:-91274811 | None:intergenic |
| TGGGGTTGGGTTTAAGAGCA+TGG | 0.506473 | 3.1:-91274371 | None:intergenic |
| CAGCAGCAATTGAATCATAC+AGG | 0.508681 | 3.1:-91274668 | None:intergenic |
| TCGCAACAACCTTAAATGCT+AGG | 0.510006 | 3.1:-91276178 | None:intergenic |
| GGACACCCACATCATCAAAC+AGG | 0.511274 | 3.1:-91274470 | None:intergenic |
| ACCGATCTTGGGCACCCGAC+AGG | 0.511670 | 3.1:+91275819 | MS.gene52766:CDS |
| CAGTGTACGTGAAATTTCAC+TGG | 0.512177 | 3.1:+91274562 | MS.gene52766:CDS |
| GCACACTTGGGAGCATTAGC+AGG | 0.512211 | 3.1:-91274996 | None:intergenic |
| ACCTGTCGGGTGCCCAAGAT+CGG | 0.512897 | 3.1:-91275820 | None:intergenic |
| GCAGCATCTGGATCTCATAC+TGG | 0.513786 | 3.1:+91275993 | MS.gene52766:CDS |
| ATGACAGGTGTCTGAACTCC+AGG | 0.514052 | 3.1:-91273628 | None:intergenic |
| GTATACCTTGTATGGATCCA+TGG | 0.516916 | 3.1:-91272181 | None:intergenic |
| TATTCCCTGATCAACAAGGC+TGG | 0.522948 | 3.1:+91274534 | MS.gene52766:CDS |
| TTCAAGACCAGGCGACCTAC+GGG | 0.524652 | 3.1:-91274810 | None:intergenic |
| CAAGTCTTAGTTACATCAAG+TGG | 0.525209 | 3.1:-91274762 | None:intergenic |
| TTGAGTAGCATGGCTGTGGT+TGG | 0.529136 | 3.1:-91274643 | None:intergenic |
| GATTCACAGAGGCACAGACT+TGG | 0.529651 | 3.1:+91274954 | MS.gene52766:CDS |
| AGAGAAATTAGCAGTAGGAA+TGG | 0.530921 | 3.1:-91275278 | None:intergenic |
| TGGAGAGCGATACCGATCTT+GGG | 0.535088 | 3.1:+91275808 | MS.gene52766:CDS |
| CGGATTTCATGGGTGACGCG+TGG | 0.535385 | 3.1:-91275971 | None:intergenic |
| CAACCCCAAGTCCCACATCC+AGG | 0.536425 | 3.1:+91274386 | MS.gene52766:CDS |
| CCAGGCGACCTACGGGCTGA+AGG | 0.540862 | 3.1:-91274803 | None:intergenic |
| GTAGAGAAACGCACAATGAC+AGG | 0.540987 | 3.1:-91273643 | None:intergenic |
| TCCATGTGCCTATAATCTTG+TGG | 0.541036 | 3.1:-91274492 | None:intergenic |
| CACTTGATGTAACTAAGACT+TGG | 0.542839 | 3.1:+91274763 | MS.gene52766:CDS |
| CTGTATGATTCAATTGCTGC+TGG | 0.545137 | 3.1:+91274669 | MS.gene52766:CDS |
| TGAAGGGGTATAATGTCCTC+AGG | 0.545718 | 3.1:-91274786 | None:intergenic |
| GCCAGGGGAGCAAGTGCAAA+GGG | 0.546598 | 3.1:+91273547 | MS.gene52766:CDS |
| AAAGCTTGCCCAATTTGATA+GGG | 0.548471 | 3.1:+91273498 | MS.gene52766:CDS |
| TCTCCAATTCTCCTGGATGT+GGG | 0.550324 | 3.1:-91274397 | None:intergenic |
| TGCCAGGGGAGCAAGTGCAA+AGG | 0.551070 | 3.1:+91273546 | MS.gene52766:CDS |
| CCAGATGCTGCGGATTTCAT+GGG | 0.552199 | 3.1:-91275981 | None:intergenic |
| TCCCTAACCGTTGGATCTAG+AGG | 0.553455 | 3.1:+91272454 | MS.gene52766:CDS |
| GAAGTGTCTGTTGGAGGAAG+AGG | 0.554768 | 3.1:+91274602 | MS.gene52766:CDS |
| CCGTCATGAACGAAGAAGAC+AGG | 0.555643 | 3.1:-91274327 | None:intergenic |
| TTTCATTCACAGGGATGAAG+AGG | 0.555667 | 3.1:+91275052 | MS.gene52766:CDS |
| TTGCCCAATTTGATAGGGAA+CGG | 0.556792 | 3.1:+91273503 | MS.gene52766:CDS |
| CGAACAGGATCATACCTTGA+AGG | 0.557537 | 3.1:-91275238 | None:intergenic |
| AACAACTCCTCCCTAACCGT+TGG | 0.562412 | 3.1:+91272445 | MS.gene52766:CDS |
| AGGCGACCTACGGGCTGAAG+GGG | 0.563132 | 3.1:-91274801 | None:intergenic |
| GAACAGGATCATACCTTGAA+GGG | 0.569231 | 3.1:-91275237 | None:intergenic |
| GGAGAATTGTAAGCGCTGGA+TGG | 0.570856 | 3.1:-91272385 | None:intergenic |
| AATTGTAAGCGCTGGATGGA+CGG | 0.572978 | 3.1:-91272381 | None:intergenic |
| ATTCACAGAGGCACAGACTT+GGG | 0.574309 | 3.1:+91274955 | MS.gene52766:CDS |
| ATTCCCTGATCAACAAGGCT+GGG | 0.574864 | 3.1:+91274535 | MS.gene52766:CDS |
| GAAAGTGAGAAAAGAAGTCA+AGG | 0.576589 | 3.1:-91274422 | None:intergenic |
| CCAGAATTTGTAGTCCAGAA+AGG | 0.579292 | 3.1:-91272406 | None:intergenic |
| GGATTTCATGGGTGACGCGT+GGG | 0.579795 | 3.1:-91275970 | None:intergenic |
| ATGTGGTGTGAAGTGTCTGT+TGG | 0.580105 | 3.1:+91274593 | MS.gene52766:CDS |
| GGAGGAAGAGGCCATTAAGG+TGG | 0.581156 | 3.1:+91274614 | MS.gene52766:CDS |
| ACCAACCATGGATCCATACA+AGG | 0.581655 | 3.1:+91272176 | None:intergenic |
| TTCATGGGTGACGCGTGGGT+CGG | 0.582291 | 3.1:-91275966 | None:intergenic |
| TGAACAAACAGTTTCCACTC+AGG | 0.583241 | 3.1:-91274699 | None:intergenic |
| AGATAGATTTCTCCGCAGAT+GGG | 0.587386 | 3.1:+91275931 | MS.gene52766:CDS |
| CAGACACTTCACACCACATG+TGG | 0.589761 | 3.1:-91274589 | None:intergenic |
| CAAGATTATAGGCACATGGA+TGG | 0.589982 | 3.1:+91274495 | MS.gene52766:CDS |
| TAGATTTCTCCGCAGATGGG+TGG | 0.591794 | 3.1:+91275934 | MS.gene52766:CDS |
| GAGGAAGAGGCCATTAAGGT+GGG | 0.593020 | 3.1:+91274615 | MS.gene52766:CDS |
| TTGCATCTCATCTGAACATG+AGG | 0.594906 | 3.1:+91276155 | MS.gene52766:CDS |
| CAGGAAAGTTGTTTCCAACA+AGG | 0.596437 | 3.1:-91274308 | None:intergenic |
| GGTCTTGAGTAGCATGGCTG+TGG | 0.596746 | 3.1:-91274647 | None:intergenic |
| CCCACAAGATTATAGGCACA+TGG | 0.598312 | 3.1:+91274491 | MS.gene52766:CDS |
| TGGTGTGAAGTGTCTGTTGG+AGG | 0.598470 | 3.1:+91274596 | MS.gene52766:CDS |
| AGAACGTGTTGTCCATGCCA+GGG | 0.598996 | 3.1:+91273531 | MS.gene52766:CDS |
| TTTCATGAATTTCATTCACA+GGG | 0.601023 | 3.1:+91275043 | MS.gene52766:CDS |
| GAACGTGTTGTCCATGCCAG+GGG | 0.604058 | 3.1:+91273532 | MS.gene52766:CDS |
| ACACCAGGCACAATAATGGC+AGG | 0.606260 | 3.1:-91274882 | None:intergenic |
| AAAACCTCGAGGGTCTCTCA+AGG | 0.607779 | 3.1:-91273695 | None:intergenic |
| ATGATAAGATGCTTCAAACC+AGG | 0.609656 | 3.1:+91274916 | MS.gene52766:CDS |
| CACATATTCCCTGATCAACA+AGG | 0.618103 | 3.1:+91274530 | MS.gene52766:CDS |
| ATCAGCATAAGAGAAAATCC+TGG | 0.623303 | 3.1:-91274934 | None:intergenic |
| ATTATACCCCTTCAGCCCGT+AGG | 0.626812 | 3.1:+91274795 | MS.gene52766:CDS |
| ATTTCACAGCAAAACCTCGA+GGG | 0.627533 | 3.1:-91273705 | None:intergenic |
| AGATATACCTCTAGATCCAA+CGG | 0.631010 | 3.1:-91272461 | None:intergenic |
| TTGTTGTGGTGAGCACACTT+GGG | 0.632968 | 3.1:-91275008 | None:intergenic |
| TGAAATTCATGAAACCCTCA+TGG | 0.640371 | 3.1:-91275034 | None:intergenic |
| TCTGAACTCCAGGAGCTCGT+AGG | 0.643310 | 3.1:-91273618 | None:intergenic |
| TCTAGATCCAACGGTTAGGG+AGG | 0.644041 | 3.1:-91272452 | None:intergenic |
| ACAGGAAGGAGAACATGTGA+AGG | 0.645069 | 3.1:-91274452 | None:intergenic |
| TGTGCCTGGTGTATATTACT+CGG | 0.653190 | 3.1:+91274893 | MS.gene52766:CDS |
| CATACAGGTCTTGAGTAGCA+TGG | 0.654493 | 3.1:-91274653 | None:intergenic |
| TTTCACTGGAAGCCCACATG+TGG | 0.658894 | 3.1:+91274576 | MS.gene52766:CDS |
| AAGTCTTAGTTACATCAAGT+GGG | 0.661737 | 3.1:-91274761 | None:intergenic |
| AACCCTCATGGTGATTGTTG+TGG | 0.663659 | 3.1:-91275022 | None:intergenic |
| CACCACAACAATCACCATGA+GGG | 0.667620 | 3.1:+91275020 | MS.gene52766:CDS |
| TCTACTGTCATTCATGAACG+TGG | 0.669221 | 3.1:+91273661 | MS.gene52766:CDS |
| ACCCACATCATCAAACAGGA+AGG | 0.673105 | 3.1:-91274466 | None:intergenic |
| CACGCAGAGAAATTAGCAGT+AGG | 0.674502 | 3.1:-91275283 | None:intergenic |
| ATAAAGCATCCACCCATCTG+CGG | 0.685814 | 3.1:-91275943 | None:intergenic |
| AGTATGAGATCCAGATGCTG+CGG | 0.691680 | 3.1:-91275991 | None:intergenic |
| AATTTCACAGCAAAACCTCG+AGG | 0.694899 | 3.1:-91273706 | None:intergenic |
| CTGCTGGTAACTATCCTGAG+TGG | 0.697296 | 3.1:+91274685 | MS.gene52766:CDS |
| AGACACTTCACACCACATGT+GGG | 0.702081 | 3.1:-91274588 | None:intergenic |
| TCATCCGAGTAATATACACC+AGG | 0.707390 | 3.1:-91274897 | None:intergenic |
| GAAGAGGCCATTAAGGTGGG+AGG | 0.707656 | 3.1:+91274618 | MS.gene52766:CDS |
| TCTCTTATGCTGATTCACAG+AGG | 0.708120 | 3.1:+91274943 | MS.gene52766:CDS |
| TCACCACAACAATCACCATG+AGG | 0.719886 | 3.1:+91275019 | MS.gene52766:CDS |
| TGTAACTAAGACTTGGCCTG+AGG | 0.723437 | 3.1:+91274770 | MS.gene52766:CDS |
| GAAACCTTGAGAGACCCTCG+AGG | 0.734649 | 3.1:+91273691 | MS.gene52766:CDS |
| TGTGAAATTCTACACCAGAG+AGG | 0.748378 | 3.1:+91273720 | MS.gene52766:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAACATTTTTTTTTTAAATA+AGG | - | chr3.1:91275415-91275434 | None:intergenic | 10.0% |
| !!! | TCAATTTGTTTTTTTTTTTT+TGG | + | chr3.1:91272320-91272339 | MS.gene52766:intron | 10.0% |
| !! | AAAAGAATAATTCAAAGATA+TGG | - | chr3.1:91272543-91272562 | None:intergenic | 15.0% |
| !! | CATCAAATAAGATAAAAAAA+GGG | - | chr3.1:91272509-91272528 | None:intergenic | 15.0% |
| !! | TAGCATTTAATTAAACAATT+TGG | + | chr3.1:91273943-91273962 | MS.gene52766:intron | 15.0% |
| !! | TCATCAAATAAGATAAAAAA+AGG | - | chr3.1:91272510-91272529 | None:intergenic | 15.0% |
| !! | TGATATATGATAGAATATTA+TGG | + | chr3.1:91272826-91272845 | MS.gene52766:intron | 15.0% |
| !! | TTTAATTAAATGCTACATTT+GGG | - | chr3.1:91273938-91273957 | None:intergenic | 15.0% |
| !!! | ATTTTCATAAACCATAATAA+TGG | + | chr3.1:91272922-91272941 | MS.gene52766:intron | 15.0% |
| !! | AAAAATATATGATCTTTCGT+TGG | + | chr3.1:91275499-91275518 | MS.gene52766:intron | 20.0% |
| !! | ATAAGATGTAATATCACATT+TGG | - | chr3.1:91275154-91275173 | None:intergenic | 20.0% |
| !! | GTTTAAACAATACCTATATT+GGG | + | chr3.1:91275715-91275734 | MS.gene52766:intron | 20.0% |
| !! | GTTTAATTAAATGCTACATT+TGG | - | chr3.1:91273939-91273958 | None:intergenic | 20.0% |
| !! | TAATTAAACAATTTGGTCTA+GGG | + | chr3.1:91273950-91273969 | MS.gene52766:intron | 20.0% |
| !! | TGTTAAATTATACGATTTCA+CGG | + | chr3.1:91272600-91272619 | MS.gene52766:intron | 20.0% |
| !! | TGTTTAAACAATACCTATAT+TGG | + | chr3.1:91275714-91275733 | MS.gene52766:intron | 20.0% |
| !! | TTAATTAAACAATTTGGTCT+AGG | + | chr3.1:91273949-91273968 | MS.gene52766:intron | 20.0% |
| !! | TTAATTAAATGCTACATTTG+GGG | - | chr3.1:91273937-91273956 | None:intergenic | 20.0% |
| !! | TTGAAATTTCAAAGTACAAA+GGG | - | chr3.1:91274050-91274069 | None:intergenic | 20.0% |
| !! | TTTAAACAATACCTATATTG+GGG | + | chr3.1:91275716-91275735 | MS.gene52766:intron | 20.0% |
| !!! | GACAATAATTGTTTTAAAAG+AGG | + | chr3.1:91274213-91274232 | MS.gene52766:intron | 20.0% |
| !!! | TAAGAATACTTCACAAATTT+TGG | - | chr3.1:91275466-91275485 | None:intergenic | 20.0% |
| !!! | TGCAAATTAATTTGAAGTTT+AGG | + | chr3.1:91275594-91275613 | MS.gene52766:intron | 20.0% |
| !!! | TTATATTATTTTACCCCTTT+TGG | + | chr3.1:91273438-91273457 | MS.gene52766:intron | 20.0% |
| !!! | TTTGAAATTTCAAAGTACAA+AGG | - | chr3.1:91274051-91274070 | None:intergenic | 20.0% |
| ! | AAGTTATGATATGTCATAAC+TGG | - | chr3.1:91273174-91273193 | None:intergenic | 25.0% |
| ! | ACCAACTTAATATTTAACCA+AGG | - | chr3.1:91275575-91275594 | None:intergenic | 25.0% |
| ! | ACCTTGGTTAAATATTAAGT+TGG | + | chr3.1:91275571-91275590 | MS.gene52766:intron | 25.0% |
| ! | CAGTTATATCAAAAACAGTT+AGG | - | chr3.1:91273063-91273082 | None:intergenic | 25.0% |
| ! | CTTGCATATAAGTTATAAAC+GGG | + | chr3.1:91272769-91272788 | MS.gene52766:intron | 25.0% |
| ! | GAAGTAATTGACCTATAAAA+TGG | - | chr3.1:91275218-91275237 | None:intergenic | 25.0% |
| ! | GATATAACTGAAGCTATAAT+GGG | + | chr3.1:91273073-91273092 | MS.gene52766:intron | 25.0% |
| ! | GCTTGCATATAAGTTATAAA+CGG | + | chr3.1:91272768-91272787 | MS.gene52766:intron | 25.0% |
| ! | TATAAAATAAATGACGAGTG+AGG | + | chr3.1:91275666-91275685 | MS.gene52766:intron | 25.0% |
| ! | TATTGTTTAAACAGCTTTAC+TGG | - | chr3.1:91275707-91275726 | None:intergenic | 25.0% |
| ! | TCATAAACTCTCCATTATTA+TGG | - | chr3.1:91272936-91272955 | None:intergenic | 25.0% |
| ! | TGATATAACTGAAGCTATAA+TGG | + | chr3.1:91273072-91273091 | MS.gene52766:intron | 25.0% |
| ! | TTAATATTTAACCAAGGTAG+TGG | - | chr3.1:91275569-91275588 | None:intergenic | 25.0% |
| ! | TTTCATGAATTTCATTCACA+GGG | + | chr3.1:91275043-91275062 | MS.gene52766:CDS | 25.0% |
| !! | TCATATCAGTATTTTGTAAC+AGG | - | chr3.1:91275847-91275866 | None:intergenic | 25.0% |
| !!! | TTGTTTTAAAAGAGGTGATA+TGG | + | chr3.1:91274221-91274240 | MS.gene52766:intron | 25.0% |
| AAGTCTTAGTTACATCAAGT+GGG | - | chr3.1:91274764-91274783 | None:intergenic | 30.0% | |
| AGCATATGAGCAAATAAGTA+GGG | - | chr3.1:91276088-91276107 | None:intergenic | 30.0% | |
| ATCTTTACCTTCTAATCACA+GGG | + | chr3.1:91274276-91274295 | MS.gene52766:intron | 30.0% | |
| ATGTTATTATGAGCAGCTTA+TGG | + | chr3.1:91273134-91273153 | MS.gene52766:intron | 30.0% | |
| CGAGTGACTAAATATAACTA+TGG | + | chr3.1:91274111-91274130 | MS.gene52766:intron | 30.0% | |
| GCAATCAATCGTAAAAATCA+CGG | - | chr3.1:91275388-91275407 | None:intergenic | 30.0% | |
| GGCGTGGTTTATATAAAAAT+TGG | - | chr3.1:91273275-91273294 | None:intergenic | 30.0% | |
| GTATTGTTGTATACCTTGTA+TGG | - | chr3.1:91272192-91272211 | None:intergenic | 30.0% | |
| GTTTCATGAATTTCATTCAC+AGG | + | chr3.1:91275042-91275061 | MS.gene52766:CDS | 30.0% | |
| TAACAGTGATTAAACTTTGC+TGG | - | chr3.1:91272585-91272604 | None:intergenic | 30.0% | |
| TATCTTGCCTGAAAAGATTA+AGG | - | chr3.1:91275916-91275935 | None:intergenic | 30.0% | |
| TATCTTTACCTTCTAATCAC+AGG | + | chr3.1:91274275-91274294 | MS.gene52766:intron | 30.0% | |
| TATTTAGTCGCTAGAAGATA+TGG | - | chr3.1:91273782-91273801 | None:intergenic | 30.0% | |
| TCGTAATTAGTTATCACCAT+TGG | + | chr3.1:91273326-91273345 | MS.gene52766:intron | 30.0% | |
| TGATAATCTTCCAAGAGAAT+TGG | - | chr3.1:91273469-91273488 | None:intergenic | 30.0% | |
| TGATCAACATGAATTGTGTT+TGG | + | chr3.1:91275864-91275883 | MS.gene52766:intron | 30.0% | |
| TGTAAAGTTCAGGGTTAATT+TGG | + | chr3.1:91273383-91273402 | MS.gene52766:intron | 30.0% | |
| TTCATTAATTTCTACCTCTC+TGG | - | chr3.1:91273737-91273756 | None:intergenic | 30.0% | |
| ! | TATCACATTTGGAGTTATCA+TGG | - | chr3.1:91275143-91275162 | None:intergenic | 30.0% |
| ! | TATCGAAACTAACCTTTTCA+CGG | - | chr3.1:91275309-91275328 | None:intergenic | 30.0% |
| ! | TTCTTTGCCTTAATCTTTTC+AGG | + | chr3.1:91275906-91275925 | MS.gene52766:intron | 30.0% |
| !! | ATGTTATCAGCTGTTTTCAT+AGG | + | chr3.1:91272982-91273001 | MS.gene52766:intron | 30.0% |
| !! | GTTTGGTGATGTCTAATATT+TGG | + | chr3.1:91275881-91275900 | MS.gene52766:intron | 30.0% |
| !! | TCGTACATGTGATACTTTTT+AGG | - | chr3.1:91273012-91273031 | None:intergenic | 30.0% |
| !! | TTGGTTGTTTCTAAAATGTG+TGG | - | chr3.1:91275447-91275466 | None:intergenic | 30.0% |
| !!! | GTGTTGTCTTCAATTTTTTC+AGG | - | chr3.1:91273993-91274012 | None:intergenic | 30.0% |
| AAAAGCTTGCCCAATTTGAT+AGG | + | chr3.1:91273497-91273516 | MS.gene52766:CDS | 35.0% | |
| AAAGCTTGCCCAATTTGATA+GGG | + | chr3.1:91273498-91273517 | MS.gene52766:CDS | 35.0% | |
| AAAGTTACCCTGTGATTAGA+AGG | - | chr3.1:91274286-91274305 | None:intergenic | 35.0% | |
| AACAATTTGGTCTAGGGATT+TGG | + | chr3.1:91273956-91273975 | MS.gene52766:intron | 35.0% | |
| AAGTAAATACACTAGCATCC+TGG | - | chr3.1:91274186-91274205 | None:intergenic | 35.0% | |
| AATAAGCTGAAAACAGCTCA+TGG | + | chr3.1:91272957-91272976 | MS.gene52766:intron | 35.0% | |
| AGAGAAATTAGCAGTAGGAA+TGG | - | chr3.1:91275281-91275300 | None:intergenic | 35.0% | |
| AGATATACCTCTAGATCCAA+CGG | - | chr3.1:91272464-91272483 | None:intergenic | 35.0% | |
| ATATACACCAGGCACAATAA+TGG | - | chr3.1:91274889-91274908 | None:intergenic | 35.0% | |
| ATCAGCATAAGAGAAAATCC+TGG | - | chr3.1:91274937-91274956 | None:intergenic | 35.0% | |
| ATGATAAGATGCTTCAAACC+AGG | + | chr3.1:91274916-91274935 | MS.gene52766:CDS | 35.0% | |
| CAAGTCTTAGTTACATCAAG+TGG | - | chr3.1:91274765-91274784 | None:intergenic | 35.0% | |
| CACTTGATGTAACTAAGACT+TGG | + | chr3.1:91274763-91274782 | MS.gene52766:CDS | 35.0% | |
| CATACATTCTTCCCCAATAT+AGG | - | chr3.1:91275730-91275749 | None:intergenic | 35.0% | |
| CATCTGTCTTGTAAAGTTCA+GGG | + | chr3.1:91273374-91273393 | MS.gene52766:intron | 35.0% | |
| CATGTGATTAAGGTCATGTT+TGG | + | chr3.1:91272660-91272679 | MS.gene52766:intron | 35.0% | |
| CTTGGAAGATTATCATCTTG+TGG | + | chr3.1:91273474-91273493 | MS.gene52766:CDS | 35.0% | |
| GAAAGTGAGAAAAGAAGTCA+AGG | - | chr3.1:91274425-91274444 | None:intergenic | 35.0% | |
| GAGAAATTAGCAGTAGGAAT+GGG | - | chr3.1:91275280-91275299 | None:intergenic | 35.0% | |
| GAGCATATGAGCAAATAAGT+AGG | - | chr3.1:91276089-91276108 | None:intergenic | 35.0% | |
| TCAACTAAGCCTATACAAAC+AGG | + | chr3.1:91273037-91273056 | MS.gene52766:intron | 35.0% | |
| TGAAATTCATGAAACCCTCA+TGG | - | chr3.1:91275037-91275056 | None:intergenic | 35.0% | |
| TGACAAAGAAGCAGAGAAAT+AGG | + | chr3.1:91275542-91275561 | MS.gene52766:intron | 35.0% | |
| TGGATGTCATAACGTTAAAC+TGG | - | chr3.1:91272638-91272657 | None:intergenic | 35.0% | |
| TTAAGCAACTCCAGTTTAGT+TGG | + | chr3.1:91273850-91273869 | MS.gene52766:intron | 35.0% | |
| TTTGCTCATATGCTCTTTGT+TGG | + | chr3.1:91276094-91276113 | MS.gene52766:intron | 35.0% | |
| ! | ATTTTGTAACAGGAACCTGT+CGG | - | chr3.1:91275837-91275856 | None:intergenic | 35.0% |
| ! | CACCATTGGTAATTACAACT+TGG | + | chr3.1:91273340-91273359 | MS.gene52766:intron | 35.0% |
| !! | ATTATTTTACCCCTTTTGGC+AGG | + | chr3.1:91273442-91273461 | MS.gene52766:intron | 35.0% |
| !! | CCAGTTTAGTTGGTAAAATG+CGG | + | chr3.1:91273860-91273879 | MS.gene52766:intron | 35.0% |
| AAGAGGTGATATGGAACAGT+TGG | + | chr3.1:91274230-91274249 | MS.gene52766:intron | 40.0% | |
| AAGATAGATTTCTCCGCAGA+TGG | + | chr3.1:91275930-91275949 | MS.gene52766:CDS | 40.0% | |
| AAGTAGTTGCAGTTGTAACC+AGG | + | chr3.1:91274165-91274184 | MS.gene52766:intron | 40.0% | |
| AATTTCACAGCAAAACCTCG+AGG | - | chr3.1:91273709-91273728 | None:intergenic | 40.0% | |
| ACAAAGGGTTTAGACAATGC+TGG | - | chr3.1:91274035-91274054 | None:intergenic | 40.0% | |
| ACAGTTAGGCCTGTTTGTAT+AGG | - | chr3.1:91273049-91273068 | None:intergenic | 40.0% | |
| AGATAGATTTCTCCGCAGAT+GGG | + | chr3.1:91275931-91275950 | MS.gene52766:CDS | 40.0% | |
| AGGTCAATTACTTCCCTTCA+AGG | + | chr3.1:91275224-91275243 | MS.gene52766:intron | 40.0% | |
| ATCGTAAAAATCACGGCTGA+TGG | - | chr3.1:91275381-91275400 | None:intergenic | 40.0% | |
| ATTTCACAGCAAAACCTCGA+GGG | - | chr3.1:91273708-91273727 | None:intergenic | 40.0% | |
| CAAGATTATAGGCACATGGA+TGG | + | chr3.1:91274495-91274514 | MS.gene52766:CDS | 40.0% | |
| CACATATTCCCTGATCAACA+AGG | + | chr3.1:91274530-91274549 | MS.gene52766:CDS | 40.0% | |
| CAGCAGCAATTGAATCATAC+AGG | - | chr3.1:91274671-91274690 | None:intergenic | 40.0% | |
| CAGTGTACGTGAAATTTCAC+TGG | + | chr3.1:91274562-91274581 | MS.gene52766:CDS | 40.0% | |
| CATGACCTTAATCACATGCA+TGG | - | chr3.1:91272658-91272677 | None:intergenic | 40.0% | |
| CCAGAATTTGTAGTCCAGAA+AGG | - | chr3.1:91272409-91272428 | None:intergenic | 40.0% | |
| CCATCTGTCTTGTAAAGTTC+AGG | + | chr3.1:91273373-91273392 | MS.gene52766:intron | 40.0% | |
| CCATGTGCCTATAATCTTGT+GGG | - | chr3.1:91274494-91274513 | None:intergenic | 40.0% | |
| CCTGAACTTTACAAGACAGA+TGG | - | chr3.1:91273376-91273395 | None:intergenic | 40.0% | |
| CCTTTCTGGACTACAAATTC+TGG | + | chr3.1:91272406-91272425 | MS.gene52766:CDS | 40.0% | |
| CGCCAAGTTGTAATTACCAA+TGG | - | chr3.1:91273345-91273364 | None:intergenic | 40.0% | |
| CTATGTTCTTGTTCAAGACC+AGG | - | chr3.1:91274824-91274843 | None:intergenic | 40.0% | |
| CTGTATGATTCAATTGCTGC+TGG | + | chr3.1:91274669-91274688 | MS.gene52766:CDS | 40.0% | |
| GAACAGGATCATACCTTGAA+GGG | - | chr3.1:91275240-91275259 | None:intergenic | 40.0% | |
| GAAGACAACACATGCATTGT+TGG | + | chr3.1:91274002-91274021 | MS.gene52766:intron | 40.0% | |
| GACATCCATGCATGTGATTA+AGG | + | chr3.1:91272650-91272669 | MS.gene52766:intron | 40.0% | |
| GATCCGTTCCCTATCAAATT+GGG | - | chr3.1:91273509-91273528 | None:intergenic | 40.0% | |
| GCCACATTTAGTTGAGTACT+GGG | + | chr3.1:91273292-91273311 | MS.gene52766:intron | 40.0% | |
| TCAAATTTGTCTTCGTGAGC+AGG | - | chr3.1:91274735-91274754 | None:intergenic | 40.0% | |
| TCATCCGAGTAATATACACC+AGG | - | chr3.1:91274900-91274919 | None:intergenic | 40.0% | |
| TCCATGTGCCTATAATCTTG+TGG | - | chr3.1:91274495-91274514 | None:intergenic | 40.0% | |
| TCTACTGTCATTCATGAACG+TGG | + | chr3.1:91273661-91273680 | MS.gene52766:CDS | 40.0% | |
| TGAACAAACAGTTTCCACTC+AGG | - | chr3.1:91274702-91274721 | None:intergenic | 40.0% | |
| TGCTTGAAGTTGTTCTGCTT+TGG | - | chr3.1:91275785-91275804 | None:intergenic | 40.0% | |
| TGTGAAATTCTACACCAGAG+AGG | + | chr3.1:91273720-91273739 | MS.gene52766:CDS | 40.0% | |
| TGTGCCTGGTGTATATTACT+CGG | + | chr3.1:91274893-91274912 | MS.gene52766:CDS | 40.0% | |
| TTAGCACACATGCAGCAATT+GGG | - | chr3.1:91273238-91273257 | None:intergenic | 40.0% | |
| TTGCATCTCATCTGAACATG+AGG | + | chr3.1:91276155-91276174 | MS.gene52766:CDS | 40.0% | |
| TTGCCCAATTTGATAGGGAA+CGG | + | chr3.1:91273503-91273522 | MS.gene52766:CDS | 40.0% | |
| TTTCATTCACAGGGATGAAG+AGG | + | chr3.1:91275052-91275071 | MS.gene52766:CDS | 40.0% | |
| ! | CAGGAAAGTTGTTTCCAACA+AGG | - | chr3.1:91274311-91274330 | None:intergenic | 40.0% |
| ! | CCACATTTAGTTGAGTACTG+GGG | + | chr3.1:91273293-91273312 | MS.gene52766:intron | 40.0% |
| ! | CCGCATTTTACCAACTAAAC+TGG | - | chr3.1:91273863-91273882 | None:intergenic | 40.0% |
| ! | CGGGATGAATTTTCCAGATA+TGG | + | chr3.1:91274347-91274366 | MS.gene52766:CDS | 40.0% |
| ! | TATAGGCACATGGATGGTTT+TGG | + | chr3.1:91274501-91274520 | MS.gene52766:CDS | 40.0% |
| ! | TTAAGAGCATGGACCATATC+TGG | - | chr3.1:91274363-91274382 | None:intergenic | 40.0% |
| ! | TTTTGTAACAGGAACCTGTC+GGG | - | chr3.1:91275836-91275855 | None:intergenic | 40.0% |
| !! | CTAGAAACTTTAGAGCAGTC+AGG | + | chr3.1:91276051-91276070 | MS.gene52766:intron | 40.0% |
| !! | TCCTTCCTGTTTGATGATGT+GGG | + | chr3.1:91274465-91274484 | MS.gene52766:CDS | 40.0% |
| !! | TCTCTTATGCTGATTCACAG+AGG | + | chr3.1:91274943-91274962 | MS.gene52766:CDS | 40.0% |
| !!! | CTTGAGCTCTGCCATTTTAT+AGG | + | chr3.1:91275204-91275223 | MS.gene52766:intron | 40.0% |
| !!! | CTTTGTTGGTTTTGCTATGC+AGG | + | chr3.1:91276108-91276127 | MS.gene52766:intron | 40.0% |
| AACCCTCATGGTGATTGTTG+TGG | - | chr3.1:91275025-91275044 | None:intergenic | 45.0% | |
| ACAGGAAGGAGAACATGTGA+AGG | - | chr3.1:91274455-91274474 | None:intergenic | 45.0% | |
| ACCCACATCATCAAACAGGA+AGG | - | chr3.1:91274469-91274488 | None:intergenic | 45.0% | |
| ACCTCTAGATCCAACGGTTA+GGG | - | chr3.1:91272458-91272477 | None:intergenic | 45.0% | |
| AGAATTGGACCTGCCAAAAG+GGG | - | chr3.1:91273454-91273473 | None:intergenic | 45.0% | |
| AGACACTTCACACCACATGT+GGG | - | chr3.1:91274591-91274610 | None:intergenic | 45.0% | |
| AGAGAATTGGACCTGCCAAA+AGG | - | chr3.1:91273456-91273475 | None:intergenic | 45.0% | |
| AGCAATTGGGAGGGTTTACT+TGG | - | chr3.1:91273225-91273244 | None:intergenic | 45.0% | |
| AGTATGAGATCCAGATGCTG+CGG | - | chr3.1:91275994-91276013 | None:intergenic | 45.0% | |
| ATTCCCTGATCAACAAGGCT+GGG | + | chr3.1:91274535-91274554 | MS.gene52766:CDS | 45.0% | |
| ATTGTTGTGGTGAGCACACT+TGG | - | chr3.1:91275012-91275031 | None:intergenic | 45.0% | |
| CAAATTCTGGTGCACCTGTT+TGG | + | chr3.1:91272419-91272438 | MS.gene52766:CDS | 45.0% | |
| CAAGGATTCTCCAATTCTCC+TGG | - | chr3.1:91274407-91274426 | None:intergenic | 45.0% | |
| CACCACAACAATCACCATGA+GGG | + | chr3.1:91275020-91275039 | MS.gene52766:CDS | 45.0% | |
| CACGCAGAGAAATTAGCAGT+AGG | - | chr3.1:91275286-91275305 | None:intergenic | 45.0% | |
| CAGGGTAACTTTGACCTTGT+TGG | + | chr3.1:91274294-91274313 | MS.gene52766:intron | 45.0% | |
| CATACAGGTCTTGAGTAGCA+TGG | - | chr3.1:91274656-91274675 | None:intergenic | 45.0% | |
| CCCACAAGATTATAGGCACA+TGG | + | chr3.1:91274491-91274510 | MS.gene52766:CDS | 45.0% | |
| CCCCAGTACTCAACTAAATG+TGG | - | chr3.1:91273296-91273315 | None:intergenic | 45.0% | |
| CCTGTCTTCTTCGTTCATGA+CGG | + | chr3.1:91274327-91274346 | MS.gene52766:CDS | 45.0% | |
| CGAACAGGATCATACCTTGA+AGG | - | chr3.1:91275241-91275260 | None:intergenic | 45.0% | |
| CGCCACATTTAGTTGAGTAC+TGG | + | chr3.1:91273291-91273310 | MS.gene52766:intron | 45.0% | |
| CTGTCTTCTTCGTTCATGAC+GGG | + | chr3.1:91274328-91274347 | MS.gene52766:CDS | 45.0% | |
| GAAAGGAGAATTGTAAGCGC+TGG | - | chr3.1:91272392-91272411 | None:intergenic | 45.0% | |
| GAGAAATAGGTCCACTACCT+TGG | + | chr3.1:91275555-91275574 | MS.gene52766:intron | 45.0% | |
| GAGAACATGTGAAGGCTTTC+TGG | - | chr3.1:91274447-91274466 | None:intergenic | 45.0% | |
| GAGAATTGGACCTGCCAAAA+GGG | - | chr3.1:91273455-91273474 | None:intergenic | 45.0% | |
| GCAGGAAGTTGCAGATAGTT+TGG | - | chr3.1:91274981-91275000 | None:intergenic | 45.0% | |
| GCGCTTACAATTCTCCTTTC+TGG | + | chr3.1:91272392-91272411 | MS.gene52766:CDS | 45.0% | |
| GGATCCGTTCCCTATCAAAT+TGG | - | chr3.1:91273510-91273529 | None:intergenic | 45.0% | |
| GTACTCAACTAAATGTGGCG+TGG | - | chr3.1:91273291-91273310 | None:intergenic | 45.0% | |
| GTAGAGAAACGCACAATGAC+AGG | - | chr3.1:91273646-91273665 | None:intergenic | 45.0% | |
| GTAGGAAATCTGCACAAGTC+AGG | - | chr3.1:91273603-91273622 | None:intergenic | 45.0% | |
| GTTAGCACACATGCAGCAAT+TGG | - | chr3.1:91273239-91273258 | None:intergenic | 45.0% | |
| TACCTCTAGATCCAACGGTT+AGG | - | chr3.1:91272459-91272478 | None:intergenic | 45.0% | |
| TATTCCCTGATCAACAAGGC+TGG | + | chr3.1:91274534-91274553 | MS.gene52766:CDS | 45.0% | |
| TCACCACAACAATCACCATG+AGG | + | chr3.1:91275019-91275038 | MS.gene52766:CDS | 45.0% | |
| TCCTGTTCGTCATGCAGAAA+AGG | + | chr3.1:91275252-91275271 | MS.gene52766:CDS | 45.0% | |
| TCTCCAATTCTCCTGGATGT+GGG | - | chr3.1:91274400-91274419 | None:intergenic | 45.0% | |
| TGGGTGTCCCACAAGATTAT+AGG | + | chr3.1:91274484-91274503 | MS.gene52766:CDS | 45.0% | |
| TGTAACTAAGACTTGGCCTG+AGG | + | chr3.1:91274770-91274789 | MS.gene52766:CDS | 45.0% | |
| TTCTCCAATTCTCCTGGATG+TGG | - | chr3.1:91274401-91274420 | None:intergenic | 45.0% | |
| TTGTTGTGGTGAGCACACTT+GGG | - | chr3.1:91275011-91275030 | None:intergenic | 45.0% | |
| TTTGGCAGGTCCAATTCTCT+TGG | + | chr3.1:91273456-91273475 | MS.gene52766:intron | 45.0% | |
| ! | AAGCCTTATCCCACTATGTG+GGG | - | chr3.1:91272875-91272894 | None:intergenic | 45.0% |
| ! | ACCTTTTCTGCATGACGAAC+AGG | - | chr3.1:91275256-91275275 | None:intergenic | 45.0% |
| ! | ATAAAGCATCCACCCATCTG+CGG | - | chr3.1:91275946-91275965 | None:intergenic | 45.0% |
| ! | ATAGTGGGATAAGGCTTGGT+TGG | + | chr3.1:91272878-91272897 | MS.gene52766:intron | 45.0% |
| ! | ATGTGGTGTGAAGTGTCTGT+TGG | + | chr3.1:91274593-91274612 | MS.gene52766:CDS | 45.0% |
| ! | ATTCACAGAGGCACAGACTT+GGG | + | chr3.1:91274955-91274974 | MS.gene52766:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTATGT+GGG | - | chr3.1:91272876-91272895 | None:intergenic | 45.0% |
| ! | GAGGAGTTGTTGTTCCAAAC+AGG | - | chr3.1:91272436-91272455 | None:intergenic | 45.0% |
| ! | TGAAGGGGTATAATGTCCTC+AGG | - | chr3.1:91274789-91274808 | None:intergenic | 45.0% |
| !! | AATTGTAAGCGCTGGATGGA+CGG | - | chr3.1:91272384-91272403 | None:intergenic | 45.0% |
| !! | CTCCTTCCTGTTTGATGATG+TGG | + | chr3.1:91274464-91274483 | MS.gene52766:CDS | 45.0% |
| !! | TTTCCCAGCCTTGTTGATCA+GGG | - | chr3.1:91274541-91274560 | None:intergenic | 45.0% |
| AAAACCTCGAGGGTCTCTCA+AGG | - | chr3.1:91273698-91273717 | None:intergenic | 50.0% | |
| AACAACTCCTCCCTAACCGT+TGG | + | chr3.1:91272445-91272464 | MS.gene52766:CDS | 50.0% | |
| ACACCAGGCACAATAATGGC+AGG | - | chr3.1:91274885-91274904 | None:intergenic | 50.0% | |
| AGAACGTGTTGTCCATGCCA+GGG | + | chr3.1:91273531-91273550 | MS.gene52766:CDS | 50.0% | |
| AGTCCCACATCCAGGAGAAT+TGG | + | chr3.1:91274394-91274413 | MS.gene52766:CDS | 50.0% | |
| ATGACAGGTGTCTGAACTCC+AGG | - | chr3.1:91273631-91273650 | None:intergenic | 50.0% | |
| ATGCAGGCTGATCGATCTCT+TGG | + | chr3.1:91276124-91276143 | MS.gene52766:intron | 50.0% | |
| ATTATACCCCTTCAGCCCGT+AGG | + | chr3.1:91274795-91274814 | MS.gene52766:CDS | 50.0% | |
| ATTCTCCTGGATGTGGGACT+TGG | - | chr3.1:91274394-91274413 | None:intergenic | 50.0% | |
| CACACATGCAGCAATTGGGA+GGG | - | chr3.1:91273234-91273253 | None:intergenic | 50.0% | |
| CAGAACAACTTCAAGCAGCC+TGG | + | chr3.1:91275788-91275807 | MS.gene52766:CDS | 50.0% | |
| CAGACACTTCACACCACATG+TGG | - | chr3.1:91274592-91274611 | None:intergenic | 50.0% | |
| CCAGATGCTGCGGATTTCAT+GGG | - | chr3.1:91275984-91276003 | None:intergenic | 50.0% | |
| CCGTCATGAACGAAGAAGAC+AGG | - | chr3.1:91274330-91274349 | None:intergenic | 50.0% | |
| CTGCTGGTAACTATCCTGAG+TGG | + | chr3.1:91274685-91274704 | MS.gene52766:CDS | 50.0% | |
| CTTATCCCACTATGTGGGGT+CGG | - | chr3.1:91272871-91272890 | None:intergenic | 50.0% | |
| GAGGAAGAGGCCATTAAGGT+GGG | + | chr3.1:91274615-91274634 | MS.gene52766:CDS | 50.0% | |
| GAGGGTCTCTCAAGGTTTCA+GGG | - | chr3.1:91273690-91273709 | None:intergenic | 50.0% | |
| GCAGCATCTGGATCTCATAC+TGG | + | chr3.1:91275993-91276012 | MS.gene52766:CDS | 50.0% | |
| GGACACCCACATCATCAAAC+AGG | - | chr3.1:91274473-91274492 | None:intergenic | 50.0% | |
| GTTGGAGGAAGAGGCCATTA+AGG | + | chr3.1:91274611-91274630 | MS.gene52766:CDS | 50.0% | |
| GTTGGATCCTCCCACCTTAA+TGG | - | chr3.1:91274628-91274647 | None:intergenic | 50.0% | |
| TAGATTTCTCCGCAGATGGG+TGG | + | chr3.1:91275934-91275953 | MS.gene52766:CDS | 50.0% | |
| TCCAGATGCTGCGGATTTCA+TGG | - | chr3.1:91275985-91276004 | None:intergenic | 50.0% | |
| TCCCTAACCGTTGGATCTAG+AGG | + | chr3.1:91272454-91272473 | MS.gene52766:CDS | 50.0% | |
| TCTAGATCCAACGGTTAGGG+AGG | - | chr3.1:91272455-91272474 | None:intergenic | 50.0% | |
| TGGAGAGCGATACCGATCTT+GGG | + | chr3.1:91275808-91275827 | MS.gene52766:CDS | 50.0% | |
| TGGCATGGACAACACGTTCT+GGG | - | chr3.1:91273531-91273550 | None:intergenic | 50.0% | |
| TGGGGTTGGGTTTAAGAGCA+TGG | - | chr3.1:91274374-91274393 | None:intergenic | 50.0% | |
| TGTCCTGCCATTATTGTGCC+TGG | + | chr3.1:91274879-91274898 | MS.gene52766:CDS | 50.0% | |
| TTCTCCTGGATGTGGGACTT+GGG | - | chr3.1:91274393-91274412 | None:intergenic | 50.0% | |
| TTGAGTAGCATGGCTGTGGT+TGG | - | chr3.1:91274646-91274665 | None:intergenic | 50.0% | |
| TTTCACTGGAAGCCCACATG+TGG | + | chr3.1:91274576-91274595 | MS.gene52766:CDS | 50.0% | |
| TTTCTCTGCGTGCCGTGAAA+AGG | + | chr3.1:91275294-91275313 | MS.gene52766:CDS | 50.0% | |
| ! | CCAAGCCTTATCCCACTATG+TGG | - | chr3.1:91272877-91272896 | None:intergenic | 50.0% |
| ! | CCACATAGTGGGATAAGGCT+TGG | + | chr3.1:91272874-91272893 | MS.gene52766:intron | 50.0% |
| ! | CTGGATCTCATACTGGTCTC+AGG | + | chr3.1:91276000-91276019 | MS.gene52766:CDS | 50.0% |
| ! | GAAGTGTCTGTTGGAGGAAG+AGG | + | chr3.1:91274602-91274621 | MS.gene52766:CDS | 50.0% |
| ! | GATTCACAGAGGCACAGACT+TGG | + | chr3.1:91274954-91274973 | MS.gene52766:CDS | 50.0% |
| ! | TGGTGTGAAGTGTCTGTTGG+AGG | + | chr3.1:91274596-91274615 | MS.gene52766:CDS | 50.0% |
| !! | CTTTCCCAGCCTTGTTGATC+AGG | - | chr3.1:91274542-91274561 | None:intergenic | 50.0% |
| !! | GGAGAATTGTAAGCGCTGGA+TGG | - | chr3.1:91272388-91272407 | None:intergenic | 50.0% |
| ACTATGTGGGGTCGGCTACA+TGG | - | chr3.1:91272863-91272882 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACATAG+TGG | + | chr3.1:91272862-91272881 | MS.gene52766:intron | 55.0% | |
| CAAGATCGGTATCGCTCTCC+AGG | - | chr3.1:91275809-91275828 | None:intergenic | 55.0% | |
| CAGAACGTGTTGTCCATGCC+AGG | + | chr3.1:91273530-91273549 | MS.gene52766:CDS | 55.0% | |
| CCCATGAAATCCGCAGCATC+TGG | + | chr3.1:91275981-91276000 | MS.gene52766:CDS | 55.0% | |
| CGAGGGTCTCTCAAGGTTTC+AGG | - | chr3.1:91273691-91273710 | None:intergenic | 55.0% | |
| CTGGAGAGCGATACCGATCT+TGG | + | chr3.1:91275807-91275826 | MS.gene52766:CDS | 55.0% | |
| CTGGCATGGACAACACGTTC+TGG | - | chr3.1:91273532-91273551 | None:intergenic | 55.0% | |
| GAAACCTTGAGAGACCCTCG+AGG | + | chr3.1:91273691-91273710 | MS.gene52766:CDS | 55.0% | |
| GAACGTGTTGTCCATGCCAG+GGG | + | chr3.1:91273532-91273551 | MS.gene52766:CDS | 55.0% | |
| GAAGAGGCCATTAAGGTGGG+AGG | + | chr3.1:91274618-91274637 | MS.gene52766:CDS | 55.0% | |
| GCACACATGCAGCAATTGGG+AGG | - | chr3.1:91273235-91273254 | None:intergenic | 55.0% | |
| GCAGATTTCCTACGAGCTCC+TGG | + | chr3.1:91273610-91273629 | MS.gene52766:CDS | 55.0% | |
| GGAGGAAGAGGCCATTAAGG+TGG | + | chr3.1:91274614-91274633 | MS.gene52766:CDS | 55.0% | |
| GGATTTCATGGGTGACGCGT+GGG | - | chr3.1:91275973-91275992 | None:intergenic | 55.0% | |
| GGTCTTGAGTAGCATGGCTG+TGG | - | chr3.1:91274650-91274669 | None:intergenic | 55.0% | |
| GTTCAAGACCAGGCGACCTA+CGG | - | chr3.1:91274814-91274833 | None:intergenic | 55.0% | |
| TCTCCTGGATGTGGGACTTG+GGG | - | chr3.1:91274392-91274411 | None:intergenic | 55.0% | |
| TCTGAACTCCAGGAGCTCGT+AGG | - | chr3.1:91273621-91273640 | None:intergenic | 55.0% | |
| TGGATGTGGGACTTGGGGTT+GGG | - | chr3.1:91274387-91274406 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACATAGT+GGG | + | chr3.1:91272863-91272882 | MS.gene52766:intron | 55.0% | |
| TTCAAGACCAGGCGACCTAC+GGG | - | chr3.1:91274813-91274832 | None:intergenic | 55.0% | |
| ! | CGACCCCACATAGTGGGATA+AGG | + | chr3.1:91272869-91272888 | MS.gene52766:intron | 55.0% |
| !! | GCACACTTGGGAGCATTAGC+AGG | - | chr3.1:91274999-91275018 | None:intergenic | 55.0% |
| ACCCTTTGCACTTGCTCCCC+TGG | - | chr3.1:91273551-91273570 | None:intergenic | 60.0% | |
| ACCTGTCGGGTGCCCAAGAT+CGG | - | chr3.1:91275823-91275842 | None:intergenic | 60.0% | |
| CAACCCCAAGTCCCACATCC+AGG | + | chr3.1:91274386-91274405 | MS.gene52766:CDS | 60.0% | |
| CGGATTTCATGGGTGACGCG+TGG | - | chr3.1:91275974-91275993 | None:intergenic | 60.0% | |
| CTGGATGTGGGACTTGGGGT+TGG | - | chr3.1:91274388-91274407 | None:intergenic | 60.0% | |
| GCCAGGGGAGCAAGTGCAAA+GGG | + | chr3.1:91273547-91273566 | MS.gene52766:CDS | 60.0% | |
| TGCCAGGGGAGCAAGTGCAA+AGG | + | chr3.1:91273546-91273565 | MS.gene52766:CDS | 60.0% | |
| TTCATGGGTGACGCGTGGGT+CGG | - | chr3.1:91275969-91275988 | None:intergenic | 60.0% | |
| TTGCACTTGCTCCCCTGGCA+TGG | - | chr3.1:91273546-91273565 | None:intergenic | 60.0% | |
| ACCGATCTTGGGCACCCGAC+AGG | + | chr3.1:91275819-91275838 | MS.gene52766:CDS | 65.0% | |
| ! | AGGCGACCTACGGGCTGAAG+GGG | - | chr3.1:91274804-91274823 | None:intergenic | 65.0% |
| ! | CAGGCGACCTACGGGCTGAA+GGG | - | chr3.1:91274805-91274824 | None:intergenic | 65.0% |
| CCTTCAGCCCGTAGGTCGCC+TGG | + | chr3.1:91274803-91274822 | MS.gene52766:CDS | 70.0% | |
| ! | CCAGGCGACCTACGGGCTGA+AGG | - | chr3.1:91274806-91274825 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 91272183 | 91276189 | 91272183 | ID=MS.gene52766 |
| chr3.1 | mRNA | 91272183 | 91276189 | 91272183 | ID=MS.gene52766.t1;Parent=MS.gene52766 |
| chr3.1 | exon | 91272183 | 91272197 | 91272183 | ID=MS.gene52766.t1.exon1;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91272183 | 91272197 | 91272183 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91272379 | 91272475 | 91272379 | ID=MS.gene52766.t1.exon2;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91272379 | 91272475 | 91272379 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91273464 | 91273741 | 91273464 | ID=MS.gene52766.t1.exon3;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91273464 | 91273741 | 91273464 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91274297 | 91275073 | 91274297 | ID=MS.gene52766.t1.exon4;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91274297 | 91275073 | 91274297 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91275226 | 91275315 | 91275226 | ID=MS.gene52766.t1.exon5;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91275226 | 91275315 | 91275226 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91275773 | 91275840 | 91275773 | ID=MS.gene52766.t1.exon6;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91275773 | 91275840 | 91275773 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91275928 | 91276021 | 91275928 | ID=MS.gene52766.t1.exon7;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91275928 | 91276021 | 91275928 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| chr3.1 | exon | 91276130 | 91276189 | 91276130 | ID=MS.gene52766.t1.exon8;Parent=MS.gene52766.t1 |
| chr3.1 | CDS | 91276130 | 91276189 | 91276130 | ID=cds.MS.gene52766.t1;Parent=MS.gene52766.t1 |
| Gene Sequence |
| Protein sequence |
