Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53249.t1 | XP_003598051.1 | 96.7 | 271 | 9 | 0 | 3 | 273 | 28 | 298 | 5.80E-148 | 533.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53249.t1 | Q9T0F7 | 70.3 | 239 | 67 | 3 | 36 | 273 | 48 | 283 | 3.6e-98 | 359.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53249.t1 | G7J059 | 96.7 | 271 | 9 | 0 | 3 | 273 | 28 | 298 | 4.2e-148 | 533.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene53249 | 0.866108 | 3.63E-65 | -1.69E-46 |
| MS.gene049418 | MS.gene53249 | 0.817853 | 2.66E-52 | -1.69E-46 |
| MS.gene050649 | MS.gene53249 | 0.816029 | 6.83E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene53249 | 0.811252 | 7.68E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene53249 | 0.884145 | 2.46E-71 | -1.69E-46 |
| MS.gene053581 | MS.gene53249 | 0.806618 | 7.54E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene53249 | 0.874325 | 7.38E-68 | -1.69E-46 |
| MS.gene055423 | MS.gene53249 | 0.815003 | 1.15E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene53249 | 0.805271 | 1.45E-49 | -1.69E-46 |
| MS.gene058206 | MS.gene53249 | 0.823039 | 1.72E-53 | -1.69E-46 |
| MS.gene058722 | MS.gene53249 | 0.829163 | 6.00E-55 | -1.69E-46 |
| MS.gene058945 | MS.gene53249 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene060317 | MS.gene53249 | 0.814731 | 1.33E-51 | -1.69E-46 |
| MS.gene060884 | MS.gene53249 | 0.810324 | 1.22E-50 | -1.69E-46 |
| MS.gene060886 | MS.gene53249 | 0.809464 | 1.87E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53249.t1 | MTR_3g005710 | 98.535 | 273 | 4 | 0 | 1 | 273 | 26 | 298 | 0.0 | 568 |
| MS.gene53249.t1 | MTR_8g080660 | 45.000 | 240 | 118 | 5 | 47 | 272 | 58 | 297 | 1.90e-68 | 214 |
| MS.gene53249.t1 | MTR_3g085270 | 46.977 | 215 | 109 | 4 | 51 | 260 | 60 | 274 | 1.71e-66 | 209 |
| MS.gene53249.t1 | MTR_4g485570 | 42.791 | 215 | 119 | 2 | 52 | 262 | 68 | 282 | 2.47e-58 | 188 |
| MS.gene53249.t1 | MTR_4g485560 | 42.925 | 212 | 117 | 2 | 55 | 262 | 21 | 232 | 3.78e-56 | 181 |
| MS.gene53249.t1 | MTR_7g029100 | 45.588 | 204 | 94 | 3 | 59 | 261 | 79 | 266 | 2.42e-55 | 180 |
| MS.gene53249.t1 | MTR_4g094895 | 38.839 | 224 | 131 | 4 | 41 | 258 | 60 | 283 | 1.12e-50 | 169 |
| MS.gene53249.t1 | MTR_4g102900 | 36.134 | 238 | 142 | 6 | 42 | 273 | 64 | 297 | 7.04e-42 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53249.t1 | AT4G09990 | 70.293 | 239 | 67 | 3 | 36 | 273 | 48 | 283 | 3.06e-128 | 366 |
| MS.gene53249.t1 | AT1G33800 | 67.886 | 246 | 77 | 2 | 28 | 273 | 47 | 290 | 7.27e-128 | 365 |
| MS.gene53249.t1 | AT1G09610 | 65.079 | 252 | 80 | 4 | 27 | 273 | 34 | 282 | 6.07e-122 | 349 |
| MS.gene53249.t1 | AT1G71690 | 58.519 | 270 | 94 | 6 | 9 | 273 | 39 | 295 | 1.15e-110 | 322 |
| MS.gene53249.t1 | AT1G67330 | 50.935 | 214 | 101 | 3 | 53 | 262 | 65 | 278 | 1.03e-73 | 227 |
| MS.gene53249.t1 | AT1G27930 | 49.528 | 212 | 104 | 2 | 53 | 261 | 62 | 273 | 8.15e-72 | 222 |
| MS.gene53249.t1 | AT5G67210 | 38.430 | 242 | 143 | 4 | 23 | 258 | 49 | 290 | 1.59e-52 | 174 |
| MS.gene53249.t1 | AT2G15440 | 37.054 | 224 | 131 | 5 | 58 | 272 | 81 | 303 | 1.13e-50 | 169 |
| MS.gene53249.t1 | AT3G50220 | 40.376 | 213 | 121 | 4 | 52 | 258 | 85 | 297 | 1.06e-49 | 167 |
| MS.gene53249.t1 | AT4G24910 | 34.536 | 194 | 120 | 4 | 74 | 260 | 104 | 297 | 2.07e-29 | 113 |
Find 68 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCAACTTCTTGGTCTT+TGG | 0.164120 | 3.3:-1152302 | MS.gene53249:CDS |
| AAAATCACCTTGCAACTTCT+TGG | 0.221414 | 3.3:-1152309 | MS.gene53249:CDS |
| AAATGTGGATTAGCACTTAA+AGG | 0.223364 | 3.3:-1152059 | MS.gene53249:CDS |
| AGTGATGAACTAATGAAAAT+TGG | 0.261741 | 3.3:-1152128 | MS.gene53249:CDS |
| AAATCAATTTCATGGACAAT+AGG | 0.306327 | 3.3:+1151755 | None:intergenic |
| ATTGCTAGGAATAGAGAAAA+TGG | 0.307486 | 3.3:-1151924 | MS.gene53249:CDS |
| TTTGTGCATGTTGGTGTTAT+AGG | 0.311759 | 3.3:+1152437 | None:intergenic |
| CCAACGTTGGGAACTTTGAT+TGG | 0.316396 | 3.3:+1152189 | None:intergenic |
| ACCAAGTCATAGGGCACGTT+TGG | 0.318589 | 3.3:-1151784 | MS.gene53249:CDS |
| TCCATGTCTTGTCTTCTTCC+AGG | 0.323320 | 3.3:+1152222 | None:intergenic |
| GGGTACTTCGATGGCGCGCC+GGG | 0.332994 | 3.3:-1151978 | MS.gene53249:CDS |
| TTGTGCATGTTGGTGTTATA+GGG | 0.335274 | 3.3:+1152438 | None:intergenic |
| AACTTCTTGGTCTTTGGATT+AGG | 0.336773 | 3.3:-1152296 | MS.gene53249:CDS |
| ACTTCAATATACCAAGTCAT+AGG | 0.375565 | 3.3:-1151794 | MS.gene53249:CDS |
| ATACAGCTGGTTTGATTGCT+AGG | 0.379409 | 3.3:-1151938 | MS.gene53249:CDS |
| AATCAATTTCATGGACAATA+GGG | 0.382464 | 3.3:+1151756 | None:intergenic |
| TGTTTGTTCATGATGTTGAT+AGG | 0.396580 | 3.3:-1151890 | MS.gene53249:CDS |
| TGGTTGAGAAAATGAGAAAA+TGG | 0.434558 | 3.3:+1152547 | None:intergenic |
| ATGAGTGCTATTTATACAGC+TGG | 0.441985 | 3.3:-1151951 | MS.gene53249:CDS |
| TTGGTGTTTGAAGTTGTTGT+GGG | 0.443623 | 3.3:+1152524 | None:intergenic |
| TCTCTTGAATTGTTTGTTGA+GGG | 0.447760 | 3.3:+1152360 | None:intergenic |
| CTTGTCTTCTTCCAGGAAAA+CGG | 0.456850 | 3.3:+1152229 | None:intergenic |
| TGCATAATGGATTAATGCAT+TGG | 0.464703 | 3.3:+1152397 | None:intergenic |
| TTCTTTGTGAAGGTTATTTG+AGG | 0.465004 | 3.3:-1151839 | MS.gene53249:CDS |
| CCAAGTCATAGGGCACGTTT+GGG | 0.466887 | 3.3:-1151783 | MS.gene53249:CDS |
| TCTTTGTGAAGGTTATTTGA+GGG | 0.475343 | 3.3:-1151838 | MS.gene53249:CDS |
| GGGGTACTTCGATGGCGCGC+CGG | 0.481478 | 3.3:-1151979 | MS.gene53249:CDS |
| CCCAAACGTGCCCTATGACT+TGG | 0.483562 | 3.3:+1151783 | None:intergenic |
| GTTGGTGTTTGAAGTTGTTG+TGG | 0.491866 | 3.3:+1152523 | None:intergenic |
| ATCATGGTGGATGCACCAAC+GGG | 0.492498 | 3.3:-1151999 | MS.gene53249:CDS |
| ATCTCTTGAATTGTTTGTTG+AGG | 0.496296 | 3.3:+1152359 | None:intergenic |
| CATGATATGATTCCAACGTT+GGG | 0.499455 | 3.3:+1152177 | None:intergenic |
| GGGAACAAGAAGGAAGGATT+AGG | 0.499937 | 3.3:-1151818 | MS.gene53249:CDS |
| TGAAATTTATGATGTGGAAT+GGG | 0.503077 | 3.3:-1152027 | MS.gene53249:CDS |
| TCCACATCATAAATTTCACT+TGG | 0.503817 | 3.3:+1152032 | None:intergenic |
| TCCAAGTGAAATTTATGATG+TGG | 0.511674 | 3.3:-1152033 | MS.gene53249:CDS |
| GTGAAATTTATGATGTGGAA+TGG | 0.519138 | 3.3:-1152028 | MS.gene53249:CDS |
| GCACCAACGGGGTACTTCGA+TGG | 0.521410 | 3.3:-1151987 | MS.gene53249:CDS |
| TGTGGAATGGGATGTGATCA+TGG | 0.525871 | 3.3:-1152015 | MS.gene53249:CDS |
| CATCATTGAACTACGGTGGC+CGG | 0.528792 | 3.3:-1152253 | MS.gene53249:CDS |
| ATTAATGCATTGGCTAATGA+TGG | 0.530150 | 3.3:+1152407 | None:intergenic |
| CTTCTTCCAGGAAAACGGTC+CGG | 0.530964 | 3.3:+1152234 | None:intergenic |
| ACATGATATGATTCCAACGT+TGG | 0.536855 | 3.3:+1152176 | None:intergenic |
| ATTTGAGGGAACAAGAAGGA+AGG | 0.541340 | 3.3:-1151824 | MS.gene53249:CDS |
| ACTTCGATGGCGCGCCGGGG+AGG | 0.549464 | 3.3:-1151974 | MS.gene53249:CDS |
| GTGTTTGAAGTTGTTGTGGG+TGG | 0.550586 | 3.3:+1152527 | None:intergenic |
| GAAAATTGGAATGGAACAAG+AGG | 0.553174 | 3.3:-1152114 | MS.gene53249:CDS |
| TCCTGGAAGAAGACAAGACA+TGG | 0.567326 | 3.3:-1152223 | MS.gene53249:CDS |
| GTTGGTGTTATAGGGAGTGA+AGG | 0.571518 | 3.3:+1152446 | None:intergenic |
| TGAACTAATGAAAATTGGAA+TGG | 0.575241 | 3.3:-1152123 | MS.gene53249:CDS |
| AATGCATTGGCTAATGATGG+AGG | 0.575854 | 3.3:+1152410 | None:intergenic |
| CCAATCAAAGTTCCCAACGT+TGG | 0.578373 | 3.3:-1152189 | MS.gene53249:CDS |
| CTCTTGAATTGTTTGTTGAG+GGG | 0.579049 | 3.3:+1152361 | None:intergenic |
| ATGCATTGGCTAATGATGGA+GGG | 0.579142 | 3.3:+1152411 | None:intergenic |
| CTTCAATATACCAAGTCATA+GGG | 0.581013 | 3.3:-1151793 | MS.gene53249:CDS |
| GGTTATTTGAGGGAACAAGA+AGG | 0.586352 | 3.3:-1151828 | MS.gene53249:CDS |
| TGATGTTGATAGGAAAGTTG+AGG | 0.590781 | 3.3:-1151880 | MS.gene53249:CDS |
| GATCATGGTGGATGCACCAA+CGG | 0.605400 | 3.3:-1152000 | MS.gene53249:CDS |
| TTGGTGTTATAGGGAGTGAA+GGG | 0.609114 | 3.3:+1152447 | None:intergenic |
| CCAAAGACCAAGAAGTTGCA+AGG | 0.614426 | 3.3:+1152302 | None:intergenic |
| GCGCCATCGAAGTACCCCGT+TGG | 0.633771 | 3.3:+1151984 | None:intergenic |
| TAAATAGCACTCATCCTCCC+CGG | 0.635229 | 3.3:+1151960 | None:intergenic |
| ATGTGGACATCATTGAACTA+CGG | 0.637354 | 3.3:-1152260 | MS.gene53249:CDS |
| TAGGTCATGATAGTCTCATG+TGG | 0.666366 | 3.3:-1152277 | MS.gene53249:CDS |
| TGGACATCATTGAACTACGG+TGG | 0.678674 | 3.3:-1152257 | MS.gene53249:CDS |
| GGTACTTCGATGGCGCGCCG+GGG | 0.680331 | 3.3:-1151977 | MS.gene53249:CDS |
| GGAATGGGATGTGATCATGG+TGG | 0.725748 | 3.3:-1152012 | MS.gene53249:CDS |
| TCATGGTGGATGCACCAACG+GGG | 0.763267 | 3.3:-1151998 | MS.gene53249:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTTTTTGAAGAACTT+TGG | + | chr3.3:1152005-1152024 | None:intergenic | 20.0% |
| ! | AGTGATGAACTAATGAAAAT+TGG | - | chr3.3:1152199-1152218 | MS.gene53249:CDS | 25.0% |
| ! | TGAAATTTATGATGTGGAAT+GGG | - | chr3.3:1152300-1152319 | MS.gene53249:CDS | 25.0% |
| ! | TGAACTAATGAAAATTGGAA+TGG | - | chr3.3:1152204-1152223 | MS.gene53249:CDS | 25.0% |
| !! | TTTCTTGTGATGAGATTTTT+GGG | + | chr3.3:1151835-1151854 | None:intergenic | 25.0% |
| !!! | AATCCACATTTTGAAAATCT+TGG | + | chr3.3:1152259-1152278 | None:intergenic | 25.0% |
| !!! | ATCCACATTTTGAAAATCTT+GGG | + | chr3.3:1152258-1152277 | None:intergenic | 25.0% |
| !!! | TGATTTTTGTTGTTGCATAA+TGG | + | chr3.3:1151946-1151965 | None:intergenic | 25.0% |
| ACTTCAATATACCAAGTCAT+AGG | - | chr3.3:1152533-1152552 | MS.gene53249:CDS | 30.0% | |
| ATTGCTAGGAATAGAGAAAA+TGG | - | chr3.3:1152403-1152422 | MS.gene53249:CDS | 30.0% | |
| CTTCAATATACCAAGTCATA+GGG | - | chr3.3:1152534-1152553 | MS.gene53249:CDS | 30.0% | |
| GTGAAATTTATGATGTGGAA+TGG | - | chr3.3:1152299-1152318 | MS.gene53249:CDS | 30.0% | |
| TCCAAGTGAAATTTATGATG+TGG | - | chr3.3:1152294-1152313 | MS.gene53249:CDS | 30.0% | |
| TCCACATCATAAATTTCACT+TGG | + | chr3.3:1152298-1152317 | None:intergenic | 30.0% | |
| TCTTTGTGAAGGTTATTTGA+GGG | - | chr3.3:1152489-1152508 | MS.gene53249:CDS | 30.0% | |
| TGGTTGAGAAAATGAGAAAA+TGG | + | chr3.3:1151783-1151802 | None:intergenic | 30.0% | |
| TGTTTGTTCATGATGTTGAT+AGG | - | chr3.3:1152437-1152456 | MS.gene53249:CDS | 30.0% | |
| TTCTTTGTGAAGGTTATTTG+AGG | - | chr3.3:1152488-1152507 | MS.gene53249:CDS | 30.0% | |
| ! | AGTTGAGGATCAATTTTCAA+AGG | - | chr3.3:1152462-1152481 | MS.gene53249:CDS | 30.0% |
| ! | ATCTCTTGAATTGTTTGTTG+AGG | + | chr3.3:1151971-1151990 | None:intergenic | 30.0% |
| ! | GTTTCTTGTGATGAGATTTT+TGG | + | chr3.3:1151836-1151855 | None:intergenic | 30.0% |
| ! | TCTCTTGAATTGTTTGTTGA+GGG | + | chr3.3:1151970-1151989 | None:intergenic | 30.0% |
| !! | AAATGTGGATTAGCACTTAA+AGG | - | chr3.3:1152268-1152287 | MS.gene53249:CDS | 30.0% |
| !! | ATTAATGCATTGGCTAATGA+TGG | + | chr3.3:1151923-1151942 | None:intergenic | 30.0% |
| !! | TGCATAATGGATTAATGCAT+TGG | + | chr3.3:1151933-1151952 | None:intergenic | 30.0% |
| AAAATCACCTTGCAACTTCT+TGG | - | chr3.3:1152018-1152037 | MS.gene53249:CDS | 35.0% | |
| ACATGATATGATTCCAACGT+TGG | + | chr3.3:1152154-1152173 | None:intergenic | 35.0% | |
| ATGTGGACATCATTGAACTA+CGG | - | chr3.3:1152067-1152086 | MS.gene53249:CDS | 35.0% | |
| CATGATATGATTCCAACGTT+GGG | + | chr3.3:1152153-1152172 | None:intergenic | 35.0% | |
| GAAAATTGGAATGGAACAAG+AGG | - | chr3.3:1152213-1152232 | MS.gene53249:CDS | 35.0% | |
| ! | AACTTCTTGGTCTTTGGATT+AGG | - | chr3.3:1152031-1152050 | MS.gene53249:CDS | 35.0% |
| ! | CTCTTGAATTGTTTGTTGAG+GGG | + | chr3.3:1151969-1151988 | None:intergenic | 35.0% |
| ! | GACCCAAGATTTTCAAAATG+TGG | - | chr3.3:1152253-1152272 | MS.gene53249:CDS | 35.0% |
| ! | TCAAAGGCTTTTCTTTGTGA+AGG | - | chr3.3:1152478-1152497 | MS.gene53249:CDS | 35.0% |
| ! | TGATGTTGATAGGAAAGTTG+AGG | - | chr3.3:1152447-1152466 | MS.gene53249:CDS | 35.0% |
| ! | TTGGTGTTTGAAGTTGTTGT+GGG | + | chr3.3:1151806-1151825 | None:intergenic | 35.0% |
| !! | ATGAGTGCTATTTATACAGC+TGG | - | chr3.3:1152376-1152395 | MS.gene53249:CDS | 35.0% |
| !! | TTGTGCATGTTGGTGTTATA+GGG | + | chr3.3:1151892-1151911 | None:intergenic | 35.0% |
| !! | TTTGTGCATGTTGGTGTTAT+AGG | + | chr3.3:1151893-1151912 | None:intergenic | 35.0% |
| !!! | TGAGATTTTTGGGTCATTGT+TGG | + | chr3.3:1151825-1151844 | None:intergenic | 35.0% |
| ATTTGAGGGAACAAGAAGGA+AGG | - | chr3.3:1152503-1152522 | MS.gene53249:CDS | 40.0% | |
| CTTGTCTTCTTCCAGGAAAA+CGG | + | chr3.3:1152101-1152120 | None:intergenic | 40.0% | |
| GGTTATTTGAGGGAACAAGA+AGG | - | chr3.3:1152499-1152518 | MS.gene53249:CDS | 40.0% | |
| TAGGTCATGATAGTCTCATG+TGG | - | chr3.3:1152050-1152069 | MS.gene53249:CDS | 40.0% | |
| ! | GTTGGTGTTTGAAGTTGTTG+TGG | + | chr3.3:1151807-1151826 | None:intergenic | 40.0% |
| !! | AATGCATTGGCTAATGATGG+AGG | + | chr3.3:1151920-1151939 | None:intergenic | 40.0% |
| !! | ATACAGCTGGTTTGATTGCT+AGG | - | chr3.3:1152389-1152408 | MS.gene53249:CDS | 40.0% |
| !! | ATGCATTGGCTAATGATGGA+GGG | + | chr3.3:1151919-1151938 | None:intergenic | 40.0% |
| !! | TTGGTGTTATAGGGAGTGAA+GGG | + | chr3.3:1151883-1151902 | None:intergenic | 40.0% |
| CCAAAGACCAAGAAGTTGCA+AGG | + | chr3.3:1152028-1152047 | None:intergenic | 45.0% | |
| CCAACGTTGGGAACTTTGAT+TGG | + | chr3.3:1152141-1152160 | None:intergenic | 45.0% | |
| CCAATCAAAGTTCCCAACGT+TGG | - | chr3.3:1152138-1152157 | MS.gene53249:CDS | 45.0% | |
| GGGAACAAGAAGGAAGGATT+AGG | - | chr3.3:1152509-1152528 | MS.gene53249:CDS | 45.0% | |
| TAAATAGCACTCATCCTCCC+CGG | + | chr3.3:1152370-1152389 | None:intergenic | 45.0% | |
| TCCATGTCTTGTCTTCTTCC+AGG | + | chr3.3:1152108-1152127 | None:intergenic | 45.0% | |
| TCCTGGAAGAAGACAAGACA+TGG | - | chr3.3:1152104-1152123 | MS.gene53249:CDS | 45.0% | |
| TGGACATCATTGAACTACGG+TGG | - | chr3.3:1152070-1152089 | MS.gene53249:CDS | 45.0% | |
| TGTGGAATGGGATGTGATCA+TGG | - | chr3.3:1152312-1152331 | MS.gene53249:CDS | 45.0% | |
| ! | CCTTGCAACTTCTTGGTCTT+TGG | - | chr3.3:1152025-1152044 | MS.gene53249:CDS | 45.0% |
| ! | GTGTTTGAAGTTGTTGTGGG+TGG | + | chr3.3:1151803-1151822 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATAGGGAGTGA+AGG | + | chr3.3:1151884-1151903 | None:intergenic | 45.0% |
| !!! | GGAGGGTTTTTTGTGCATGT+TGG | + | chr3.3:1151902-1151921 | None:intergenic | 45.0% |
| ACCAAGTCATAGGGCACGTT+TGG | - | chr3.3:1152543-1152562 | MS.gene53249:CDS | 50.0% | |
| CATCATTGAACTACGGTGGC+CGG | - | chr3.3:1152074-1152093 | MS.gene53249:CDS | 50.0% | |
| CCAAGTCATAGGGCACGTTT+GGG | - | chr3.3:1152544-1152563 | MS.gene53249:CDS | 50.0% | |
| CTTCTTCCAGGAAAACGGTC+CGG | + | chr3.3:1152096-1152115 | None:intergenic | 50.0% | |
| GGAATGGGATGTGATCATGG+TGG | - | chr3.3:1152315-1152334 | MS.gene53249:CDS | 50.0% | |
| !! | ATCATGGTGGATGCACCAAC+GGG | - | chr3.3:1152328-1152347 | MS.gene53249:CDS | 50.0% |
| !! | GATCATGGTGGATGCACCAA+CGG | - | chr3.3:1152327-1152346 | MS.gene53249:CDS | 50.0% |
| CCCAAACGTGCCCTATGACT+TGG | + | chr3.3:1152547-1152566 | None:intergenic | 55.0% | |
| !! | TCATGGTGGATGCACCAACG+GGG | - | chr3.3:1152329-1152348 | MS.gene53249:CDS | 55.0% |
| ! | GCACCAACGGGGTACTTCGA+TGG | - | chr3.3:1152340-1152359 | MS.gene53249:CDS | 60.0% |
| ! | GCGCCATCGAAGTACCCCGT+TGG | + | chr3.3:1152346-1152365 | None:intergenic | 65.0% |
| GGGTACTTCGATGGCGCGCC+GGG | - | chr3.3:1152349-1152368 | MS.gene53249:CDS | 70.0% | |
| GGTACTTCGATGGCGCGCCG+GGG | - | chr3.3:1152350-1152369 | MS.gene53249:CDS | 70.0% | |
| ! | CGGTGGCCGGACCGTTTTCC+TGG | - | chr3.3:1152087-1152106 | MS.gene53249:CDS | 70.0% |
| ! | GGGGTACTTCGATGGCGCGC+CGG | - | chr3.3:1152348-1152367 | MS.gene53249:CDS | 70.0% |
| ACTTCGATGGCGCGCCGGGG+AGG | - | chr3.3:1152353-1152372 | MS.gene53249:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1151764 | 1152585 | 1151764 | ID=MS.gene53249 |
| chr3.3 | mRNA | 1151764 | 1152585 | 1151764 | ID=MS.gene53249.t1;Parent=MS.gene53249 |
| chr3.3 | exon | 1151764 | 1152585 | 1151764 | ID=MS.gene53249.t1.exon1;Parent=MS.gene53249.t1 |
| chr3.3 | CDS | 1151764 | 1152585 | 1151764 | ID=cds.MS.gene53249.t1;Parent=MS.gene53249.t1 |
| Gene Sequence |
| Protein sequence |
