AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54143

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54143.t1 MTR_2g068920 88.591 298 27 1 1 298 1 291 0.0 558
MS.gene54143.t1 MTR_2g068880 78.526 312 53 2 1 298 1 312 0.0 511
MS.gene54143.t1 MTR_5g090970 50.167 299 132 7 9 294 6 300 7.64e-93 278
MS.gene54143.t1 MTR_5g090970 49.498 299 133 7 9 294 6 299 1.31e-91 275
MS.gene54143.t1 MTR_5g040420 50.187 267 110 10 18 279 11 259 3.72e-74 233
MS.gene54143.t1 MTR_8g467490 61.905 168 59 3 18 185 11 173 1.85e-71 226
MS.gene54143.t1 MTR_6g011860 46.768 263 108 8 18 261 13 262 2.32e-67 215
MS.gene54143.t1 MTR_4g134460 50.296 169 67 4 17 185 50 201 1.56e-49 170
MS.gene54143.t1 MTR_2g079990 52.326 172 66 4 23 194 18 173 3.51e-49 167
MS.gene54143.t1 MTR_3g088110 53.529 170 65 6 23 192 9 164 8.50e-49 164
MS.gene54143.t1 MTR_8g059170 39.163 263 137 8 23 279 16 261 1.58e-48 164
MS.gene54143.t1 MTR_2g080010 45.143 175 85 4 23 193 17 184 1.79e-47 162
MS.gene54143.t1 MTR_7g085220 47.929 169 75 5 23 186 10 170 1.90e-47 162
MS.gene54143.t1 MTR_2157s0010 40.865 208 108 6 23 221 10 211 1.95e-47 160
MS.gene54143.t1 MTR_8g094580 49.693 163 69 4 23 185 9 158 2.46e-47 160
MS.gene54143.t1 MTR_4g036030 45.614 171 73 4 20 188 7 159 2.46e-47 162
MS.gene54143.t1 MTR_4g089135 45.213 188 84 4 23 196 17 199 5.16e-47 161
MS.gene54143.t1 MTR_2g079990 47.619 189 77 5 23 194 18 201 6.27e-47 162
MS.gene54143.t1 MTR_5g012080 46.512 172 72 5 20 188 7 161 1.15e-46 160
MS.gene54143.t1 MTR_4g081870 49.091 165 68 4 23 185 11 161 1.67e-46 157
MS.gene54143.t1 MTR_5g041940 48.466 163 72 3 23 185 5 155 2.18e-46 157
MS.gene54143.t1 MTR_4g101680 44.199 181 81 5 20 198 7 169 1.20e-45 158
MS.gene54143.t1 MTR_7g100990 44.643 168 83 3 23 190 13 170 2.68e-45 156
MS.gene54143.t1 MTR_2g064090 46.243 173 74 5 23 194 8 162 3.58e-45 156
MS.gene54143.t1 MTR_2g093810 45.238 168 82 3 23 190 16 173 5.16e-45 155
MS.gene54143.t1 MTR_3g435150 40.284 211 106 5 17 223 12 206 5.31e-45 155
MS.gene54143.t1 MTR_5g021710 39.806 206 104 4 20 223 8 195 1.12e-44 155
MS.gene54143.t1 MTR_6g477900 45.455 165 74 3 23 186 8 157 2.25e-44 151
MS.gene54143.t1 MTR_4g108760 42.188 192 92 5 19 206 16 192 8.19e-44 153
MS.gene54143.t1 MTR_3g096920 50.000 160 66 6 23 182 9 154 9.71e-44 151
MS.gene54143.t1 MTR_7g085260 46.067 178 83 5 19 196 16 180 1.29e-43 153
MS.gene54143.t1 MTR_3g064580 48.485 165 70 4 23 186 8 158 1.70e-43 157
MS.gene54143.t1 MTR_6g032770 43.158 190 95 4 17 205 13 190 1.92e-43 152
MS.gene54143.t1 MTR_5g076850 46.988 166 72 4 23 187 8 158 2.67e-43 157
MS.gene54143.t1 MTR_2g062730 42.051 195 91 7 20 211 10 185 3.57e-43 151
MS.gene54143.t1 MTR_6g012670 45.882 170 76 5 23 191 22 176 5.54e-43 150
MS.gene54143.t1 MTR_7g005280 46.286 175 73 6 13 185 6 161 1.17e-42 147
MS.gene54143.t1 MTR_8g024480 44.643 168 84 4 20 185 15 175 1.58e-42 151
MS.gene54143.t1 MTR_3g096920 55.814 129 51 3 23 151 9 131 3.52e-42 148
MS.gene54143.t1 MTR_8g076110 43.860 171 76 4 20 188 6 158 5.39e-42 147
MS.gene54143.t1 MTR_8g099750 46.386 166 78 4 23 188 16 170 9.93e-42 144
MS.gene54143.t1 MTR_6g084430 41.143 175 84 4 17 191 2 157 6.76e-41 144
MS.gene54143.t1 MTR_4g098630 39.048 210 105 6 23 231 8 195 7.49e-41 144
MS.gene54143.t1 MTR_3g109340 42.781 187 91 5 5 191 7 177 9.16e-41 145
MS.gene54143.t1 MTR_5g014300 42.857 168 78 3 23 186 8 161 1.10e-40 144
MS.gene54143.t1 MTR_3g109340 41.711 187 92 4 5 191 7 176 1.95e-40 144
MS.gene54143.t1 MTR_1g096430 43.030 165 75 3 23 185 9 156 6.78e-40 142
MS.gene54143.t1 MTR_2g078700 53.488 129 57 2 23 151 25 150 1.08e-39 143
MS.gene54143.t1 MTR_4g075980 44.848 165 83 3 1 165 1 157 1.37e-39 140
MS.gene54143.t1 MTR_3g070030 38.000 200 109 5 16 213 13 199 1.85e-39 141
MS.gene54143.t1 MTR_7g011130 38.710 217 115 6 1 209 1 207 3.13e-39 141
MS.gene54143.t1 MTR_1g090723 44.444 171 78 5 23 191 10 165 1.09e-38 144
MS.gene54143.t1 MTR_4g035590 37.879 198 94 5 20 215 8 178 1.11e-38 139
MS.gene54143.t1 MTR_1g008740 39.674 184 95 4 9 191 1 169 1.35e-38 139
MS.gene54143.t1 MTR_1g069805 34.821 224 121 5 23 246 12 210 1.59e-38 137
MS.gene54143.t1 MTR_1g008740 39.459 185 96 4 8 191 14 183 1.66e-38 139
MS.gene54143.t1 MTR_1g090723 43.275 171 79 4 23 191 10 164 1.97e-38 143
MS.gene54143.t1 MTR_1g090723 43.275 171 79 4 23 191 10 164 2.26e-38 142
MS.gene54143.t1 MTR_2g064470 43.678 174 81 5 23 196 13 169 2.27e-38 137
MS.gene54143.t1 MTR_7g011120 38.350 206 114 5 9 213 1 194 5.90e-38 136
MS.gene54143.t1 MTR_3g098810 37.441 211 111 5 23 233 16 205 7.65e-38 134
MS.gene54143.t1 MTR_2g086880 42.581 155 78 3 22 169 19 169 2.69e-37 139
MS.gene54143.t1 MTR_1g097300 48.855 131 62 2 22 151 20 146 2.80e-37 139
MS.gene54143.t1 MTR_2g086880 42.581 155 78 3 22 169 19 169 3.05e-37 139
MS.gene54143.t1 MTR_8g063550 41.212 165 81 3 22 185 7 156 1.03e-36 134
MS.gene54143.t1 MTR_3g116070 49.242 132 63 3 23 153 25 153 1.17e-36 134
MS.gene54143.t1 MTR_0036s0150 43.860 171 78 5 23 191 7 161 1.60e-36 137
MS.gene54143.t1 MTR_8g063550 41.212 165 81 3 22 185 7 156 2.72e-36 135
MS.gene54143.t1 MTR_3g096140 40.606 165 82 3 22 185 8 157 2.83e-36 131
MS.gene54143.t1 MTR_8g063550 41.212 165 81 3 22 185 7 156 3.70e-36 134
MS.gene54143.t1 MTR_5g069030 50.000 132 60 3 20 150 25 151 5.30e-36 136
MS.gene54143.t1 MTR_1g090720 43.636 165 83 3 23 186 44 199 1.15e-35 134
MS.gene54143.t1 MTR_3g096140 40.606 165 82 3 22 185 8 157 1.68e-35 131
MS.gene54143.t1 MTR_8g093580 40.000 165 83 3 22 185 7 156 2.08e-35 133
MS.gene54143.t1 MTR_3g093050 40.449 178 89 5 10 186 12 173 2.85e-35 134
MS.gene54143.t1 MTR_3g093050 40.449 178 89 5 10 186 12 173 4.04e-35 134
MS.gene54143.t1 MTR_7g097090 40.994 161 77 3 23 183 12 154 8.34e-34 125
MS.gene54143.t1 MTR_3g098810 46.565 131 67 1 23 153 16 143 1.12e-33 121
MS.gene54143.t1 MTR_3g093040 40.476 168 83 6 20 186 108 259 1.58e-33 125
MS.gene54143.t1 MTR_8g023840 40.120 167 78 6 19 183 10 156 2.61e-32 123
MS.gene54143.t1 MTR_3g070040 38.690 168 87 4 25 191 12 164 1.08e-31 120
MS.gene54143.t1 MTR_4g052620 37.273 220 112 8 18 223 2 209 1.97e-31 118
MS.gene54143.t1 MTR_8g023860 38.690 168 81 6 18 183 10 157 8.17e-30 117
MS.gene54143.t1 MTR_7g105170 34.270 178 102 6 18 190 2 169 1.16e-27 108
MS.gene54143.t1 MTR_8g023900 36.313 179 94 6 9 185 1 161 4.95e-27 110
MS.gene54143.t1 MTR_8g023900 38.415 164 80 5 24 185 196 340 1.14e-26 108
MS.gene54143.t1 MTR_2g086690 37.576 165 87 5 23 182 6 159 5.92e-27 106
MS.gene54143.t1 MTR_3g096140 36.667 150 79 3 37 185 2 136 1.18e-25 104
MS.gene54143.t1 MTR_8g023930 36.471 170 86 6 18 185 22 171 3.92e-25 104
MS.gene54143.t1 MTR_4g094302 32.934 167 90 5 23 186 13 160 6.03e-24 96.7
MS.gene54143.t1 MTR_8g094580 44.643 112 50 3 74 185 5 104 7.45e-24 97.4
MS.gene54143.t1 MTR_4g094302 37.879 132 65 4 23 151 13 130 2.75e-23 94.0
MS.gene54143.t1 MTR_7g070140 50.000 80 38 1 75 154 17 94 2.08e-19 82.8
MS.gene54143.t1 MTR_8g023880 32.212 208 94 10 24 215 10 186 1.34e-18 84.0
MS.gene54143.t1 MTR_7g083330 35.570 149 78 7 9 149 3 141 1.76e-18 82.0
MS.gene54143.t1 MTR_7g083370 33.333 135 80 6 17 149 7 133 6.19e-17 76.3
MS.gene54143.t1 MTR_1g087190 64.583 48 16 1 23 69 7 54 1.82e-16 72.4
MS.gene54143.t1 MTR_7g083360 34.286 140 84 5 19 156 7 140 2.44e-16 75.1
MS.gene54143.t1 MTR_8g093790 30.675 163 77 7 23 185 12 138 3.31e-16 75.5
MS.gene54143.t1 MTR_3g096400 30.303 165 95 6 23 182 9 158 3.70e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54143.t1 AT2G43000 70.857 175 36 4 16 190 13 172 1.75e-83 253
MS.gene54143.t1 AT3G12910 57.798 218 76 6 16 230 16 220 2.09e-79 243
MS.gene54143.t1 AT5G39820 54.245 212 77 6 18 213 17 224 1.74e-71 224
MS.gene54143.t1 AT1G26870 61.310 168 60 3 18 185 13 175 2.70e-67 216
MS.gene54143.t1 AT3G04070 48.588 177 77 4 23 186 12 187 5.44e-53 177
MS.gene54143.t1 AT3G04070 50.909 165 75 4 23 186 12 171 7.05e-53 176
MS.gene54143.t1 AT2G02450 48.691 191 77 7 22 211 52 222 1.61e-52 176
MS.gene54143.t1 AT2G02450 48.691 191 77 7 22 211 52 222 2.80e-52 177
MS.gene54143.t1 AT1G61110 48.333 180 78 4 23 196 18 188 3.33e-50 169
MS.gene54143.t1 AT1G69490 51.534 163 67 4 23 185 11 161 3.33e-49 164
MS.gene54143.t1 AT1G01720 50.867 173 71 5 23 194 9 168 1.19e-48 164
MS.gene54143.t1 AT4G27410 47.283 184 80 5 23 205 16 183 8.00e-48 162
MS.gene54143.t1 AT1G52890 48.404 188 76 5 23 208 16 184 1.00e-47 162
MS.gene54143.t1 AT3G15500 50.581 172 65 4 23 192 16 169 2.56e-47 161
MS.gene54143.t1 AT3G15510 42.254 213 93 6 25 214 21 226 3.02e-47 162
MS.gene54143.t1 AT5G08790 40.000 220 108 7 24 238 10 210 1.24e-46 158
MS.gene54143.t1 AT5G63790 47.368 171 78 5 24 194 63 221 1.63e-46 159
MS.gene54143.t1 AT5G63790 47.368 171 78 5 24 194 53 211 1.64e-46 159
MS.gene54143.t1 AT1G12260 44.886 176 77 4 20 193 7 164 2.59e-46 159
MS.gene54143.t1 AT1G71930 36.823 277 132 9 23 284 11 259 4.27e-46 158
MS.gene54143.t1 AT1G71930 36.823 277 132 9 23 284 11 259 4.27e-46 158
MS.gene54143.t1 AT1G12260 44.886 176 77 4 20 193 7 164 4.29e-46 160
MS.gene54143.t1 AT2G43000 72.897 107 15 3 84 190 2 94 1.24e-45 153
MS.gene54143.t1 AT5G61430 46.591 176 78 5 19 194 15 174 1.55e-45 157
MS.gene54143.t1 AT5G62380 44.643 168 74 3 23 188 9 159 5.01e-45 156
MS.gene54143.t1 AT5G62380 44.643 168 74 3 23 188 9 159 5.01e-45 156
MS.gene54143.t1 AT1G77450 49.123 171 72 7 23 192 12 168 5.81e-45 153
MS.gene54143.t1 AT4G27410 43.500 200 81 6 23 205 16 200 6.57e-45 155
MS.gene54143.t1 AT3G04060 45.503 189 82 6 19 201 19 192 1.11e-44 155
MS.gene54143.t1 AT2G17040 32.609 276 162 4 19 288 4 261 1.39e-44 153
MS.gene54143.t1 AT5G13180 46.023 176 76 4 9 183 1 158 1.48e-44 152
MS.gene54143.t1 AT5G07680 45.506 178 80 5 16 191 11 173 1.99e-44 154
MS.gene54143.t1 AT3G17730 45.455 165 74 3 23 186 8 157 2.80e-44 151
MS.gene54143.t1 AT5G07680 45.977 174 77 5 19 191 2 159 2.86e-44 153
MS.gene54143.t1 AT5G39610 44.751 181 85 4 12 191 10 176 3.13e-44 152
MS.gene54143.t1 AT3G03200 41.262 206 105 5 23 226 8 199 3.16e-44 157
MS.gene54143.t1 AT1G65910 46.784 171 73 4 23 191 8 162 7.26e-44 158
MS.gene54143.t1 AT1G62700 45.029 171 74 4 20 188 7 159 7.95e-44 154
MS.gene54143.t1 AT1G62700 45.029 171 74 4 20 188 7 159 7.95e-44 154
MS.gene54143.t1 AT4G36160 44.886 176 77 4 12 185 2 159 9.44e-44 153
MS.gene54143.t1 AT4G36160 44.886 176 77 4 12 185 2 159 9.44e-44 153
MS.gene54143.t1 AT4G36160 44.886 176 77 4 12 185 6 163 1.12e-43 153
MS.gene54143.t1 AT5G18270 47.337 169 73 5 19 186 20 173 2.36e-43 151
MS.gene54143.t1 AT2G18060 44.444 171 75 4 20 188 9 161 2.96e-43 152
MS.gene54143.t1 AT2G18060 44.444 171 75 4 20 188 9 161 2.96e-43 152
MS.gene54143.t1 AT5G17260 41.500 200 99 5 23 221 8 190 4.51e-43 154
MS.gene54143.t1 AT5G18270 46.746 169 74 5 19 186 20 173 1.09e-42 149
MS.gene54143.t1 AT2G46770 43.275 171 81 4 23 185 18 180 1.28e-42 150
MS.gene54143.t1 AT2G33480 46.988 166 69 4 23 188 17 163 1.61e-42 147
MS.gene54143.t1 AT3G61910 42.857 168 88 3 23 186 13 176 1.95e-42 149
MS.gene54143.t1 AT1G54330 44.886 176 74 4 23 197 8 161 2.04e-42 148
MS.gene54143.t1 AT1G52880 51.220 164 76 3 25 188 21 180 2.47e-42 148
MS.gene54143.t1 AT1G32510 41.361 191 98 4 23 209 8 188 2.87e-42 147
MS.gene54143.t1 AT2G33480 46.988 166 67 4 23 188 17 161 3.19e-42 146
MS.gene54143.t1 AT3G29035 49.045 157 72 4 14 168 16 166 4.80e-42 147
MS.gene54143.t1 AT3G12977 39.815 216 96 7 23 238 20 201 5.40e-42 146
MS.gene54143.t1 AT3G18400 44.000 175 80 5 17 191 2 158 8.07e-42 147
MS.gene54143.t1 AT1G76420 43.429 175 81 5 23 196 24 181 1.15e-41 147
MS.gene54143.t1 AT5G66300 42.614 176 80 5 23 193 14 173 3.76e-41 144
MS.gene54143.t1 AT2G24430 42.697 178 86 5 16 193 12 173 5.06e-41 145
MS.gene54143.t1 AT2G24430 42.697 178 86 5 16 193 12 173 5.06e-41 145
MS.gene54143.t1 AT5G46590 50.000 130 61 2 23 151 8 134 5.70e-41 144
MS.gene54143.t1 AT5G46590 50.000 130 61 2 23 151 8 134 1.02e-40 143
MS.gene54143.t1 AT4G17980 44.848 165 79 4 23 186 8 161 1.13e-40 142
MS.gene54143.t1 AT4G17980 44.848 165 79 4 23 186 8 161 1.66e-40 142
MS.gene54143.t1 AT3G15170 43.503 177 87 4 16 191 15 179 1.76e-40 143
MS.gene54143.t1 AT1G79580 42.424 165 76 4 23 185 19 166 3.13e-40 144
MS.gene54143.t1 AT1G79580 42.424 165 76 4 23 185 19 166 3.13e-40 144
MS.gene54143.t1 AT1G79580 42.424 165 76 4 23 185 19 166 3.13e-40 144
MS.gene54143.t1 AT1G79580 42.424 165 76 4 23 185 19 166 3.13e-40 144
MS.gene54143.t1 AT1G79580 42.424 165 76 4 23 185 19 166 3.13e-40 144
MS.gene54143.t1 AT3G10500 44.253 174 81 4 23 195 11 169 3.84e-40 147
MS.gene54143.t1 AT1G32770 40.556 180 93 5 23 196 18 189 4.43e-39 140
MS.gene54143.t1 AT1G56010 43.976 166 79 4 23 187 21 173 7.26e-39 139
MS.gene54143.t1 AT3G10480 43.030 165 78 4 23 186 29 178 7.50e-39 142
MS.gene54143.t1 AT4G10350 42.105 171 80 5 20 187 9 163 7.74e-39 139
MS.gene54143.t1 AT5G04410 46.667 165 72 5 23 186 11 160 8.72e-39 144
MS.gene54143.t1 AT3G10480 43.030 165 79 4 23 186 29 179 1.04e-38 141
MS.gene54143.t1 AT2G27300 40.940 149 84 1 22 170 15 159 4.15e-38 137
MS.gene54143.t1 AT1G33280 42.424 165 75 4 23 185 10 156 1.43e-37 135
MS.gene54143.t1 AT3G10490 41.212 165 82 5 23 186 29 179 4.66e-37 132
MS.gene54143.t1 AT1G34180 49.231 130 61 2 23 151 18 143 4.74e-37 137
MS.gene54143.t1 AT4G35580 50.746 134 60 3 18 150 7 135 8.56e-37 137
MS.gene54143.t1 AT4G35580 49.645 141 64 4 18 157 7 141 9.54e-37 137
MS.gene54143.t1 AT4G35580 49.645 141 64 4 18 157 7 141 9.83e-37 137
MS.gene54143.t1 AT1G34190 49.231 130 61 2 23 151 18 143 1.03e-36 137
MS.gene54143.t1 AT3G44290 42.969 128 69 1 22 149 15 138 1.13e-36 131
MS.gene54143.t1 AT1G34180 49.231 130 61 2 23 151 18 143 1.47e-36 137
MS.gene54143.t1 AT5G53950 50.365 137 64 3 15 151 12 144 2.05e-36 134
MS.gene54143.t1 AT5G22290 40.940 149 79 2 1 149 6 145 2.93e-36 133
MS.gene54143.t1 AT3G10490 41.212 165 82 5 23 186 29 179 3.25e-36 135
MS.gene54143.t1 AT5G09330 39.394 165 84 3 23 186 8 157 5.49e-36 135
MS.gene54143.t1 AT5G09330 39.394 165 84 3 23 186 8 157 5.49e-36 135
MS.gene54143.t1 AT5G09330 39.394 165 84 3 23 186 8 157 5.49e-36 135
MS.gene54143.t1 AT5G09330 39.394 165 84 3 23 186 8 157 5.49e-36 135
MS.gene54143.t1 AT5G09330 39.394 165 84 3 23 186 8 157 5.49e-36 135
MS.gene54143.t1 AT3G44290 42.969 128 69 1 22 149 15 138 8.99e-36 131
MS.gene54143.t1 AT1G33060 48.485 132 62 3 20 150 24 150 9.33e-36 136
MS.gene54143.t1 AT1G33060 48.485 132 62 3 20 150 24 150 9.80e-36 135
MS.gene54143.t1 AT1G34180 45.070 142 61 2 23 151 18 155 1.67e-34 130
MS.gene54143.t1 AT5G64060 32.710 214 128 3 23 235 8 206 3.25e-34 127
MS.gene54143.t1 AT1G34180 45.070 142 61 2 23 151 18 155 5.13e-34 130
MS.gene54143.t1 AT3G49530 45.390 141 72 4 11 150 4 140 1.76e-33 127
MS.gene54143.t1 AT5G24590 48.855 131 62 3 22 150 13 140 2.30e-33 127
MS.gene54143.t1 AT3G10480 35.859 198 79 4 23 186 29 212 2.79e-33 128
MS.gene54143.t1 AT3G49530 45.390 141 72 4 11 150 4 140 5.00e-33 126
MS.gene54143.t1 AT5G04395 39.333 150 77 3 14 151 22 169 8.02e-31 114
MS.gene54143.t1 AT4G28530 40.556 180 71 6 23 185 12 172 3.49e-30 117
MS.gene54143.t1 AT5G61430 46.281 121 51 3 74 194 5 111 1.00e-27 108
MS.gene54143.t1 AT5G64530 34.091 176 90 6 23 191 5 161 1.80e-27 105
MS.gene54143.t1 AT3G12977 39.877 163 65 6 76 238 19 148 3.71e-27 106
MS.gene54143.t1 AT5G22380 30.568 229 133 7 18 234 3 217 4.65e-27 106
MS.gene54143.t1 AT1G32870 46.154 130 63 3 23 151 12 135 1.84e-26 108
MS.gene54143.t1 AT1G32870 46.154 130 63 3 23 151 12 135 2.19e-26 108
MS.gene54143.t1 AT1G32870 46.154 130 63 3 23 151 48 171 2.67e-26 108
MS.gene54143.t1 AT5G64530 40.000 130 63 4 23 152 5 119 9.74e-26 100
MS.gene54143.t1 AT3G44350 40.141 142 74 4 24 159 8 144 1.89e-25 99.8
MS.gene54143.t1 AT3G44350 36.416 173 89 6 24 190 8 165 2.21e-25 101
MS.gene54143.t1 AT4G01550 41.667 132 74 3 22 151 5 135 6.46e-24 101
MS.gene54143.t1 AT1G56010 42.857 112 52 2 76 187 7 106 5.67e-23 95.5
MS.gene54143.t1 AT4G01540 42.105 133 73 4 22 151 5 136 7.13e-23 97.8
MS.gene54143.t1 AT4G01540 42.105 133 73 4 22 151 5 136 9.44e-23 97.8
MS.gene54143.t1 AT4G01540 42.105 133 73 4 22 151 5 136 1.14e-22 97.4
MS.gene54143.t1 AT4G01540 42.105 133 73 4 22 151 5 136 1.39e-22 97.4
MS.gene54143.t1 AT4G01520 40.458 131 74 4 24 151 7 136 1.48e-22 95.5
MS.gene54143.t1 AT2G33480 43.478 115 50 3 74 188 7 106 8.20e-22 91.7
MS.gene54143.t1 AT4G10350 41.228 114 51 3 75 187 18 116 3.98e-20 88.6
MS.gene54143.t1 AT1G02230 40.602 133 72 5 24 153 6 134 7.21e-20 89.0
MS.gene54143.t1 AT1G02250 40.310 129 70 5 24 149 6 130 2.57e-19 87.4
MS.gene54143.t1 AT3G04420 38.760 129 72 4 24 149 6 130 1.16e-18 84.7
MS.gene54143.t1 AT3G04420 38.760 129 72 4 24 149 6 130 3.23e-18 84.0
MS.gene54143.t1 AT4G28530 43.925 107 41 3 23 112 12 116 8.75e-18 82.4
MS.gene54143.t1 AT5G50820 35.556 135 72 5 23 154 19 141 1.41e-16 76.6
MS.gene54143.t1 AT5G14000 29.677 155 99 4 14 165 7 154 2.99e-16 75.1
MS.gene54143.t1 AT5G14000 29.870 154 98 4 14 164 7 153 2.54e-15 73.6
MS.gene54143.t1 AT2G18060 39.326 89 37 2 100 188 2 73 8.56e-15 73.6
MS.gene54143.t1 AT1G02220 37.209 129 71 5 24 149 6 127 1.65e-14 73.6
MS.gene54143.t1 AT1G01010 35.220 159 87 8 24 169 6 161 4.16e-14 72.8
MS.gene54143.t1 AT3G56530 30.882 136 88 2 23 156 54 185 5.29e-13 68.6

Find 46 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGTTATCATTTGATAAT+TGG 0.118959 2.2:-23328177 MS.gene54143:CDS
TAACACCATCACCAAATATT+TGG 0.162351 2.2:-23328219 MS.gene54143:CDS
TCTATGGCATGCAGGAAATT+TGG 0.174862 2.2:-23328492 MS.gene54143:intron
CAACAAACATATATAAATTT+TGG 0.178717 2.2:-23328334 MS.gene54143:CDS
TCCTGCTTAATCCAAATATT+TGG 0.198103 2.2:+23328208 None:intergenic
GAGTAACTGGCTCTGGATTT+TGG 0.205807 2.2:-23329652 MS.gene54143:CDS
CCAGAGCCAGTTACTCTATT+TGG 0.214492 2.2:+23329659 None:intergenic
CTCCATATTGTTGTTCATTC+TGG 0.222827 2.2:+23328369 None:intergenic
GATGATGATGTTCCACTTCC+TGG 0.336439 2.2:-23331216 MS.gene54143:CDS
ATGCATCATCCAATCAGTTT+TGG 0.355638 2.2:+23329520 None:intergenic
TTGATAAGATCAATAGCAAT+AGG 0.382635 2.2:+23331126 None:intergenic
GTTGTTATCATTTGATAATT+GGG 0.385673 2.2:-23328176 MS.gene54143:CDS
GTTAGACCAAATAGAGTAAC+TGG 0.397406 2.2:-23329665 MS.gene54143:CDS
GCCAAAGAGGAAGAAAATAT+AGG 0.410785 2.2:-23329694 MS.gene54143:CDS
CACCAGAATGAACAACAATA+TGG 0.411184 2.2:-23328371 MS.gene54143:CDS
CATGAATGTGATGATGTTCA+TGG 0.422886 2.2:+23328305 None:intergenic
CAATATACCTGGAGCAGAAA+AGG 0.430294 2.2:-23329732 MS.gene54143:CDS
CCAAATAGAGTAACTGGCTC+TGG 0.433254 2.2:-23329659 MS.gene54143:CDS
ATATCTACAAATATGATCCT+TGG 0.441210 2.2:-23331095 MS.gene54143:CDS
ACCAAATATTTGGATTAAGC+AGG 0.451212 2.2:-23328209 MS.gene54143:CDS
AATTATACTATTTACAAACT+AGG 0.458098 2.2:+23328115 None:intergenic
AGAGAAGATGGGTGTGAACA+AGG 0.465028 2.2:-23331271 None:intergenic
TTTGATAATTGGGATGAGCT+TGG 0.467447 2.2:-23328166 MS.gene54143:CDS
GACAAAGCAATATACTCAAA+TGG 0.469362 2.2:-23329614 MS.gene54143:CDS
TATCTACAAATATGATCCTT+GGG 0.485955 2.2:-23331094 MS.gene54143:CDS
AGTAACAAGTTCTTCATCAG+TGG 0.489640 2.2:+23331179 None:intergenic
GAAAAGGCACCAAAACTGAT+TGG 0.493016 2.2:-23329529 MS.gene54143:CDS
GTTTACTATCGTGGTAGTGC+CGG 0.501396 2.2:-23329551 MS.gene54143:CDS
TATCGTGGTAGTGCCGGAAA+AGG 0.518878 2.2:-23329545 MS.gene54143:CDS
ATATACTCAAATGGAGGAGA+AGG 0.533042 2.2:-23329605 MS.gene54143:CDS
GTGGGATGGAATCGAAATCC+AGG 0.534091 2.2:+23331198 None:intergenic
TGGAATCGAAATCCAGGAAG+TGG 0.540063 2.2:+23331204 None:intergenic
AAAACACTTGTTTACTATCG+TGG 0.541680 2.2:-23329560 MS.gene54143:CDS
CAAGTTCTTCATCAGTGGGA+TGG 0.573307 2.2:+23331184 None:intergenic
GTAACAAGTTCTTCATCAGT+GGG 0.577779 2.2:+23331180 None:intergenic
GGAGAAGGAAATGATTGTGT+TGG 0.583944 2.2:-23329590 MS.gene54143:CDS
AACATACTTGGAAGATCCCA+AGG 0.589388 2.2:+23331078 None:intergenic
ATCAGCATCATTCTTAGCAT+AGG 0.603706 2.2:+23329454 None:intergenic
TATACAGAAGTCAATATACC+TGG 0.606398 2.2:-23329743 MS.gene54143:intron
TTAATCCAAATATTTGGTGA+TGG 0.619082 2.2:+23328214 None:intergenic
ATGAGCTTGGATCAGTTGTG+AGG 0.626748 2.2:-23328153 MS.gene54143:CDS
AAAGCAATATACTCAAATGG+AGG 0.648134 2.2:-23329611 MS.gene54143:CDS
ATACCTGGAGCAGAAAAGGA+AGG 0.652548 2.2:-23329728 MS.gene54143:CDS
TCAAAAGAAATGTATCACAA+AGG 0.663587 2.2:-23328453 MS.gene54143:CDS
TGAACATCATCACATTCATG+AGG 0.690719 2.2:-23328302 MS.gene54143:CDS
TGTGAACAAGGATTTCAACA+TGG 0.701933 2.2:-23331259 MS.gene54143:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTGTAAAAATTATGT+AGG + chr2.2:23330081-23330100 None:intergenic 10.0%
!! ATAAAATAATTAAGGATTAA+AGG + chr2.2:23330438-23330457 None:intergenic 10.0%
!! TAAAATAATTAAGGATTAAA+GGG + chr2.2:23330437-23330456 None:intergenic 10.0%
!!! ATTATTTTATTATTTTCTCT+TGG - chr2.2:23330448-23330467 MS.gene54143:intron 10.0%
!! AAAAAAAAGAAAGAAAAGAA+TGG + chr2.2:23328961-23328980 None:intergenic 15.0%
!! AAAAAAAGAAAGAAAAGAAT+GGG + chr2.2:23328960-23328979 None:intergenic 15.0%
!! ATAAGCAAGAATATTATTAA+TGG - chr2.2:23330773-23330792 MS.gene54143:intron 15.0%
!! ATAATGAAAAGGAAAAATAA+AGG + chr2.2:23329590-23329609 None:intergenic 15.0%
!! CAATACTTAGATTTATAAAA+AGG + chr2.2:23328682-23328701 None:intergenic 15.0%
!! TAAGCAAGAATATTATTAAT+GGG - chr2.2:23330774-23330793 MS.gene54143:intron 15.0%
!!! ATTTTTTTTTTTTATACTGC+TGG - chr2.2:23328625-23328644 MS.gene54143:intron 15.0%
!!! CAACAAACATATATAAATTT+TGG - chr2.2:23331056-23331075 MS.gene54143:intron 15.0%
!!! TTATTTTTCCTTTTCATTAT+AGG - chr2.2:23329590-23329609 MS.gene54143:CDS 15.0%
!!! TTTTTACAAATTTTGTACAT+AGG - chr2.2:23330087-23330106 MS.gene54143:intron 15.0%
!! AAAAGAATAATCGCTAAATT+TGG + chr2.2:23330637-23330656 None:intergenic 20.0%
!! AAATTTATAGATAGAATGAG+AGG - chr2.2:23330310-23330329 MS.gene54143:intron 20.0%
!! AAGCAAGAATATTATTAATG+GGG - chr2.2:23330775-23330794 MS.gene54143:intron 20.0%
!! CTCATTCTATCTATAAATTT+GGG + chr2.2:23330310-23330329 None:intergenic 20.0%
!! TACATACAATAAAAGTTTGA+TGG + chr2.2:23329996-23330015 None:intergenic 20.0%
!! TATAAAAACCAGCTAATAAA+AGG + chr2.2:23330273-23330292 None:intergenic 20.0%
!! TATAGTTACCTATAATGAAA+AGG + chr2.2:23329601-23329620 None:intergenic 20.0%
!! TCTCATTCTATCTATAAATT+TGG + chr2.2:23330311-23330330 None:intergenic 20.0%
!! TGATCATGATTATCAATAAT+TGG - chr2.2:23328653-23328672 MS.gene54143:intron 20.0%
!!! AATATTTTCACATAGAATCA+GGG + chr2.2:23329492-23329511 None:intergenic 20.0%
!!! AATATTTTTCAGTGTAATTG+AGG + chr2.2:23329518-23329537 None:intergenic 20.0%
!!! AGTTGTTATCATTTGATAAT+TGG - chr2.2:23331213-23331232 MS.gene54143:CDS 20.0%
!!! ATCTGAGATTAAATTATTAG+TGG + chr2.2:23329465-23329484 None:intergenic 20.0%
!!! CATAATGTGAAATCATATTT+TGG - chr2.2:23329055-23329074 MS.gene54143:intron 20.0%
!!! GGGCTATTTTTTTTTTTTAA+AGG + chr2.2:23329443-23329462 None:intergenic 20.0%
!!! GTATGTATATATGTTGATTT+TGG - chr2.2:23330009-23330028 MS.gene54143:intron 20.0%
!!! GTTGTTATCATTTGATAATT+GGG - chr2.2:23331214-23331233 MS.gene54143:CDS 20.0%
!!! TAATATTTTCACATAGAATC+AGG + chr2.2:23329493-23329512 None:intergenic 20.0%
!!! TCTGAGATTAAATTATTAGT+GGG + chr2.2:23329464-23329483 None:intergenic 20.0%
! AAACATAATATTCTATGCAG+GGG - chr2.2:23328889-23328908 MS.gene54143:intron 25.0%
! ACAAACATAATATTCTATGC+AGG - chr2.2:23328887-23328906 MS.gene54143:intron 25.0%
! ACACAAACTATAAGGAAAAA+TGG - chr2.2:23328474-23328493 MS.gene54143:CDS 25.0%
! ATACAATAAAAGTTTGATGG+TGG + chr2.2:23329993-23330012 None:intergenic 25.0%
! ATATATAGAGAGAATTACGT+GGG + chr2.2:23329545-23329564 None:intergenic 25.0%
! ATATCTACAAATATGATCCT+TGG - chr2.2:23328295-23328314 MS.gene54143:CDS 25.0%
! ATTATTAATGGGGATTACAA+GGG - chr2.2:23330785-23330804 MS.gene54143:intron 25.0%
! CAAACATAATATTCTATGCA+GGG - chr2.2:23328888-23328907 MS.gene54143:intron 25.0%
! CTGAGATTAAATTATTAGTG+GGG + chr2.2:23329463-23329482 None:intergenic 25.0%
! CTTGAATGTAGTTATAACTA+AGG + chr2.2:23328565-23328584 None:intergenic 25.0%
! TATATATAGAGAGAATTACG+TGG + chr2.2:23329546-23329565 None:intergenic 25.0%
! TATCTACAAATATGATCCTT+GGG - chr2.2:23328296-23328315 MS.gene54143:CDS 25.0%
! TATTATTAATGGGGATTACA+AGG - chr2.2:23330784-23330803 MS.gene54143:intron 25.0%
! TCAAAAGAAATGTATCACAA+AGG - chr2.2:23330937-23330956 MS.gene54143:intron 25.0%
! TCTAAATGACACAAACTATA+AGG - chr2.2:23328466-23328485 MS.gene54143:CDS 25.0%
! TTGATAAGATCAATAGCAAT+AGG + chr2.2:23328267-23328286 None:intergenic 25.0%
!! ACTTTAGATTAGTTAATGTG+AGG - chr2.2:23330360-23330379 MS.gene54143:intron 25.0%
!! ATATTTTCACATAGAATCAG+GGG + chr2.2:23329491-23329510 None:intergenic 25.0%
!! CTTTAGATTAGTTAATGTGA+GGG - chr2.2:23330361-23330380 MS.gene54143:intron 25.0%
!! TTAATCCAAATATTTGGTGA+TGG + chr2.2:23331179-23331198 None:intergenic 25.0%
!! TTTAGATTAGTTAATGTGAG+GGG - chr2.2:23330362-23330381 MS.gene54143:intron 25.0%
!! TTTTGTCTTAATCATCTTTC+TGG - chr2.2:23328592-23328611 MS.gene54143:intron 25.0%
!!! AATGTTTGTTTTGACATCAA+TGG + chr2.2:23329915-23329934 None:intergenic 25.0%
!!! CACATTTTTCACTTTTTCTT+GGG - chr2.2:23330159-23330178 MS.gene54143:intron 25.0%
!!! GGAAGTAAGACTAAATTTTT+TGG + chr2.2:23329422-23329441 None:intergenic 25.0%
!!! TCACATTTTTCACTTTTTCT+TGG - chr2.2:23330158-23330177 MS.gene54143:intron 25.0%
!!! TTAGCTAATTGTTTTATCTG+CGG + chr2.2:23330972-23330991 None:intergenic 25.0%
AAAACACTTGTTTACTATCG+TGG - chr2.2:23329830-23329849 MS.gene54143:intron 30.0%
AAAGCAATATACTCAAATGG+AGG - chr2.2:23329779-23329798 MS.gene54143:intron 30.0%
AAGAAGAAATCACTATCGAA+AGG - chr2.2:23328439-23328458 MS.gene54143:CDS 30.0%
ACCAAATATTTGGATTAAGC+AGG - chr2.2:23331181-23331200 MS.gene54143:CDS 30.0%
AGAAGAAATCACTATCGAAA+GGG - chr2.2:23328440-23328459 MS.gene54143:CDS 30.0%
ATAATCAAACTATGTGTGTC+TGG + chr2.2:23328530-23328549 None:intergenic 30.0%
ATGTTTCATGTTGATCGTAA+TGG + chr2.2:23330821-23330840 None:intergenic 30.0%
GACAAAGCAATATACTCAAA+TGG - chr2.2:23329776-23329795 MS.gene54143:intron 30.0%
TAACACCATCACCAAATATT+TGG - chr2.2:23331171-23331190 MS.gene54143:CDS 30.0%
TAATCAAACTATGTGTGTCT+GGG + chr2.2:23328529-23328548 None:intergenic 30.0%
TAGGTTAATTCTTACACACA+TGG - chr2.2:23330106-23330125 MS.gene54143:intron 30.0%
TAGTTAGATGACAACATACT+TGG + chr2.2:23328327-23328346 None:intergenic 30.0%
TATACAGAAGTCAATATACC+TGG - chr2.2:23329647-23329666 MS.gene54143:CDS 30.0%
TCCTGCTTAATCCAAATATT+TGG + chr2.2:23331185-23331204 None:intergenic 30.0%
TGCCATAGACAAAAATCATT+AGG + chr2.2:23330887-23330906 None:intergenic 30.0%
TGTTTCATGTTGATCGTAAT+GGG + chr2.2:23330820-23330839 None:intergenic 30.0%
TTGCAAGCATTATAGCTTAT+TGG + chr2.2:23329255-23329274 None:intergenic 30.0%
! GTCCTAATGATTTTTGTCTA+TGG - chr2.2:23330882-23330901 MS.gene54143:intron 30.0%
! TCCTATATTTTCTTCCTCTT+TGG + chr2.2:23329700-23329719 None:intergenic 30.0%
!!! AAACTGATTGCTTTTTTCAC+TGG + chr2.2:23331138-23331157 None:intergenic 30.0%
!!! GAAATCATATTTTGGTCTAG+TGG - chr2.2:23329063-23329082 MS.gene54143:intron 30.0%
AAAGAAAGAAAAGAATGGGC+TGG + chr2.2:23328956-23328975 None:intergenic 35.0%
AGTAACAAGTTCTTCATCAG+TGG + chr2.2:23328214-23328233 None:intergenic 35.0%
ATATACTCAAATGGAGGAGA+AGG - chr2.2:23329785-23329804 MS.gene54143:intron 35.0%
ATCAGCATCATTCTTAGCAT+AGG + chr2.2:23329939-23329958 None:intergenic 35.0%
CACCAGAATGAACAACAATA+TGG - chr2.2:23331019-23331038 MS.gene54143:intron 35.0%
CATTTGTGTTTGGTTGTTGT+CGG - chr2.2:23329091-23329110 MS.gene54143:intron 35.0%
GAAGAAATCACTATCGAAAG+GGG - chr2.2:23328441-23328460 MS.gene54143:CDS 35.0%
GATAACCAAGTCAATGTGTT+TGG + chr2.2:23329230-23329249 None:intergenic 35.0%
GCCAAAGAGGAAGAAAATAT+AGG - chr2.2:23329696-23329715 MS.gene54143:CDS 35.0%
GTAACAAGTTCTTCATCAGT+GGG + chr2.2:23328213-23328232 None:intergenic 35.0%
GTTAGACCAAATAGAGTAAC+TGG - chr2.2:23329725-23329744 MS.gene54143:CDS 35.0%
TGAACATCATCACATTCATG+AGG - chr2.2:23331088-23331107 MS.gene54143:CDS 35.0%
TGTGAACAAGGATTTCAACA+TGG - chr2.2:23328131-23328150 MS.gene54143:CDS 35.0%
! AAGAAAGAAAAGAATGGGCT+GGG + chr2.2:23328955-23328974 None:intergenic 35.0%
! ATGCATCATCCAATCAGTTT+TGG + chr2.2:23329873-23329892 None:intergenic 35.0%
! CATGAATGTGATGATGTTCA+TGG + chr2.2:23331088-23331107 None:intergenic 35.0%
! CTCCATATTGTTGTTCATTC+TGG + chr2.2:23331024-23331043 None:intergenic 35.0%
! TAATCATCTTTCTGGAGAAG+TGG - chr2.2:23328600-23328619 MS.gene54143:intron 35.0%
! TTTGATAATTGGGATGAGCT+TGG - chr2.2:23331224-23331243 MS.gene54143:CDS 35.0%
!! GTTTTGACATCAATGGTTGA+TGG + chr2.2:23329908-23329927 None:intergenic 35.0%
!!! GGTTACTTTTTTTGCCAAAG+AGG - chr2.2:23329683-23329702 MS.gene54143:CDS 35.0%
AAACCAGCTAATAAAAGGCG+AGG + chr2.2:23330268-23330287 None:intergenic 40.0%
AACATACTTGGAAGATCCCA+AGG + chr2.2:23328315-23328334 None:intergenic 40.0%
ATAATATTCTATGCAGGGGC+GGG - chr2.2:23328893-23328912 MS.gene54143:intron 40.0%
CAATATACCTGGAGCAGAAA+AGG - chr2.2:23329658-23329677 MS.gene54143:CDS 40.0%
CATAATATTCTATGCAGGGG+CGG - chr2.2:23328892-23328911 MS.gene54143:intron 40.0%
GAAATGTTAACGAGTGCCTT+CGG + chr2.2:23330745-23330764 None:intergenic 40.0%
GGAGAAGGAAATGATTGTGT+TGG - chr2.2:23329800-23329819 MS.gene54143:intron 40.0%
TATATGTGTGTGTGTGTGTG+TGG - chr2.2:23329302-23329321 MS.gene54143:intron 40.0%
TCTATGGCATGCAGGAAATT+TGG - chr2.2:23330898-23330917 MS.gene54143:intron 40.0%
TGATCAGTCATCAGCTACAA+AGG - chr2.2:23328794-23328813 MS.gene54143:intron 40.0%
! GAACTCCAAACACATTGACT+TGG - chr2.2:23329222-23329241 MS.gene54143:intron 40.0%
! GATTTTTGTCTATGGCATGC+AGG - chr2.2:23330890-23330909 MS.gene54143:intron 40.0%
! TTACCTCGCCTTTTATTAGC+TGG - chr2.2:23330262-23330281 MS.gene54143:intron 40.0%
! TTTTCACATAGAATCAGGGG+CGG + chr2.2:23329488-23329507 None:intergenic 40.0%
!! GAAAAGGCACCAAAACTGAT+TGG - chr2.2:23329861-23329880 MS.gene54143:intron 40.0%
!! TCATGTTGATCGTAATGGGT+TGG + chr2.2:23330816-23330835 None:intergenic 40.0%
!! TCTGGATTTTGGAAAGCAAC+TGG - chr2.2:23329749-23329768 MS.gene54143:intron 40.0%
!!! ATCAGTTTTGGTGCCTTTTC+CGG + chr2.2:23329861-23329880 None:intergenic 40.0%
AACCCTAGTAGTTCGATAGC+AGG + chr2.2:23330338-23330357 None:intergenic 45.0%
ATACCTGGAGCAGAAAAGGA+AGG - chr2.2:23329662-23329681 MS.gene54143:CDS 45.0%
ATGAGCTTGGATCAGTTGTG+AGG - chr2.2:23331237-23331256 MS.gene54143:CDS 45.0%
CAAGTTCTTCATCAGTGGGA+TGG + chr2.2:23328209-23328228 None:intergenic 45.0%
CACCTGCTATCGAACTACTA+GGG - chr2.2:23330333-23330352 MS.gene54143:intron 45.0%
CCAGAGCCAGTTACTCTATT+TGG + chr2.2:23329734-23329753 None:intergenic 45.0%
TGGAATCGAAATCCAGGAAG+TGG + chr2.2:23328189-23328208 None:intergenic 45.0%
! CCAAATAGAGTAACTGGCTC+TGG - chr2.2:23329731-23329750 MS.gene54143:CDS 45.0%
! GATGATGATGTTCCACTTCC+TGG - chr2.2:23328174-23328193 MS.gene54143:CDS 45.0%
! GTTTACTATCGTGGTAGTGC+CGG - chr2.2:23329839-23329858 MS.gene54143:intron 45.0%
! TAACCTTCCTTTTCTGCTCC+AGG + chr2.2:23329668-23329687 None:intergenic 45.0%
!!! GAGTAACTGGCTCTGGATTT+TGG - chr2.2:23329738-23329757 MS.gene54143:CDS 45.0%
!! AGAAAATAATAAAATAATTA+AGG + chr2.2:23330446-23330465 None:intergenic 5.0%
!! ATAAAAAATTTACTAATTAA+AGG - chr2.2:23330705-23330724 MS.gene54143:intron 5.0%
!! TAAAAAATTTACTAATTAAA+GGG - chr2.2:23330706-23330725 MS.gene54143:intron 5.0%
AGTGGCGCGACATTTGTGTT+TGG - chr2.2:23329081-23329100 MS.gene54143:intron 50.0%
GCACCTGCTATCGAACTACT+AGG - chr2.2:23330332-23330351 MS.gene54143:intron 50.0%
GTGGGATGGAATCGAAATCC+AGG + chr2.2:23328195-23328214 None:intergenic 50.0%
! TATCGTGGTAGTGCCGGAAA+AGG - chr2.2:23329845-23329864 MS.gene54143:intron 50.0%
!! AAGAAAAGAATGGGCTGGGC+TGG + chr2.2:23328951-23328970 None:intergenic 50.0%
! GGGCTTAAAGAGTGCACCGA+AGG - chr2.2:23330726-23330745 MS.gene54143:intron 55.0%
!! AAGAATGGGCTGGGCTGGTG+TGG + chr2.2:23328946-23328965 None:intergenic 60.0%
CTATGCAGGGGCGGGTCTGT+GGG - chr2.2:23328901-23328920 MS.gene54143:intron 65.0%
GGTCTGTGGGAGGCTGAGTG+TGG - chr2.2:23328914-23328933 MS.gene54143:intron 65.0%
TCTATGCAGGGGCGGGTCTG+TGG - chr2.2:23328900-23328919 MS.gene54143:intron 65.0%
TGCAGGGGCGGGTCTGTGGG+AGG - chr2.2:23328904-23328923 MS.gene54143:intron 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 23328126 23331286 23328126 ID=MS.gene54143
chr2.2 mRNA 23328126 23331286 23328126 ID=MS.gene54143.t1;Parent=MS.gene54143
chr2.2 exon 23331085 23331286 23331085 ID=MS.gene54143.t1.exon1;Parent=MS.gene54143.t1
chr2.2 CDS 23331085 23331286 23331085 ID=cds.MS.gene54143.t1;Parent=MS.gene54143.t1
chr2.2 exon 23329439 23329758 23329439 ID=MS.gene54143.t1.exon2;Parent=MS.gene54143.t1
chr2.2 CDS 23329439 23329758 23329439 ID=cds.MS.gene54143.t1;Parent=MS.gene54143.t1
chr2.2 exon 23328126 23328500 23328126 ID=MS.gene54143.t1.exon3;Parent=MS.gene54143.t1
chr2.2 CDS 23328126 23328500 23328126 ID=cds.MS.gene54143.t1;Parent=MS.gene54143.t1
Gene Sequence

>MS.gene54143

ATGGGTGTGAACAAGGATTTCAACATGGATAATGAATATGTTGCAGATGATGATGATGTTCCACTTCCTGGATTTCGATTCCATCCCACTGATGAAGAACTTGTTACTTTTTATCTTCGAAGAAAACTTGATAAGAAACCTATTGCTATTGATCTTATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAGTATGTTGTCATCTAACTAATACTTTTGCTTTTTCTTTTATAAATTTTCAATTGATTCTTTTATAGTTCACACTTAAATTTACAAATATTAAAGATTAATAAATTTCTTATAAGAAGAAATCACTATCGAAAGGGGTTTCTAAATGACACAAACTATAAGGAAAAATGGAAGAAAAACATGTTGACAATATTTGCATGCCCAGACACACATAGTTTGATTATTGCATACATATACCTTAGTTATAACTACATTCAAGATTTTTCTTTTGTCTTAATCATCTTTCTGGAGAAGTGGTCATTTTTTTTTTTTATACTGCTGGAGACGTGATCATGATTATCAATAATTGGAAACCTTTTTATAAATCTAAGTATTGTGACAATTAATAAGAAAAAGTTATATTAGCTATGAAAATTTTAAAATAGAAAACATGAAATTTGTTACTAAATATATAAAATTGCAATATAGTGATCAGTCATCAGCTACAAAGGAATAATTACAATATATCTTAAATATACATGATTTTTTGCAGACATATAAAAACATGTAAAAGAAAAACACACAAACATAATATTCTATGCAGGGGCGGGTCTGTGGGAGGCTGAGTGTGGCTATTGCCACACCAGCCCAGCCCATTCTTTTCTTTCTTTTTTTTATATACAAAGCATAATTTTTTTTTTTTGAAATATAATGAGCATAATTATATAATATATATGTTCTATTTCGAAACATAATGTGAAATCATATTTTGGTCTAGTGGCGCGACATTTGTGTTTGGTTGTTGTCGGTTCAACTTTTAACTTTTGCGTTTTTTTAATAATTTTTTCATGATAATATAAACAACATAAACAAATAAATTTACTTGTAAAAATAAACTCAATGAGAGTCGAACTTGTGAACTCCAAACACATTGACTTGGTTATCTTCCAATAAGCTATAATGCTTGCAATGTTTTTTTTTTTTTTTGCAACTTTGATATATGTGTGTGTGTGTGTGTGGCGCGCGCGCGTGAATGTGTGCGTGTGCGCGCGCACGAGTTCTAAGATAAGATTTTGTAACTTACGTTGTGCATTATCTATTAATATTTATTTCTCCAAAAAATTTAGTCTTACTTCCTTTAAAAAAAAAAAATAGCCCCACTAATAATTTAATCTCAGATCCGCCCCTGATTCTATGTGAAAATATTATGCCTCAATTACACTGAAAAATATTCTATCCCACGTAATTCTCTCTATATATAGTGCAACTAATATTTGTTCTTCCTTTATTTTTCCTTTTCATTATAGGTAACTATACTAATTAATTTGTTACATACATTGTATATACAGAAGTCAATATACCTGGAGCAGAAAAGGAAGGTTACTTTTTTTGCCAAAGAGGAAGAAAATATAGGAACAGCGTTAGACCAAATAGAGTAACTGGCTCTGGATTTTGGAAAGCAACTGGAATAGACAAAGCAATATACTCAAATGGAGGAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTGTTTACTATCGTGGTAGTGCCGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCAACCATTGATGTCAAAACAAACATTTCCTATGCTAAGAATGATGCTGATTATGCTCATGAAGCTGTAAGTAACTTATATACCACCATCAAACTTTTATTGTATGTATATATGTTGATTTTGGAGTAGCTTTGCTCATAAAAGTTTGCTTATCAAAAACAAATATAAGACCTACATAATTTTTACAAATTTTGTACATAGGTTAATTCTTACACACATGGAATTTATTTCTCTCTTTCTAAATTTCTAGTCACATTTTTCACTTTTTCTTGGGATAAACATTCTTTACACTAAAAATTAAATTAGCTAAAGAGTCTCATATTTAATGAGATATGATTTAAACATGTTTGAGTTTTACCTCGCCTTTTATTAGCTGGTTTTTATAAGATTGAGAATGAACCCAAATTTATAGATAGAATGAGAGGCACCTGCTATCGAACTACTAGGGTTGCACTTTAGATTAGTTAATGTGAGGGGATGTAGTGCAAGTCTCACATTTAATTGATGCATGAATAATTTTATCATACCCTTTAATCCTTAATTATTTTATTATTTTCTCTTGGTAGTGACAAAAAAAAAATAGAGTGCATTTATTTAAACATTTTATTTTAAAAAATGTTAATAGAAATGAAAAGTGCTTGTTATCATCACAATAATCTAACTTGTAAAATTTTCTATCTTACATAAAAATGTAAAAAAAAAAAAAAAAAGTGTTCTTTTAGCATACCAAATTTAGCGATTATTCTTTTAAAAAGTCAACTATTATAATTTCTAATGCACTCAATACACAACTTTTCATAAAAAATTTACTAATTAAAGGGCTTAAAGAGTGCACCGAAGGCACTCGTTAACATTTCTCTTTTTTATAAGCAAGAATATTATTAATGGGGATTACAAGGGTTACTCCAACCCATTACGATCAACATGAAACATCAAATTAATTTATTTTATTTTTTTATATTGAACAAACATATGTCCTAATGATTTTTGTCTATGGCATGCAGGAAATTTGGACATTGTGTAGAATTCTCAAAAGAAATGTATCACAAAGGAAACAAATACCGCAGATAAAACAATTAGCTAACAAGCATCAAGTCAGTCATAACACGAGCACCAGAATGAACAACAATATGGAGTTCAACATAAATCAACAAACATATATAAATTTTGGTGCAAGCCATGAACATCATCACATTCATGAGGACAAATCAATCAATAACTATACAACCAGTGAAAAAAGCAATCAGTTTCATGCAAACAATGTAACACCATCACCAAATATTTGGATTAAGCAGGATGCTAATGAGTTGTTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAGGTTTGCTGTTGATTCACCTAGTTTGTAA
Protein sequence

>MS.gene54143.t1

MGVNKDFNMDNEYVADDDDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKVNIPGAEKEGYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKAIYSNGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSTIDVKTNISYAKNDADYAHEAEIWTLCRILKRNVSQRKQIPQIKQLANKHQVSHNTSTRMNNNMEFNINQQTYINFGASHEHHHIHEDKSINNYTTSEKSNQFHANNVTPSPNIWIKQDANELLSFDNWDELGSVVRFAVDSPSL