Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060257.t1 | GAU13242.1 | 67.1 | 780 | 236 | 11 | 127 | 897 | 1 | 768 | 1.40E-284 | 989.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060257.t1 | Q9FGH9 | 48.6 | 325 | 111 | 4 | 200 | 471 | 190 | 511 | 2.8e-76 | 288.5 |
| MS.gene060257.t1 | Q9FGH9 | 30.8 | 705 | 215 | 13 | 200 | 901 | 190 | 624 | 1.9e-72 | 275.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060257.t1 | A0A2Z6M369 | 67.1 | 780 | 236 | 11 | 127 | 897 | 1 | 768 | 9.8e-285 | 989.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene060257.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene060257 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene060257 | 0.803756 | 3.00E-49 | -1.69E-46 |
| MS.gene05265 | MS.gene060257 | 0.82104 | 4.99E-53 | -1.69E-46 |
| MS.gene05329 | MS.gene060257 | 0.803383 | 3.58E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene060257 | 0.826097 | 3.27E-54 | -1.69E-46 |
| MS.gene055229 | MS.gene060257 | 0.804997 | 1.65E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene060257 | 0.807227 | 5.60E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene060257 | 0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene060258 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene062815 | 0.818489 | 1.91E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene06372 | 0.800603 | 1.33E-48 | -1.69E-46 |
| MS.gene060257 | MS.gene064718 | 0.806099 | 9.70E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene065039 | 0.818618 | 1.78E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene066313 | 0.819363 | 1.21E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene066335 | 0.811041 | 8.53E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene066513 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene070301 | 0.813677 | 2.27E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene070818 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene072819 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene060257 | MS.gene072915 | 0.801576 | 8.44E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene073543 | 0.839777 | 1.29E-57 | -1.69E-46 |
| MS.gene060257 | MS.gene22612 | 0.805456 | 1.32E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene28530 | 0.812191 | 4.80E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene29036 | 0.832179 | 1.10E-55 | -1.69E-46 |
| MS.gene060257 | MS.gene29096 | 0.83311 | 6.44E-56 | -1.69E-46 |
| MS.gene060257 | MS.gene32184 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene32801 | 0.806962 | 6.37E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene33651 | 0.804914 | 1.72E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene36151 | 0.816943 | 4.26E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene37612 | 0.806362 | 8.54E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene43937 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene44972 | 0.806479 | 8.06E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene45963 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene46061 | 0.800475 | 1.42E-48 | -1.69E-46 |
| MS.gene060257 | MS.gene46133 | 0.852964 | 3.27E-61 | -1.69E-46 |
| MS.gene060257 | MS.gene48527 | 0.810043 | 1.40E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene53827 | 0.840319 | 9.34E-58 | -1.69E-46 |
| MS.gene060257 | MS.gene54143 | 0.819094 | 1.39E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene55108 | 0.801612 | 8.30E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene57128 | 0.803665 | 3.13E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene57292 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene58485 | 0.801719 | 7.89E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene58653 | 0.813548 | 2.42E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene60615 | 0.812049 | 5.15E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene61388 | 0.803726 | 3.04E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene61393 | 0.842139 | 3.10E-58 | -1.69E-46 |
| MS.gene060257 | MS.gene63897 | 0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene65003 | 0.807925 | 3.98E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene66545 | 0.80184 | 7.45E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene67067 | 0.807169 | 5.76E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene67735 | 0.846101 | 2.68E-59 | -1.69E-46 |
| MS.gene060257 | MS.gene68999 | 0.804125 | 2.51E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene71810 | 0.813995 | 1.93E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene73758 | 0.824137 | 9.50E-54 | -1.69E-46 |
| MS.gene060257 | MS.gene74758 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene76244 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene76755 | 0.827103 | 1.88E-54 | -1.69E-46 |
| MS.gene060257 | MS.gene77366 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene78362 | 0.811392 | 7.16E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene79568 | 0.817366 | 3.42E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene81047 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene060257 | MS.gene81982 | 0.806428 | 8.27E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene84994 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene93902 | 0.812662 | 3.79E-51 | -1.69E-46 |
| MS.gene060257 | MS.gene94674 | 0.800918 | 1.15E-48 | -1.69E-46 |
| MS.gene060257 | MS.gene95778 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene060257 | MS.gene96324 | 0.818746 | 1.67E-52 | -1.69E-46 |
| MS.gene060257 | MS.gene98179 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene99821 | 0.82362 | 1.26E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060257.t1 | MTR_5g073620 | 56.206 | 991 | 289 | 14 | 31 | 897 | 101 | 1070 | 0.0 | 1031 |
| MS.gene060257.t1 | MTR_5g073770 | 55.635 | 417 | 115 | 5 | 1 | 385 | 1 | 379 | 8.92e-144 | 433 |
| MS.gene060257.t1 | MTR_5g073480 | 53.533 | 368 | 146 | 4 | 31 | 395 | 101 | 446 | 1.46e-123 | 389 |
| MS.gene060257.t1 | MTR_5g073480 | 76.316 | 38 | 9 | 0 | 909 | 946 | 346 | 383 | 5.88e-11 | 67.0 |
| MS.gene060257.t1 | MTR_5g073460 | 46.624 | 474 | 161 | 7 | 1 | 403 | 1 | 453 | 1.78e-122 | 389 |
| MS.gene060257.t1 | MTR_5g073460 | 37.860 | 243 | 128 | 5 | 675 | 896 | 453 | 693 | 1.53e-32 | 135 |
| MS.gene060257.t1 | MTR_5g073780 | 72.368 | 228 | 60 | 2 | 670 | 897 | 1 | 225 | 7.30e-112 | 344 |
| MS.gene060257.t1 | MTR_5g074130 | 44.148 | 487 | 183 | 9 | 31 | 460 | 102 | 556 | 2.22e-105 | 345 |
| MS.gene060257.t1 | MTR_5g074130 | 45.992 | 237 | 115 | 4 | 670 | 894 | 439 | 674 | 3.91e-53 | 199 |
| MS.gene060257.t1 | MTR_5g073820 | 44.583 | 480 | 128 | 10 | 10 | 427 | 29 | 432 | 8.67e-105 | 335 |
| MS.gene060257.t1 | MTR_5g073650 | 52.500 | 360 | 121 | 7 | 36 | 393 | 5 | 316 | 2.97e-102 | 323 |
| MS.gene060257.t1 | MTR_5g073810 | 51.944 | 360 | 123 | 6 | 36 | 393 | 107 | 418 | 2.84e-99 | 318 |
| MS.gene060257.t1 | MTR_5g073450 | 48.961 | 337 | 107 | 6 | 197 | 471 | 192 | 525 | 3.42e-88 | 296 |
| MS.gene060257.t1 | MTR_5g073450 | 37.712 | 236 | 125 | 5 | 681 | 896 | 401 | 634 | 1.24e-35 | 144 |
| MS.gene060257.t1 | MTR_3g031130 | 44.248 | 339 | 121 | 7 | 198 | 471 | 183 | 518 | 6.86e-75 | 259 |
| MS.gene060257.t1 | MTR_3g031130 | 41.102 | 236 | 110 | 6 | 681 | 896 | 394 | 620 | 1.16e-39 | 157 |
| MS.gene060257.t1 | MTR_5g073920 | 43.014 | 365 | 163 | 8 | 31 | 391 | 98 | 421 | 4.11e-74 | 259 |
| MS.gene060257.t1 | MTR_5g073920 | 39.928 | 278 | 145 | 6 | 667 | 934 | 426 | 691 | 5.05e-52 | 195 |
| MS.gene060257.t1 | MTR_5g073960 | 43.820 | 356 | 159 | 8 | 31 | 385 | 101 | 416 | 2.07e-72 | 246 |
| MS.gene060257.t1 | MTR_3g464010 | 40.049 | 412 | 173 | 8 | 12 | 395 | 65 | 430 | 3.83e-71 | 249 |
| MS.gene060257.t1 | MTR_3g464010 | 43.096 | 239 | 121 | 4 | 670 | 896 | 434 | 669 | 3.36e-51 | 192 |
| MS.gene060257.t1 | MTR_5g073660 | 46.326 | 313 | 90 | 5 | 10 | 289 | 29 | 296 | 2.91e-69 | 233 |
| MS.gene060257.t1 | MTR_5g073610 | 51.562 | 256 | 82 | 5 | 31 | 284 | 102 | 317 | 8.94e-68 | 230 |
| MS.gene060257.t1 | MTR_5g073750 | 56.585 | 205 | 65 | 4 | 31 | 234 | 101 | 282 | 7.93e-52 | 184 |
| MS.gene060257.t1 | MTR_5g073470 | 37.179 | 312 | 95 | 5 | 1 | 265 | 1 | 258 | 3.93e-47 | 170 |
| MS.gene060257.t1 | MTR_5g093530 | 54.144 | 181 | 57 | 3 | 31 | 211 | 102 | 256 | 4.57e-47 | 178 |
| MS.gene060257.t1 | MTR_5g093530 | 41.277 | 235 | 106 | 4 | 670 | 894 | 359 | 571 | 8.20e-43 | 165 |
| MS.gene060257.t1 | MTR_5g093530 | 33.195 | 241 | 99 | 5 | 277 | 460 | 241 | 476 | 1.87e-22 | 103 |
| MS.gene060257.t1 | MTR_4g103540 | 28.814 | 354 | 182 | 5 | 194 | 482 | 236 | 584 | 3.63e-43 | 168 |
| MS.gene060257.t1 | MTR_4g103540 | 35.593 | 177 | 110 | 3 | 722 | 896 | 507 | 681 | 8.52e-22 | 101 |
| MS.gene060257.t1 | MTR_1g090620 | 30.671 | 313 | 163 | 4 | 209 | 470 | 208 | 517 | 7.41e-42 | 164 |
| MS.gene060257.t1 | MTR_1g090620 | 27.935 | 247 | 154 | 4 | 672 | 895 | 396 | 641 | 7.85e-23 | 105 |
| MS.gene060257.t1 | MTR_1g057560 | 28.834 | 326 | 178 | 3 | 196 | 470 | 189 | 511 | 9.86e-39 | 154 |
| MS.gene060257.t1 | MTR_1g057560 | 28.511 | 235 | 154 | 4 | 672 | 893 | 390 | 623 | 1.26e-21 | 100 |
| MS.gene060257.t1 | MTR_5g074450 | 57.143 | 154 | 61 | 4 | 31 | 182 | 101 | 251 | 1.68e-37 | 149 |
| MS.gene060257.t1 | MTR_8g021330 | 38.421 | 190 | 114 | 2 | 206 | 394 | 161 | 348 | 1.38e-35 | 144 |
| MS.gene060257.t1 | MTR_8g021330 | 29.379 | 177 | 120 | 2 | 724 | 895 | 429 | 605 | 2.81e-16 | 84.0 |
| MS.gene060257.t1 | MTR_5g067680 | 45.631 | 206 | 91 | 9 | 488 | 676 | 124 | 325 | 1.11e-32 | 130 |
| MS.gene060257.t1 | MTR_5g073900 | 44.118 | 170 | 80 | 3 | 224 | 392 | 1 | 156 | 3.85e-32 | 129 |
| MS.gene060257.t1 | MTR_5g073900 | 35.437 | 206 | 100 | 3 | 671 | 867 | 164 | 345 | 4.24e-24 | 105 |
| MS.gene060257.t1 | MTR_7g013770 | 30.288 | 208 | 133 | 2 | 187 | 394 | 217 | 412 | 4.86e-30 | 127 |
| MS.gene060257.t1 | MTR_7g013770 | 35.602 | 191 | 108 | 5 | 724 | 910 | 498 | 677 | 5.79e-23 | 105 |
| MS.gene060257.t1 | MTR_5g073840 | 51.908 | 131 | 51 | 3 | 33 | 151 | 103 | 233 | 1.35e-27 | 113 |
| MS.gene060257.t1 | MTR_5g074190 | 63.736 | 91 | 33 | 0 | 29 | 119 | 93 | 183 | 8.12e-27 | 116 |
| MS.gene060257.t1 | MTR_5g074190 | 30.000 | 230 | 93 | 6 | 672 | 893 | 238 | 407 | 2.08e-17 | 87.0 |
| MS.gene060257.t1 | MTR_6g033310 | 33.679 | 193 | 126 | 1 | 208 | 400 | 284 | 474 | 4.65e-26 | 115 |
| MS.gene060257.t1 | MTR_6g033310 | 30.811 | 185 | 126 | 1 | 714 | 896 | 542 | 726 | 1.08e-21 | 101 |
| MS.gene060257.t1 | MTR_1g067480 | 32.057 | 209 | 128 | 4 | 192 | 394 | 152 | 352 | 1.07e-25 | 113 |
| MS.gene060257.t1 | MTR_3g025900 | 31.016 | 187 | 127 | 1 | 206 | 392 | 181 | 365 | 6.51e-25 | 111 |
| MS.gene060257.t1 | MTR_3g025900 | 30.636 | 173 | 114 | 2 | 725 | 897 | 444 | 610 | 7.16e-14 | 76.3 |
| MS.gene060257.t1 | MTR_5g073880 | 38.021 | 192 | 75 | 5 | 31 | 222 | 102 | 249 | 7.39e-25 | 105 |
| MS.gene060257.t1 | MTR_1g067460 | 32.308 | 195 | 118 | 4 | 206 | 394 | 164 | 350 | 3.22e-24 | 108 |
| MS.gene060257.t1 | MTR_4g062330 | 29.545 | 220 | 145 | 3 | 191 | 402 | 148 | 365 | 1.15e-23 | 107 |
| MS.gene060257.t1 | MTR_7g026630 | 34.615 | 182 | 113 | 5 | 224 | 402 | 228 | 406 | 9.77e-23 | 104 |
| MS.gene060257.t1 | MTR_7g026630 | 29.442 | 197 | 136 | 2 | 701 | 895 | 455 | 650 | 9.64e-22 | 101 |
| MS.gene060257.t1 | MTR_2g096230 | 28.780 | 205 | 140 | 3 | 202 | 403 | 153 | 354 | 1.33e-22 | 103 |
| MS.gene060257.t1 | MTR_2g096230 | 30.357 | 168 | 102 | 4 | 729 | 895 | 428 | 581 | 2.56e-11 | 67.8 |
| MS.gene060257.t1 | MTR_5g073490 | 38.650 | 163 | 82 | 3 | 736 | 896 | 9 | 155 | 4.66e-22 | 94.0 |
| MS.gene060257.t1 | MTR_1g117090 | 29.126 | 206 | 144 | 1 | 699 | 902 | 470 | 675 | 7.93e-22 | 102 |
| MS.gene060257.t1 | MTR_1g117090 | 30.201 | 149 | 102 | 1 | 205 | 353 | 197 | 343 | 5.57e-15 | 79.7 |
| MS.gene060257.t1 | MTR_5g074090 | 69.118 | 68 | 21 | 0 | 33 | 100 | 104 | 171 | 1.74e-21 | 95.1 |
| MS.gene060257.t1 | MTR_5g074070 | 36.150 | 213 | 58 | 7 | 1 | 151 | 1 | 197 | 9.60e-21 | 93.2 |
| MS.gene060257.t1 | MTR_5g074150 | 67.647 | 68 | 22 | 0 | 33 | 100 | 114 | 181 | 1.74e-20 | 92.4 |
| MS.gene060257.t1 | MTR_5g074200 | 60.256 | 78 | 31 | 0 | 33 | 110 | 100 | 177 | 2.99e-19 | 90.5 |
| MS.gene060257.t1 | MTR_3g090860 | 50.000 | 72 | 34 | 1 | 566 | 635 | 134 | 205 | 2.99e-17 | 84.7 |
| MS.gene060257.t1 | MTR_8g099350 | 52.174 | 69 | 31 | 1 | 565 | 631 | 132 | 200 | 2.43e-16 | 82.4 |
| MS.gene060257.t1 | MTR_2g083870 | 32.044 | 181 | 105 | 6 | 526 | 698 | 43 | 213 | 1.55e-15 | 78.2 |
| MS.gene060257.t1 | MTR_5g073850 | 41.284 | 109 | 53 | 1 | 13 | 110 | 1 | 109 | 2.08e-15 | 75.5 |
| MS.gene060257.t1 | MTR_8g027860 | 46.914 | 81 | 40 | 2 | 565 | 642 | 136 | 216 | 3.93e-15 | 78.6 |
| MS.gene060257.t1 | MTR_7g117200 | 51.515 | 66 | 30 | 1 | 566 | 629 | 119 | 184 | 7.41e-15 | 77.4 |
| MS.gene060257.t1 | MTR_3g093830 | 43.421 | 76 | 39 | 2 | 566 | 639 | 128 | 201 | 1.76e-14 | 75.9 |
| MS.gene060257.t1 | MTR_5g016610 | 41.111 | 90 | 47 | 2 | 539 | 626 | 175 | 260 | 2.07e-14 | 75.1 |
| MS.gene060257.t1 | MTR_2g075750 | 45.714 | 70 | 36 | 1 | 559 | 626 | 22 | 91 | 2.47e-14 | 72.8 |
| MS.gene060257.t1 | MTR_4g127040 | 47.059 | 68 | 36 | 0 | 553 | 620 | 233 | 300 | 2.66e-14 | 75.5 |
| MS.gene060257.t1 | MTR_4g094908 | 41.111 | 90 | 47 | 2 | 538 | 625 | 241 | 326 | 3.28e-14 | 75.5 |
| MS.gene060257.t1 | MTR_2g075680 | 53.226 | 62 | 27 | 1 | 566 | 625 | 149 | 210 | 3.46e-14 | 75.1 |
| MS.gene060257.t1 | MTR_5g067700 | 38.144 | 97 | 51 | 3 | 566 | 657 | 107 | 199 | 5.67e-14 | 73.2 |
| MS.gene060257.t1 | MTR_8g087000 | 38.202 | 89 | 46 | 1 | 555 | 634 | 67 | 155 | 6.86e-14 | 72.8 |
| MS.gene060257.t1 | MTR_8g087000 | 38.202 | 89 | 46 | 1 | 555 | 634 | 66 | 154 | 8.46e-14 | 72.8 |
| MS.gene060257.t1 | MTR_2g075610 | 48.438 | 64 | 31 | 1 | 565 | 626 | 29 | 92 | 1.49e-13 | 70.5 |
| MS.gene060257.t1 | MTR_2g032030 | 38.636 | 88 | 48 | 2 | 536 | 620 | 238 | 322 | 2.14e-13 | 73.9 |
| MS.gene060257.t1 | MTR_2g032030 | 38.636 | 88 | 48 | 2 | 536 | 620 | 238 | 322 | 3.90e-13 | 73.6 |
| MS.gene060257.t1 | MTR_1g009613 | 42.647 | 68 | 39 | 0 | 553 | 620 | 250 | 317 | 4.30e-13 | 72.0 |
| MS.gene060257.t1 | MTR_2g075700 | 50.847 | 59 | 27 | 1 | 566 | 622 | 145 | 203 | 6.43e-13 | 71.2 |
| MS.gene060257.t1 | MTR_1g070455 | 44.118 | 68 | 38 | 0 | 553 | 620 | 281 | 348 | 7.25e-13 | 71.6 |
| MS.gene060257.t1 | MTR_2g075690 | 48.387 | 62 | 30 | 1 | 566 | 625 | 142 | 203 | 1.22e-12 | 70.1 |
| MS.gene060257.t1 | MTR_4g023690 | 65.854 | 41 | 14 | 0 | 31 | 71 | 46 | 86 | 1.33e-12 | 64.7 |
| MS.gene060257.t1 | MTR_7g073430 | 36.697 | 109 | 58 | 5 | 565 | 665 | 122 | 227 | 1.65e-12 | 69.7 |
| MS.gene060257.t1 | MTR_2g016770 | 31.624 | 117 | 66 | 2 | 564 | 680 | 26 | 128 | 2.38e-12 | 67.8 |
| MS.gene060257.t1 | MTR_6g078770 | 40.000 | 90 | 54 | 0 | 32 | 121 | 194 | 283 | 2.41e-12 | 70.1 |
| MS.gene060257.t1 | MTR_1g099600 | 36.458 | 96 | 51 | 2 | 525 | 620 | 155 | 240 | 2.63e-12 | 69.3 |
| MS.gene060257.t1 | MTR_2g016770 | 31.624 | 117 | 66 | 2 | 564 | 680 | 34 | 136 | 2.76e-12 | 67.8 |
| MS.gene060257.t1 | MTR_7g073380 | 45.161 | 62 | 32 | 1 | 565 | 624 | 123 | 184 | 2.93e-12 | 68.9 |
| MS.gene060257.t1 | MTR_8g098945 | 50.909 | 55 | 27 | 0 | 566 | 620 | 130 | 184 | 3.16e-12 | 68.6 |
| MS.gene060257.t1 | MTR_0002s1250 | 28.986 | 138 | 89 | 3 | 566 | 696 | 112 | 247 | 8.30e-12 | 67.0 |
| MS.gene060257.t1 | MTR_6g078620 | 43.243 | 74 | 42 | 0 | 32 | 105 | 147 | 220 | 9.78e-12 | 66.2 |
| MS.gene060257.t1 | MTR_7g109600 | 32.039 | 103 | 64 | 1 | 560 | 662 | 48 | 144 | 1.00e-11 | 67.0 |
| MS.gene060257.t1 | MTR_7g100510 | 36.885 | 122 | 64 | 5 | 512 | 627 | 308 | 422 | 1.41e-11 | 68.2 |
| MS.gene060257.t1 | MTR_8g005750 | 46.667 | 60 | 30 | 1 | 566 | 623 | 104 | 163 | 1.65e-11 | 66.6 |
| MS.gene060257.t1 | MTR_8g032510 | 35.870 | 92 | 48 | 3 | 566 | 649 | 120 | 208 | 2.45e-11 | 66.2 |
| MS.gene060257.t1 | MTR_7g079010 | 34.677 | 124 | 69 | 5 | 524 | 636 | 91 | 213 | 2.77e-11 | 64.7 |
| MS.gene060257.t1 | MTR_2g024350 | 45.614 | 57 | 31 | 0 | 564 | 620 | 7 | 63 | 2.98e-11 | 64.7 |
| MS.gene060257.t1 | MTR_7g109800 | 32.743 | 113 | 61 | 3 | 537 | 649 | 125 | 222 | 6.86e-11 | 64.7 |
| MS.gene060257.t1 | MTR_0117s0040 | 41.250 | 80 | 45 | 1 | 541 | 620 | 52 | 129 | 7.01e-11 | 63.9 |
| MS.gene060257.t1 | MTR_7g028415 | 48.214 | 56 | 28 | 1 | 566 | 621 | 94 | 148 | 7.19e-11 | 62.4 |
| MS.gene060257.t1 | MTR_7g028710 | 48.214 | 56 | 28 | 1 | 566 | 621 | 94 | 148 | 7.19e-11 | 62.4 |
| MS.gene060257.t1 | MTR_8g028565 | 50.000 | 56 | 28 | 0 | 566 | 621 | 156 | 211 | 7.21e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060257.t1 | AT5G58430 | 48.308 | 325 | 112 | 4 | 200 | 471 | 190 | 511 | 3.63e-81 | 276 |
| MS.gene060257.t1 | AT5G58430 | 39.407 | 236 | 131 | 4 | 676 | 901 | 391 | 624 | 7.19e-35 | 142 |
| MS.gene060257.t1 | AT5G58430 | 71.795 | 39 | 11 | 0 | 909 | 947 | 283 | 321 | 5.84e-11 | 67.0 |
| MS.gene060257.t1 | AT1G07000 | 39.755 | 327 | 139 | 6 | 200 | 471 | 172 | 495 | 2.83e-64 | 228 |
| MS.gene060257.t1 | AT1G07000 | 30.667 | 225 | 134 | 6 | 681 | 893 | 380 | 594 | 1.52e-22 | 103 |
| MS.gene060257.t1 | AT5G50380 | 30.154 | 325 | 162 | 6 | 203 | 468 | 232 | 550 | 2.79e-43 | 169 |
| MS.gene060257.t1 | AT5G50380 | 30.488 | 246 | 142 | 6 | 679 | 897 | 430 | 673 | 5.45e-22 | 102 |
| MS.gene060257.t1 | AT5G03540 | 30.323 | 310 | 161 | 3 | 217 | 474 | 95 | 401 | 2.80e-41 | 160 |
| MS.gene060257.t1 | AT5G03540 | 30.165 | 242 | 150 | 5 | 672 | 895 | 275 | 515 | 6.04e-26 | 114 |
| MS.gene060257.t1 | AT5G03540 | 30.323 | 310 | 161 | 3 | 217 | 474 | 210 | 516 | 7.31e-41 | 160 |
| MS.gene060257.t1 | AT5G03540 | 30.165 | 242 | 150 | 5 | 672 | 895 | 390 | 630 | 1.31e-25 | 113 |
| MS.gene060257.t1 | AT5G03540 | 30.323 | 310 | 161 | 3 | 217 | 474 | 236 | 542 | 1.68e-40 | 160 |
| MS.gene060257.t1 | AT5G03540 | 30.165 | 242 | 150 | 5 | 672 | 895 | 416 | 656 | 1.69e-25 | 113 |
| MS.gene060257.t1 | AT5G52340 | 28.435 | 313 | 170 | 3 | 209 | 470 | 202 | 511 | 5.47e-38 | 152 |
| MS.gene060257.t1 | AT5G52340 | 30.638 | 235 | 151 | 5 | 672 | 895 | 390 | 623 | 1.45e-24 | 110 |
| MS.gene060257.t1 | AT1G72470 | 35.678 | 199 | 120 | 3 | 199 | 393 | 171 | 365 | 4.59e-32 | 134 |
| MS.gene060257.t1 | AT1G72470 | 29.944 | 177 | 119 | 2 | 724 | 895 | 445 | 621 | 2.02e-16 | 84.3 |
| MS.gene060257.t1 | AT3G14090 | 33.158 | 190 | 124 | 2 | 206 | 394 | 173 | 360 | 5.03e-31 | 130 |
| MS.gene060257.t1 | AT3G14090 | 33.143 | 175 | 112 | 2 | 729 | 898 | 442 | 616 | 5.81e-19 | 92.4 |
| MS.gene060257.t1 | AT1G54090 | 34.010 | 197 | 125 | 3 | 206 | 401 | 170 | 362 | 6.30e-31 | 130 |
| MS.gene060257.t1 | AT1G54090 | 30.978 | 184 | 122 | 2 | 721 | 899 | 432 | 615 | 7.18e-18 | 89.0 |
| MS.gene060257.t1 | AT5G13990 | 30.159 | 315 | 154 | 7 | 217 | 470 | 264 | 573 | 2.04e-29 | 125 |
| MS.gene060257.t1 | AT5G13990 | 33.508 | 191 | 120 | 3 | 710 | 896 | 495 | 682 | 9.17e-24 | 108 |
| MS.gene060257.t1 | AT3G29400 | 30.729 | 192 | 131 | 1 | 203 | 394 | 194 | 383 | 7.02e-27 | 117 |
| MS.gene060257.t1 | AT3G29400 | 30.851 | 188 | 119 | 4 | 724 | 905 | 475 | 657 | 1.90e-15 | 81.3 |
| MS.gene060257.t1 | AT5G52350 | 25.641 | 312 | 178 | 4 | 209 | 469 | 156 | 464 | 9.75e-25 | 110 |
| MS.gene060257.t1 | AT5G52350 | 28.519 | 270 | 168 | 6 | 648 | 895 | 311 | 577 | 1.63e-22 | 103 |
| MS.gene060257.t1 | AT5G13150 | 32.039 | 206 | 137 | 2 | 699 | 902 | 447 | 651 | 2.04e-24 | 110 |
| MS.gene060257.t1 | AT5G13150 | 36.559 | 186 | 107 | 4 | 211 | 393 | 209 | 386 | 1.01e-22 | 104 |
| MS.gene060257.t1 | AT5G59730 | 29.717 | 212 | 136 | 4 | 192 | 402 | 155 | 354 | 4.70e-23 | 105 |
| MS.gene060257.t1 | AT5G59730 | 29.717 | 212 | 136 | 4 | 192 | 402 | 155 | 354 | 6.45e-23 | 105 |
| MS.gene060257.t1 | AT2G39380 | 29.902 | 204 | 130 | 2 | 212 | 404 | 170 | 371 | 1.38e-22 | 104 |
| MS.gene060257.t1 | AT2G40740 | 36.424 | 151 | 86 | 7 | 475 | 622 | 89 | 232 | 1.33e-20 | 94.0 |
| MS.gene060257.t1 | AT2G40740 | 36.424 | 151 | 86 | 7 | 475 | 622 | 98 | 241 | 1.34e-20 | 94.0 |
| MS.gene060257.t1 | AT3G55150 | 28.191 | 188 | 133 | 1 | 217 | 404 | 187 | 372 | 1.32e-19 | 94.7 |
| MS.gene060257.t1 | AT2G28640 | 29.189 | 185 | 129 | 1 | 210 | 394 | 153 | 335 | 1.69e-19 | 94.4 |
| MS.gene060257.t1 | AT2G28640 | 30.723 | 166 | 104 | 5 | 731 | 895 | 423 | 578 | 1.15e-11 | 69.3 |
| MS.gene060257.t1 | AT1G07725 | 29.121 | 182 | 125 | 2 | 212 | 393 | 175 | 352 | 7.06e-19 | 92.4 |
| MS.gene060257.t1 | AT1G07725 | 28.916 | 166 | 104 | 4 | 731 | 895 | 439 | 591 | 1.99e-11 | 68.6 |
| MS.gene060257.t1 | AT2G28650 | 30.508 | 177 | 120 | 2 | 217 | 392 | 152 | 326 | 1.62e-18 | 90.9 |
| MS.gene060257.t1 | AT4G11070 | 37.226 | 137 | 64 | 4 | 506 | 630 | 50 | 176 | 2.32e-18 | 87.0 |
| MS.gene060257.t1 | AT4G11070 | 37.226 | 137 | 64 | 4 | 506 | 630 | 82 | 208 | 2.96e-18 | 87.4 |
| MS.gene060257.t1 | AT5G24110 | 33.544 | 158 | 78 | 5 | 520 | 663 | 60 | 204 | 1.13e-17 | 85.5 |
| MS.gene060257.t1 | AT4G23810 | 38.793 | 116 | 56 | 4 | 553 | 654 | 138 | 252 | 4.51e-17 | 84.0 |
| MS.gene060257.t1 | AT3G09530 | 26.636 | 214 | 152 | 3 | 194 | 404 | 147 | 358 | 1.02e-16 | 85.5 |
| MS.gene060257.t1 | AT5G61010 | 23.673 | 245 | 171 | 4 | 207 | 451 | 205 | 433 | 1.17e-16 | 85.1 |
| MS.gene060257.t1 | AT5G61010 | 31.073 | 177 | 95 | 5 | 725 | 893 | 467 | 624 | 1.28e-15 | 82.0 |
| MS.gene060257.t1 | AT5G61010 | 23.673 | 245 | 171 | 4 | 207 | 451 | 205 | 433 | 1.17e-16 | 85.1 |
| MS.gene060257.t1 | AT5G61010 | 31.073 | 177 | 95 | 5 | 725 | 893 | 467 | 624 | 1.28e-15 | 82.0 |
| MS.gene060257.t1 | AT3G56400 | 31.481 | 162 | 98 | 6 | 565 | 715 | 120 | 279 | 2.64e-16 | 81.3 |
| MS.gene060257.t1 | AT3G09520 | 24.766 | 214 | 143 | 5 | 201 | 404 | 159 | 364 | 8.63e-16 | 82.4 |
| MS.gene060257.t1 | AT2G46400 | 45.679 | 81 | 38 | 3 | 566 | 643 | 105 | 182 | 5.69e-15 | 77.4 |
| MS.gene060257.t1 | AT5G52830 | 42.529 | 87 | 40 | 2 | 566 | 648 | 166 | 246 | 6.84e-14 | 74.7 |
| MS.gene060257.t1 | AT3G58710 | 35.870 | 92 | 58 | 1 | 530 | 620 | 35 | 126 | 1.27e-13 | 72.8 |
| MS.gene060257.t1 | AT2G30590 | 40.244 | 82 | 47 | 1 | 539 | 620 | 289 | 368 | 4.86e-13 | 72.4 |
| MS.gene060257.t1 | AT2G23320 | 36.782 | 87 | 53 | 1 | 539 | 625 | 216 | 300 | 6.44e-13 | 71.2 |
| MS.gene060257.t1 | AT1G66550 | 37.931 | 87 | 51 | 2 | 539 | 622 | 81 | 167 | 7.57e-13 | 70.1 |
| MS.gene060257.t1 | AT2G34830 | 38.636 | 88 | 48 | 2 | 536 | 620 | 195 | 279 | 1.14e-12 | 71.6 |
| MS.gene060257.t1 | AT3G58710 | 36.957 | 92 | 56 | 2 | 530 | 620 | 35 | 125 | 1.16e-12 | 69.7 |
| MS.gene060257.t1 | AT2G34830 | 38.636 | 88 | 48 | 2 | 536 | 620 | 186 | 270 | 1.21e-12 | 71.6 |
| MS.gene060257.t1 | AT4G31540 | 27.439 | 164 | 112 | 4 | 736 | 894 | 494 | 655 | 1.55e-12 | 72.0 |
| MS.gene060257.t1 | AT1G66550 | 42.857 | 70 | 37 | 2 | 556 | 622 | 93 | 162 | 1.84e-12 | 68.9 |
| MS.gene060257.t1 | AT1G66560 | 43.243 | 74 | 32 | 2 | 551 | 622 | 97 | 162 | 2.00e-12 | 68.9 |
| MS.gene060257.t1 | AT2G40750 | 30.973 | 113 | 73 | 2 | 563 | 670 | 150 | 262 | 6.18e-12 | 68.6 |
| MS.gene060257.t1 | AT1G30650 | 37.500 | 88 | 49 | 2 | 536 | 620 | 188 | 272 | 6.95e-12 | 69.3 |
| MS.gene060257.t1 | AT5G45260 | 38.202 | 89 | 45 | 2 | 534 | 620 | 1185 | 1265 | 8.68e-12 | 70.1 |
| MS.gene060257.t1 | AT4G31550 | 38.554 | 83 | 49 | 1 | 538 | 620 | 221 | 301 | 9.84e-12 | 67.8 |
| MS.gene060257.t1 | AT5G22570 | 44.615 | 65 | 34 | 1 | 566 | 628 | 111 | 175 | 1.74e-11 | 66.6 |
| MS.gene060257.t1 | AT5G28650 | 36.585 | 82 | 50 | 1 | 539 | 620 | 238 | 317 | 1.99e-11 | 67.0 |
| MS.gene060257.t1 | AT1G66600 | 47.059 | 68 | 32 | 2 | 559 | 622 | 95 | 162 | 2.49e-11 | 65.5 |
| MS.gene060257.t1 | AT5G01900 | 34.343 | 99 | 61 | 2 | 530 | 624 | 73 | 171 | 2.66e-11 | 65.9 |
| MS.gene060257.t1 | AT1G29280 | 35.789 | 95 | 54 | 3 | 530 | 620 | 38 | 129 | 2.72e-11 | 65.5 |
| MS.gene060257.t1 | AT4G23550 | 38.202 | 89 | 51 | 1 | 566 | 654 | 141 | 225 | 3.23e-11 | 66.2 |
| MS.gene060257.t1 | AT3G04670 | 36.585 | 82 | 50 | 1 | 539 | 620 | 238 | 317 | 3.48e-11 | 66.2 |
| MS.gene060257.t1 | AT2G04880 | 30.625 | 160 | 87 | 5 | 483 | 624 | 212 | 365 | 3.49e-11 | 67.4 |
| MS.gene060257.t1 | AT4G31800 | 41.176 | 68 | 40 | 0 | 553 | 620 | 99 | 166 | 3.53e-11 | 65.1 |
| MS.gene060257.t1 | AT4G31550 | 45.614 | 57 | 31 | 0 | 564 | 620 | 244 | 300 | 3.69e-11 | 66.2 |
| MS.gene060257.t1 | AT2G46130 | 45.070 | 71 | 34 | 3 | 566 | 633 | 31 | 99 | 4.08e-11 | 61.2 |
| MS.gene060257.t1 | AT2G37260 | 46.154 | 65 | 34 | 1 | 565 | 629 | 349 | 412 | 4.62e-11 | 66.6 |
| MS.gene060257.t1 | AT4G24240 | 36.264 | 91 | 52 | 2 | 539 | 627 | 257 | 343 | 4.73e-11 | 66.2 |
| MS.gene060257.t1 | AT5G41570 | 41.429 | 70 | 38 | 2 | 566 | 633 | 99 | 167 | 4.86e-11 | 63.2 |
| MS.gene060257.t1 | AT2G37260 | 46.154 | 65 | 34 | 1 | 565 | 629 | 269 | 332 | 4.86e-11 | 65.9 |
| MS.gene060257.t1 | AT2G37260 | 46.154 | 65 | 34 | 1 | 565 | 629 | 267 | 330 | 4.88e-11 | 65.9 |
| MS.gene060257.t1 | AT1G64000 | 41.429 | 70 | 38 | 2 | 566 | 633 | 115 | 183 | 5.22e-11 | 63.5 |
| MS.gene060257.t1 | AT2G24570 | 34.615 | 104 | 63 | 2 | 517 | 620 | 200 | 298 | 6.72e-11 | 65.5 |
Find 194 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGGCCTTTGATGGTTTC+TGG | 0.098731 | 5.4:-60196357 | None:intergenic |
| TTTGAATAAGATTTGAATTT+TGG | 0.143291 | 5.4:-60196248 | None:intergenic |
| GCATCAGCCACTTCTGAATT+TGG | 0.163096 | 5.4:-60195534 | None:intergenic |
| TACTGAAATATTATGTTCTA+TGG | 0.165290 | 5.4:-60201681 | None:intergenic |
| GTCTCTCCCGTACCACAATT+TGG | 0.184770 | 5.4:+60200479 | MS.gene060257:CDS |
| ATACTTGATAATTTGTTTCT+TGG | 0.188726 | 5.4:+60201929 | MS.gene060257:CDS |
| CTTTGTGATCGCATCTTCTT+TGG | 0.189492 | 5.4:+60196615 | MS.gene060257:CDS |
| AATCTTCATCGGGAAGTTTC+AGG | 0.234190 | 5.4:+60201847 | MS.gene060257:CDS |
| CGCTGCTGATTTGTCCTTCA+TGG | 0.236903 | 5.4:+60196647 | MS.gene060257:CDS |
| TGCCTAGAGCTTAGATTATT+CGG | 0.241576 | 5.4:+60196468 | MS.gene060257:CDS |
| ATTAATTAGCAGCAGGAAAA+AGG | 0.247726 | 5.4:+60200427 | MS.gene060257:intron |
| AAATTGCAGTTATTCTTTCT+TGG | 0.262369 | 5.4:+60195970 | MS.gene060257:CDS |
| AACATCTCCACCATAACTTT+TGG | 0.262941 | 5.4:-60197183 | None:intergenic |
| AATCGGCAAAATCTAGAAAT+TGG | 0.272374 | 5.4:-60196692 | None:intergenic |
| GAATTCCTCAATGAGGATTA+TGG | 0.274324 | 5.4:+60196917 | MS.gene060257:CDS |
| CAAAATAATGCCTCAAAATC+TGG | 0.283645 | 5.4:-60196792 | None:intergenic |
| CAGACCACCATAGTAGAATT+TGG | 0.292187 | 5.4:-60196970 | None:intergenic |
| GGCCTCTGGGATAGAGCTTA+TGG | 0.292379 | 5.4:-60201264 | None:intergenic |
| GGTTCCTAGTTCATTATCTT+TGG | 0.293525 | 5.4:-60197045 | None:intergenic |
| ATTTGGGAACGATAATAAAA+TGG | 0.307334 | 5.4:+60200496 | MS.gene060257:CDS |
| TACTATGGTGGTCTGTCTTT+AGG | 0.311582 | 5.4:+60196978 | MS.gene060257:CDS |
| ATTACCTTTCTTGTGGTTGC+GGG | 0.313074 | 5.4:-60197319 | None:intergenic |
| AAGTTGTTGTACATGCTTCT+TGG | 0.319547 | 5.4:-60200828 | None:intergenic |
| AAGCTAGCTGCTCGGGCAGA+TGG | 0.322489 | 5.4:+60201287 | MS.gene060257:CDS |
| TATCCTTCGTGGATGTTTGC+AGG | 0.322641 | 5.4:+60202418 | MS.gene060257:CDS |
| GCTTATGAATACATTGAGTA+TGG | 0.325197 | 5.4:+60201887 | MS.gene060257:CDS |
| TATCTTACTTCAAATATGTT+TGG | 0.326206 | 5.4:-60200860 | None:intergenic |
| CAGCAGAGGAACGTTGTTAA+TGG | 0.326567 | 5.4:+60201368 | MS.gene060257:CDS |
| AAATTCAGTGGTTCTTCATA+TGG | 0.327593 | 5.4:+60196086 | MS.gene060257:CDS |
| ATGCCTCAAAATCTGGAATT+AGG | 0.329719 | 5.4:-60196785 | None:intergenic |
| AGCTAGCTGCTCGGGCAGAT+GGG | 0.331925 | 5.4:+60201288 | MS.gene060257:CDS |
| GGCTTTGGTTCAGCTGTTGT+TGG | 0.334446 | 5.4:+60195580 | MS.gene060257:CDS |
| ATAATTTGTTTCTTGGAAAC+AGG | 0.334894 | 5.4:+60201936 | MS.gene060257:CDS |
| TAATGAACTAGGAACCCTTT+TGG | 0.335766 | 5.4:+60197052 | MS.gene060257:CDS |
| TAAACAAACGCTCTGGTGAT+AGG | 0.336644 | 5.4:-60196731 | None:intergenic |
| ATATTCACTAGTTGTGGTTC+TGG | 0.339075 | 5.4:-60200920 | None:intergenic |
| GAAAACACGCTGTGAAAGTT+TGG | 0.339523 | 5.4:+60197090 | MS.gene060257:CDS |
| TGTTTCCTCGAGGCCTTTGA+TGG | 0.342680 | 5.4:-60196364 | None:intergenic |
| CCATCATCAACTTTAGAATC+TGG | 0.344135 | 5.4:+60200977 | MS.gene060257:CDS |
| GCAAAGTCCAAATTCTACTA+TGG | 0.357772 | 5.4:+60196963 | MS.gene060257:CDS |
| ATTACGATATTGAAGAGATT+GGG | 0.362996 | 5.4:+60196849 | MS.gene060257:CDS |
| CGAGCAGCTAGCTTGGCCTC+TGG | 0.368565 | 5.4:-60201278 | None:intergenic |
| GCCTAGAGCTTAGATTATTC+GGG | 0.370088 | 5.4:+60196469 | MS.gene060257:CDS |
| CTGTTCATGATAATGATCTA+AGG | 0.380437 | 5.4:+60201777 | MS.gene060257:CDS |
| CAGTTATTCTTTCTTGGAGC+AGG | 0.380945 | 5.4:+60195976 | MS.gene060257:CDS |
| AATTTCCATCTTGGAAGTTA+AGG | 0.381899 | 5.4:-60196068 | None:intergenic |
| TCTCTCCCGTACCACAATTT+GGG | 0.387444 | 5.4:+60200480 | MS.gene060257:CDS |
| TGGTTCAGCTGTTGTTGGAC+TGG | 0.393428 | 5.4:+60195585 | MS.gene060257:CDS |
| AATTACGATATTGAAGAGAT+TGG | 0.396230 | 5.4:+60196848 | MS.gene060257:CDS |
| CTCCAGGTAAACCCATCTTT+CGG | 0.403565 | 5.4:-60200521 | None:intergenic |
| GTGTGGAGATTTGTGGGCTT+TGG | 0.404921 | 5.4:+60195565 | MS.gene060257:CDS |
| GTCCTTCATGGAGATTTGTA+AGG | 0.405266 | 5.4:+60196659 | MS.gene060257:CDS |
| AATAAAATGGCACCGAAAGA+TGG | 0.407314 | 5.4:+60200509 | MS.gene060257:CDS |
| GCTAGCTGCTCGGGCAGATG+GGG | 0.408345 | 5.4:+60201289 | MS.gene060257:CDS |
| GGGTTTACCTGGAGAAAGTA+TGG | 0.409588 | 5.4:+60200530 | MS.gene060257:CDS |
| TTCAAATCTTATTCAAATGC+TGG | 0.421736 | 5.4:+60196254 | MS.gene060257:CDS |
| TCACAAAGTCGTCGCTCGCC+AGG | 0.421916 | 5.4:-60196600 | None:intergenic |
| AGAGGCCAAGCTAGCTGCTC+GGG | 0.422722 | 5.4:+60201280 | MS.gene060257:CDS |
| ATCTGCCCGAGCAGCTAGCT+TGG | 0.425005 | 5.4:-60201285 | None:intergenic |
| TTGCAGAAAACCCAACTGAT+TGG | 0.427057 | 5.4:+60197215 | MS.gene060257:CDS |
| TATTACCTTTCTTGTGGTTG+CGG | 0.428675 | 5.4:-60197320 | None:intergenic |
| TTCTTTGATAAGGTGGTGAA+TGG | 0.428734 | 5.4:+60195805 | MS.gene060257:intron |
| TAGCATCGATTCACAACAAT+TGG | 0.436800 | 5.4:+60196161 | MS.gene060257:CDS |
| CCAAAGGTGTGGAGATTTGT+GGG | 0.442550 | 5.4:+60195559 | MS.gene060257:CDS |
| GGATCCAATCATTTCCCAAA+AGG | 0.447536 | 5.4:-60197067 | None:intergenic |
| CCCACAAATCTCCACACCTT+TGG | 0.450968 | 5.4:-60195559 | None:intergenic |
| GTCGTCGCTCGCCAGGGAAA+AGG | 0.460574 | 5.4:-60196593 | None:intergenic |
| GAGCAGCTAGCTTGGCCTCT+GGG | 0.461901 | 5.4:-60201277 | None:intergenic |
| GTGGCTTTCAAGATATTGTT+CGG | 0.463435 | 5.4:+60202349 | MS.gene060257:CDS |
| TGTTGAAGAACACTCTCAAT+TGG | 0.466544 | 5.4:+60196296 | MS.gene060257:CDS |
| GGGTGCTGATTTATCCTTCG+TGG | 0.466850 | 5.4:+60202407 | MS.gene060257:CDS |
| CAGAGGCCAAGCTAGCTGCT+CGG | 0.472147 | 5.4:+60201279 | MS.gene060257:CDS |
| TATGGAATCTACCGTAGAAA+AGG | 0.472839 | 5.4:-60196031 | None:intergenic |
| GAACCACTGAATTTCCATCT+TGG | 0.473338 | 5.4:-60196077 | None:intergenic |
| CATCATCAACTTTAGAATCT+GGG | 0.473379 | 5.4:+60200978 | MS.gene060257:CDS |
| AACACCTTGCTGCCAGCGTA+TGG | 0.474940 | 5.4:+60201824 | MS.gene060257:CDS |
| CAAAGGTTATGTTGAGTGAT+GGG | 0.478213 | 5.4:+60196388 | MS.gene060257:CDS |
| TTTCTTGCCATACTTTCTCC+AGG | 0.479745 | 5.4:-60200537 | None:intergenic |
| CTAGCTGCTCGGGCAGATGG+GGG | 0.484526 | 5.4:+60201290 | MS.gene060257:CDS |
| GAATCTGGGTGGCTTTCAGC+AGG | 0.484545 | 5.4:+60200992 | MS.gene060257:CDS |
| ATGTACTTCACCAATCAGTT+GGG | 0.487599 | 5.4:-60197225 | None:intergenic |
| TCGTTCCCAAATTGTGGTAC+GGG | 0.490226 | 5.4:-60200485 | None:intergenic |
| CCAACGACATTGTCCATCAT+AGG | 0.492648 | 5.4:-60201320 | None:intergenic |
| TTTGTTTCAGGAGTTACTAC+AGG | 0.493714 | 5.4:+60200780 | MS.gene060257:intron |
| GCTTCCCTTGGCAACAGAAT+CGG | 0.495283 | 5.4:-60196709 | None:intergenic |
| AAGGTACTGATTATCTCCTA+TGG | 0.495832 | 5.4:-60196049 | None:intergenic |
| ATCGTTCCCAAATTGTGGTA+CGG | 0.496722 | 5.4:-60200486 | None:intergenic |
| CATGTACTTCACCAATCAGT+TGG | 0.498407 | 5.4:-60197226 | None:intergenic |
| CACCGAAAGATGGGTTTACC+TGG | 0.499782 | 5.4:+60200519 | MS.gene060257:CDS |
| CTTCTGAATTTGGATGATGA+TGG | 0.500009 | 5.4:-60195524 | None:intergenic |
| CCAGATTCTAAAGTTGATGA+TGG | 0.503403 | 5.4:-60200977 | None:intergenic |
| GTAGTATGATTGAAAAGCTC+GGG | 0.503496 | 5.4:+60196202 | MS.gene060257:CDS |
| GAAATGAGGCTATATGCATC+AGG | 0.506079 | 5.4:-60195832 | None:intergenic |
| TTTGAGATATTCACTAGTTG+TGG | 0.506163 | 5.4:-60200926 | None:intergenic |
| CTCTGGTGATAGGCTTCCCT+TGG | 0.507351 | 5.4:-60196721 | None:intergenic |
| TCGAAAACCATATTGAAAAG+TGG | 0.507977 | 5.4:+60196541 | MS.gene060257:CDS |
| GATCCAATCATTTCCCAAAA+GGG | 0.509437 | 5.4:-60197066 | None:intergenic |
| ATAAAATGGCACCGAAAGAT+GGG | 0.516299 | 5.4:+60200510 | MS.gene060257:CDS |
| CCAGCGTATGGAATCTTCAT+CGG | 0.519610 | 5.4:+60201836 | MS.gene060257:CDS |
| ATCCTTCGTGGATGTTTGCA+GGG | 0.520578 | 5.4:+60202419 | MS.gene060257:CDS |
| ACTGAAATATTATGTTCTAT+GGG | 0.521255 | 5.4:-60201680 | None:intergenic |
| TTATTATCGTTCCCAAATTG+TGG | 0.522799 | 5.4:-60200491 | None:intergenic |
| GCAAAGGTTATGTTGAGTGA+TGG | 0.523762 | 5.4:+60196387 | MS.gene060257:CDS |
| CAGCGTATGGAATCTTCATC+GGG | 0.526606 | 5.4:+60201837 | MS.gene060257:CDS |
| TAGCTGCTCGGGCAGATGGG+GGG | 0.526784 | 5.4:+60201291 | MS.gene060257:CDS |
| TTGTTTCTTGGAAACAGGAC+AGG | 0.528742 | 5.4:+60201941 | MS.gene060257:CDS |
| AAATCTAGAAATTGGACGAC+GGG | 0.530201 | 5.4:-60196684 | None:intergenic |
| CAACCCCGCAACCACAAGAA+AGG | 0.536838 | 5.4:+60197315 | MS.gene060257:CDS |
| CAGTACCTTAACTTCCAAGA+TGG | 0.536907 | 5.4:+60196063 | MS.gene060257:CDS |
| CATGAACAGACCATGTGCAC+TGG | 0.537808 | 5.4:-60201763 | None:intergenic |
| GAAGGATCGAAGGGGTATGA+AGG | 0.540378 | 5.4:+60197269 | MS.gene060257:CDS |
| GCCAAAGGTGTGGAGATTTG+TGG | 0.545731 | 5.4:+60195558 | MS.gene060257:CDS |
| TTGGTGATCAGTACTGATAT+TGG | 0.546097 | 5.4:+60196180 | MS.gene060257:CDS |
| TCCTTCATGGAGATTTGTAA+GGG | 0.548117 | 5.4:+60196660 | MS.gene060257:CDS |
| TTTACATATTACCTTTCTTG+TGG | 0.548511 | 5.4:-60197326 | None:intergenic |
| TGAAGTACATGAGGGATATG+TGG | 0.548848 | 5.4:+60197238 | MS.gene060257:CDS |
| GGTAGTATGATTGAAAAGCT+CGG | 0.550416 | 5.4:+60196201 | MS.gene060257:CDS |
| TGCAGAAACGGAAGGGACAA+TGG | 0.550989 | 5.4:+60201412 | MS.gene060257:CDS |
| AAATCTTATTCAAATGCTGG+TGG | 0.558758 | 5.4:+60196257 | MS.gene060257:CDS |
| TCTAAAGTTGATGATGGACT+AGG | 0.567065 | 5.4:-60200971 | None:intergenic |
| CTTCCAAGATGGAAATTCAG+TGG | 0.567592 | 5.4:+60196074 | MS.gene060257:CDS |
| GGAACTGTTAGAGAGCATAC+TGG | 0.570714 | 5.4:+60201433 | MS.gene060257:CDS |
| TTCTGAATTTGGATGATGAT+GGG | 0.571921 | 5.4:-60195523 | None:intergenic |
| TTACGATATTGAAGAGATTG+GGG | 0.573840 | 5.4:+60196850 | MS.gene060257:CDS |
| AATGAGGATTATGGACACAT+TGG | 0.574240 | 5.4:+60196926 | MS.gene060257:CDS |
| TGGCTTGACACGCTTTCATG+TGG | 0.578051 | 5.4:-60200808 | None:intergenic |
| CAAAGGCAACACATGAAATG+AGG | 0.579964 | 5.4:-60195846 | None:intergenic |
| CACAAAGTCGTCGCTCGCCA+GGG | 0.581520 | 5.4:-60196599 | None:intergenic |
| CATTCATAGTATGCCATGGA+AGG | 0.582799 | 5.4:+60196515 | MS.gene060257:CDS |
| TATGGCAAGAAAGATATACT+TGG | 0.584750 | 5.4:+60200548 | MS.gene060257:CDS |
| AAGAAGCATGTACAACAACT+TGG | 0.584808 | 5.4:+60200830 | MS.gene060257:CDS |
| TTACCTTTCTTGTGGTTGCG+GGG | 0.586146 | 5.4:-60197318 | None:intergenic |
| GACCGACTCTAACTTCATGA+TGG | 0.587398 | 5.4:+60196323 | MS.gene060257:CDS |
| TCCCTTACAAATCTCCATGA+AGG | 0.589286 | 5.4:-60196661 | None:intergenic |
| TTGCAACTACTAGCGATAGC+GGG | 0.589997 | 5.4:+60196136 | MS.gene060257:CDS |
| ATGACCAAAGATAATGAACT+AGG | 0.592112 | 5.4:+60197041 | MS.gene060257:CDS |
| GGAAGGTTCTGAAGGATCGA+AGG | 0.592227 | 5.4:+60197259 | MS.gene060257:CDS |
| GGATATGTGGAAGGTTCTGA+AGG | 0.592286 | 5.4:+60197251 | MS.gene060257:CDS |
| CCTATGATGGACAATGTCGT+TGG | 0.593150 | 5.4:+60201320 | MS.gene060257:CDS |
| TTCCGGTCCAAAAGTTATGG+TGG | 0.596001 | 5.4:+60197176 | MS.gene060257:CDS |
| ACCCGAATAATCTAAGCTCT+AGG | 0.597703 | 5.4:-60196470 | None:intergenic |
| GAAGGTTCTGAAGGATCGAA+GGG | 0.598105 | 5.4:+60197260 | MS.gene060257:CDS |
| TGAAGAACACTCTCAATTGG+TGG | 0.599030 | 5.4:+60196299 | MS.gene060257:CDS |
| TCATCATCCAAATTCAGAAG+TGG | 0.599682 | 5.4:+60195527 | MS.gene060257:CDS |
| AAGTGTACAATAATTGCCGT+AGG | 0.601558 | 5.4:+60196430 | MS.gene060257:CDS |
| GTTGAGTGATGGGTTTGAGA+AGG | 0.601587 | 5.4:+60196398 | MS.gene060257:CDS |
| AGGACATTCATAGTATGCCA+TGG | 0.602167 | 5.4:+60196511 | MS.gene060257:CDS |
| AAGTCCAAATTCTACTATGG+TGG | 0.607924 | 5.4:+60196966 | MS.gene060257:CDS |
| AGGAACGTTGTTAATGGAGA+CGG | 0.608385 | 5.4:+60201374 | MS.gene060257:CDS |
| TGATGATGGACTAGGCATGA+TGG | 0.609738 | 5.4:-60200963 | None:intergenic |
| TCATCGCATTAAGATTCCAC+CGG | 0.613032 | 5.4:+60202475 | MS.gene060257:CDS |
| GATTCCATACGCTGGCAGCA+AGG | 0.613878 | 5.4:-60201828 | None:intergenic |
| TGTTTGAGAATTCCTCAATG+AGG | 0.616487 | 5.4:+60196910 | MS.gene060257:CDS |
| GTACATGAGGGATATGTGGA+AGG | 0.616984 | 5.4:+60197242 | MS.gene060257:CDS |
| ATTGCAACTACTAGCGATAG+CGG | 0.617796 | 5.4:+60196135 | MS.gene060257:CDS |
| GGCTGATGCAGCCAAAGGTG+TGG | 0.618428 | 5.4:+60195548 | MS.gene060257:CDS |
| ACTCTAAACAATCGCTCCGG+TGG | 0.619561 | 5.4:-60202491 | None:intergenic |
| AGGACTCTAAACAATCGCTC+CGG | 0.620124 | 5.4:-60202494 | None:intergenic |
| GAATTTCAGCAGCTGAAGTG+TGG | 0.621158 | 5.4:-60202445 | None:intergenic |
| CTGAAGCCAGAAACCATCAA+AGG | 0.622060 | 5.4:+60196351 | MS.gene060257:CDS |
| GCGTTTGTTTAAAATGCTCG+AGG | 0.622531 | 5.4:+60196743 | MS.gene060257:CDS |
| GAAGTGGCTGATGCAGCCAA+AGG | 0.626358 | 5.4:+60195543 | MS.gene060257:CDS |
| ACTGATTGGTGAAGTACATG+AGG | 0.629994 | 5.4:+60197229 | MS.gene060257:CDS |
| ACAACTAGTGAATATCTCAA+AGG | 0.632999 | 5.4:+60200928 | MS.gene060257:CDS |
| TCATGTCACTTAGCTTGTCG+AGG | 0.634154 | 5.4:+60195872 | MS.gene060257:CDS |
| TATGCAGAATCCAGTGCACA+TGG | 0.634816 | 5.4:+60201753 | MS.gene060257:CDS |
| TTGTCGAGGCAAACTGAGTG+CGG | 0.638955 | 5.4:+60195886 | MS.gene060257:CDS |
| ATCCATCATGAAGTTAGAGT+CGG | 0.639651 | 5.4:-60196325 | None:intergenic |
| AGTGTACAATAATTGCCGTA+GGG | 0.640741 | 5.4:+60196431 | MS.gene060257:CDS |
| CTGATTGGTGAAGTACATGA+GGG | 0.641699 | 5.4:+60197230 | MS.gene060257:CDS |
| TTTGCCGATTCTGTTGCCAA+GGG | 0.645309 | 5.4:+60196705 | MS.gene060257:CDS |
| GTGGATTAAGGCTTCAAACG+TGG | 0.648426 | 5.4:+60202330 | MS.gene060257:intron |
| GCTAAGTGACATGATAGCAA+AGG | 0.648962 | 5.4:-60195863 | None:intergenic |
| AGGCCTCGAGGAAACAGCAA+AGG | 0.649096 | 5.4:+60196371 | MS.gene060257:CDS |
| CCGATGAAGATTCCATACGC+TGG | 0.650099 | 5.4:-60201836 | None:intergenic |
| ATATTTGAAGTAAGATACAA+TGG | 0.650994 | 5.4:+60200866 | MS.gene060257:CDS |
| GTGAAAGTTTGGAACTACAG+TGG | 0.652878 | 5.4:+60197101 | MS.gene060257:CDS |
| AAAATCCTGCACTAAAGTGG+GGG | 0.654809 | 5.4:-60197153 | None:intergenic |
| TGTGTCCATAATCCTCATTG+AGG | 0.658715 | 5.4:-60196922 | None:intergenic |
| TAACCTTTGCTGTTTCCTCG+AGG | 0.661444 | 5.4:-60196374 | None:intergenic |
| AAAGCTCGGGACTTATGTGA+AGG | 0.663558 | 5.4:+60196215 | MS.gene060257:CDS |
| GAAGGATAAATCAGCACCCG+AGG | 0.670071 | 5.4:-60202403 | None:intergenic |
| CTGCTATAAGATCACAGCAG+AGG | 0.672431 | 5.4:+60201354 | MS.gene060257:CDS |
| ACTCGTTCAAGCAATCCCTA+CGG | 0.679495 | 5.4:-60196446 | None:intergenic |
| TACGATATTGAAGAGATTGG+GGG | 0.680763 | 5.4:+60196851 | MS.gene060257:CDS |
| AAAATCTAGAAATTGGACGA+CGG | 0.683516 | 5.4:-60196685 | None:intergenic |
| TTCCCTGCAAACATCCACGA+AGG | 0.687791 | 5.4:-60202421 | None:intergenic |
| CATCAACTTTAGAATCTGGG+TGG | 0.691768 | 5.4:+60200981 | MS.gene060257:CDS |
| TTTGAAGTAAGATACAATGG+TGG | 0.696071 | 5.4:+60200869 | MS.gene060257:CDS |
| TACTTGGCTTCAAATACCCG+AGG | 0.697044 | 5.4:+60200564 | MS.gene060257:CDS |
| ATCCATAAGCTCTATCCCAG+AGG | 0.724834 | 5.4:+60201262 | MS.gene060257:CDS |
| GTTGCAAAAGCTCAACATCG+AGG | 0.726407 | 5.4:+60196491 | MS.gene060257:CDS |
| AGAAACCATCAAAGGCCTCG+AGG | 0.730932 | 5.4:+60196359 | MS.gene060257:CDS |
| AAGGTTCTGAAGGATCGAAG+GGG | 0.751696 | 5.4:+60197261 | MS.gene060257:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 60195517 | 60202545 | 60195517 | ID=MS.gene060257 |
| chr5.4 | mRNA | 60195517 | 60202545 | 60195517 | ID=MS.gene060257.t1;Parent=MS.gene060257 |
| chr5.4 | exon | 60195517 | 60195606 | 60195517 | ID=MS.gene060257.t1.exon1;Parent=MS.gene060257.t1 |
| chr5.4 | CDS | 60195517 | 60195606 | 60195517 | ID=cds.MS.gene060257.t1;Parent=MS.gene060257.t1 |
| chr5.4 | exon | 60195817 | 60197336 | 60195817 | ID=MS.gene060257.t1.exon2;Parent=MS.gene060257.t1 |
| chr5.4 | CDS | 60195817 | 60197336 | 60195817 | ID=cds.MS.gene060257.t1;Parent=MS.gene060257.t1 |
| chr5.4 | exon | 60200442 | 60200585 | 60200442 | ID=MS.gene060257.t1.exon3;Parent=MS.gene060257.t1 |
| chr5.4 | CDS | 60200442 | 60200585 | 60200442 | ID=cds.MS.gene060257.t1;Parent=MS.gene060257.t1 |
| chr5.4 | exon | 60200790 | 60201025 | 60200790 | ID=MS.gene060257.t1.exon4;Parent=MS.gene060257.t1 |
| chr5.4 | CDS | 60200790 | 60201025 | 60200790 | ID=cds.MS.gene060257.t1;Parent=MS.gene060257.t1 |
| chr5.4 | exon | 60201258 | 60201962 | 60201258 | ID=MS.gene060257.t1.exon5;Parent=MS.gene060257.t1 |
| chr5.4 | CDS | 60201258 | 60201962 | 60201258 | ID=cds.MS.gene060257.t1;Parent=MS.gene060257.t1 |
| chr5.4 | exon | 60202340 | 60202545 | 60202340 | ID=MS.gene060257.t1.exon6;Parent=MS.gene060257.t1 |
| chr5.4 | CDS | 60202340 | 60202545 | 60202340 | ID=cds.MS.gene060257.t1;Parent=MS.gene060257.t1 |
| Gene Sequence |
| Protein sequence |
