Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55708.t1 | XP_024627888.1 | 96.3 | 382 | 14 | 0 | 1 | 382 | 69 | 450 | 1.20E-207 | 732.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55708.t1 | Q08448 | 27.0 | 237 | 133 | 8 | 22 | 251 | 6 | 209 | 5.3e-15 | 83.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55708.t1 | G7LIR3 | 96.1 | 383 | 14 | 1 | 1 | 382 | 69 | 451 | 2.1e-206 | 727.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene55708 | 0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene55708 | 0.830409 | 2.98E-55 | -1.69E-46 |
| MS.gene050553 | MS.gene55708 | 0.818123 | 2.31E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene55708 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene55708 | 0.825641 | 4.20E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene55708 | 0.805023 | 1.63E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene55708 | 0.802458 | 5.56E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene55708 | 0.806508 | 7.95E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene55708 | 0.812637 | 3.83E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene55708 | 0.815961 | 7.07E-52 | -1.69E-46 |
| MS.gene053097 | MS.gene55708 | -0.808657 | 2.78E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene55708 | 0.824027 | 1.01E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene55708 | 0.817993 | 2.47E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene55708 | 0.812089 | 5.05E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene55708 | 0.8235 | 1.34E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene55708 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene056266 | MS.gene55708 | 0.807784 | 4.27E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene55708 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene55708 | 0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene55708 | 0.823684 | 1.21E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene55708 | -0.803914 | 2.78E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene55708 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene55708 | 0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene55708 | 0.807083 | 6.01E-50 | -1.69E-46 |
| MS.gene06027 | MS.gene55708 | 0.846444 | 2.16E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55708.t1 | MTR_8g086260 | 96.084 | 383 | 14 | 1 | 1 | 382 | 69 | 451 | 0.0 | 758 |
| MS.gene55708.t1 | MTR_8g086260 | 95.714 | 350 | 14 | 1 | 1 | 349 | 69 | 418 | 0.0 | 691 |
| MS.gene55708.t1 | MTR_8g086260 | 94.062 | 320 | 18 | 1 | 1 | 319 | 69 | 388 | 0.0 | 616 |
| MS.gene55708.t1 | MTR_2g015960 | 76.178 | 382 | 86 | 3 | 1 | 381 | 62 | 439 | 0.0 | 578 |
| MS.gene55708.t1 | MTR_8g086260 | 97.683 | 259 | 6 | 0 | 1 | 259 | 69 | 327 | 0.0 | 521 |
| MS.gene55708.t1 | MTR_8g086260 | 96.311 | 244 | 9 | 0 | 1 | 244 | 69 | 312 | 4.55e-173 | 485 |
| MS.gene55708.t1 | MTR_8g086260 | 96.311 | 244 | 9 | 0 | 1 | 244 | 69 | 312 | 3.52e-172 | 483 |
| MS.gene55708.t1 | MTR_2g015960 | 77.481 | 262 | 57 | 2 | 1 | 261 | 1 | 261 | 1.38e-145 | 413 |
| MS.gene55708.t1 | MTR_2g015960 | 77.481 | 262 | 57 | 2 | 1 | 261 | 62 | 322 | 8.58e-145 | 414 |
| MS.gene55708.t1 | MTR_4g128800 | 44.134 | 358 | 172 | 5 | 20 | 369 | 29 | 366 | 4.85e-96 | 291 |
| MS.gene55708.t1 | MTR_3g110530 | 42.978 | 356 | 188 | 6 | 17 | 370 | 56 | 398 | 8.44e-94 | 286 |
| MS.gene55708.t1 | MTR_1g040460 | 42.939 | 347 | 172 | 4 | 21 | 367 | 30 | 350 | 2.45e-91 | 278 |
| MS.gene55708.t1 | MTR_4g128800 | 44.543 | 339 | 160 | 5 | 20 | 350 | 29 | 347 | 2.17e-89 | 275 |
| MS.gene55708.t1 | MTR_4g128800 | 50.202 | 247 | 113 | 2 | 20 | 259 | 29 | 272 | 4.81e-80 | 247 |
| MS.gene55708.t1 | MTR_7g405800 | 51.765 | 85 | 40 | 1 | 89 | 172 | 143 | 227 | 3.09e-18 | 83.2 |
| MS.gene55708.t1 | MTR_6g005650 | 51.765 | 85 | 40 | 1 | 89 | 172 | 210 | 294 | 1.36e-17 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55708.t1 | AT1G29120 | 71.094 | 384 | 102 | 3 | 1 | 382 | 79 | 455 | 0.0 | 539 |
| MS.gene55708.t1 | AT1G29120 | 71.094 | 384 | 102 | 3 | 1 | 382 | 79 | 455 | 0.0 | 539 |
| MS.gene55708.t1 | AT1G29120 | 71.094 | 384 | 102 | 3 | 1 | 382 | 80 | 456 | 0.0 | 539 |
| MS.gene55708.t1 | AT1G29120 | 70.649 | 385 | 103 | 4 | 1 | 382 | 79 | 456 | 0.0 | 531 |
| MS.gene55708.t1 | AT1G29120 | 71.148 | 357 | 94 | 3 | 1 | 355 | 79 | 428 | 2.20e-176 | 498 |
| MS.gene55708.t1 | AT1G29120 | 70.978 | 317 | 83 | 3 | 1 | 315 | 79 | 388 | 1.52e-150 | 431 |
| MS.gene55708.t1 | AT1G29120 | 70.978 | 317 | 83 | 3 | 1 | 315 | 79 | 388 | 2.08e-150 | 431 |
| MS.gene55708.t1 | AT1G29120 | 70.325 | 246 | 64 | 3 | 1 | 244 | 79 | 317 | 1.04e-114 | 337 |
| MS.gene55708.t1 | AT4G25770 | 47.875 | 353 | 158 | 5 | 16 | 367 | 87 | 414 | 1.95e-102 | 309 |
| MS.gene55708.t1 | AT4G25770 | 48.204 | 334 | 147 | 5 | 16 | 348 | 87 | 395 | 1.28e-95 | 292 |
| MS.gene55708.t1 | AT5G51180 | 42.297 | 357 | 179 | 4 | 11 | 367 | 24 | 353 | 1.15e-90 | 277 |
| MS.gene55708.t1 | AT5G51180 | 42.297 | 357 | 179 | 4 | 11 | 367 | 24 | 353 | 1.15e-90 | 277 |
| MS.gene55708.t1 | AT1G10040 | 42.618 | 359 | 176 | 7 | 17 | 369 | 76 | 410 | 1.57e-90 | 278 |
| MS.gene55708.t1 | AT1G10040 | 42.899 | 338 | 163 | 7 | 17 | 348 | 76 | 389 | 2.74e-84 | 262 |
Find 0 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATACTAAAAATTTAC+TGG | - | 57371:2727-2746 | MS.gene55708:intron | 10.0% |
| !! | TAACAAAATTTAAATTATAC+TGG | - | 57371:2628-2647 | MS.gene55708:CDS | 10.0% |
| !! | TTACAACTAAAATTTATATA+TGG | + | 57371:2311-2330 | MS.gene55708:intergenic | 10.0% |
| !!! | AGTATAATTTAAATTTTGTT+AGG | + | 57371:2629-2648 | MS.gene55708:intergenic | 10.0% |
| !!! | AGTGATTTTTTTTTTTTTTT+TGG | - | 57371:1402-1421 | MS.gene55708:intron | 10.0% |
| !!! | GTATAATTTAAATTTTGTTA+GGG | + | 57371:2628-2647 | MS.gene55708:intergenic | 10.0% |
| !!! | GTTTATTTAACTAATTTTAA+AGG | + | 57371:4284-4303 | MS.gene55708:intergenic | 10.0% |
| !!! | TCATTTTATAAAAGTAATAT+AGG | - | 57371:721-740 | MS.gene55708:intron | 10.0% |
| !! | AAAAAAAAAATGATACTGTT+AGG | - | 57371:3369-3388 | MS.gene55708:CDS | 15.0% |
| !! | AAAAAAAAATGATACTGTTA+GGG | - | 57371:3370-3389 | MS.gene55708:CDS | 15.0% |
| !! | ATTGAAATTTCTCTAATTAT+TGG | + | 57371:2579-2598 | MS.gene55708:intergenic | 15.0% |
| !! | TGAAATTAAAGACAAAAAAA+TGG | + | 57371:1516-1535 | MS.gene55708:intergenic | 15.0% |
| !! | TGAATTTCAATATGTAATTA+CGG | + | 57371:4107-4126 | MS.gene55708:intergenic | 15.0% |
| !! | TTAGTTAAATAAACAAATGA+TGG | - | 57371:4290-4309 | MS.gene55708:intron | 15.0% |
| !!! | ATTGTTATTTTAAATAGCTT+AGG | + | 57371:1688-1707 | MS.gene55708:intergenic | 15.0% |
| !! | AAATGTACTAACCATAAATT+AGG | + | 57371:1338-1357 | MS.gene55708:intergenic | 20.0% |
| !! | ATCATAGAGAAATTATATAG+TGG | + | 57371:3645-3664 | MS.gene55708:intergenic | 20.0% |
| !! | ATCTTACATATGTTAAATAC+TGG | + | 57371:3300-3319 | MS.gene55708:intergenic | 20.0% |
| !! | ATTATTGAATTATGAGATAG+TGG | + | 57371:1151-1170 | MS.gene55708:intergenic | 20.0% |
| !! | GCTAAAGTAATAAAATTGAT+TGG | + | 57371:2212-2231 | MS.gene55708:intergenic | 20.0% |
| !! | TAAAGAAATTACCAAAATTG+AGG | + | 57371:3161-3180 | MS.gene55708:intergenic | 20.0% |
| !! | TAAAGGATTAATTGAAAAAG+AGG | + | 57371:2985-3004 | MS.gene55708:intergenic | 20.0% |
| !! | TAACAAACAGAAAAAGAAAT+AGG | + | 57371:1183-1202 | MS.gene55708:intergenic | 20.0% |
| !! | TAATTAGAGAAATTTCAATC+AGG | - | 57371:2580-2599 | MS.gene55708:CDS | 20.0% |
| !! | TTTATGATTGACAAATAAAC+TGG | + | 57371:695-714 | MS.gene55708:intergenic | 20.0% |
| !!! | AACTAATTTTAAAGGTTTTC+TGG | + | 57371:4276-4295 | MS.gene55708:intergenic | 20.0% |
| !!! | AATGTTTTGGAATTTTTCTT+TGG | - | 57371:1717-1736 | MS.gene55708:intron | 20.0% |
| !!! | TCTTTAACTTGATATAGATA+TGG | - | 57371:3175-3194 | MS.gene55708:intron | 20.0% |
| !!! | TTATTTCCTTTTATCAAAAC+AGG | - | 57371:1977-1996 | MS.gene55708:intron | 20.0% |
| !!! | TTTTTTTTTTTGGTAAAGCA+TGG | - | 57371:1412-1431 | MS.gene55708:intron | 20.0% |
| ! | AAAAGAAAAATGTAGTTGCA+AGG | + | 57371:3872-3891 | MS.gene55708:intergenic | 25.0% |
| ! | AAAAGAATCAGAACTGAAAT+TGG | + | 57371:1925-1944 | MS.gene55708:intergenic | 25.0% |
| ! | AAAGAATCAGAACTGAAATT+GGG | + | 57371:1924-1943 | MS.gene55708:intergenic | 25.0% |
| ! | AAATGTAAAGTGAGGAAATA+TGG | + | 57371:3901-3920 | MS.gene55708:intergenic | 25.0% |
| ! | AACTTGATATAGATATGGTT+GGG | - | 57371:3180-3199 | MS.gene55708:intron | 25.0% |
| ! | AATGATTGACATCTATTCAA+TGG | + | 57371:3523-3542 | MS.gene55708:intergenic | 25.0% |
| ! | AGAATGCTTATATGTTACTA+GGG | - | 57371:4529-4548 | MS.gene55708:intron | 25.0% |
| ! | AGATTTGTGTGTTAAATGTT+TGG | - | 57371:1895-1914 | MS.gene55708:intron | 25.0% |
| ! | AGTTTAACTGAAAAGAGTAA+TGG | - | 57371:635-654 | MS.gene55708:CDS | 25.0% |
| ! | ATATATGGCAAAAAAACCAT+AGG | + | 57371:2296-2315 | MS.gene55708:intergenic | 25.0% |
| ! | ATTGACAAATAAACTGGAAA+GGG | + | 57371:689-708 | MS.gene55708:intergenic | 25.0% |
| ! | ATTTCAATATGTAATTACGG+AGG | + | 57371:4104-4123 | MS.gene55708:intergenic | 25.0% |
| ! | GAAATAAATGTATGTACGTA+TGG | + | 57371:804-823 | MS.gene55708:intergenic | 25.0% |
| ! | GATCCTCGTAATTTATAATT+AGG | - | 57371:3763-3782 | MS.gene55708:intron | 25.0% |
| ! | GCGAAACTATTATATAGAAA+TGG | - | 57371:4483-4502 | MS.gene55708:intron | 25.0% |
| ! | TAACTTGATATAGATATGGT+TGG | - | 57371:3179-3198 | MS.gene55708:intron | 25.0% |
| ! | TATAGGTATCATGTGAATAA+AGG | + | 57371:2097-2116 | MS.gene55708:intergenic | 25.0% |
| ! | TATCAAGAAGGGTTAATAAT+TGG | - | 57371:4035-4054 | MS.gene55708:intron | 25.0% |
| ! | TGAACGTAAAATTAATTGTC+TGG | - | 57371:1762-1781 | MS.gene55708:intron | 25.0% |
| ! | TGACCTAATTATAAATTACG+AGG | + | 57371:3769-3788 | MS.gene55708:intergenic | 25.0% |
| ! | TGATAATATTCAAACTGTCT+TGG | - | 57371:2367-2386 | MS.gene55708:intron | 25.0% |
| ! | TGATACTGTTTATGAATAGT+TGG | - | 57371:661-680 | MS.gene55708:CDS | 25.0% |
| ! | TGGATCAAATCAATTAATAC+TGG | - | 57371:4310-4329 | MS.gene55708:intron | 25.0% |
| ! | TGTACATCTGTAACATTTAA+TGG | - | 57371:1472-1491 | MS.gene55708:intron | 25.0% |
| ! | TTCACATGATACCTATAATA+AGG | - | 57371:2100-2119 | MS.gene55708:intron | 25.0% |
| ! | TTTCAATATGTAATTACGGA+GGG | + | 57371:4103-4122 | MS.gene55708:intergenic | 25.0% |
| !! | AATTTCAGGTGAAAAATGAA+TGG | - | 57371:5012-5031 | MS.gene55708:intron | 25.0% |
| !! | CAATAGTTGTCTTAATGTTT+TGG | - | 57371:1704-1723 | MS.gene55708:intron | 25.0% |
| !! | GTATGCATAAAAACTTTTAC+TGG | - | 57371:588-607 | MS.gene55708:intron | 25.0% |
| !! | TAATTTTACGTTCATTGAAG+AGG | + | 57371:1756-1775 | MS.gene55708:intergenic | 25.0% |
| !!! | ATGAAGATTTGTTAAGTGTT+GGG | - | 57371:4405-4424 | MS.gene55708:intron | 25.0% |
| !!! | ATTTATTTCTGTTGGTCATT+TGG | - | 57371:815-834 | MS.gene55708:CDS | 25.0% |
| !!! | GTACATACATTTATTTCTGT+TGG | - | 57371:807-826 | MS.gene55708:CDS | 25.0% |
| !!! | TTGTAAATGAGTGTTGTTTA+TGG | - | 57371:2325-2344 | MS.gene55708:intron | 25.0% |
| !!! | TTTTTCTGGTAGTTATGATT+TGG | - | 57371:1550-1569 | MS.gene55708:intron | 25.0% |
| AAATTAGGAAGTTCTTTCCA+AGG | + | 57371:1323-1342 | MS.gene55707:intergenic | 30.0% | |
| AAATTGTTGTGCTGAATTGT+GGG | - | 57371:543-562 | MS.gene55708:intron | 30.0% | |
| AACAAAGAAAACATACTGAG+AGG | + | 57371:3093-3112 | MS.gene55708:intergenic | 30.0% | |
| AAGAGAATGAAAGTTATCCA+TGG | + | 57371:3973-3992 | MS.gene55708:intergenic | 30.0% | |
| AAGTGTGAAAAGTCAAACTT+TGG | - | 57371:763-782 | MS.gene55708:intron | 30.0% | |
| AATATGAAGAGTTTCAACGA+AGG | + | 57371:2703-2722 | MS.gene55708:intergenic | 30.0% | |
| AATATGATGATTTCTCCCTT+TGG | - | 57371:3248-3267 | MS.gene55708:intron | 30.0% | |
| AATTGCAATACTAGTGTTCT+CGG | - | 57371:4244-4263 | MS.gene55708:intron | 30.0% | |
| ACAAGAAACATCGTCAATAT+TGG | - | 57371:5088-5107 | MS.gene55708:CDS | 30.0% | |
| ACACTAGATCTTGTAAGTAA+AGG | + | 57371:3002-3021 | MS.gene55708:intergenic | 30.0% | |
| ACATCTGTAACATTTAATGG+AGG | - | 57371:1475-1494 | MS.gene55708:intron | 30.0% | |
| ACCATAGGCACATATTTATA+TGG | + | 57371:2281-2300 | MS.gene55708:intergenic | 30.0% | |
| ACCATATAAATATGTGCCTA+TGG | - | 57371:2277-2296 | MS.gene55708:intron | 30.0% | |
| ACTATGTATCTTCTTAACAG+AGG | - | 57371:4822-4841 | MS.gene55708:intron | 30.0% | |
| AGAAATAGAGTTTCCATTAG+TGG | + | 57371:419-438 | MS.gene55708:intergenic | 30.0% | |
| AGTGTGAAAAGTCAAACTTT+GGG | - | 57371:764-783 | MS.gene55708:intron | 30.0% | |
| ATATGATGATTTCTCCCTTT+GGG | - | 57371:3249-3268 | MS.gene55708:intron | 30.0% | |
| ATGTTGTTATGAGCAAAGAA+AGG | + | 57371:4916-4935 | MS.gene55708:intergenic | 30.0% | |
| ATTCAAGGATTACAACAGTT+GGG | - | 57371:4850-4869 | MS.gene55708:intron | 30.0% | |
| CTTACATAATACTGCCAATA+TGG | - | 57371:2420-2439 | MS.gene55708:intron | 30.0% | |
| CTTATACTAAGACGTTTACT+GGG | - | 57371:1821-1840 | MS.gene55708:intron | 30.0% | |
| GAAATGGAAGATGTTTGAAA+TGG | - | 57371:4499-4518 | MS.gene55708:intron | 30.0% | |
| GAAGATTCCATACGAAAATT+TGG | - | 57371:4458-4477 | MS.gene55708:intron | 30.0% | |
| GAATATCATGAAATTGTCGA+AGG | - | 57371:4726-4745 | MS.gene55708:intron | 30.0% | |
| GAGAATGCTTATATGTTACT+AGG | - | 57371:4528-4547 | MS.gene55708:intron | 30.0% | |
| GATTGACAAATAAACTGGAA+AGG | + | 57371:690-709 | MS.gene55708:intergenic | 30.0% | |
| GGAAAAGAAGTTAAAGACAA+AGG | + | 57371:1616-1635 | MS.gene55708:intergenic | 30.0% | |
| GGAAAGAACTTCCTAATTTA+TGG | - | 57371:1324-1343 | MS.gene55708:intron | 30.0% | |
| TATTAACCCTTCTTGATAGA+AGG | + | 57371:4033-4052 | MS.gene55708:intergenic | 30.0% | |
| TCTGTTAAGAAGATACATAG+TGG | + | 57371:4823-4842 | MS.gene55708:intergenic | 30.0% | |
| TGGAAAATTTCTGTAAGCAA+AGG | - | 57371:2941-2960 | MS.gene55708:intron | 30.0% | |
| TGGAACAAAAATATTGTCAG+TGG | - | 57371:4330-4349 | MS.gene55708:intron | 30.0% | |
| TTGTTCTGTAGTTTAGTGAT+AGG | - | 57371:841-860 | MS.gene55708:CDS | 30.0% | |
| TTTCGAAAAGCTTGTACTTT+GGG | + | 57371:2165-2184 | MS.gene55708:intergenic | 30.0% | |
| TTTGGTAAAGCATGGATATA+AGG | - | 57371:1420-1439 | MS.gene55708:intron | 30.0% | |
| ! | AAAGGTCTATTTGTGTTGTT+TGG | - | 57371:1651-1670 | MS.gene55708:intron | 30.0% |
| ! | ATGATATTCCACAGTTTTCT+GGG | + | 57371:4715-4734 | MS.gene55708:intergenic | 30.0% |
| ! | GGTGTATCAATGATAACTTT+TGG | - | 57371:3126-3145 | MS.gene55708:intron | 30.0% |
| ! | TATGTAACTAGCACTAGTTT+AGG | + | 57371:3482-3501 | MS.gene55708:intergenic | 30.0% |
| ! | TGGTTCTATAATGTTGTACT+GGG | - | 57371:3691-3710 | MS.gene55708:CDS | 30.0% |
| !! | AAAGGCATAATTTTGAGCTA+TGG | + | 57371:3841-3860 | MS.gene55708:intergenic | 30.0% |
| !! | ATCAACATCATTTTCAAGAC+TGG | + | 57371:2666-2685 | MS.gene55708:intergenic | 30.0% |
| !! | ATTTTGTTAGGGTTTGTTTG+TGG | + | 57371:2617-2636 | MS.gene55708:intergenic | 30.0% |
| !! | GTCAGTAATTCAACTTTTTC+TGG | - | 57371:1536-1555 | MS.gene55708:intron | 30.0% |
| !! | TAAATGAGTGTTGTTTATGG+TGG | - | 57371:2328-2347 | MS.gene55708:intron | 30.0% |
| !! | TTGGTTCTATAATGTTGTAC+TGG | - | 57371:3690-3709 | MS.gene55708:CDS | 30.0% |
| !!! | GCAATACCTGTTTTGATAAA+AGG | + | 57371:1986-2005 | MS.gene55708:intergenic | 30.0% |
| AAATAAGCCTCCTAAAGAGT+GGG | + | 57371:2054-2073 | MS.gene55707:intergenic | 35.0% | |
| AACATAACATAGAGAACCAC+AGG | + | 57371:1365-1384 | MS.gene55708:intergenic | 35.0% | |
| AATGAATGGTTTCACAATGC+TGG | - | 57371:5026-5045 | MS.gene55708:intron | 35.0% | |
| ACCAATTGCGGATCTATTAT+AGG | - | 57371:2443-2462 | MS.gene55708:intron | 35.0% | |
| ACTATGTTAACCCAGTTCAT+TGG | - | 57371:4059-4078 | MS.gene55708:intron | 35.0% | |
| ACTTTACATTTAGTACCCTG+AGG | - | 57371:3910-3929 | MS.gene55708:intron | 35.0% | |
| AGAATGAAAGTTATCCATGG+AGG | + | 57371:3970-3989 | MS.gene55708:intergenic | 35.0% | |
| AGCATGGATATAAGGTAACA+CGG | - | 57371:1428-1447 | MS.gene55708:intron | 35.0% | |
| AGGAAAAAGAAGTAAGCAAG+TGG | - | 57371:945-964 | MS.gene55708:intron | 35.0% | |
| ATTTCTCTATGATGAAGTGC+TGG | - | 57371:3652-3671 | MS.gene55708:intron | 35.0% | |
| CAAATTGTTGTGCTGAATTG+TGG | - | 57371:542-561 | MS.gene55708:intron | 35.0% | |
| CACAAGAACTTCTCAATTTC+AGG | - | 57371:4998-5017 | MS.gene55708:intron | 35.0% | |
| CATCATCTGAGAGATCAATA+AGG | + | 57371:4954-4973 | MS.gene55708:intergenic | 35.0% | |
| CTAATGAACTTCTTGTCACA+TGG | - | 57371:2508-2527 | MS.gene55708:intron | 35.0% | |
| CTTTCGAAAAGCTTGTACTT+TGG | + | 57371:2166-2185 | MS.gene55708:intergenic | 35.0% | |
| GAAAAAGAAGTAAGCAAGTG+GGG | - | 57371:947-966 | MS.gene55708:intron | 35.0% | |
| GATTCAAGGATTACAACAGT+TGG | - | 57371:4849-4868 | MS.gene55708:intron | 35.0% | |
| GATTCCATACGAAAATTTGG+AGG | - | 57371:4461-4480 | MS.gene55708:intron | 35.0% | |
| GCTTATACTAAGACGTTTAC+TGG | - | 57371:1820-1839 | MS.gene55708:intron | 35.0% | |
| GGAAAAAGAAGTAAGCAAGT+GGG | - | 57371:946-965 | MS.gene55708:intron | 35.0% | |
| GTGTGAAAAGTCAAACTTTG+GGG | - | 57371:765-784 | MS.gene55708:intron | 35.0% | |
| TATGGAATCTTCCTTGAACA+CGG | + | 57371:4450-4469 | MS.gene55708:intergenic | 35.0% | |
| TCCTGAGGTAATGCATTAAA+AGG | - | 57371:1633-1652 | MS.gene55708:intron | 35.0% | |
| TCTGAAAAGAATCTCCTTTC+TGG | - | 57371:2028-2047 | MS.gene55708:intron | 35.0% | |
| TGAGTTCGTTAGAACCTTTA+CGG | - | 57371:1054-1073 | MS.gene55708:intron | 35.0% | |
| TGTAAAGTGAGGAAATATGG+TGG | + | 57371:3898-3917 | MS.gene55708:intergenic | 35.0% | |
| TGTGGTTCTCTATGTTATGT+TGG | - | 57371:1364-1383 | MS.gene55708:intron | 35.0% | |
| TTAACAGAGGAGATGATTCA+AGG | - | 57371:4835-4854 | MS.gene55708:intron | 35.0% | |
| TTAGTGATAGGAGTCTGTAT+AGG | - | 57371:853-872 | MS.gene55708:CDS | 35.0% | |
| TTATCACAGAATAGCGTCAT+CGG | - | 57371:3741-3760 | MS.gene55708:intron | 35.0% | |
| TTATCATTGATACACCTAGC+AGG | + | 57371:3122-3141 | MS.gene55708:intergenic | 35.0% | |
| TTGATATAGATATGGTTGGG+TGG | - | 57371:3183-3202 | MS.gene55708:intron | 35.0% | |
| ! | ACCTTTTAATGCATTACCTC+AGG | + | 57371:1637-1656 | MS.gene55708:intergenic | 35.0% |
| ! | AGGGTACTAAATGTAAAGTG+AGG | + | 57371:3909-3928 | MS.gene55708:intergenic | 35.0% |
| ! | ATCTTGGTGTAAGAGGAAAA+AGG | - | 57371:2240-2259 | MS.gene55708:intron | 35.0% |
| ! | CAAAGTACAAGCTTTTCGAA+AGG | - | 57371:2164-2183 | MS.gene55708:intron | 35.0% |
| ! | CATGATATTCCACAGTTTTC+TGG | + | 57371:4716-4735 | MS.gene55708:intergenic | 35.0% |
| ! | GAAACCTTTTCTTCTTACTG+AGG | - | 57371:1090-1109 | MS.gene55708:intron | 35.0% |
| ! | TCAGCTTTCACTCATCATTT+TGG | - | 57371:4890-4909 | MS.gene55708:intron | 35.0% |
| ! | TGCTTTCATTTTATGCCAAC+AGG | + | 57371:4162-4181 | MS.gene55708:intergenic | 35.0% |
| ! | TTTCTAGCATGGGAAATTCT+AGG | - | 57371:434-453 | MS.gene55708:CDS | 35.0% |
| ! | TTTTTACTGATACAGCACAG+CGG | - | 57371:1263-1282 | MS.gene55708:intron | 35.0% |
| !! | AAGATACATAGTGGCTTTAG+TGG | + | 57371:4814-4833 | MS.gene55708:intergenic | 35.0% |
| !! | CAGCAAGCTTTTCTAGTATT+GGG | + | 57371:2812-2831 | MS.gene55708:intergenic | 35.0% |
| !! | GGAAACTCTATTTCTAGCAT+GGG | - | 57371:424-443 | MS.gene55708:CDS | 35.0% |
| !! | GTCTTTAACTTCTTTTCCTG+AGG | - | 57371:1618-1637 | MS.gene55708:intron | 35.0% |
| !! | GTGCTATTTATGCATCTTGT+TGG | - | 57371:4352-4371 | MS.gene55708:intron | 35.0% |
| !! | TGGAAACTCTATTTCTAGCA+TGG | - | 57371:423-442 | MS.gene55708:CDS | 35.0% |
| !! | TTCTCTGTGTTGATGATTCA+CGG | - | 57371:2390-2409 | MS.gene55708:intron | 35.0% |
| !! | TTTGTTAAGTGTTGGGAAAG+AGG | - | 57371:4412-4431 | MS.gene55708:intron | 35.0% |
| AACTTCAACCGTTGTGCTTA+GGG | - | 57371:2535-2554 | MS.gene55708:intron | 40.0% | |
| AAGACGTTTACTGGGATTGA+TGG | - | 57371:1829-1848 | MS.gene55708:intron | 40.0% | |
| AAGATCTTGGATCTGCTTTG+TGG | - | 57371:3558-3577 | MS.gene55708:intron | 40.0% | |
| AAGGATTACAACAGTTGGGA+TGG | - | 57371:4854-4873 | MS.gene55708:intron | 40.0% | |
| AAGTCACAAGACAACCCAAA+GGG | + | 57371:3266-3285 | MS.gene55708:intergenic | 40.0% | |
| AATGCTACCACATGCATTCT+TGG | + | 57371:4190-4209 | MS.gene55708:intergenic | 40.0% | |
| ACCTATAATAAGGACCAACC+TGG | - | 57371:2110-2129 | MS.gene55708:intron | 40.0% | |
| ACTTTAGCATCTCCACATCT+TGG | - | 57371:2224-2243 | MS.gene55708:intron | 40.0% | |
| AGATGCCATGAACAAGAACA+AGG | + | 57371:477-496 | MS.gene55708:intergenic | 40.0% | |
| AGATTAGGCAACCAATGAAC+TGG | + | 57371:4073-4092 | MS.gene55708:intergenic | 40.0% | |
| AGCTCCTCAGTAAGAAGAAA+AGG | + | 57371:1097-1116 | MS.gene55708:intergenic | 40.0% | |
| AGGTAGTCCTTCTATCAAGA+AGG | - | 57371:4023-4042 | MS.gene55708:intron | 40.0% | |
| ATGGCTTCTGATTGTGAAGA+TGG | - | 57371:2921-2940 | MS.gene55708:intron | 40.0% | |
| CAAATAAGCCTCCTAAAGAG+TGG | + | 57371:2055-2074 | MS.gene55708:intergenic | 40.0% | |
| CACACACACTCTCTTATTGA+GGG | + | 57371:1012-1031 | MS.gene55708:intergenic | 40.0% | |
| CAGCTTTGCACATAAGATCT+TGG | - | 57371:3545-3564 | MS.gene55708:intron | 40.0% | |
| CATCTCCTTGTTCTTGTTCA+TGG | - | 57371:469-488 | MS.gene55708:CDS | 40.0% | |
| CATCTGAGAGATCAATAAGG+AGG | + | 57371:4951-4970 | MS.gene55708:intergenic | 40.0% | |
| CATGAACAAGAACAAGGAGA+TGG | + | 57371:471-490 | MS.gene55708:intergenic | 40.0% | |
| CCAACAAATAAAGGAGCCAT+AGG | + | 57371:2837-2856 | MS.gene55708:intergenic | 40.0% | |
| CGGGTTATGTGTTGTAAACT+TGG | - | 57371:4382-4401 | MS.gene55708:intron | 40.0% | |
| CTATCAACCCTCCAAACTTT+GGG | + | 57371:924-943 | MS.gene55708:intergenic | 40.0% | |
| CTGTCAATTGAAGTCCACAA+GGG | - | 57371:3599-3618 | MS.gene55708:intron | 40.0% | |
| GATTAGGCAACCAATGAACT+GGG | + | 57371:4072-4091 | MS.gene55708:intergenic | 40.0% | |
| GCATATGCTTTGCAAATGCA+AGG | + | 57371:2477-2496 | MS.gene55708:intergenic | 40.0% | |
| GCCTATAATAGATCCGCAAT+TGG | + | 57371:2447-2466 | MS.gene55708:intergenic | 40.0% | |
| GCTGGTATCCATCTAAAGAT+TGG | + | 57371:4590-4609 | MS.gene55708:intergenic | 40.0% | |
| GGGAGGTAGGTTATAGTATA+AGG | - | 57371:3619-3638 | MS.gene55708:intron | 40.0% | |
| GGTAGTCCTTCTATCAAGAA+GGG | - | 57371:4024-4043 | MS.gene55708:intron | 40.0% | |
| GTTAGTACATTTCTCACCTG+TGG | - | 57371:1346-1365 | MS.gene55708:intron | 40.0% | |
| TATCCATCTAAAGATTGGCG+AGG | + | 57371:4585-4604 | MS.gene55708:intergenic | 40.0% | |
| TCACACACACTCTCTTATTG+AGG | + | 57371:1013-1032 | MS.gene55708:intergenic | 40.0% | |
| TCGTTAGAACCTTTACGGTT+AGG | - | 57371:1059-1078 | MS.gene55708:intron | 40.0% | |
| TCTATCAACCCTCCAAACTT+TGG | + | 57371:925-944 | MS.gene55708:intergenic | 40.0% | |
| TCTGTCAATTGAAGTCCACA+AGG | - | 57371:3598-3617 | MS.gene55708:intron | 40.0% | |
| TCTTTGTTCTACAACCTGCT+AGG | - | 57371:3105-3124 | MS.gene55708:intron | 40.0% | |
| TGCATTTGCAAAGCATATGC+TGG | - | 57371:2477-2496 | MS.gene55708:CDS | 40.0% | |
| TGTAGGAGTAATTGCTCATG+TGG | - | 57371:5049-5068 | MS.gene55708:CDS | 40.0% | |
| TGTTACTGTAGATCTGCACT+TGG | - | 57371:3019-3038 | MS.gene55708:intron | 40.0% | |
| TGTTCTTGTTCATGGCATCT+TGG | - | 57371:477-496 | MS.gene55708:CDS | 40.0% | |
| TGTTGGGAAAGAGGTAATGA+TGG | - | 57371:4421-4440 | MS.gene55708:intron | 40.0% | |
| TTCCAGCTTCCATTTCTGTT+GGG | - | 57371:2783-2802 | MS.gene55708:intron | 40.0% | |
| TTTCCAGCTTCCATTTCTGT+TGG | - | 57371:2782-2801 | MS.gene55708:intron | 40.0% | |
| TTTCCTCTTACACCAAGATG+TGG | + | 57371:2239-2258 | MS.gene55708:intergenic | 40.0% | |
| ! | AATAAGAGAGTGTGTGTGAG+GGG | - | 57371:1014-1033 | MS.gene55708:intron | 40.0% |
| ! | AGTACAAGCTTTTCGAAAGG+AGG | - | 57371:2167-2186 | MS.gene55708:intron | 40.0% |
| ! | CAATAAGAGAGTGTGTGTGA+GGG | - | 57371:1013-1032 | MS.gene55708:intron | 40.0% |
| ! | CCTATGGCTCCTTTATTTGT+TGG | - | 57371:2834-2853 | MS.gene55708:intron | 40.0% |
| ! | GTACAAGCTTTTCGAAAGGA+GGG | - | 57371:2168-2187 | MS.gene55708:intron | 40.0% |
| ! | TCAATAAGAGAGTGTGTGTG+AGG | - | 57371:1012-1031 | MS.gene55708:intron | 40.0% |
| ! | TGGCTCCTTTATTTGTTGGT+CGG | - | 57371:2838-2857 | MS.gene55708:intron | 40.0% |
| ! | TTCGCCTCCAAATTTTCGTA+TGG | + | 57371:4468-4487 | MS.gene55708:intergenic | 40.0% |
| !! | AAAGTCAAACTTTGGGGCAA+TGG | - | 57371:771-790 | MS.gene55708:intron | 40.0% |
| !! | AAGTGCTGGTCTATCTCTAT+GGG | - | 57371:3666-3685 | MS.gene55708:CDS | 40.0% |
| !! | AAGTTTGGAGGGTTGATAGA+AGG | - | 57371:925-944 | MS.gene55708:CDS | 40.0% |
| !! | ACCAGGTTGGTCCTTATTAT+AGG | + | 57371:2114-2133 | MS.gene55708:intergenic | 40.0% |
| !! | GCAGCAAGCTTTTCTAGTAT+TGG | + | 57371:2813-2832 | MS.gene55708:intergenic | 40.0% |
| !! | TAATGCGGTTTGTTGACAGA+GGG | + | 57371:3940-3959 | MS.gene55708:intergenic | 40.0% |
| !! | TGTGTTGATGATTCACGGTT+TGG | - | 57371:2395-2414 | MS.gene55708:intron | 40.0% |
| AACAATCATCTGTGTACCCG+AGG | - | 57371:3999-4018 | MS.gene55708:intron | 45.0% | |
| AACAGAAGAGGTGGTCTGTT+GGG | + | 57371:2897-2916 | MS.gene55708:intergenic | 45.0% | |
| AAGTAAGCAAGTGGGGACAA+AGG | - | 57371:954-973 | MS.gene55708:intron | 45.0% | |
| AATGATGGCATCCGTGTTCA+AGG | - | 57371:4436-4455 | MS.gene55708:intron | 45.0% | |
| ACAAGAACAAGGAGATGGTC+TGG | + | 57371:466-485 | MS.gene55708:intergenic | 45.0% | |
| ACCAACACATCACCTTCTAC+TGG | + | 57371:885-904 | MS.gene55708:intergenic | 45.0% | |
| ACCACCTCTTCTGTTGAGAA+TGG | - | 57371:2902-2921 | MS.gene55708:intron | 45.0% | |
| ACCAGTAGAAGGTGATGTGT+TGG | - | 57371:881-900 | MS.gene55708:CDS | 45.0% | |
| ACTATAACCTACCTCCCTTG+TGG | + | 57371:3616-3635 | MS.gene55708:intergenic | 45.0% | |
| AGTAAGCAAGTGGGGACAAA+GGG | - | 57371:955-974 | MS.gene55708:intron | 45.0% | |
| AGTAGAAGGTGATGTGTTGG+TGG | - | 57371:884-903 | MS.gene55708:CDS | 45.0% | |
| AGTCAGTTGTTCCTTACCGA+TGG | - | 57371:2867-2886 | MS.gene55708:intron | 45.0% | |
| ATAGAAGGACTACCTACCTC+GGG | + | 57371:4018-4037 | MS.gene55708:intergenic | 45.0% | |
| ATCCTCGATAAGGAGGGAAA+TGG | - | 57371:3211-3230 | MS.gene55708:intron | 45.0% | |
| ATCTTGGATCTGCTTTGTGG+TGG | - | 57371:3561-3580 | MS.gene55708:intron | 45.0% | |
| ATGTAATTACGGAGGGACAC+TGG | + | 57371:4096-4115 | MS.gene55708:intergenic | 45.0% | |
| ATTATTGGAGCTGCTAGCGA+AGG | + | 57371:2564-2583 | MS.gene55708:intergenic | 45.0% | |
| ATTCAACATCAACCACGTGC+TGG | + | 57371:4608-4627 | MS.gene55708:intergenic | 45.0% | |
| CAACTTCAACCGTTGTGCTT+AGG | - | 57371:2534-2553 | MS.gene55708:intron | 45.0% | |
| CAAGAACAAGGAGATGGTCT+GGG | + | 57371:465-484 | MS.gene55708:intergenic | 45.0% | |
| CAAGTCACAAGACAACCCAA+AGG | + | 57371:3267-3286 | MS.gene55708:intergenic | 45.0% | |
| CATGTGTCCAAGAATGCATG+TGG | - | 57371:4180-4199 | MS.gene55708:intron | 45.0% | |
| CCAGTCCGACCAACAAATAA+AGG | + | 57371:2846-2865 | MS.gene55708:intergenic | 45.0% | |
| CTGCCAATATGGACCAATTG+CGG | - | 57371:2431-2450 | MS.gene55708:intron | 45.0% | |
| CTTCAATTGACAGACACCAG+TGG | + | 57371:3592-3611 | MS.gene55708:intergenic | 45.0% | |
| GAAGCCATTCTCAACAGAAG+AGG | + | 57371:2909-2928 | MS.gene55708:intergenic | 45.0% | |
| GATAGAAGGACTACCTACCT+CGG | + | 57371:4019-4038 | MS.gene55708:intergenic | 45.0% | |
| GATCCGCAATTGGTCCATAT+TGG | + | 57371:2437-2456 | MS.gene55708:intergenic | 45.0% | |
| GTAAGGAGAAGCCCAAAGTT+TGG | - | 57371:910-929 | MS.gene55708:CDS | 45.0% | |
| TACAACACATAACCCGACAC+TGG | + | 57371:4378-4397 | MS.gene55708:intergenic | 45.0% | |
| TACTGAGGAGCTTATGCTCT+GGG | - | 57371:1105-1124 | MS.gene55708:intron | 45.0% | |
| TATAGGCCTGAACCAGTAGA+AGG | - | 57371:870-889 | MS.gene55708:CDS | 45.0% | |
| TCAATTGAAGTCCACAAGGG+AGG | - | 57371:3602-3621 | MS.gene55708:intron | 45.0% | |
| TGGTCTGTTGGGTTTACCAT+CGG | + | 57371:2886-2905 | MS.gene55708:intergenic | 45.0% | |
| TGGTGATCTTGCACACAGAA+CGG | - | 57371:2130-2149 | MS.gene55708:intron | 45.0% | |
| TGGTGTAAGAGGAAAAAGGC+AGG | - | 57371:2244-2263 | MS.gene55708:intron | 45.0% | |
| TGGTTTCACAATGCTGGTGT+AGG | - | 57371:5032-5051 | MS.gene55708:CDS | 45.0% | |
| TGTTGGGTTTACCATCGGTA+AGG | + | 57371:2881-2900 | MS.gene55708:intergenic | 45.0% | |
| TTACTGAGGAGCTTATGCTC+TGG | - | 57371:1104-1123 | MS.gene55708:intron | 45.0% | |
| TTATTGGAGCTGCTAGCGAA+GGG | + | 57371:2563-2582 | MS.gene55708:intergenic | 45.0% | |
| TTGTTCATGGCATCTTGGCT+AGG | - | 57371:482-501 | MS.gene55708:CDS | 45.0% | |
| TTTACTGGGATTGATGGAGC+AGG | - | 57371:1835-1854 | MS.gene55708:intron | 45.0% | |
| TTTAGATGGATACCAGCACG+TGG | - | 57371:4593-4612 | MS.gene55708:intron | 45.0% | |
| ! | CATGGAGGTGTATGCTAATG+CGG | + | 57371:3955-3974 | MS.gene55708:intergenic | 45.0% |
| ! | CCTTTATTTGTTGGTCGGAC+TGG | - | 57371:2843-2862 | MS.gene55708:intron | 45.0% |
| ! | GAGCAAGAGTTTGATTTCGC+AGG | + | 57371:1576-1595 | MS.gene55708:intergenic | 45.0% |
| ! | GGCACTCTCTTCCTCAATTT+TGG | - | 57371:3147-3166 | MS.gene55708:intron | 45.0% |
| ! | GTAGAAGGTGATGTGTTGGT+GGG | - | 57371:885-904 | MS.gene55708:CDS | 45.0% |
| ! | TCCACAGTTTTCTGGGTATC+AGG | + | 57371:4708-4727 | MS.gene55708:intergenic | 45.0% |
| ! | TCTCCACATCTTGGTGTAAG+AGG | - | 57371:2233-2252 | MS.gene55708:intron | 45.0% |
| !! | ACATCACCTTCTACTGGTTC+AGG | + | 57371:879-898 | MS.gene55708:intergenic | 45.0% |
| !! | AGAAAAGCTTGCTGCACCTA+TGG | - | 57371:2818-2837 | MS.gene55708:intron | 45.0% |
| !! | CTAATGCGGTTTGTTGACAG+AGG | + | 57371:3941-3960 | MS.gene55708:intergenic | 45.0% |
| !! | GAAGTGCTGGTCTATCTCTA+TGG | - | 57371:3665-3684 | MS.gene55708:CDS | 45.0% |
| AGGAGAAGCCCAAAGTTTGG+AGG | - | 57371:913-932 | MS.gene55708:CDS | 50.0% | |
| AGTTGCAAGGTCGAGTGCAA+AGG | + | 57371:3859-3878 | MS.gene55708:intergenic | 50.0% | |
| ATCATCTGTGTACCCGAGGT+AGG | - | 57371:4003-4022 | MS.gene55708:intron | 50.0% | |
| ATTGGGACGCCCAACAGAAA+TGG | + | 57371:2795-2814 | MS.gene55708:intergenic | 50.0% | |
| CAACAGAAGAGGTGGTCTGT+TGG | + | 57371:2898-2917 | MS.gene55708:intergenic | 50.0% | |
| CCAGAAGCAGGTGAAAGCAA+AGG | - | 57371:4665-4684 | MS.gene55708:intron | 50.0% | |
| CCATCTAAAGATTGGCGAGG+AGG | + | 57371:4582-4601 | MS.gene55708:intergenic | 50.0% | |
| CCTCCTCGCCAATCTTTAGA+TGG | - | 57371:4579-4598 | MS.gene55708:intron | 50.0% | |
| CCTTTGCTTTCACCTGCTTC+TGG | + | 57371:4668-4687 | MS.gene55708:intergenic | 50.0% | |
| CGAAAGGAGGGATGATTGCT+GGG | - | 57371:2180-2199 | MS.gene55708:intron | 50.0% | |
| CGCATTAGCATACACCTCCA+TGG | - | 57371:3953-3972 | MS.gene55708:intron | 50.0% | |
| CTCCATTTCCCTCCTTATCG+AGG | + | 57371:3216-3235 | MS.gene55708:intergenic | 50.0% | |
| CTCTCACTGCCTAACCGTAA+AGG | + | 57371:1071-1090 | MS.gene55708:intergenic | 50.0% | |
| CTGGTCTATCTCTATGGGCT+TGG | - | 57371:3671-3690 | MS.gene55708:CDS | 50.0% | |
| CTTTGTGGTGGTAAGTCCAC+TGG | - | 57371:3573-3592 | MS.gene55708:intron | 50.0% | |
| GAAGGGAACCCTAAGCACAA+CGG | + | 57371:2546-2565 | MS.gene55708:intergenic | 50.0% | |
| GAGGGAAATGGAGCTCAGTA+AGG | - | 57371:3223-3242 | MS.gene55708:intron | 50.0% | |
| GCCATTCTCAACAGAAGAGG+TGG | + | 57371:2906-2925 | MS.gene55708:intergenic | 50.0% | |
| GCCTGATACCCAGAAAACTG+TGG | - | 57371:4704-4723 | MS.gene55708:intron | 50.0% | |
| GCTATGGCTCAGTGTCTATG+AGG | + | 57371:3825-3844 | MS.gene55708:intergenic | 50.0% | |
| GGAAAAAGGCAGGTCTGTTC+TGG | - | 57371:2254-2273 | MS.gene55708:intron | 50.0% | |
| GGAGAAGCCCAAAGTTTGGA+GGG | - | 57371:914-933 | MS.gene55708:CDS | 50.0% | |
| GTTCTGTGTGCAAGATCACC+AGG | + | 57371:2131-2150 | MS.gene55708:intergenic | 50.0% | |
| TCCTAAAGAGTGGGCCAGAA+AGG | + | 57371:2045-2064 | MS.gene55708:intergenic | 50.0% | |
| TCGAAAGGAGGGATGATTGC+TGG | - | 57371:2179-2198 | MS.gene55708:intron | 50.0% | |
| TGCATCTTGTTGGCCAGTGT+CGG | - | 57371:4362-4381 | MS.gene55708:intron | 50.0% | |
| TGTGTGCAAGATCACCAGGT+TGG | + | 57371:2127-2146 | MS.gene55708:intergenic | 50.0% | |
| TTGAAGTCCACAAGGGAGGT+AGG | - | 57371:3606-3625 | MS.gene55708:intron | 50.0% | |
| TTGACAGAGGGTCTACCTCA+GGG | + | 57371:3928-3947 | MS.gene55708:intergenic | 50.0% | |
| TTGCTTTCACCTGCTTCTGG+AGG | + | 57371:4665-4684 | MS.gene55708:intergenic | 50.0% | |
| ! | CTGCTTCTGGAGGAAACTGA+GGG | + | 57371:4655-4674 | MS.gene55708:intergenic | 50.0% |
| ! | TCCTTTCTGGCCCACTCTTT+AGG | - | 57371:2041-2060 | MS.gene55708:intron | 50.0% |
| ! | TGATGTGTTGGTGGGCAGTA+AGG | - | 57371:893-912 | MS.gene55708:CDS | 50.0% |
| ! | TTTCTGGCCCACTCTTTAGG+AGG | - | 57371:2044-2063 | MS.gene55708:intron | 50.0% |
| !! | CGTTCATTGAAGAGGCACTC+AGG | + | 57371:1748-1767 | MS.gene55708:intergenic | 50.0% |
| !! | GCAGAGTTGAAAAAGCGCCT+TGG | - | 57371:1303-1322 | MS.gene55708:intron | 50.0% |
| AAGCAAGTGGGGACAAAGGG+AGG | - | 57371:958-977 | MS.gene55708:intron | 55.0% | |
| ACGGAGGGACACTGGAGATT+AGG | + | 57371:4088-4107 | MS.gene55708:intergenic | 55.0% | |
| ACTGATACAGCACAGCGGAC+TGG | - | 57371:1268-1287 | MS.gene55708:intron | 55.0% | |
| ACTGCAGAGTCACTGCCTGT+TGG | - | 57371:4144-4163 | MS.gene55708:intron | 55.0% | |
| AGCAAGTGGGGACAAAGGGA+GGG | - | 57371:959-978 | MS.gene55708:intron | 55.0% | |
| AGGAAACTGAGGGCCATCGA+AGG | + | 57371:4645-4664 | MS.gene55708:intergenic | 55.0% | |
| AGGAGGGATGATTGCTGGGT+TGG | - | 57371:2184-2203 | MS.gene55708:intron | 55.0% | |
| CCTCAGTTTCCTCCAGAAGC+AGG | - | 57371:4653-4672 | MS.gene55708:intron | 55.0% | |
| CGCCCAACAGAAATGGAAGC+TGG | + | 57371:2788-2807 | MS.gene55708:intergenic | 55.0% | |
| GATCTTGCACACAGAACGGC+AGG | - | 57371:2134-2153 | MS.gene55708:intron | 55.0% | |
| GCATCTTGTTGGCCAGTGTC+GGG | - | 57371:4363-4382 | MS.gene55708:intron | 55.0% | |
| GCGCACATCCTCGATAAGGA+GGG | - | 57371:3205-3224 | MS.gene55708:intron | 55.0% | |
| GGAAACTGAGGGCCATCGAA+GGG | + | 57371:4644-4663 | MS.gene55708:intergenic | 55.0% | |
| GGCAGTGACTCTGCAGTGAT+AGG | + | 57371:4141-4160 | MS.gene55708:intergenic | 55.0% | |
| GTTGACAGAGGGTCTACCTC+AGG | + | 57371:3929-3948 | MS.gene55708:intergenic | 55.0% | |
| ! | AGTGTGTGTGAGGGGTGTAG+AGG | - | 57371:1022-1041 | MS.gene55708:intron | 55.0% |
| ! | CCTGCTTCTGGAGGAAACTG+AGG | + | 57371:4656-4675 | MS.gene55708:intergenic | 55.0% |
| ! | GTGTGTGTGAGGGGTGTAGA+GGG | - | 57371:1023-1042 | MS.gene55708:intron | 55.0% |
| ! | TGAGGAGCTTATGCTCTGGG+CGG | - | 57371:1108-1127 | MS.gene55708:intron | 55.0% |
| AAGTGGGGACAAAGGGAGGG+TGG | - | 57371:962-981 | MS.gene55708:intron | 60.0% | |
| ACAAAGGGAGGGTGGTGAGC+TGG | - | 57371:970-989 | MS.gene55708:intron | 60.0% | |
| GGCGCACATCCTCGATAAGG+AGG | - | 57371:3204-3223 | MS.gene55708:intron | 60.0% | |
| GGTGGCGCACATCCTCGATA+AGG | - | 57371:3201-3220 | MS.gene55708:intron | 60.0% | |
| TTGCCCTGCAGTCCCTTCGA+TGG | - | 57371:4629-4648 | MS.gene55708:intron | 60.0% | |
| AGGGCCATCGAAGGGACTGC+AGG | + | 57371:4636-4655 | MS.gene55708:intergenic | 65.0% | |
| GGGCCATCGAAGGGACTGCA+GGG | + | 57371:4635-4654 | MS.gene55708:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57371 | gene | 406 | 5124 | 406 | ID=MS.gene55708 |
| 57371 | mRNA | 406 | 5124 | 406 | ID=MS.gene55708.t1;Parent=MS.gene55708 |
| 57371 | exon | 5027 | 5124 | 5027 | ID=MS.gene55708.t1.exon1;Parent=MS.gene55708.t1 |
| 57371 | CDS | 5027 | 5124 | 5027 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 4185 | 4252 | 4185 | ID=MS.gene55708.t1.exon2;Parent=MS.gene55708.t1 |
| 57371 | CDS | 4185 | 4252 | 4185 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 3654 | 3724 | 3654 | ID=MS.gene55708.t1.exon3;Parent=MS.gene55708.t1 |
| 57371 | CDS | 3654 | 3724 | 3654 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 3265 | 3531 | 3265 | ID=MS.gene55708.t1.exon4;Parent=MS.gene55708.t1 |
| 57371 | CDS | 3265 | 3531 | 3265 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 2578 | 2741 | 2578 | ID=MS.gene55708.t1.exon5;Parent=MS.gene55708.t1 |
| 57371 | CDS | 2578 | 2741 | 2578 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 2445 | 2500 | 2445 | ID=MS.gene55708.t1.exon6;Parent=MS.gene55708.t1 |
| 57371 | CDS | 2445 | 2500 | 2445 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 2286 | 2338 | 2286 | ID=MS.gene55708.t1.exon7;Parent=MS.gene55708.t1 |
| 57371 | CDS | 2286 | 2338 | 2286 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 783 | 951 | 783 | ID=MS.gene55708.t1.exon8;Parent=MS.gene55708.t1 |
| 57371 | CDS | 783 | 951 | 783 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 591 | 688 | 591 | ID=MS.gene55708.t1.exon9;Parent=MS.gene55708.t1 |
| 57371 | CDS | 591 | 688 | 591 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| 57371 | exon | 406 | 510 | 406 | ID=MS.gene55708.t1.exon10;Parent=MS.gene55708.t1 |
| 57371 | CDS | 406 | 510 | 406 | ID=cds.MS.gene55708.t1;Parent=MS.gene55708.t1 |
| Gene Sequence |
| Protein sequence |
