Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05996.t1 | XP_013447087.1 | 98.4 | 192 | 1 | 1 | 1 | 192 | 431 | 620 | 2.30E-82 | 315.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05996.t1 | Q38897 | 44.2 | 156 | 59 | 11 | 42 | 191 | 477 | 610 | 3.0e-14 | 80.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05996.t1 | A0A072TUA6 | 98.4 | 192 | 1 | 1 | 1 | 192 | 431 | 620 | 1.6e-82 | 315.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049656 | MS.gene05996 | 0.824568 | 7.52E-54 | -1.69E-46 |
| MS.gene049657 | MS.gene05996 | 0.841139 | 5.69E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene05996 | 0.844235 | 8.57E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene05996 | 0.80499 | 1.66E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene05996 | 0.81072 | 1.00E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene05996 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene05996 | 0.815603 | 8.50E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene05996 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene05996 | 0.808386 | 3.18E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene05996 | 0.823636 | 1.25E-53 | -1.69E-46 |
| MS.gene052066 | MS.gene05996 | 0.811505 | 6.77E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene05996 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene052166 | MS.gene05996 | -0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene05996 | 0.804913 | 1.72E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene05996 | 0.816068 | 6.69E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene05996 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene05996 | 0.808153 | 3.56E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene05996 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene05996 | 0.82642 | 2.74E-54 | -1.69E-46 |
| MS.gene052962 | MS.gene05996 | -0.803454 | 3.46E-49 | -1.69E-46 |
| MS.gene053083 | MS.gene05996 | -0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene05996 | 0.815797 | 7.69E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene05996 | 0.812506 | 4.10E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene05996 | 0.827365 | 1.63E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene05996 | -0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene05996 | 0.825545 | 4.42E-54 | -1.69E-46 |
| MS.gene056040 | MS.gene05996 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene05996 | 0.834072 | 3.70E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene05996 | 0.811365 | 7.26E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene05996 | 0.828638 | 8.04E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene05996 | 0.814968 | 1.18E-51 | -1.69E-46 |
| MS.gene059303 | MS.gene05996 | 0.812113 | 4.99E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene05996 | 0.801022 | 1.10E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene05996 | 0.940051 | 4.51E-100 | -1.69E-46 |
| MS.gene05996 | MS.gene06000 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene060187 | -0.837091 | 6.38E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene06042 | -0.809981 | 1.45E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene060595 | -0.828488 | 8.74E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene060778 | 0.804102 | 2.54E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene060871 | -0.804222 | 2.40E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene060872 | -0.846722 | 1.82E-59 | -1.69E-46 |
| MS.gene05996 | MS.gene060982 | 0.821747 | 3.43E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene061360 | 0.819618 | 1.06E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene061862 | 0.83151 | 1.60E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene061863 | 0.803282 | 3.76E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene061887 | 0.819845 | 9.38E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene062294 | 0.813249 | 2.82E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene062621 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene063062 | -0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene063146 | -0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene064062 | -0.824436 | 8.08E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene064294 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene064396 | 0.823263 | 1.52E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene064707 | 0.828837 | 7.20E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene064724 | -0.801995 | 6.92E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene065360 | 0.84201 | 3.36E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene065502 | 0.813748 | 2.19E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene065540 | 0.811933 | 5.46E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene065675 | 0.849316 | 3.50E-60 | -1.69E-46 |
| MS.gene05996 | MS.gene065996 | 0.805196 | 1.50E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene066003 | 0.827216 | 1.77E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene066030 | 0.833167 | 6.23E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene066309 | -0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene066358 | -0.807466 | 4.98E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene066359 | -0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene066534 | -0.819649 | 1.04E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene067713 | 0.849715 | 2.71E-60 | -1.69E-46 |
| MS.gene05996 | MS.gene068138 | 0.811389 | 7.18E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene068272 | 0.80359 | 3.24E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene068771 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene069568 | 0.828291 | 9.76E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene069569 | 0.820015 | 8.57E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene069855 | 0.840509 | 8.33E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene070955 | 0.819482 | 1.13E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene071690 | 0.817677 | 2.91E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene072303 | 0.861356 | 1.09E-63 | -1.69E-46 |
| MS.gene05996 | MS.gene072468 | 0.82231 | 2.54E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene072496 | 0.803851 | 2.86E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene073118 | 0.820456 | 6.80E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene07329 | 0.85762 | 1.44E-62 | -1.69E-46 |
| MS.gene05996 | MS.gene073640 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene073883 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene074380 | 0.810386 | 1.18E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene074598 | 0.811661 | 6.26E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene07636 | 0.841643 | 4.20E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene08254 | 0.832209 | 1.08E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene08322 | -0.8144 | 1.57E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene08523 | 0.816644 | 4.97E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene08588 | 0.837272 | 5.73E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene08919 | -0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene08964 | 0.841108 | 5.80E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene09022 | -0.851738 | 7.30E-61 | -1.69E-46 |
| MS.gene05996 | MS.gene09053 | 0.838541 | 2.70E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene09072 | -0.809225 | 2.10E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene09795 | 0.835399 | 1.72E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene09797 | 0.823942 | 1.06E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene09798 | 0.803741 | 3.02E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene09865 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene20594 | 0.805974 | 1.03E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene20813 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene20816 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene20817 | 0.806209 | 9.19E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene20878 | 0.845693 | 3.46E-59 | -1.69E-46 |
| MS.gene05996 | MS.gene20932 | 0.817808 | 2.72E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene21150 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene22475 | 0.818495 | 1.90E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene22588 | 0.815146 | 1.07E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene22869 | 0.821666 | 3.58E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene23115 | 0.812927 | 3.31E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene24082 | 0.811748 | 6.00E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene24562 | 0.82302 | 1.73E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene24631 | 0.813472 | 2.52E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene24857 | 0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene26532 | -0.84047 | 8.53E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene27116 | 0.816176 | 6.33E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene27876 | 0.834577 | 2.77E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene27893 | 0.816099 | 6.58E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene27981 | 0.834581 | 2.76E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene29014 | 0.808292 | 3.33E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene29028 | 0.811226 | 7.78E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene29115 | 0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene29182 | 0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene30217 | -0.832471 | 9.28E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene30743 | 0.832088 | 1.15E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene31105 | 0.857894 | 1.20E-62 | -1.69E-46 |
| MS.gene05996 | MS.gene31106 | 0.851309 | 9.66E-61 | -1.69E-46 |
| MS.gene05996 | MS.gene31869 | 0.803454 | 3.46E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene32652 | 0.805351 | 1.39E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene32677 | 0.843331 | 1.50E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene32996 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene33017 | 0.805654 | 1.20E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene33309 | 0.820436 | 6.87E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene33768 | 0.806899 | 6.57E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene33980 | -0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene34038 | 0.848052 | 7.84E-60 | -1.69E-46 |
| MS.gene05996 | MS.gene34092 | 0.807369 | 5.23E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene34171 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene34383 | 0.82207 | 2.88E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene34472 | 0.814065 | 1.86E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene34554 | 0.813881 | 2.04E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene35338 | 0.806515 | 7.93E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene35712 | 0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene36240 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene36337 | 0.836878 | 7.23E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene38118 | -0.806519 | 7.91E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene40110 | 0.825811 | 3.82E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene41234 | 0.804818 | 1.80E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene41334 | 0.8021 | 6.58E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene42301 | 0.837752 | 4.32E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene42674 | 0.800782 | 1.23E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene42835 | -0.803749 | 3.00E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene42884 | 0.801521 | 8.66E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene43618 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene43963 | 0.807899 | 4.03E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene44099 | 0.819734 | 9.94E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene44305 | 0.824631 | 7.27E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene44439 | 0.837334 | 5.53E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene44440 | 0.841978 | 3.42E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene44639 | 0.82525 | 5.19E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene45542 | 0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene45607 | 0.824631 | 7.27E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene45747 | 0.809708 | 1.66E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene45913 | 0.812124 | 4.96E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene47989 | 0.831294 | 1.81E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene48646 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene48648 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene48649 | 0.804427 | 2.17E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene49871 | 0.821278 | 4.40E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene49872 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene49873 | 0.817052 | 4.03E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene49874 | 0.827376 | 1.62E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene50638 | 0.837763 | 4.29E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene51603 | 0.82391 | 1.07E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene51612 | -0.815149 | 1.07E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene51840 | 0.817986 | 2.48E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene51887 | 0.830594 | 2.69E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene52725 | 0.801489 | 8.79E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene52739 | 0.821146 | 4.72E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene52976 | 0.822941 | 1.81E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene53390 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene54068 | 0.831891 | 1.29E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene54413 | 0.826571 | 2.52E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene54718 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene54881 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene55657 | 0.831455 | 1.65E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene55698 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene55708 | 0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene55726 | 0.901775 | 1.90E-78 | -1.69E-46 |
| MS.gene05996 | MS.gene55727 | 0.838357 | 3.02E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene55731 | 0.814091 | 1.84E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene55771 | -0.870861 | 1.06E-66 | -1.69E-46 |
| MS.gene05996 | MS.gene55803 | 0.807699 | 4.45E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene56598 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene57140 | 0.822603 | 2.17E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene57239 | 0.824224 | 9.06E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene57264 | 0.806285 | 8.86E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene57394 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene57602 | 0.824273 | 8.83E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene57998 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene58165 | 0.825156 | 5.47E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene59657 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene60176 | 0.840031 | 1.11E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene60177 | 0.838083 | 3.55E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene60360 | 0.800582 | 1.35E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene61144 | 0.83554 | 1.58E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene61145 | 0.841059 | 5.98E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene61919 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene62191 | 0.805656 | 1.20E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene62982 | 0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene63050 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene63567 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene63749 | -0.848945 | 4.43E-60 | -1.69E-46 |
| MS.gene05996 | MS.gene63751 | -0.878219 | 3.35E-69 | -1.69E-46 |
| MS.gene05996 | MS.gene64151 | 0.804892 | 1.74E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene64286 | 0.831776 | 1.38E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene65400 | 0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene65516 | -0.809539 | 1.80E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene65675 | 0.819462 | 1.15E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene65986 | -0.823759 | 1.16E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene66304 | -0.816831 | 4.51E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene66774 | 0.81595 | 7.11E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene67656 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene68529 | 0.829036 | 6.44E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene68722 | -0.81658 | 5.14E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene68980 | 0.873921 | 1.01E-67 | -1.69E-46 |
| MS.gene05996 | MS.gene69332 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene69450 | 0.832957 | 7.03E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene69607 | -0.803129 | 4.04E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene69749 | 0.817055 | 4.02E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene70212 | 0.809229 | 2.10E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene70306 | 0.82523 | 5.25E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene70491 | -0.826991 | 2.00E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene71182 | -0.804316 | 2.29E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene71267 | 0.805411 | 1.35E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene71420 | 0.838793 | 2.33E-57 | -1.69E-46 |
| MS.gene05996 | MS.gene71651 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene71697 | 0.827415 | 1.58E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene72055 | 0.825388 | 4.82E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene72111 | -0.870232 | 1.70E-66 | -1.69E-46 |
| MS.gene05996 | MS.gene72786 | 0.818761 | 1.66E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene72916 | 0.814278 | 1.67E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene73493 | 0.812568 | 3.97E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene73544 | 0.823717 | 1.19E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene73545 | 0.840711 | 7.37E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene73660 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene74228 | 0.814216 | 1.73E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene74240 | 0.815126 | 1.08E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene74575 | 0.828927 | 6.85E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene75560 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene75750 | 0.805886 | 1.07E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene76521 | 0.833852 | 4.20E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene76840 | 0.810812 | 9.57E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene77595 | -0.818652 | 1.75E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene78281 | 0.813929 | 2.00E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene78325 | -0.817145 | 3.84E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene78396 | 0.850973 | 1.20E-60 | -1.69E-46 |
| MS.gene05996 | MS.gene78602 | 0.805911 | 1.06E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene78942 | 0.806136 | 9.53E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene79284 | 0.817885 | 2.61E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene80210 | 0.834418 | 3.03E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene81747 | 0.803579 | 3.26E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene82707 | 0.811359 | 7.28E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene82917 | 0.828109 | 1.08E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene83251 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene85136 | 0.841565 | 4.40E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene86071 | 0.831474 | 1.64E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene86293 | 0.833626 | 4.79E-56 | -1.69E-46 |
| MS.gene05996 | MS.gene87473 | 0.819842 | 9.39E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene88640 | 0.825558 | 4.39E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene88820 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene89722 | 0.812605 | 3.90E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene90269 | 0.804984 | 1.66E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene91075 | -0.85574 | 5.15E-62 | -1.69E-46 |
| MS.gene05996 | MS.gene91078 | -0.80165 | 8.14E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene91156 | 0.81921 | 1.31E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene91392 | 0.829927 | 3.91E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene92636 | 0.823841 | 1.11E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene92989 | 0.80683 | 6.80E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene93165 | 0.829974 | 3.81E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene94356 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene94628 | 0.815457 | 9.16E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene96194 | -0.826543 | 2.56E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene97422 | 0.825104 | 5.62E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene97437 | -0.821599 | 3.71E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene97656 | 0.857574 | 1.49E-62 | -1.69E-46 |
| MS.gene05996 | MS.gene97726 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene97862 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene98139 | 0.807041 | 6.13E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene98166 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene99003 | -0.805793 | 1.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05996.t1 | MTR_8g098815 | 98.958 | 192 | 0 | 1 | 1 | 192 | 431 | 620 | 5.96e-135 | 391 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05996.t1 | AT5G41410 | 38.889 | 198 | 76 | 12 | 1 | 192 | 453 | 611 | 5.96e-22 | 92.8 |
Find 47 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGGTTCAGTACTCTCTTT+TGG | 0.253768 | 4.1:-5486313 | MS.gene05996:CDS |
| CAAACGCATCCGCGGCTAAT+TGG | 0.275675 | 4.1:+5486553 | None:intergenic |
| AATGGTGGAAGAAATGTATT+TGG | 0.286857 | 4.1:-5486799 | MS.gene05996:CDS |
| ACTGAACCGGTTCTTCAATT+TGG | 0.298745 | 4.1:+5486325 | None:intergenic |
| CATGAGGTTGAGTTTGAGAT+TGG | 0.355537 | 4.1:+5486685 | None:intergenic |
| CAATTAGCCGCGGATGCGTT+TGG | 0.383986 | 4.1:-5486552 | MS.gene05996:CDS |
| GGTGGAGTGTCATTGACGTT+AGG | 0.399182 | 4.1:-5486426 | MS.gene05996:CDS |
| TTACAACAACATGGTGGAAA+TGG | 0.409545 | 4.1:-5486402 | MS.gene05996:CDS |
| CTCCACCACTGCTGCCACCT+TGG | 0.420187 | 4.1:+5486442 | None:intergenic |
| TGGTGGAAATGGAGTGAGTT+TGG | 0.455316 | 4.1:-5486391 | MS.gene05996:CDS |
| AAATACATTTCTTCCACCAT+TGG | 0.455432 | 4.1:+5486801 | None:intergenic |
| ATGATTGTTGTTGATGATAG+AGG | 0.462600 | 4.1:+5486617 | None:intergenic |
| CACCACTGCTGCCACCTTGG+TGG | 0.462654 | 4.1:+5486445 | None:intergenic |
| AAGGGACCAAATTGAAGAAC+CGG | 0.465720 | 4.1:-5486331 | MS.gene05996:CDS |
| GTGGAGTGTCATTGACGTTA+GGG | 0.474230 | 4.1:-5486425 | MS.gene05996:CDS |
| GAACAAATATTATGCCATAC+AGG | 0.476848 | 4.1:-5486281 | MS.gene05996:CDS |
| CACCAAGGTGGCAGCAGTGG+TGG | 0.491693 | 4.1:-5486444 | MS.gene05996:CDS |
| TCCAAAAGAGAGTACTGAAC+CGG | 0.513134 | 4.1:+5486312 | None:intergenic |
| TTCCACCAAGGTGGCAGCAG+TGG | 0.532318 | 4.1:-5486447 | MS.gene05996:CDS |
| GACACAATTGCTACATGACT+TGG | 0.534189 | 4.1:-5486247 | MS.gene05996:CDS |
| ACGACTCCTTCGAATCGATT+CGG | 0.534329 | 4.1:-5486649 | MS.gene05996:CDS |
| AACACGACAACCTCGGACGG+AGG | 0.540366 | 4.1:-5486753 | MS.gene05996:CDS |
| AGCCGCGGATGCGTTTGGAT+CGG | 0.552377 | 4.1:-5486547 | MS.gene05996:CDS |
| ACATCATTCTTCTTCTGACA+TGG | 0.555858 | 4.1:-5486496 | MS.gene05996:CDS |
| ACAAAGAAACACGACAACCT+CGG | 0.564649 | 4.1:-5486760 | MS.gene05996:CDS |
| CACATTCCGAATCGATTCGA+AGG | 0.565105 | 4.1:+5486643 | None:intergenic |
| AGAGTCCAATGTTCTATACA+AGG | 0.568503 | 4.1:-5486350 | MS.gene05996:CDS |
| ATCTCAAACTCAACCTCATG+AGG | 0.577882 | 4.1:-5486682 | MS.gene05996:CDS |
| ATGCCATACAGGAATCTCAT+GGG | 0.578629 | 4.1:-5486270 | MS.gene05996:CDS |
| TGGTCCCTTGTATAGAACAT+TGG | 0.582832 | 4.1:+5486345 | None:intergenic |
| AGAAACACGACAACCTCGGA+CGG | 0.587887 | 4.1:-5486756 | MS.gene05996:CDS |
| AACATTGGACTCTGTGATGT+TGG | 0.591723 | 4.1:+5486360 | None:intergenic |
| AATATTGTTTCCTCCGTCCG+AGG | 0.597602 | 4.1:+5486743 | None:intergenic |
| GTCCCCATGAGATTCCTGTA+TGG | 0.609295 | 4.1:+5486267 | None:intergenic |
| GAATCGATTCGAAGGAGTCG+TGG | 0.616503 | 4.1:+5486651 | None:intergenic |
| TATGCCATACAGGAATCTCA+TGG | 0.626506 | 4.1:-5486271 | MS.gene05996:CDS |
| ATTGGACTCTGTGATGTTGG+TGG | 0.631848 | 4.1:+5486363 | None:intergenic |
| TTGGACTCTGTGATGTTGGT+GGG | 0.640625 | 4.1:+5486364 | None:intergenic |
| AACCGATCCAAACGCATCCG+CGG | 0.640907 | 4.1:+5486545 | None:intergenic |
| GAGTCCAATGTTCTATACAA+GGG | 0.649085 | 4.1:-5486349 | MS.gene05996:CDS |
| GAATCATCACCAATTAGCCG+CGG | 0.649592 | 4.1:-5486562 | MS.gene05996:CDS |
| ATGGTTGCTGCTTACACAAG+TGG | 0.652558 | 4.1:-5486477 | MS.gene05996:CDS |
| ACGTTAGGGTTACAACAACA+TGG | 0.673570 | 4.1:-5486411 | MS.gene05996:CDS |
| TGCCATACAGGAATCTCATG+GGG | 0.679427 | 4.1:-5486269 | MS.gene05996:CDS |
| GGTGAGAGTTTCCACCAAGG+TGG | 0.686723 | 4.1:-5486456 | MS.gene05996:CDS |
| AGTGGTGAGAGTTTCCACCA+AGG | 0.759976 | 4.1:-5486459 | MS.gene05996:CDS |
| TTAGGGTTACAACAACATGG+TGG | 0.784784 | 4.1:-5486408 | MS.gene05996:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGGTTTTGAAGTACATTA+AGG | + | chr4.1:5486340-5486359 | None:intergenic | 25.0% |
| GAACAAATATTATGCCATAC+AGG | - | chr4.1:5486759-5486778 | MS.gene05996:CDS | 30.0% | |
| !! | ATGATTGTTGTTGATGATAG+AGG | + | chr4.1:5486426-5486445 | None:intergenic | 30.0% |
| ACATCATTCTTCTTCTGACA+TGG | - | chr4.1:5486544-5486563 | MS.gene05996:CDS | 35.0% | |
| AGAGTCCAATGTTCTATACA+AGG | - | chr4.1:5486690-5486709 | MS.gene05996:CDS | 35.0% | |
| GAGTCCAATGTTCTATACAA+GGG | - | chr4.1:5486691-5486710 | MS.gene05996:CDS | 35.0% | |
| ! | TTACAACAACATGGTGGAAA+TGG | - | chr4.1:5486638-5486657 | MS.gene05996:CDS | 35.0% |
| AACATTGGACTCTGTGATGT+TGG | + | chr4.1:5486683-5486702 | None:intergenic | 40.0% | |
| AAGGGACCAAATTGAAGAAC+CGG | - | chr4.1:5486709-5486728 | MS.gene05996:CDS | 40.0% | |
| ACAAAGAAACACGACAACCT+CGG | - | chr4.1:5486280-5486299 | MS.gene05996:CDS | 40.0% | |
| ACGTTAGGGTTACAACAACA+TGG | - | chr4.1:5486629-5486648 | MS.gene05996:CDS | 40.0% | |
| ATCTCAAACTCAACCTCATG+AGG | - | chr4.1:5486358-5486377 | MS.gene05996:CDS | 40.0% | |
| ATGCCATACAGGAATCTCAT+GGG | - | chr4.1:5486770-5486789 | MS.gene05996:CDS | 40.0% | |
| GACACAATTGCTACATGACT+TGG | - | chr4.1:5486793-5486812 | MS.gene05996:CDS | 40.0% | |
| TATGCCATACAGGAATCTCA+TGG | - | chr4.1:5486769-5486788 | MS.gene05996:CDS | 40.0% | |
| TGGTCCCTTGTATAGAACAT+TGG | + | chr4.1:5486698-5486717 | None:intergenic | 40.0% | |
| TTAGGGTTACAACAACATGG+TGG | - | chr4.1:5486632-5486651 | MS.gene05996:CDS | 40.0% | |
| ! | ACTGAACCGGTTCTTCAATT+TGG | + | chr4.1:5486718-5486737 | None:intergenic | 40.0% |
| ! | CATGAGGTTGAGTTTGAGAT+TGG | + | chr4.1:5486358-5486377 | None:intergenic | 40.0% |
| ! | GTTCAGTACTCTCTTTTGGA+TGG | - | chr4.1:5486731-5486750 | MS.gene05996:CDS | 40.0% |
| ! | TACTCTCTTTTGGATGGTGA+AGG | - | chr4.1:5486737-5486756 | MS.gene05996:CDS | 40.0% |
| !! | TCCAAAAGAGAGTACTGAAC+CGG | + | chr4.1:5486731-5486750 | None:intergenic | 40.0% |
| AATATTGTTTCCTCCGTCCG+AGG | + | chr4.1:5486300-5486319 | None:intergenic | 45.0% | |
| ACGACTCCTTCGAATCGATT+CGG | - | chr4.1:5486391-5486410 | MS.gene05996:CDS | 45.0% | |
| ATTGGACTCTGTGATGTTGG+TGG | + | chr4.1:5486680-5486699 | None:intergenic | 45.0% | |
| GAATCATCACCAATTAGCCG+CGG | - | chr4.1:5486478-5486497 | MS.gene05996:CDS | 45.0% | |
| TGCCATACAGGAATCTCATG+GGG | - | chr4.1:5486771-5486790 | MS.gene05996:CDS | 45.0% | |
| TGGTGGAAATGGAGTGAGTT+TGG | - | chr4.1:5486649-5486668 | MS.gene05996:CDS | 45.0% | |
| TTGGACTCTGTGATGTTGGT+GGG | + | chr4.1:5486679-5486698 | None:intergenic | 45.0% | |
| ! | ATGGTTGCTGCTTACACAAG+TGG | - | chr4.1:5486563-5486582 | MS.gene05996:CDS | 45.0% |
| ! | GTGGAGTGTCATTGACGTTA+GGG | - | chr4.1:5486615-5486634 | MS.gene05996:CDS | 45.0% |
| !! | ACCGGTTCAGTACTCTCTTT+TGG | - | chr4.1:5486727-5486746 | MS.gene05996:CDS | 45.0% |
| !! | CACATTCCGAATCGATTCGA+AGG | + | chr4.1:5486400-5486419 | None:intergenic | 45.0% |
| AGAAACACGACAACCTCGGA+CGG | - | chr4.1:5486284-5486303 | MS.gene05996:CDS | 50.0% | |
| AGTGGTGAGAGTTTCCACCA+AGG | - | chr4.1:5486581-5486600 | MS.gene05996:CDS | 50.0% | |
| GTCCCCATGAGATTCCTGTA+TGG | + | chr4.1:5486776-5486795 | None:intergenic | 50.0% | |
| ! | CGTGGCTTTTGATCCTCATG+AGG | + | chr4.1:5486374-5486393 | None:intergenic | 50.0% |
| ! | GGTGGAGTGTCATTGACGTT+AGG | - | chr4.1:5486614-5486633 | MS.gene05996:CDS | 50.0% |
| !! | GAATCGATTCGAAGGAGTCG+TGG | + | chr4.1:5486392-5486411 | None:intergenic | 50.0% |
| AACCGATCCAAACGCATCCG+CGG | + | chr4.1:5486498-5486517 | None:intergenic | 55.0% | |
| CAAACGCATCCGCGGCTAAT+TGG | + | chr4.1:5486490-5486509 | None:intergenic | 55.0% | |
| CAATTAGCCGCGGATGCGTT+TGG | - | chr4.1:5486488-5486507 | MS.gene05996:CDS | 55.0% | |
| GGTGAGAGTTTCCACCAAGG+TGG | - | chr4.1:5486584-5486603 | MS.gene05996:CDS | 55.0% | |
| AACACGACAACCTCGGACGG+AGG | - | chr4.1:5486287-5486306 | MS.gene05996:CDS | 60.0% | |
| AGCCGCGGATGCGTTTGGAT+CGG | - | chr4.1:5486493-5486512 | MS.gene05996:CDS | 60.0% | |
| TTCCACCAAGGTGGCAGCAG+TGG | - | chr4.1:5486593-5486612 | MS.gene05996:CDS | 60.0% | |
| CACCAAGGTGGCAGCAGTGG+TGG | - | chr4.1:5486596-5486615 | MS.gene05996:CDS | 65.0% | |
| CACCACTGCTGCCACCTTGG+TGG | + | chr4.1:5486598-5486617 | None:intergenic | 65.0% | |
| CTCCACCACTGCTGCCACCT+TGG | + | chr4.1:5486601-5486620 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 5486242 | 5486820 | 5486242 | ID=MS.gene05996 |
| chr4.1 | mRNA | 5486242 | 5486820 | 5486242 | ID=MS.gene05996.t1;Parent=MS.gene05996 |
| chr4.1 | exon | 5486242 | 5486820 | 5486242 | ID=MS.gene05996.t1.exon1;Parent=MS.gene05996.t1 |
| chr4.1 | CDS | 5486242 | 5486820 | 5486242 | ID=cds.MS.gene05996.t1;Parent=MS.gene05996.t1 |
| Gene Sequence |
| Protein sequence |
