Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56356.t1 | XP_003625428.1 | 87.2 | 624 | 54 | 1 | 1 | 598 | 1 | 624 | 1.30E-232 | 815.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56356.t1 | Q9C950 | 57.9 | 532 | 215 | 5 | 72 | 598 | 116 | 643 | 6.4e-140 | 499.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56356.t1 | G7KYI5 | 87.2 | 624 | 54 | 1 | 1 | 598 | 1 | 624 | 9.2e-233 | 815.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049685 | MS.gene56356 | 0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene56356 | 0.822473 | 2.32E-53 | -1.69E-46 |
| MS.gene050317 | MS.gene56356 | 0.810504 | 1.12E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene56356 | 0.808197 | 3.49E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene56356 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene050386 | MS.gene56356 | 0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene56356 | 0.814642 | 1.39E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene56356 | 0.805509 | 1.29E-49 | -1.69E-46 |
| MS.gene051381 | MS.gene56356 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene56356 | 0.821852 | 3.24E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene56356 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene56356 | 0.800883 | 1.17E-48 | -1.69E-46 |
| MS.gene054823 | MS.gene56356 | 0.806441 | 8.21E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene56356 | 0.821091 | 4.85E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene56356 | 0.811328 | 7.40E-51 | -1.69E-46 |
| MS.gene058055 | MS.gene56356 | 0.804749 | 1.86E-49 | -1.69E-46 |
| MS.gene058646 | MS.gene56356 | 0.807046 | 6.12E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene56356 | 0.804413 | 2.19E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene56356 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene060296 | MS.gene56356 | 0.810521 | 1.11E-50 | -1.69E-46 |
| MS.gene060563 | MS.gene56356 | 0.82362 | 1.26E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56356.t1 | MTR_7g099060 | 89.583 | 624 | 39 | 1 | 1 | 598 | 1 | 624 | 0.0 | 1025 |
| MS.gene56356.t1 | MTR_4g089070 | 63.623 | 657 | 178 | 8 | 1 | 598 | 1 | 655 | 0.0 | 773 |
| MS.gene56356.t1 | MTR_4g032885 | 49.247 | 664 | 254 | 11 | 1 | 598 | 1 | 647 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56356.t1 | AT1G61040 | 63.074 | 566 | 196 | 7 | 40 | 598 | 84 | 643 | 0.0 | 633 |
| MS.gene56356.t1 | AT1G61040 | 63.074 | 566 | 196 | 7 | 40 | 598 | 84 | 643 | 0.0 | 633 |
| MS.gene56356.t1 | AT1G61040 | 63.074 | 566 | 196 | 7 | 40 | 598 | 84 | 643 | 0.0 | 633 |
Find 153 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTTACAAAATGGTTTA+TGG | 0.170699 | 3.1:-6831576 | MS.gene56356:CDS |
| CGTCCTTCTCCCGAGATTTC+CGG | 0.188455 | 3.1:+6831030 | None:intergenic |
| GGGAGTTCAGGCAGGGTTTA+TGG | 0.216936 | 3.1:-6830607 | MS.gene56356:CDS |
| AAAGAGGGGTCTAAAATTTC+AGG | 0.225292 | 3.1:-6831800 | MS.gene56356:CDS |
| TGGCTTGAGCTACTGAAATT+AGG | 0.237330 | 3.1:+6831749 | None:intergenic |
| GCTTTCAATGCTTTATTAAC+TGG | 0.248153 | 3.1:+6830933 | None:intergenic |
| TGCCACATTGCTAGCGATAT+TGG | 0.272264 | 3.1:+6830648 | None:intergenic |
| CAAGGTCAAAACTTACAAAA+TGG | 0.282281 | 3.1:-6831583 | MS.gene56356:CDS |
| CAGAGAATTGAAGAAGTTGT+TGG | 0.303542 | 3.1:-6830576 | MS.gene56356:CDS |
| TTCTCAGCTGCAACATTTAG+TGG | 0.306966 | 3.1:+6831149 | None:intergenic |
| GTCCTTCTCCCGAGATTTCC+GGG | 0.324137 | 3.1:+6831031 | None:intergenic |
| TGGTGGAGCGCAGGGAGTTC+AGG | 0.326248 | 3.1:-6830619 | MS.gene56356:CDS |
| GACGGCCACTGCCGAGGCTT+TGG | 0.334682 | 3.1:-6830760 | MS.gene56356:CDS |
| TGATTGTTGGTTGTTTCGTT+AGG | 0.335264 | 3.1:-6831535 | MS.gene56356:CDS |
| GAGGCTTTGGAAGCTGCTGC+TGG | 0.336521 | 3.1:-6830747 | MS.gene56356:CDS |
| TTGGAAGCTGCTGCTGGTGC+TGG | 0.337203 | 3.1:-6830741 | MS.gene56356:CDS |
| CTAGTCCATCTCCTTGAAAA+AGG | 0.345767 | 3.1:+6830891 | None:intergenic |
| TCTAATTTATACAGTCGATT+AGG | 0.352085 | 3.1:+6831440 | None:intergenic |
| TGATTTAGAAAATGACCTTT+TGG | 0.354336 | 3.1:-6832260 | MS.gene56356:CDS |
| GTCACGCTTGGATGCTATCT+TGG | 0.378668 | 3.1:+6831982 | None:intergenic |
| TTCAGCTCGCGATGTGCTTC+CGG | 0.380178 | 3.1:+6831821 | None:intergenic |
| TACATTTCCCTTGTCACGCT+TGG | 0.383575 | 3.1:+6831970 | None:intergenic |
| GACTCTGTTCCTTCATCCAC+TGG | 0.384610 | 3.1:+6830696 | None:intergenic |
| CCAGACAAAACTGCAAGAAT+TGG | 0.386133 | 3.1:-6831060 | MS.gene56356:CDS |
| CTGAGATGAACAGAAAGAAC+AGG | 0.394551 | 3.1:-6830989 | MS.gene56356:CDS |
| ACCTACTTTCACTTTCACTA+TGG | 0.405201 | 3.1:+6831729 | None:intergenic |
| GGAGCGCAGGGAGTTCAGGC+AGG | 0.411409 | 3.1:-6830615 | MS.gene56356:CDS |
| GCAGCTGGAAATAATACTTC+TGG | 0.411995 | 3.1:-6830828 | MS.gene56356:CDS |
| TCTGGTGGTGCAGTGGGTGA+TGG | 0.416049 | 3.1:-6830810 | MS.gene56356:CDS |
| ACAAGTACTTGAATGTTGTC+TGG | 0.416298 | 3.1:-6831403 | MS.gene56356:CDS |
| TGTTTCGTTAGGGTTGGTAT+TGG | 0.420135 | 3.1:-6831524 | MS.gene56356:CDS |
| CTCTGCTGCGAGGTGGCAAA+TGG | 0.421789 | 3.1:-6831369 | MS.gene56356:CDS |
| GGACCGGTTGAAAAGGGAAT+TGG | 0.431061 | 3.1:-6831126 | MS.gene56356:CDS |
| GGGTCTAAAATTTCAGGATC+AGG | 0.435083 | 3.1:-6831794 | MS.gene56356:CDS |
| CCAGCTGCAGCCTCTTCAGC+CGG | 0.436278 | 3.1:+6830843 | None:intergenic |
| CTGAGAAGGACCGGTTGAAA+AGG | 0.436446 | 3.1:-6831133 | MS.gene56356:CDS |
| GATGGAGGCTGCAATGGGAT+TGG | 0.437943 | 3.1:-6830792 | MS.gene56356:CDS |
| GTCTGATAGGGCTGCTAAGA+AGG | 0.438794 | 3.1:-6832023 | MS.gene56356:CDS |
| GGAGTTTAAACAGTGGGTTA+AGG | 0.439170 | 3.1:-6831315 | MS.gene56356:CDS |
| CTAGCAATGTGGCAAAAGTT+TGG | 0.440126 | 3.1:-6830639 | MS.gene56356:CDS |
| GTTGGTTGTTTCGTTAGGGT+TGG | 0.442169 | 3.1:-6831530 | MS.gene56356:CDS |
| TCGTTAGGGTTGGTATTGGC+AGG | 0.445479 | 3.1:-6831520 | MS.gene56356:CDS |
| GCATTGAAAGCAGGGGAGGC+AGG | 0.447530 | 3.1:-6830921 | MS.gene56356:CDS |
| AAATTAGGTTTCCCTATTTG+CGG | 0.450487 | 3.1:+6831764 | None:intergenic |
| GTTAATAAAGCATTGAAAGC+AGG | 0.455533 | 3.1:-6830930 | MS.gene56356:CDS |
| TGGAGGAATCCCGGAAATCT+CGG | 0.458345 | 3.1:-6831040 | MS.gene56356:CDS |
| CAAAGACTGGGCCTATCTAC+AGG | 0.458836 | 3.1:-6831496 | MS.gene56356:CDS |
| CCGGCTGAAGAGGCTGCAGC+TGG | 0.464826 | 3.1:-6830843 | MS.gene56356:CDS |
| TTCTGACAGGTCAGCTGCTA+AGG | 0.465616 | 3.1:-6831891 | MS.gene56356:CDS |
| CTCAGAAAGCCTCAGAGCCT+TGG | 0.470974 | 3.1:+6831007 | None:intergenic |
| GAACTACTATAATTCAAAAC+CGG | 0.473536 | 3.1:-6830862 | MS.gene56356:CDS |
| ATTTGAAAAGCCATCGTTTG+AGG | 0.474055 | 3.1:-6831627 | MS.gene56356:CDS |
| GCAAAAGTTTGGTGGAGCGC+AGG | 0.478459 | 3.1:-6830628 | MS.gene56356:CDS |
| GATTGTTGGTTGTTTCGTTA+GGG | 0.478505 | 3.1:-6831534 | MS.gene56356:CDS |
| GTGGGTGATGGAGGCTGCAA+TGG | 0.479445 | 3.1:-6830798 | MS.gene56356:CDS |
| GCCTATCTACAGGCTCTGTA+TGG | 0.481256 | 3.1:-6831486 | MS.gene56356:CDS |
| AGCAGCAGCTTCCAAAGCCT+CGG | 0.484282 | 3.1:+6830749 | None:intergenic |
| GGTATTGGCAGGTCAAAGAC+TGG | 0.484693 | 3.1:-6831509 | MS.gene56356:CDS |
| CAAGGAGATGGACTAGATCA+AGG | 0.488397 | 3.1:-6830884 | MS.gene56356:CDS |
| ATCAGAGTCATCATCGTCTC+CGG | 0.491148 | 3.1:+6832177 | None:intergenic |
| GTTCTGACCGTGAGGTGGAC+AGG | 0.495463 | 3.1:-6832141 | MS.gene56356:CDS |
| CAAGTACTTGAATGTTGTCT+GGG | 0.495702 | 3.1:-6831402 | MS.gene56356:CDS |
| GGCTGCAATGGGATTGGAGC+TGG | 0.501509 | 3.1:-6830786 | MS.gene56356:CDS |
| AACATTCAAGTACTTGTATG+TGG | 0.501552 | 3.1:+6831409 | None:intergenic |
| GTTTAAACTCCTCCTCAAGC+GGG | 0.503277 | 3.1:+6831327 | None:intergenic |
| ACCATACAGAGCCTGTAGAT+AGG | 0.505421 | 3.1:+6831485 | None:intergenic |
| TGCAAGAATTGGAGGAATCC+CGG | 0.506961 | 3.1:-6831049 | MS.gene56356:CDS |
| GAAAGCAAGAACGATGCAGC+TGG | 0.509713 | 3.1:-6831095 | MS.gene56356:CDS |
| AGCTTCCAAAGCCTCGGCAG+TGG | 0.512251 | 3.1:+6830755 | None:intergenic |
| TGCTGCTGGTGCTGGAAAGT+TGG | 0.516833 | 3.1:-6830733 | MS.gene56356:CDS |
| CTTCAACATCCTCGTCACTA+CGG | 0.517935 | 3.1:+6831705 | None:intergenic |
| AAGCTTTGTCTGAAAATGAA+GGG | 0.520209 | 3.1:-6831685 | MS.gene56356:CDS |
| CGATGATCTTTACAAGGATG+AGG | 0.522524 | 3.1:-6832098 | MS.gene56356:CDS |
| GACAAAACTGCAAGAATTGG+AGG | 0.524371 | 3.1:-6831057 | MS.gene56356:CDS |
| TTCAACATCCTCGTCACTAC+GGG | 0.525338 | 3.1:+6831706 | None:intergenic |
| TGAGAAGGACCGGTTGAAAA+GGG | 0.526022 | 3.1:-6831132 | MS.gene56356:CDS |
| GGAGGAATCCCGGAAATCTC+GGG | 0.526557 | 3.1:-6831039 | MS.gene56356:CDS |
| TGGGTGATGGAGGCTGCAAT+GGG | 0.529895 | 3.1:-6830797 | MS.gene56356:CDS |
| TTAATAAAGCATTGAAAGCA+GGG | 0.529926 | 3.1:-6830929 | MS.gene56356:CDS |
| GGTGGTGCAGTGGGTGATGG+AGG | 0.534826 | 3.1:-6830807 | MS.gene56356:CDS |
| TAATTCAAAACCGGCTGAAG+AGG | 0.535280 | 3.1:-6830853 | MS.gene56356:CDS |
| GAAGCTTTGTCTGAAAATGA+AGG | 0.536578 | 3.1:-6831686 | MS.gene56356:CDS |
| ATGTTGCAGCTGAGAAGGAC+CGG | 0.542009 | 3.1:-6831142 | MS.gene56356:CDS |
| ACTAAATGTTGCAGCTGAGA+AGG | 0.543890 | 3.1:-6831147 | MS.gene56356:CDS |
| TGAGGAGGAGTTTAAACAGT+GGG | 0.546108 | 3.1:-6831321 | MS.gene56356:CDS |
| TGAATGAACTGCGTGCTAAG+AGG | 0.547152 | 3.1:-6831859 | MS.gene56356:CDS |
| AGCACATCGCGAGCTGAAAG+AGG | 0.547212 | 3.1:-6831816 | MS.gene56356:CDS |
| GAGCGCAGGGAGTTCAGGCA+GGG | 0.549229 | 3.1:-6830614 | MS.gene56356:CDS |
| ATCCCGGAAATCTCGGGAGA+AGG | 0.549427 | 3.1:-6831033 | MS.gene56356:CDS |
| GAGGCTGAAACAGCGAGAGC+CGG | 0.553800 | 3.1:-6831840 | MS.gene56356:CDS |
| TTATACCAGCAGCCTCCAAA+AGG | 0.555238 | 3.1:+6832245 | None:intergenic |
| TGGTATGACGGCCACTGCCG+AGG | 0.559819 | 3.1:-6830766 | MS.gene56356:CDS |
| AAGTAGAGCGAAGTGGTGGC+CGG | 0.562543 | 3.1:-6831292 | MS.gene56356:CDS |
| GGTGATTACAAGAGAAGAAG+AGG | 0.564356 | 3.1:-6830501 | MS.gene56356:CDS |
| CATCTAGCCTCTTCAGCATC+CGG | 0.564400 | 3.1:+6831273 | None:intergenic |
| CATTTGCCACCTCGCAGCAG+AGG | 0.570644 | 3.1:+6831370 | None:intergenic |
| ACAAGAGCTCCAGTGGATGA+AGG | 0.572277 | 3.1:-6830705 | MS.gene56356:CDS |
| GTGGTGGCCGGATGCTGAAG+AGG | 0.573366 | 3.1:-6831280 | MS.gene56356:CDS |
| GACAGGTCAGCTGCTAAGGA+TGG | 0.574292 | 3.1:-6831887 | MS.gene56356:CDS |
| CAAAAGTTTGGTGGAGCGCA+GGG | 0.575970 | 3.1:-6830627 | MS.gene56356:CDS |
| GATGATGACAAGATAATGCC+TGG | 0.576356 | 3.1:-6831650 | MS.gene56356:CDS |
| GATAGCATCCAAGCGTGACA+AGG | 0.578775 | 3.1:-6831978 | MS.gene56356:CDS |
| GCAATGTGGCAAAAGTTTGG+TGG | 0.581264 | 3.1:-6830636 | MS.gene56356:CDS |
| ATCACACGAGAAGACGGAAG+AGG | 0.583932 | 3.1:+6831929 | None:intergenic |
| GCCATAGTGAAAGTGAAAGT+AGG | 0.587909 | 3.1:-6831730 | MS.gene56356:CDS |
| GCACATCGCGAGCTGAAAGA+GGG | 0.588648 | 3.1:-6831815 | MS.gene56356:CDS |
| TGTTTAAACTCCTCCTCAAG+CGG | 0.589955 | 3.1:+6831326 | None:intergenic |
| ATCTCGGGAGAAGGACGCCA+AGG | 0.590489 | 3.1:-6831024 | MS.gene56356:CDS |
| GGTCTAAAATTTCAGGATCA+GGG | 0.591143 | 3.1:-6831793 | MS.gene56356:CDS |
| AATACTTCTGGTGGTGCAGT+GGG | 0.597159 | 3.1:-6830816 | MS.gene56356:CDS |
| TAAAAGAAATCACCATTCCA+AGG | 0.599048 | 3.1:-6831601 | MS.gene56356:CDS |
| TGCGAGGTGGCAAATGGCCA+TGG | 0.599400 | 3.1:-6831363 | MS.gene56356:CDS |
| AGGAGTGATGAATCTGATGT+TGG | 0.600216 | 3.1:-6832121 | MS.gene56356:CDS |
| CATCTACTAGATCTTCTGAC+AGG | 0.600420 | 3.1:-6831904 | MS.gene56356:CDS |
| TGTTGGCGATGATCTTTACA+AGG | 0.605036 | 3.1:-6832104 | MS.gene56356:CDS |
| TGGGATTGGAGCTGGTATGA+CGG | 0.607971 | 3.1:-6830778 | MS.gene56356:CDS |
| GATGACATCACACGAGAAGA+CGG | 0.608285 | 3.1:+6831923 | None:intergenic |
| TTTAAACTCCTCCTCAAGCG+GGG | 0.608619 | 3.1:+6831328 | None:intergenic |
| AGCTTTGTCTGAAAATGAAG+GGG | 0.609152 | 3.1:-6831684 | MS.gene56356:CDS |
| GTCTAAAATTTCAGGATCAG+GGG | 0.613225 | 3.1:-6831792 | MS.gene56356:CDS |
| TAATACTTCTGGTGGTGCAG+TGG | 0.614229 | 3.1:-6830817 | MS.gene56356:CDS |
| GAGTCCCAGAAAACGATGGA+AGG | 0.614728 | 3.1:-6830548 | MS.gene56356:CDS |
| GGTAGACACAAGAGCTCCAG+TGG | 0.616107 | 3.1:-6830712 | MS.gene56356:CDS |
| AGAAGGACGCCAAGGCTCTG+AGG | 0.617944 | 3.1:-6831016 | MS.gene56356:CDS |
| ATAGCATCCAAGCGTGACAA+GGG | 0.619336 | 3.1:-6831977 | MS.gene56356:CDS |
| GCTGAAGAGGCTAGATGTGG+TGG | 0.622446 | 3.1:-6831267 | MS.gene56356:CDS |
| TCTAAAATTTCAGGATCAGG+GGG | 0.625310 | 3.1:-6831791 | MS.gene56356:CDS |
| TAAAGCATTGAAAGCAGGGG+AGG | 0.625312 | 3.1:-6830925 | MS.gene56356:CDS |
| GATGACTCTGATGATGATGA+TGG | 0.630460 | 3.1:-6832166 | MS.gene56356:CDS |
| CATCACTCCTGTCCACCTCA+CGG | 0.632979 | 3.1:+6832134 | None:intergenic |
| GTATTGGCAGGTCAAAGACT+GGG | 0.637870 | 3.1:-6831508 | MS.gene56356:CDS |
| CATCAGCTGACATTAACAGT+TGG | 0.642633 | 3.1:-6830522 | MS.gene56356:CDS |
| ACACGAGAAGACGGAAGAGG+CGG | 0.642902 | 3.1:+6831932 | None:intergenic |
| CACATCGCGAGCTGAAAGAG+GGG | 0.647083 | 3.1:-6831814 | MS.gene56356:CDS |
| ATGAGACCTCTGCTGCGAGG+TGG | 0.647938 | 3.1:-6831376 | MS.gene56356:CDS |
| AAGTAGGTCCCGTAGTGACG+AGG | 0.658216 | 3.1:-6831714 | MS.gene56356:CDS |
| TAATAAAGCATTGAAAGCAG+GGG | 0.659215 | 3.1:-6830928 | MS.gene56356:CDS |
| ATACAGTCGATTAGGATCCG+AGG | 0.660349 | 3.1:+6831448 | None:intergenic |
| GTGATTACAAGAGAAGAAGA+GGG | 0.663120 | 3.1:-6830500 | MS.gene56356:CDS |
| AAGGAAGTAGAGCGAAGTGG+TGG | 0.663190 | 3.1:-6831296 | MS.gene56356:CDS |
| TTAAACTCCTCCTCAAGCGG+GGG | 0.674132 | 3.1:+6831329 | None:intergenic |
| GTTAAGGAAGTAGAGCGAAG+TGG | 0.674298 | 3.1:-6831299 | MS.gene56356:CDS |
| TTCTAACATCTGCTTCACAG+TGG | 0.675939 | 3.1:+6831196 | None:intergenic |
| TGGTGGTTCTGACCGTGAGG+TGG | 0.679830 | 3.1:-6832146 | MS.gene56356:CDS |
| GACTCTGATGATGATGATGG+TGG | 0.686524 | 3.1:-6832163 | MS.gene56356:CDS |
| TTTCGAGTCCCAGAAAACGA+TGG | 0.687907 | 3.1:-6830552 | MS.gene56356:CDS |
| AAGTACTTGAATGTTGTCTG+GGG | 0.689030 | 3.1:-6831401 | MS.gene56356:CDS |
| TTGAGGAGGAGTTTAAACAG+TGG | 0.689149 | 3.1:-6831322 | MS.gene56356:CDS |
| TGCCAATATCGCTAGCAATG+TGG | 0.691084 | 3.1:-6830650 | MS.gene56356:CDS |
| GCTGGAAATAATACTTCTGG+TGG | 0.697224 | 3.1:-6830825 | MS.gene56356:CDS |
| GATGCTGAAGAGGCTAGATG+TGG | 0.716515 | 3.1:-6831270 | MS.gene56356:CDS |
| GAAATGAGACCTCTGCTGCG+AGG | 0.717415 | 3.1:-6831379 | MS.gene56356:CDS |
| TGATGGTGGTTCTGACCGTG+AGG | 0.756865 | 3.1:-6832149 | MS.gene56356:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATCAATTTTTTGATTC+CGG | - | chr3.1:6830560-6830579 | MS.gene56356:CDS | 15.0% |
| !!! | AAAAATTGATTTTTTGATGA+AGG | + | chr3.1:6830554-6830573 | None:intergenic | 15.0% |
| !! | AAAACTTACAAAATGGTTTA+TGG | - | chr3.1:6831180-6831199 | MS.gene56356:CDS | 20.0% |
| ! | GAACTACTATAATTCAAAAC+CGG | - | chr3.1:6831894-6831913 | MS.gene56356:CDS | 25.0% |
| ! | TCTAATTTATACAGTCGATT+AGG | + | chr3.1:6831319-6831338 | None:intergenic | 25.0% |
| !! | TGATTTAGAAAATGACCTTT+TGG | - | chr3.1:6830496-6830515 | MS.gene56356:CDS | 25.0% |
| !!! | AATTGATTTTTTGATGAAGG+TGG | + | chr3.1:6830551-6830570 | None:intergenic | 25.0% |
| !!! | ATTGATTTTTTGATGAAGGT+GGG | + | chr3.1:6830550-6830569 | None:intergenic | 25.0% |
| !!! | TTAATAAAGCATTGAAAGCA+GGG | - | chr3.1:6831827-6831846 | MS.gene56356:CDS | 25.0% |
| AAATTAGGTTTCCCTATTTG+CGG | + | chr3.1:6830995-6831014 | None:intergenic | 30.0% | |
| AACAATCAACTCCTCAAAAA+AGG | + | chr3.1:6831209-6831228 | None:intergenic | 30.0% | |
| AACATTCAAGTACTTGTATG+TGG | + | chr3.1:6831350-6831369 | None:intergenic | 30.0% | |
| AAGAGAAAAAATCTATCTCG+CGG | - | chr3.1:6831581-6831600 | MS.gene56356:CDS | 30.0% | |
| ACAATCAACTCCTCAAAAAA+GGG | + | chr3.1:6831208-6831227 | None:intergenic | 30.0% | |
| CAAGGTCAAAACTTACAAAA+TGG | - | chr3.1:6831173-6831192 | MS.gene56356:CDS | 30.0% | |
| TAAAAGAAATCACCATTCCA+AGG | - | chr3.1:6831155-6831174 | MS.gene56356:CDS | 30.0% | |
| ! | AAGCTTTGTCTGAAAATGAA+GGG | - | chr3.1:6831071-6831090 | MS.gene56356:CDS | 30.0% |
| ! | AGAGATGATTTTGTCTGATA+GGG | - | chr3.1:6830721-6830740 | MS.gene56356:CDS | 30.0% |
| ! | GCTTTCAATGCTTTATTAAC+TGG | + | chr3.1:6831826-6831845 | None:intergenic | 30.0% |
| ! | TTTAGAAAATGACCTTTTGG+AGG | - | chr3.1:6830499-6830518 | MS.gene56356:CDS | 30.0% |
| !! | CATTTTGTAAGTTTTGACCT+TGG | + | chr3.1:6831175-6831194 | None:intergenic | 30.0% |
| !! | GTTAATAAAGCATTGAAAGC+AGG | - | chr3.1:6831826-6831845 | MS.gene56356:CDS | 30.0% |
| !! | TAATAAAGCATTGAAAGCAG+GGG | - | chr3.1:6831828-6831847 | MS.gene56356:CDS | 30.0% |
| !!! | TTTTTTGAGGAGTTGATTGT+TGG | - | chr3.1:6831208-6831227 | MS.gene56356:CDS | 30.0% |
| AAGTACTTGAATGTTGTCTG+GGG | - | chr3.1:6831355-6831374 | MS.gene56356:CDS | 35.0% | |
| ACAAGTACTTGAATGTTGTC+TGG | - | chr3.1:6831353-6831372 | MS.gene56356:CDS | 35.0% | |
| ACCTACTTTCACTTTCACTA+TGG | + | chr3.1:6831030-6831049 | None:intergenic | 35.0% | |
| ATTTGAAAAGCCATCGTTTG+AGG | - | chr3.1:6831129-6831148 | MS.gene56356:CDS | 35.0% | |
| CAAGTACTTGAATGTTGTCT+GGG | - | chr3.1:6831354-6831373 | MS.gene56356:CDS | 35.0% | |
| CAGAGAATTGAAGAAGTTGT+TGG | - | chr3.1:6832180-6832199 | MS.gene56356:CDS | 35.0% | |
| GTGATTACAAGAGAAGAAGA+GGG | - | chr3.1:6832256-6832275 | MS.gene56356:CDS | 35.0% | |
| ! | AAAGAGGGGTCTAAAATTTC+AGG | - | chr3.1:6830956-6830975 | MS.gene56356:CDS | 35.0% |
| ! | AGCTTTGTCTGAAAATGAAG+GGG | - | chr3.1:6831072-6831091 | MS.gene56356:CDS | 35.0% |
| ! | GAAGCTTTGTCTGAAAATGA+AGG | - | chr3.1:6831070-6831089 | MS.gene56356:CDS | 35.0% |
| ! | GAGAGATGATTTTGTCTGAT+AGG | - | chr3.1:6830720-6830739 | MS.gene56356:CDS | 35.0% |
| ! | GATTGTTGGTTGTTTCGTTA+GGG | - | chr3.1:6831222-6831241 | MS.gene56356:CDS | 35.0% |
| ! | GGTCTAAAATTTCAGGATCA+GGG | - | chr3.1:6830963-6830982 | MS.gene56356:CDS | 35.0% |
| ! | GTCTAAAATTTCAGGATCAG+GGG | - | chr3.1:6830964-6830983 | MS.gene56356:CDS | 35.0% |
| ! | TCTAAAATTTCAGGATCAGG+GGG | - | chr3.1:6830965-6830984 | MS.gene56356:CDS | 35.0% |
| ! | TCTTTTATGTCCTCAAACGA+TGG | + | chr3.1:6831142-6831161 | None:intergenic | 35.0% |
| ! | TGATTGTTGGTTGTTTCGTT+AGG | - | chr3.1:6831221-6831240 | MS.gene56356:CDS | 35.0% |
| ! | TTTCCAATTCCCTTTTCAAC+CGG | + | chr3.1:6831636-6831655 | None:intergenic | 35.0% |
| !! | CAGGTTATGATCCTTTTTCA+AGG | - | chr3.1:6831854-6831873 | MS.gene56356:CDS | 35.0% |
| !! | TGTAAGTTTTGACCTTGGAA+TGG | + | chr3.1:6831170-6831189 | None:intergenic | 35.0% |
| !!! | ATGATCCTTTTTCAAGGAGA+TGG | - | chr3.1:6831860-6831879 | MS.gene56356:CDS | 35.0% |
| ACTAAATGTTGCAGCTGAGA+AGG | - | chr3.1:6831609-6831628 | MS.gene56356:CDS | 40.0% | |
| AGAAAAAATCTATCTCGCGG+AGG | - | chr3.1:6831584-6831603 | MS.gene56356:CDS | 40.0% | |
| AGGAGTGATGAATCTGATGT+TGG | - | chr3.1:6830635-6830654 | MS.gene56356:CDS | 40.0% | |
| CATCAGCTGACATTAACAGT+TGG | - | chr3.1:6832234-6832253 | MS.gene56356:CDS | 40.0% | |
| CATCTACTAGATCTTCTGAC+AGG | - | chr3.1:6830852-6830871 | MS.gene56356:CDS | 40.0% | |
| CCAGACAAAACTGCAAGAAT+TGG | - | chr3.1:6831696-6831715 | MS.gene56356:CDS | 40.0% | |
| CGATGATCTTTACAAGGATG+AGG | - | chr3.1:6830658-6830677 | MS.gene56356:CDS | 40.0% | |
| CTAGCAATGTGGCAAAAGTT+TGG | - | chr3.1:6832117-6832136 | MS.gene56356:CDS | 40.0% | |
| CTAGTCCATCTCCTTGAAAA+AGG | + | chr3.1:6831868-6831887 | None:intergenic | 40.0% | |
| CTGAGATGAACAGAAAGAAC+AGG | - | chr3.1:6831767-6831786 | MS.gene56356:CDS | 40.0% | |
| GACAAAACTGCAAGAATTGG+AGG | - | chr3.1:6831699-6831718 | MS.gene56356:CDS | 40.0% | |
| GATGATGACAAGATAATGCC+TGG | - | chr3.1:6831106-6831125 | MS.gene56356:CDS | 40.0% | |
| GCAGCTGGAAATAATACTTC+TGG | - | chr3.1:6831928-6831947 | MS.gene56356:CDS | 40.0% | |
| GCCATAGTGAAAGTGAAAGT+AGG | - | chr3.1:6831026-6831045 | MS.gene56356:CDS | 40.0% | |
| GCTGGAAATAATACTTCTGG+TGG | - | chr3.1:6831931-6831950 | MS.gene56356:CDS | 40.0% | |
| GGTGAAAAATGTTGATGCCT+CGG | - | chr3.1:6831291-6831310 | MS.gene56356:CDS | 40.0% | |
| GGTGATTACAAGAGAAGAAG+AGG | - | chr3.1:6832255-6832274 | MS.gene56356:CDS | 40.0% | |
| TAATTCAAAACCGGCTGAAG+AGG | - | chr3.1:6831903-6831922 | MS.gene56356:CDS | 40.0% | |
| TGAGGAGGAGTTTAAACAGT+GGG | - | chr3.1:6831435-6831454 | MS.gene56356:CDS | 40.0% | |
| TGGCTTGAGCTACTGAAATT+AGG | + | chr3.1:6831010-6831029 | None:intergenic | 40.0% | |
| TGTTGGCGATGATCTTTACA+AGG | - | chr3.1:6830652-6830671 | MS.gene56356:CDS | 40.0% | |
| TGTTTAAACTCCTCCTCAAG+CGG | + | chr3.1:6831433-6831452 | None:intergenic | 40.0% | |
| TTCTAACATCTGCTTCACAG+TGG | + | chr3.1:6831563-6831582 | None:intergenic | 40.0% | |
| TTCTCAGCTGCAACATTTAG+TGG | + | chr3.1:6831610-6831629 | None:intergenic | 40.0% | |
| TTGAGGAGGAGTTTAAACAG+TGG | - | chr3.1:6831434-6831453 | MS.gene56356:CDS | 40.0% | |
| ! | AACGATGGCTTTTCAAATCC+AGG | + | chr3.1:6831127-6831146 | None:intergenic | 40.0% |
| ! | GATGACTCTGATGATGATGA+TGG | - | chr3.1:6830590-6830609 | MS.gene56356:CDS | 40.0% |
| ! | GGGTCTAAAATTTCAGGATC+AGG | - | chr3.1:6830962-6830981 | MS.gene56356:CDS | 40.0% |
| !! | CCAATTCTTGCAGTTTTGTC+TGG | + | chr3.1:6831699-6831718 | None:intergenic | 40.0% |
| !! | GGAGTTTAAACAGTGGGTTA+AGG | - | chr3.1:6831441-6831460 | MS.gene56356:CDS | 40.0% |
| !! | TGTTTCGTTAGGGTTGGTAT+TGG | - | chr3.1:6831232-6831251 | MS.gene56356:CDS | 40.0% |
| !!! | GTTTATGGAGCCCTTTTTTG+AGG | - | chr3.1:6831195-6831214 | MS.gene56356:CDS | 40.0% |
| ACCATACAGAGCCTGTAGAT+AGG | + | chr3.1:6831274-6831293 | None:intergenic | 45.0% | |
| ATACAGTCGATTAGGATCCG+AGG | + | chr3.1:6831311-6831330 | None:intergenic | 45.0% | |
| ATAGCATCCAAGCGTGACAA+GGG | - | chr3.1:6830779-6830798 | MS.gene56356:CDS | 45.0% | |
| ATCAGAGTCATCATCGTCTC+CGG | + | chr3.1:6830582-6830601 | None:intergenic | 45.0% | |
| CTTCAACATCCTCGTCACTA+CGG | + | chr3.1:6831054-6831073 | None:intergenic | 45.0% | |
| GATGACATCACACGAGAAGA+CGG | + | chr3.1:6830836-6830855 | None:intergenic | 45.0% | |
| GCAATGTGGCAAAAGTTTGG+TGG | - | chr3.1:6832120-6832139 | MS.gene56356:CDS | 45.0% | |
| GTTAAGGAAGTAGAGCGAAG+TGG | - | chr3.1:6831457-6831476 | MS.gene56356:CDS | 45.0% | |
| GTTTAAACTCCTCCTCAAGC+GGG | + | chr3.1:6831432-6831451 | None:intergenic | 45.0% | |
| TACATTTCCCTTGTCACGCT+TGG | + | chr3.1:6830789-6830808 | None:intergenic | 45.0% | |
| TGAATGAACTGCGTGCTAAG+AGG | - | chr3.1:6830897-6830916 | MS.gene56356:CDS | 45.0% | |
| TGAGAAGGACCGGTTGAAAA+GGG | - | chr3.1:6831624-6831643 | MS.gene56356:CDS | 45.0% | |
| TGCAAGAATTGGAGGAATCC+CGG | - | chr3.1:6831707-6831726 | MS.gene56356:CDS | 45.0% | |
| TGCCAATATCGCTAGCAATG+TGG | - | chr3.1:6832106-6832125 | MS.gene56356:CDS | 45.0% | |
| TGCCACATTGCTAGCGATAT+TGG | + | chr3.1:6832111-6832130 | None:intergenic | 45.0% | |
| TTATACCAGCAGCCTCCAAA+AGG | + | chr3.1:6830514-6830533 | None:intergenic | 45.0% | |
| TTCAACATCCTCGTCACTAC+GGG | + | chr3.1:6831053-6831072 | None:intergenic | 45.0% | |
| TTTAAACTCCTCCTCAAGCG+GGG | + | chr3.1:6831431-6831450 | None:intergenic | 45.0% | |
| ! | AATACTTCTGGTGGTGCAGT+GGG | - | chr3.1:6831940-6831959 | MS.gene56356:CDS | 45.0% |
| ! | GACTCCTTCCATCGTTTTCT+GGG | + | chr3.1:6832215-6832234 | None:intergenic | 45.0% |
| ! | GTATTGGCAGGTCAAAGACT+GGG | - | chr3.1:6831248-6831267 | MS.gene56356:CDS | 45.0% |
| ! | GTTGGTTGTTTCGTTAGGGT+TGG | - | chr3.1:6831226-6831245 | MS.gene56356:CDS | 45.0% |
| ! | TAATACTTCTGGTGGTGCAG+TGG | - | chr3.1:6831939-6831958 | MS.gene56356:CDS | 45.0% |
| ! | TGACTCCTTCCATCGTTTTC+TGG | + | chr3.1:6832216-6832235 | None:intergenic | 45.0% |
| ! | TTTCGAGTCCCAGAAAACGA+TGG | - | chr3.1:6832204-6832223 | MS.gene56356:CDS | 45.0% |
| !! | CAAGGAGATGGACTAGATCA+AGG | - | chr3.1:6831872-6831891 | MS.gene56356:CDS | 45.0% |
| !! | GACTCTGATGATGATGATGG+TGG | - | chr3.1:6830593-6830612 | MS.gene56356:CDS | 45.0% |
| !! | TAAAGCATTGAAAGCAGGGG+AGG | - | chr3.1:6831831-6831850 | MS.gene56356:CDS | 45.0% |
| AAGGAAGTAGAGCGAAGTGG+TGG | - | chr3.1:6831460-6831479 | MS.gene56356:CDS | 50.0% | |
| ACAAGAGCTCCAGTGGATGA+AGG | - | chr3.1:6832051-6832070 | MS.gene56356:CDS | 50.0% | |
| ATCACACGAGAAGACGGAAG+AGG | + | chr3.1:6830830-6830849 | None:intergenic | 50.0% | |
| ATGTTGCAGCTGAGAAGGAC+CGG | - | chr3.1:6831614-6831633 | MS.gene56356:CDS | 50.0% | |
| CAAAGACTGGGCCTATCTAC+AGG | - | chr3.1:6831260-6831279 | MS.gene56356:CDS | 50.0% | |
| CATCTAGCCTCTTCAGCATC+CGG | + | chr3.1:6831486-6831505 | None:intergenic | 50.0% | |
| CTGAGAAGGACCGGTTGAAA+AGG | - | chr3.1:6831623-6831642 | MS.gene56356:CDS | 50.0% | |
| GAAAGCAAGAACGATGCAGC+TGG | - | chr3.1:6831661-6831680 | MS.gene56356:CDS | 50.0% | |
| GACTCTGTTCCTTCATCCAC+TGG | + | chr3.1:6832063-6832082 | None:intergenic | 50.0% | |
| GAGTCCCAGAAAACGATGGA+AGG | - | chr3.1:6832208-6832227 | MS.gene56356:CDS | 50.0% | |
| GATAGCATCCAAGCGTGACA+AGG | - | chr3.1:6830778-6830797 | MS.gene56356:CDS | 50.0% | |
| GATGCTGAAGAGGCTAGATG+TGG | - | chr3.1:6831486-6831505 | MS.gene56356:CDS | 50.0% | |
| GCCTATCTACAGGCTCTGTA+TGG | - | chr3.1:6831270-6831289 | MS.gene56356:CDS | 50.0% | |
| GGACCGGTTGAAAAGGGAAT+TGG | - | chr3.1:6831630-6831649 | MS.gene56356:CDS | 50.0% | |
| GTCACGCTTGGATGCTATCT+TGG | + | chr3.1:6830777-6830796 | None:intergenic | 50.0% | |
| GTCTGATAGGGCTGCTAAGA+AGG | - | chr3.1:6830733-6830752 | MS.gene56356:CDS | 50.0% | |
| TGGAGGAATCCCGGAAATCT+CGG | - | chr3.1:6831716-6831735 | MS.gene56356:CDS | 50.0% | |
| TGGGATTGGAGCTGGTATGA+CGG | - | chr3.1:6831978-6831997 | MS.gene56356:CDS | 50.0% | |
| TTAAACTCCTCCTCAAGCGG+GGG | + | chr3.1:6831430-6831449 | None:intergenic | 50.0% | |
| TTCTGACAGGTCAGCTGCTA+AGG | - | chr3.1:6830865-6830884 | MS.gene56356:CDS | 50.0% | |
| ! | CAAAAGTTTGGTGGAGCGCA+GGG | - | chr3.1:6832129-6832148 | MS.gene56356:CDS | 50.0% |
| ! | CAGGGGGTTTTCCGCAAATA+GGG | - | chr3.1:6830981-6831000 | MS.gene56356:CDS | 50.0% |
| ! | TCAGGGGGTTTTCCGCAAAT+AGG | - | chr3.1:6830980-6830999 | MS.gene56356:CDS | 50.0% |
| !! | AATGACCTTTTGGAGGCTGC+TGG | - | chr3.1:6830506-6830525 | MS.gene56356:CDS | 50.0% |
| !! | GGTATTGGCAGGTCAAAGAC+TGG | - | chr3.1:6831247-6831266 | MS.gene56356:CDS | 50.0% |
| !! | TCGTTAGGGTTGGTATTGGC+AGG | - | chr3.1:6831236-6831255 | MS.gene56356:CDS | 50.0% |
| AAGTAGAGCGAAGTGGTGGC+CGG | - | chr3.1:6831464-6831483 | MS.gene56356:CDS | 55.0% | |
| AAGTAGGTCCCGTAGTGACG+AGG | - | chr3.1:6831042-6831061 | MS.gene56356:CDS | 55.0% | |
| ACACGAGAAGACGGAAGAGG+CGG | + | chr3.1:6830827-6830846 | None:intergenic | 55.0% | |
| AGCACATCGCGAGCTGAAAG+AGG | - | chr3.1:6830940-6830959 | MS.gene56356:CDS | 55.0% | |
| AGCAGCAGCTTCCAAAGCCT+CGG | + | chr3.1:6832010-6832029 | None:intergenic | 55.0% | |
| ATCCCGGAAATCTCGGGAGA+AGG | - | chr3.1:6831723-6831742 | MS.gene56356:CDS | 55.0% | |
| CACATCGCGAGCTGAAAGAG+GGG | - | chr3.1:6830942-6830961 | MS.gene56356:CDS | 55.0% | |
| CATCACTCCTGTCCACCTCA+CGG | + | chr3.1:6830625-6830644 | None:intergenic | 55.0% | |
| CGTCCTTCTCCCGAGATTTC+CGG | + | chr3.1:6831729-6831748 | None:intergenic | 55.0% | |
| CTCAGAAAGCCTCAGAGCCT+TGG | + | chr3.1:6831752-6831771 | None:intergenic | 55.0% | |
| GAAATGAGACCTCTGCTGCG+AGG | - | chr3.1:6831377-6831396 | MS.gene56356:CDS | 55.0% | |
| GACAGGTCAGCTGCTAAGGA+TGG | - | chr3.1:6830869-6830888 | MS.gene56356:CDS | 55.0% | |
| GATGGAGGCTGCAATGGGAT+TGG | - | chr3.1:6831964-6831983 | MS.gene56356:CDS | 55.0% | |
| GCACATCGCGAGCTGAAAGA+GGG | - | chr3.1:6830941-6830960 | MS.gene56356:CDS | 55.0% | |
| GCTGAAGAGGCTAGATGTGG+TGG | - | chr3.1:6831489-6831508 | MS.gene56356:CDS | 55.0% | |
| GGAGGAATCCCGGAAATCTC+GGG | - | chr3.1:6831717-6831736 | MS.gene56356:CDS | 55.0% | |
| GGGAGTTCAGGCAGGGTTTA+TGG | - | chr3.1:6832149-6832168 | MS.gene56356:CDS | 55.0% | |
| GGTAGACACAAGAGCTCCAG+TGG | - | chr3.1:6832044-6832063 | MS.gene56356:CDS | 55.0% | |
| GTCCTTCTCCCGAGATTTCC+GGG | + | chr3.1:6831728-6831747 | None:intergenic | 55.0% | |
| TTCAGCTCGCGATGTGCTTC+CGG | + | chr3.1:6830938-6830957 | None:intergenic | 55.0% | |
| ! | GCAAAAGTTTGGTGGAGCGC+AGG | - | chr3.1:6832128-6832147 | MS.gene56356:CDS | 55.0% |
| ! | TGCTGCTGGTGCTGGAAAGT+TGG | - | chr3.1:6832023-6832042 | MS.gene56356:CDS | 55.0% |
| !! | TGATGGTGGTTCTGACCGTG+AGG | - | chr3.1:6830607-6830626 | MS.gene56356:CDS | 55.0% |
| !! | TGGGTGATGGAGGCTGCAAT+GGG | - | chr3.1:6831959-6831978 | MS.gene56356:CDS | 55.0% |
| AGAAGGACGCCAAGGCTCTG+AGG | - | chr3.1:6831740-6831759 | MS.gene56356:CDS | 60.0% | |
| AGCTTCCAAAGCCTCGGCAG+TGG | + | chr3.1:6832004-6832023 | None:intergenic | 60.0% | |
| ATCTCGGGAGAAGGACGCCA+AGG | - | chr3.1:6831732-6831751 | MS.gene56356:CDS | 60.0% | |
| ATGAGACCTCTGCTGCGAGG+TGG | - | chr3.1:6831380-6831399 | MS.gene56356:CDS | 60.0% | |
| CATTTGCCACCTCGCAGCAG+AGG | + | chr3.1:6831389-6831408 | None:intergenic | 60.0% | |
| CGGGGGAGAATCGCTAACCA+TGG | + | chr3.1:6831413-6831432 | None:intergenic | 60.0% | |
| CTCTGCTGCGAGGTGGCAAA+TGG | - | chr3.1:6831387-6831406 | MS.gene56356:CDS | 60.0% | |
| GAGGCTGAAACAGCGAGAGC+CGG | - | chr3.1:6830916-6830935 | MS.gene56356:CDS | 60.0% | |
| GCATTGAAAGCAGGGGAGGC+AGG | - | chr3.1:6831835-6831854 | MS.gene56356:CDS | 60.0% | |
| GGCTGCAATGGGATTGGAGC+TGG | - | chr3.1:6831970-6831989 | MS.gene56356:CDS | 60.0% | |
| GTTCTGACCGTGAGGTGGAC+AGG | - | chr3.1:6830615-6830634 | MS.gene56356:CDS | 60.0% | |
| TAGCGATTCTCCCCCGCTTG+AGG | - | chr3.1:6831417-6831436 | MS.gene56356:CDS | 60.0% | |
| TGCGAGGTGGCAAATGGCCA+TGG | - | chr3.1:6831393-6831412 | MS.gene56356:CDS | 60.0% | |
| TTGGAAGCTGCTGCTGGTGC+TGG | - | chr3.1:6832015-6832034 | MS.gene56356:CDS | 60.0% | |
| ! | TCTGGTGGTGCAGTGGGTGA+TGG | - | chr3.1:6831946-6831965 | MS.gene56356:CDS | 60.0% |
| !! | GAGGCTTTGGAAGCTGCTGC+TGG | - | chr3.1:6832009-6832028 | MS.gene56356:CDS | 60.0% |
| !! | GTGGGTGATGGAGGCTGCAA+TGG | - | chr3.1:6831958-6831977 | MS.gene56356:CDS | 60.0% |
| !! | TGGTGGTTCTGACCGTGAGG+TGG | - | chr3.1:6830610-6830629 | MS.gene56356:CDS | 60.0% |
| CCAGCTGCAGCCTCTTCAGC+CGG | + | chr3.1:6831916-6831935 | None:intergenic | 65.0% | |
| CGATTCTCCCCCGCTTGAGG+AGG | - | chr3.1:6831420-6831439 | MS.gene56356:CDS | 65.0% | |
| GAGCGCAGGGAGTTCAGGCA+GGG | - | chr3.1:6832142-6832161 | MS.gene56356:CDS | 65.0% | |
| GTGGTGGCCGGATGCTGAAG+AGG | - | chr3.1:6831476-6831495 | MS.gene56356:CDS | 65.0% | |
| TGGTATGACGGCCACTGCCG+AGG | - | chr3.1:6831990-6832009 | MS.gene56356:CDS | 65.0% | |
| TGGTGGAGCGCAGGGAGTTC+AGG | - | chr3.1:6832137-6832156 | MS.gene56356:CDS | 65.0% | |
| ! | GGTGGTGCAGTGGGTGATGG+AGG | - | chr3.1:6831949-6831968 | MS.gene56356:CDS | 65.0% |
| CCGGCTGAAGAGGCTGCAGC+TGG | - | chr3.1:6831913-6831932 | MS.gene56356:CDS | 70.0% | |
| GACGGCCACTGCCGAGGCTT+TGG | - | chr3.1:6831996-6832015 | MS.gene56356:CDS | 70.0% | |
| GGAGCGCAGGGAGTTCAGGC+AGG | - | chr3.1:6832141-6832160 | MS.gene56356:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 6830491 | 6832287 | 6830491 | ID=MS.gene56356 |
| chr3.1 | mRNA | 6830491 | 6832287 | 6830491 | ID=MS.gene56356.t1;Parent=MS.gene56356 |
| chr3.1 | exon | 6830491 | 6832287 | 6830491 | ID=MS.gene56356.t1.exon1;Parent=MS.gene56356.t1 |
| chr3.1 | CDS | 6830491 | 6832287 | 6830491 | ID=cds.MS.gene56356.t1;Parent=MS.gene56356.t1 |
| Gene Sequence |
| Protein sequence |
