Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene56889 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene56889 | 0.801952 | 7.06E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene56889 | 0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene56889 | -0.810161 | 1.32E-50 | -1.69E-46 |
| MS.gene052447 | MS.gene56889 | 0.869951 | 2.11E-66 | -1.69E-46 |
| MS.gene054124 | MS.gene56889 | 0.814642 | 1.39E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene56889 | 0.817208 | 3.72E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene56889 | 0.826533 | 2.58E-54 | -1.69E-46 |
| MS.gene058294 | MS.gene56889 | 0.8035 | 3.38E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene56889 | 0.805137 | 1.54E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene56889 | 0.808608 | 2.85E-50 | -1.69E-46 |
| MS.gene060134 | MS.gene56889 | 0.810624 | 1.05E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene56889 | -0.822004 | 2.99E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAGTATGATTGTGGTTT+TGG | 0.244421 | 8.1:-17879689 | MS.gene56889:CDS |
| GGTGATGAGTACGTGGTTCA+TGG | 0.355563 | 8.1:-17879665 | MS.gene56889:CDS |
| CGGGGTCGTCGGTACGGGTT+AGG | 0.359630 | 8.1:-17879409 | None:intergenic |
| TACCGGTTCCTGTCCAGTTT+GGG | 0.361643 | 8.1:-17880153 | MS.gene56889:intron |
| GACAGGAACCGGTAACAAAA+AGG | 0.394054 | 8.1:+17880162 | None:intergenic |
| AGATCGGAGCTCACCCAAAC+TGG | 0.397582 | 8.1:+17880140 | None:intergenic |
| TTACCGGTTCCTGTCCAGTT+TGG | 0.418942 | 8.1:-17880154 | MS.gene56889:CDS |
| AGTGGACTGTAGGTGGGGAC+GGG | 0.421001 | 8.1:-17879428 | MS.gene56889:CDS |
| TGGGGACGGGGTCGTCGGTA+CGG | 0.424633 | 8.1:-17879415 | MS.gene56889:CDS |
| CACCCAAACTGGACAGGAAC+CGG | 0.426656 | 8.1:+17880151 | None:intergenic |
| GGGGACGGGGTCGTCGGTAC+GGG | 0.443102 | 8.1:-17879414 | MS.gene56889:CDS |
| GTGATGAGTACGTGGTTCAT+GGG | 0.446444 | 8.1:-17879664 | MS.gene56889:CDS |
| TGGTTCAAGTGGACTGTAGG+TGG | 0.463835 | 8.1:-17879435 | MS.gene56889:CDS |
| GCTGCAGGTGTCGGTGTTAG+TGG | 0.465645 | 8.1:-17879459 | MS.gene56889:intron |
| CAGCAGTTTGGCACCGTAGT+TGG | 0.469146 | 8.1:-17879876 | MS.gene56889:CDS |
| CAGTTTGGCACCGTAGTTGG+TGG | 0.475887 | 8.1:-17879873 | MS.gene56889:CDS |
| GGTTCAAGTGGACTGTAGGT+GGG | 0.480021 | 8.1:-17879434 | MS.gene56889:CDS |
| CTGCAGGTGTCGGTGTTAGT+GGG | 0.483112 | 8.1:-17879458 | MS.gene56889:intron |
| GTGGACTGTAGGTGGGGACG+GGG | 0.485407 | 8.1:-17879427 | MS.gene56889:CDS |
| AAGTGGACTGTAGGTGGGGA+CGG | 0.488168 | 8.1:-17879429 | MS.gene56889:CDS |
| CCATACCATCACCTCGAAAC+CGG | 0.489761 | 8.1:+17879609 | None:intergenic |
| ATCTGTCAGATCCGGTTTCG+AGG | 0.507430 | 8.1:-17879620 | MS.gene56889:CDS |
| CAGATCCGGTTTCGAGGTGA+TGG | 0.509521 | 8.1:-17879614 | MS.gene56889:intron |
| CCACAATCATACTTCAATGA+AGG | 0.513975 | 8.1:+17879695 | None:intergenic |
| GGGTGGTTCAAGTGGACTGT+AGG | 0.519856 | 8.1:-17879438 | MS.gene56889:CDS |
| GTGGTGGAGAGGCAGCAGTT+TGG | 0.527745 | 8.1:-17879888 | MS.gene56889:intron |
| CAGAGCAGCACAAGGAGGAA+AGG | 0.532705 | 8.1:+17880192 | None:intergenic |
| CCTTCATTGAAGTATGATTG+TGG | 0.538191 | 8.1:-17879695 | MS.gene56889:CDS |
| GGAGCTCACCCAAACTGGAC+AGG | 0.543458 | 8.1:+17880145 | None:intergenic |
| TGATGAGTACGTGGTTCATG+GGG | 0.544592 | 8.1:-17879663 | MS.gene56889:CDS |
| ATGAGTACGTGGTTCATGGG+GGG | 0.545126 | 8.1:-17879661 | MS.gene56889:CDS |
| TGAGTACGTGGTTCATGGGG+GGG | 0.562093 | 8.1:-17879660 | MS.gene56889:CDS |
| AGGACGGTGGTGCGGAGACG+AGG | 0.566288 | 8.1:+17880212 | None:intergenic |
| GTAGGTGGGGACGGGGTCGT+CGG | 0.567513 | 8.1:-17879420 | MS.gene56889:CDS |
| GGTGGTGGATCTGTCAGATC+CGG | 0.568399 | 8.1:-17879628 | MS.gene56889:CDS |
| GTGTTAGTGGGTGGTTCAAG+TGG | 0.579416 | 8.1:-17879446 | MS.gene56889:CDS |
| GTTCAAGTGGACTGTAGGTG+GGG | 0.581127 | 8.1:-17879433 | MS.gene56889:CDS |
| ACTTGTTGACCCACCAACTA+CGG | 0.581688 | 8.1:+17879863 | None:intergenic |
| AGTTTGGCACCGTAGTTGGT+GGG | 0.587976 | 8.1:-17879872 | MS.gene56889:CDS |
| GCAGCACAAGGAGGAAAGGA+CGG | 0.600228 | 8.1:+17880196 | None:intergenic |
| AGGAGGAAAGGACGGTGGTG+CGG | 0.617471 | 8.1:+17880204 | None:intergenic |
| GATGAGTACGTGGTTCATGG+GGG | 0.620865 | 8.1:-17879662 | MS.gene56889:CDS |
| GACGTGAACAGAGCAGCACA+AGG | 0.626137 | 8.1:+17880184 | None:intergenic |
| GAGTGACGTGAAACAAAGCA+AGG | 0.670606 | 8.1:+17879826 | None:intergenic |
| CAGGTGTCGGTGTTAGTGGG+TGG | 0.691929 | 8.1:-17879455 | MS.gene56889:CDS |
| GCACAAGGAGGAAAGGACGG+TGG | 0.700462 | 8.1:+17880199 | None:intergenic |
| GTGAACAGAGCAGCACAAGG+AGG | 0.744883 | 8.1:+17880187 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTGAAGTATGATTGTGGTTT+TGG | - | chr8.1:17879939-17879958 | MS.gene56889:intron | 30.0% |
| AACGAAAAACAACCATGGTT+CGG | + | chr8.1:17879836-17879855 | None:intergenic | 35.0% | |
| CCACAATCATACTTCAATGA+AGG | + | chr8.1:17879936-17879955 | None:intergenic | 35.0% | |
| CCTTCATTGAAGTATGATTG+TGG | - | chr8.1:17879933-17879952 | MS.gene56889:intron | 35.0% | |
| GTAGGAAAAAGATTCACACA+CGG | + | chr8.1:17880148-17880167 | None:intergenic | 35.0% | |
| TCGATAATGATTCTCCTGAT+GGG | - | chr8.1:17879875-17879894 | MS.gene56889:CDS | 35.0% | |
| TTCGATAATGATTCTCCTGA+TGG | - | chr8.1:17879874-17879893 | MS.gene56889:CDS | 35.0% | |
| ! | GTGTGTGAATCTTTTTCCTA+CGG | - | chr8.1:17880147-17880166 | MS.gene56889:intron | 35.0% |
| !! | TTTTCAACTGGTTTACGTTG+AGG | - | chr8.1:17879899-17879918 | MS.gene56889:intron | 35.0% |
| !!! | AAGTATGATTGTGGTTTTGG+TGG | - | chr8.1:17879942-17879961 | MS.gene56889:intron | 35.0% |
| !!! | TTCGGTTTTATTGTCAGTTG+TGG | - | chr8.1:17879669-17879688 | MS.gene56889:CDS | 35.0% |
| AACCAGTTGAAAAACCCATC+AGG | + | chr8.1:17879892-17879911 | None:intergenic | 40.0% | |
| AGATCTACTTGGATGAGGTA+AGG | - | chr8.1:17879515-17879534 | MS.gene56889:intron | 40.0% | |
| CCAAGTAGATCTGAAGAGAT+CGG | + | chr8.1:17879507-17879526 | None:intergenic | 40.0% | |
| GATCTGTCAAAGGATTCGTT+TGG | - | chr8.1:17879599-17879618 | MS.gene56889:intron | 40.0% | |
| TCTTCAGATCTACTTGGATG+AGG | - | chr8.1:17879510-17879529 | MS.gene56889:intron | 40.0% | |
| ! | GTTCACGTCCTTTTTGTTAC+CGG | - | chr8.1:17879458-17879477 | MS.gene56889:intron | 40.0% |
| ! | TTTTTCGTTGAGGGTCTGAA+TGG | - | chr8.1:17879847-17879866 | MS.gene56889:CDS | 40.0% |
| !!! | ACCATGGTTGTTTTTCGTTG+AGG | - | chr8.1:17879837-17879856 | MS.gene56889:CDS | 40.0% |
| !!! | CCATGGTTGTTTTTCGTTGA+GGG | - | chr8.1:17879838-17879857 | MS.gene56889:CDS | 40.0% |
| !!! | GGTTTTATTGTCAGTTGTGG+TGG | - | chr8.1:17879672-17879691 | MS.gene56889:CDS | 40.0% |
| CCCTCAACGAAAAACAACCA+TGG | + | chr8.1:17879841-17879860 | None:intergenic | 45.0% | |
| CCGATCTCTTCAGATCTACT+TGG | - | chr8.1:17879504-17879523 | MS.gene56889:intron | 45.0% | |
| CTGTCAAAGGATTCGTTTGG+TGG | - | chr8.1:17879602-17879621 | MS.gene56889:intron | 45.0% | |
| GACAGGAACCGGTAACAAAA+AGG | + | chr8.1:17879469-17879488 | None:intergenic | 45.0% | |
| GAGTGACGTGAAACAAAGCA+AGG | + | chr8.1:17879805-17879824 | None:intergenic | 45.0% | |
| GTGATGAGTACGTGGTTCAT+GGG | - | chr8.1:17879964-17879983 | MS.gene56889:intron | 45.0% | |
| TCTACTTGGATGAGGTAAGG+TGG | - | chr8.1:17879518-17879537 | MS.gene56889:intron | 45.0% | |
| TGATGAGTACGTGGTTCATG+GGG | - | chr8.1:17879965-17879984 | MS.gene56889:intron | 45.0% | |
| ! | AATCTTTTTCCTACGGCTGC+AGG | - | chr8.1:17880154-17880173 | MS.gene56889:CDS | 45.0% |
| ! | ACTTGTTGACCCACCAACTA+CGG | + | chr8.1:17879768-17879787 | None:intergenic | 45.0% |
| ! | GAAAAACAACCATGGTTCGG+TGG | + | chr8.1:17879833-17879852 | None:intergenic | 45.0% |
| ! | TCAACTGGTTTACGTTGAGG+TGG | - | chr8.1:17879902-17879921 | MS.gene56889:intron | 45.0% |
| !! | GTGACGTTTTGGTGGTTTTG+TGG | - | chr8.1:17879694-17879713 | MS.gene56889:CDS | 45.0% |
| !! | TATGGTGGTGGATCTGTCAA+AGG | - | chr8.1:17879589-17879608 | MS.gene56889:intron | 45.0% |
| !!! | ACGTTTTGGTGGTTTTGTGG+TGG | - | chr8.1:17879697-17879716 | MS.gene56889:CDS | 45.0% |
| !!! | CTCCTGATGGGTTTTTCAAC+TGG | - | chr8.1:17879887-17879906 | MS.gene56889:intron | 45.0% |
| !!! | GTTTTGTGGTGGTGGTGAAT+GGG | - | chr8.1:17879708-17879727 | MS.gene56889:CDS | 45.0% |
| !!! | TTTTGGTGGTGATGAGTACG+TGG | - | chr8.1:17879956-17879975 | MS.gene56889:intron | 45.0% |
| !!! | TTTTGGTGGTTTTGTGGTGG+TGG | - | chr8.1:17879700-17879719 | MS.gene56889:CDS | 45.0% |
| ACTTGGATGAGGTAAGGTGG+TGG | - | chr8.1:17879521-17879540 | MS.gene56889:intron | 50.0% | |
| AGTTTGGCACCGTAGTTGGT+GGG | - | chr8.1:17879756-17879775 | MS.gene56889:intron | 50.0% | |
| ATCTGTCAGATCCGGTTTCG+AGG | - | chr8.1:17880008-17880027 | MS.gene56889:intron | 50.0% | |
| ATGAGTACGTGGTTCATGGG+GGG | - | chr8.1:17879967-17879986 | MS.gene56889:intron | 50.0% | |
| CCATACCATCACCTCGAAAC+CGG | + | chr8.1:17880022-17880041 | None:intergenic | 50.0% | |
| GATGAGTACGTGGTTCATGG+GGG | - | chr8.1:17879966-17879985 | MS.gene56889:intron | 50.0% | |
| GGTGATGAGTACGTGGTTCA+TGG | - | chr8.1:17879963-17879982 | MS.gene56889:intron | 50.0% | |
| TTCGTTGAGGGTCTGAATGG+AGG | - | chr8.1:17879850-17879869 | MS.gene56889:CDS | 50.0% | |
| ! | ACTGGTTTACGTTGAGGTGG+TGG | - | chr8.1:17879905-17879924 | MS.gene56889:intron | 50.0% |
| ! | AGGTGATGGTATGGTGGTGA+TGG | - | chr8.1:17880028-17880047 | MS.gene56889:intron | 50.0% |
| ! | ATTGGTGTCCAGGTTGTGTG+AGG | - | chr8.1:17879561-17879580 | MS.gene56889:intron | 50.0% |
| ! | GTGTTAGTGGGTGGTTCAAG+TGG | - | chr8.1:17880182-17880201 | MS.gene56889:CDS | 50.0% |
| ! | GTTTCGAGGTGATGGTATGG+TGG | - | chr8.1:17880022-17880041 | MS.gene56889:intron | 50.0% |
| ! | TCGTTTGGTGGTCTCTTGTG+AGG | - | chr8.1:17879614-17879633 | MS.gene56889:intron | 50.0% |
| ! | TTTGGTGGTCTCTTGTGAGG+TGG | - | chr8.1:17879617-17879636 | MS.gene56889:CDS | 50.0% |
| !! | AGACATGTGGTGGTGGTTGT+TGG | - | chr8.1:17879646-17879665 | MS.gene56889:CDS | 50.0% |
| !! | CAGTTGTGGTGGTGACGTTT+TGG | - | chr8.1:17879683-17879702 | MS.gene56889:CDS | 50.0% |
| !! | GGTTCAAGTGGACTGTAGGT+GGG | - | chr8.1:17880194-17880213 | MS.gene56889:CDS | 50.0% |
| !! | GTTCAAGTGGACTGTAGGTG+GGG | - | chr8.1:17880195-17880214 | MS.gene56889:CDS | 50.0% |
| !! | TACCGGTTCCTGTCCAGTTT+GGG | - | chr8.1:17879475-17879494 | MS.gene56889:intron | 50.0% |
| !! | TGGTTCAAGTGGACTGTAGG+TGG | - | chr8.1:17880193-17880212 | MS.gene56889:CDS | 50.0% |
| !! | TGTGGTGGTGGTTGTTGGTT+CGG | - | chr8.1:17879651-17879670 | MS.gene56889:CDS | 50.0% |
| !! | TTACCGGTTCCTGTCCAGTT+TGG | - | chr8.1:17879474-17879493 | MS.gene56889:intron | 50.0% |
| !! | TTGTGGTGGTGACGTTTTGG+TGG | - | chr8.1:17879686-17879705 | MS.gene56889:CDS | 50.0% |
| !!! | GCGGTTTTGATGGTGAGGAT+TGG | - | chr8.1:17879543-17879562 | MS.gene56889:intron | 50.0% |
| !!! | GGTTTTGTGGTGGTGGTGAA+TGG | - | chr8.1:17879707-17879726 | MS.gene56889:CDS | 50.0% |
| !!! | TAAGGTGGTGGCGGTTTTGA+TGG | - | chr8.1:17879533-17879552 | MS.gene56889:intron | 50.0% |
| ACTCCTCATCCACCGAACCA+TGG | - | chr8.1:17879821-17879840 | MS.gene56889:intron | 55.0% | |
| AGATCGGAGCTCACCCAAAC+TGG | + | chr8.1:17879491-17879510 | None:intergenic | 55.0% | |
| CACCCAAACTGGACAGGAAC+CGG | + | chr8.1:17879480-17879499 | None:intergenic | 55.0% | |
| CAGAGCAGCACAAGGAGGAA+AGG | + | chr8.1:17879439-17879458 | None:intergenic | 55.0% | |
| CAGATCCGGTTTCGAGGTGA+TGG | - | chr8.1:17880014-17880033 | MS.gene56889:intron | 55.0% | |
| CAGCAGTTTGGCACCGTAGT+TGG | - | chr8.1:17879752-17879771 | MS.gene56889:intron | 55.0% | |
| CAGTTTGGCACCGTAGTTGG+TGG | - | chr8.1:17879755-17879774 | MS.gene56889:intron | 55.0% | |
| GACAGATCCACCACCATAGC+CGG | + | chr8.1:17879587-17879606 | None:intergenic | 55.0% | |
| GACGTGAACAGAGCAGCACA+AGG | + | chr8.1:17879447-17879466 | None:intergenic | 55.0% | |
| GCAGCACAAGGAGGAAAGGA+CGG | + | chr8.1:17879435-17879454 | None:intergenic | 55.0% | |
| GTGAACAGAGCAGCACAAGG+AGG | + | chr8.1:17879444-17879463 | None:intergenic | 55.0% | |
| TGAGTACGTGGTTCATGGGG+GGG | - | chr8.1:17879968-17879987 | MS.gene56889:intron | 55.0% | |
| TTTCCTACGGCTGCAGGTGT+CGG | - | chr8.1:17880160-17880179 | MS.gene56889:CDS | 55.0% | |
| ! | CCGGTTTCGAGGTGATGGTA+TGG | - | chr8.1:17880019-17880038 | MS.gene56889:intron | 55.0% |
| ! | GATGGTGAGGATTGGTGTCC+AGG | - | chr8.1:17879551-17879570 | MS.gene56889:intron | 55.0% |
| ! | TGGATGAGGTAAGGTGGTGG+CGG | - | chr8.1:17879524-17879543 | MS.gene56889:intron | 55.0% |
| !! | AAGTGGACTGTAGGTGGGGA+CGG | - | chr8.1:17880199-17880218 | MS.gene56889:CDS | 55.0% |
| !! | CAACCATGGTTCGGTGGATG+AGG | + | chr8.1:17879827-17879846 | None:intergenic | 55.0% |
| !! | CTGCAGGTGTCGGTGTTAGT+GGG | - | chr8.1:17880170-17880189 | MS.gene56889:CDS | 55.0% |
| !! | GGGTGGTTCAAGTGGACTGT+AGG | - | chr8.1:17880190-17880209 | MS.gene56889:CDS | 55.0% |
| !! | GGTGATGGTGTTGTGTGCGA+TGG | - | chr8.1:17880043-17880062 | MS.gene56889:intron | 55.0% |
| !! | GGTGGTGGATCTGTCAGATC+CGG | - | chr8.1:17880000-17880019 | MS.gene56889:intron | 55.0% |
| !! | GTTGTGGTGGTGGTGATGTG+TGG | - | chr8.1:17880077-17880096 | MS.gene56889:intron | 55.0% |
| !! | TTGTGGTGGTGGTGAATGGG+TGG | - | chr8.1:17879711-17879730 | MS.gene56889:intron | 55.0% |
| !!! | TGGTGGCGGTTTTGATGGTG+AGG | - | chr8.1:17879538-17879557 | MS.gene56889:intron | 55.0% |
| AGGAGGAAAGGACGGTGGTG+CGG | + | chr8.1:17879427-17879446 | None:intergenic | 60.0% | |
| AGGTTGTGTGAGGCCGGCTA+TGG | - | chr8.1:17879571-17879590 | MS.gene56889:intron | 60.0% | |
| ATAGCCGGCCTCACACAACC+TGG | + | chr8.1:17879572-17879591 | None:intergenic | 60.0% | |
| GCACAAGGAGGAAAGGACGG+TGG | + | chr8.1:17879432-17879451 | None:intergenic | 60.0% | |
| GGAGCTCACCCAAACTGGAC+AGG | + | chr8.1:17879486-17879505 | None:intergenic | 60.0% | |
| GGTGGTCTCTTGTGAGGTGG+TGG | - | chr8.1:17879620-17879639 | MS.gene56889:CDS | 60.0% | |
| GTGTCCAGGTTGTGTGAGGC+CGG | - | chr8.1:17879565-17879584 | MS.gene56889:intron | 60.0% | |
| TTGTGTGAGGCCGGCTATGG+TGG | - | chr8.1:17879574-17879593 | MS.gene56889:intron | 60.0% | |
| ! | GGTCTCTTGTGAGGTGGTGG+TGG | - | chr8.1:17879623-17879642 | MS.gene56889:CDS | 60.0% |
| ! | GGTGAATGGGTGGTGGTTGG+TGG | - | chr8.1:17879721-17879740 | MS.gene56889:intron | 60.0% |
| ! | GGTGGTGAATGGGTGGTGGT+TGG | - | chr8.1:17879718-17879737 | MS.gene56889:intron | 60.0% |
| ! | GTGGTGGAGACATGTGGTGG+TGG | - | chr8.1:17879639-17879658 | MS.gene56889:CDS | 60.0% |
| ! | GTGGTGGAGAGGCAGCAGTT+TGG | - | chr8.1:17879740-17879759 | MS.gene56889:intron | 60.0% |
| ! | GTGGTGGTGATGTGTGGTGG+TGG | - | chr8.1:17880083-17880102 | MS.gene56889:intron | 60.0% |
| !! | AGTGGACTGTAGGTGGGGAC+GGG | - | chr8.1:17880200-17880219 | MS.gene56889:CDS | 60.0% |
| !! | ATGTGTGGTGGTGGTGGTGG+TGG | - | chr8.1:17880092-17880111 | MS.gene56889:intron | 60.0% |
| !! | CAGGTGTCGGTGTTAGTGGG+TGG | - | chr8.1:17880173-17880192 | MS.gene56889:CDS | 60.0% |
| !! | GAATGGGTGGTGGTTGGTGG+TGG | - | chr8.1:17879724-17879743 | MS.gene56889:intron | 60.0% |
| !! | GAGGTGGTGGTGGAGACATG+TGG | - | chr8.1:17879633-17879652 | MS.gene56889:CDS | 60.0% |
| !! | GATGGTGTCGCGTGGTGTTG+TGG | - | chr8.1:17880061-17880080 | MS.gene56889:intron | 60.0% |
| !! | GCTGCAGGTGTCGGTGTTAG+TGG | - | chr8.1:17880169-17880188 | MS.gene56889:CDS | 60.0% |
| !! | GTGATGTGTGGTGGTGGTGG+TGG | - | chr8.1:17880089-17880108 | MS.gene56889:intron | 60.0% |
| !! | GTGGTGATGTGTGGTGGTGG+TGG | - | chr8.1:17880086-17880105 | MS.gene56889:intron | 60.0% |
| !! | GTGGTGGTGGAGACATGTGG+TGG | - | chr8.1:17879636-17879655 | MS.gene56889:CDS | 60.0% |
| !! | GTGGTGGTGGTGATGTGTGG+TGG | - | chr8.1:17880080-17880099 | MS.gene56889:intron | 60.0% |
| !! | TGGTGGTGGTGAATGGGTGG+TGG | - | chr8.1:17879714-17879733 | MS.gene56889:intron | 60.0% |
| !! | TTGTGTGCGATGGTGTCGCG+TGG | - | chr8.1:17880053-17880072 | MS.gene56889:intron | 60.0% |
| ACACCGACACCTGCAGCCGT+AGG | + | chr8.1:17880166-17880185 | None:intergenic | 65.0% | |
| GTACGTGGTTCATGGGGGGG+TGG | - | chr8.1:17879971-17879990 | MS.gene56889:intron | 65.0% | |
| TGTGAGGCCGGCTATGGTGG+TGG | - | chr8.1:17879577-17879596 | MS.gene56889:intron | 65.0% | |
| ! | GACGTGGCGGTGGTGATGTG+TGG | - | chr8.1:17880120-17880139 | MS.gene56889:intron | 65.0% |
| ! | GTGGACTGTAGGTGGGGACG+GGG | - | chr8.1:17880201-17880220 | MS.gene56889:CDS | 65.0% |
| !! | GGTGGTGGTTGGTGGTGGAG+AGG | - | chr8.1:17879729-17879748 | MS.gene56889:intron | 65.0% |
| !! | GGTGTCGCGTGGTGTTGTGG+TGG | - | chr8.1:17880064-17880083 | MS.gene56889:intron | 65.0% |
| !! | GTCGCGTGGTGTTGTGGTGG+TGG | - | chr8.1:17880067-17880086 | MS.gene56889:intron | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGGA+CGG | - | chr8.1:17880096-17880115 | MS.gene56889:intron | 65.0% |
| AGGACGGTGGTGCGGAGACG+AGG | + | chr8.1:17879419-17879438 | None:intergenic | 70.0% | |
| CGTGGTTCATGGGGGGGTGG+CGG | - | chr8.1:17879974-17879993 | MS.gene56889:intron | 70.0% | |
| GTAGGTGGGGACGGGGTCGT+CGG | - | chr8.1:17880208-17880227 | MS.gene56889:CDS | 70.0% | |
| TGGGGACGGGGTCGTCGGTA+CGG | - | chr8.1:17880213-17880232 | MS.gene56889:CDS | 70.0% | |
| ! | TTCATGGGGGGGTGGCGGTG+TGG | - | chr8.1:17879979-17879998 | MS.gene56889:intron | 70.0% |
| !! | GGTGGTGGACGGTGACGTGG+CGG | - | chr8.1:17880107-17880126 | MS.gene56889:intron | 70.0% |
| !! | GGTGGTGGTGGACGGTGACG+TGG | - | chr8.1:17880104-17880123 | MS.gene56889:intron | 70.0% |
| GGGGACGGGGTCGTCGGTAC+GGG | - | chr8.1:17880214-17880233 | MS.gene56889:CDS | 75.0% | |
| GGTGGACGGTGACGTGGCGG+TGG | - | chr8.1:17880110-17880129 | MS.gene56889:intron | 75.0% | |
| ! | ATGGGGGGGTGGCGGTGTGG+TGG | - | chr8.1:17879982-17880001 | MS.gene56889:intron | 75.0% |
| !! | GGGGGGTGGCGGTGTGGTGG+TGG | - | chr8.1:17879985-17880004 | MS.gene56889:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17879410 | 17880240 | 17879410 | ID=MS.gene56889 |
| chr8.1 | mRNA | 17879410 | 17880240 | 17879410 | ID=MS.gene56889.t1;Parent=MS.gene56889 |
| chr8.1 | exon | 17880154 | 17880240 | 17880154 | ID=MS.gene56889.t1.exon1;Parent=MS.gene56889.t1 |
| chr8.1 | CDS | 17880154 | 17880240 | 17880154 | ID=cds.MS.gene56889.t1;Parent=MS.gene56889.t1 |
| chr8.1 | exon | 17879833 | 17879895 | 17879833 | ID=MS.gene56889.t1.exon2;Parent=MS.gene56889.t1 |
| chr8.1 | CDS | 17879833 | 17879895 | 17879833 | ID=cds.MS.gene56889.t1;Parent=MS.gene56889.t1 |
| chr8.1 | exon | 17879615 | 17879729 | 17879615 | ID=MS.gene56889.t1.exon3;Parent=MS.gene56889.t1 |
| chr8.1 | CDS | 17879615 | 17879729 | 17879615 | ID=cds.MS.gene56889.t1;Parent=MS.gene56889.t1 |
| chr8.1 | exon | 17879410 | 17879474 | 17879410 | ID=MS.gene56889.t1.exon4;Parent=MS.gene56889.t1 |
| chr8.1 | CDS | 17879410 | 17879474 | 17879410 | ID=cds.MS.gene56889.t1;Parent=MS.gene56889.t1 |
| Gene Sequence |
| Protein sequence |
