Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58214.t1 | XP_003610261.2 | 98.7 | 304 | 4 | 0 | 6 | 309 | 56 | 359 | 7.30E-147 | 530 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58214.t1 | Q94AN4 | 84.4 | 167 | 26 | 0 | 6 | 172 | 64 | 230 | 5.9e-81 | 302.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58214.t1 | G7JFH5 | 98.7 | 304 | 4 | 0 | 6 | 309 | 56 | 359 | 5.2e-147 | 530.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene58214.t1 | TF | AP2/ERF-AP2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene58214 | 0.802719 | 4.91E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene58214 | 0.829307 | 5.54E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene58214 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene58214 | 0.815204 | 1.04E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene58214 | 0.809445 | 1.89E-50 | -1.69E-46 |
| MS.gene052732 | MS.gene58214 | 0.816154 | 6.40E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene58214 | 0.845879 | 3.08E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene58214 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene58214 | 0.854374 | 1.28E-61 | -1.69E-46 |
| MS.gene054554 | MS.gene58214 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene58214 | 0.833235 | 5.99E-56 | -1.69E-46 |
| MS.gene055465 | MS.gene58214 | 0.80689 | 6.60E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene58214 | 0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene58214 | 0.806356 | 8.56E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene58214 | 0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene58214 | -0.823237 | 1.54E-53 | -1.69E-46 |
| MS.gene055891 | MS.gene58214 | 0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene056043 | MS.gene58214 | -0.812282 | 4.59E-51 | -1.69E-46 |
| MS.gene056797 | MS.gene58214 | 0.81985 | 9.35E-53 | -1.69E-46 |
| MS.gene058945 | MS.gene58214 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene060884 | MS.gene58214 | 0.809803 | 1.58E-50 | -1.69E-46 |
| MS.gene060886 | MS.gene58214 | 0.806547 | 7.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58214.t1 | MTR_4g130270 | 99.671 | 304 | 1 | 0 | 6 | 309 | 56 | 359 | 0.0 | 635 |
| MS.gene58214.t1 | MTR_2g460730 | 67.427 | 307 | 76 | 7 | 6 | 299 | 56 | 351 | 6.58e-129 | 372 |
| MS.gene58214.t1 | MTR_4g007770 | 60.518 | 309 | 82 | 7 | 6 | 304 | 45 | 323 | 2.12e-114 | 333 |
| MS.gene58214.t1 | MTR_7g009410 | 72.472 | 178 | 45 | 2 | 6 | 183 | 74 | 247 | 7.19e-93 | 281 |
| MS.gene58214.t1 | MTR_6g011490 | 49.492 | 295 | 119 | 6 | 6 | 279 | 70 | 355 | 1.26e-91 | 277 |
| MS.gene58214.t1 | MTR_8g468920 | 53.691 | 298 | 111 | 10 | 6 | 289 | 78 | 362 | 3.57e-91 | 277 |
| MS.gene58214.t1 | MTR_8g044070 | 50.345 | 290 | 127 | 6 | 6 | 288 | 64 | 343 | 7.03e-88 | 269 |
| MS.gene58214.t1 | MTR_4g127930 | 72.327 | 159 | 44 | 0 | 6 | 164 | 168 | 326 | 8.39e-85 | 264 |
| MS.gene58214.t1 | MTR_4g127930 | 40.230 | 87 | 44 | 1 | 88 | 166 | 148 | 234 | 6.27e-11 | 63.2 |
| MS.gene58214.t1 | MTR_8g044040 | 74.251 | 167 | 40 | 1 | 6 | 172 | 65 | 228 | 5.35e-83 | 256 |
| MS.gene58214.t1 | MTR_7g080460 | 72.327 | 159 | 44 | 0 | 6 | 164 | 268 | 426 | 4.53e-81 | 259 |
| MS.gene58214.t1 | MTR_7g080460 | 41.176 | 85 | 42 | 1 | 90 | 166 | 250 | 334 | 2.20e-11 | 65.1 |
| MS.gene58214.t1 | MTR_4g065370 | 69.811 | 159 | 48 | 0 | 6 | 164 | 172 | 330 | 8.21e-81 | 254 |
| MS.gene58214.t1 | MTR_5g015070 | 71.069 | 159 | 46 | 0 | 6 | 164 | 258 | 416 | 3.11e-80 | 253 |
| MS.gene58214.t1 | MTR_5g015070 | 36.275 | 102 | 56 | 2 | 77 | 169 | 226 | 327 | 1.90e-11 | 65.1 |
| MS.gene58214.t1 | MTR_2g098180 | 69.811 | 159 | 48 | 0 | 6 | 164 | 176 | 334 | 3.83e-80 | 252 |
| MS.gene58214.t1 | MTR_2g098180 | 40.659 | 91 | 46 | 1 | 84 | 166 | 152 | 242 | 2.47e-11 | 64.7 |
| MS.gene58214.t1 | MTR_4g097520 | 59.903 | 207 | 70 | 3 | 6 | 202 | 319 | 522 | 4.44e-77 | 248 |
| MS.gene58214.t1 | MTR_8g020510 | 70.000 | 160 | 45 | 1 | 5 | 164 | 256 | 412 | 1.10e-76 | 244 |
| MS.gene58214.t1 | MTR_3g103460 | 69.182 | 159 | 46 | 1 | 6 | 164 | 319 | 474 | 4.20e-75 | 243 |
| MS.gene58214.t1 | MTR_1g017400 | 69.182 | 159 | 46 | 1 | 6 | 164 | 321 | 476 | 4.21e-74 | 240 |
| MS.gene58214.t1 | MTR_8g068510 | 66.667 | 159 | 50 | 1 | 6 | 164 | 140 | 295 | 9.01e-74 | 232 |
| MS.gene58214.t1 | MTR_5g031880 | 68.125 | 160 | 48 | 1 | 5 | 164 | 232 | 388 | 8.01e-65 | 212 |
| MS.gene58214.t1 | MTR_7g091390 | 52.299 | 174 | 69 | 4 | 5 | 177 | 65 | 225 | 3.79e-45 | 158 |
| MS.gene58214.t1 | MTR_4g094868 | 47.179 | 195 | 89 | 4 | 7 | 201 | 183 | 363 | 7.50e-41 | 149 |
| MS.gene58214.t1 | MTR_4g094868 | 46.667 | 195 | 91 | 4 | 7 | 201 | 183 | 364 | 1.32e-40 | 148 |
| MS.gene58214.t1 | MTR_2g093060 | 46.927 | 179 | 84 | 3 | 7 | 185 | 141 | 308 | 2.39e-40 | 147 |
| MS.gene58214.t1 | MTR_2g093060 | 46.927 | 179 | 84 | 3 | 7 | 185 | 141 | 308 | 2.43e-40 | 146 |
| MS.gene58214.t1 | MTR_7g100590 | 46.927 | 179 | 82 | 4 | 7 | 185 | 146 | 311 | 1.04e-39 | 145 |
| MS.gene58214.t1 | MTR_5g016810 | 48.045 | 179 | 78 | 4 | 7 | 185 | 159 | 322 | 4.68e-39 | 144 |
| MS.gene58214.t1 | MTR_4g061200 | 50.000 | 158 | 68 | 3 | 7 | 164 | 138 | 284 | 6.81e-39 | 141 |
| MS.gene58214.t1 | MTR_4g061200 | 50.000 | 158 | 68 | 3 | 7 | 164 | 138 | 284 | 3.27e-38 | 141 |
| MS.gene58214.t1 | MTR_4g094868 | 46.667 | 180 | 92 | 2 | 22 | 201 | 32 | 207 | 5.09e-37 | 135 |
| MS.gene58214.t1 | MTR_5g016810 | 45.946 | 185 | 79 | 5 | 7 | 185 | 159 | 328 | 2.70e-36 | 136 |
| MS.gene58214.t1 | MTR_7g061190 | 49.624 | 133 | 66 | 1 | 32 | 164 | 3 | 134 | 4.72e-32 | 117 |
| MS.gene58214.t1 | MTR_2g093060 | 43.017 | 179 | 76 | 4 | 7 | 185 | 141 | 293 | 2.91e-31 | 122 |
| MS.gene58214.t1 | MTR_4g061200 | 45.570 | 158 | 60 | 4 | 7 | 164 | 138 | 269 | 1.10e-29 | 116 |
| MS.gene58214.t1 | MTR_4g061200 | 45.570 | 158 | 60 | 4 | 7 | 164 | 138 | 269 | 3.34e-29 | 116 |
| MS.gene58214.t1 | MTR_7g091390 | 48.966 | 145 | 63 | 3 | 34 | 177 | 3 | 137 | 3.73e-29 | 114 |
| MS.gene58214.t1 | MTR_3g090510 | 45.370 | 108 | 58 | 1 | 38 | 145 | 163 | 269 | 1.31e-18 | 85.9 |
| MS.gene58214.t1 | MTR_7g060560 | 43.519 | 108 | 59 | 2 | 38 | 145 | 156 | 261 | 1.08e-15 | 77.4 |
| MS.gene58214.t1 | MTR_1g049140 | 35.374 | 147 | 82 | 5 | 7 | 152 | 144 | 278 | 1.44e-12 | 67.8 |
| MS.gene58214.t1 | MTR_1g049140 | 36.054 | 147 | 81 | 5 | 7 | 152 | 144 | 278 | 2.08e-12 | 67.4 |
| MS.gene58214.t1 | MTR_1g049140 | 40.171 | 117 | 59 | 3 | 7 | 123 | 144 | 249 | 3.07e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58214.t1 | AT1G16060 | 56.766 | 303 | 96 | 5 | 6 | 300 | 64 | 339 | 2.55e-93 | 280 |
| MS.gene58214.t1 | AT1G79700 | 54.248 | 306 | 80 | 6 | 6 | 304 | 58 | 310 | 7.15e-91 | 273 |
| MS.gene58214.t1 | AT3G54320 | 80.488 | 164 | 32 | 0 | 6 | 169 | 71 | 234 | 6.24e-88 | 270 |
| MS.gene58214.t1 | AT3G54320 | 80.488 | 164 | 32 | 0 | 6 | 169 | 71 | 234 | 8.38e-88 | 270 |
| MS.gene58214.t1 | AT5G57390 | 72.327 | 159 | 44 | 0 | 6 | 164 | 91 | 249 | 2.07e-84 | 261 |
| MS.gene58214.t1 | AT5G57390 | 72.327 | 159 | 44 | 0 | 6 | 164 | 209 | 367 | 1.66e-83 | 262 |
| MS.gene58214.t1 | AT5G17430 | 72.327 | 159 | 44 | 0 | 6 | 164 | 154 | 312 | 6.01e-81 | 254 |
| MS.gene58214.t1 | AT5G17430 | 44.304 | 79 | 36 | 1 | 96 | 166 | 142 | 220 | 9.82e-11 | 62.8 |
| MS.gene58214.t1 | AT1G51190 | 69.811 | 159 | 48 | 0 | 6 | 164 | 196 | 354 | 1.18e-80 | 255 |
| MS.gene58214.t1 | AT5G17430 | 72.327 | 159 | 44 | 0 | 6 | 164 | 216 | 374 | 1.23e-80 | 255 |
| MS.gene58214.t1 | AT5G17430 | 44.304 | 79 | 36 | 1 | 96 | 166 | 204 | 282 | 9.52e-11 | 62.8 |
| MS.gene58214.t1 | AT1G72570 | 70.440 | 159 | 47 | 0 | 6 | 164 | 229 | 387 | 1.29e-80 | 250 |
| MS.gene58214.t1 | AT1G72570 | 40.206 | 97 | 49 | 2 | 88 | 175 | 208 | 304 | 8.04e-11 | 62.8 |
| MS.gene58214.t1 | AT1G79700 | 50.980 | 306 | 80 | 7 | 6 | 304 | 58 | 300 | 1.25e-79 | 244 |
| MS.gene58214.t1 | AT3G20840 | 67.925 | 159 | 51 | 0 | 6 | 164 | 187 | 345 | 4.63e-79 | 251 |
| MS.gene58214.t1 | AT4G37750 | 69.182 | 159 | 49 | 0 | 6 | 164 | 289 | 447 | 2.66e-76 | 243 |
| MS.gene58214.t1 | AT1G16060 | 53.430 | 277 | 94 | 5 | 32 | 300 | 20 | 269 | 4.09e-71 | 221 |
| MS.gene58214.t1 | AT5G65510 | 69.811 | 159 | 48 | 0 | 6 | 164 | 179 | 337 | 2.51e-70 | 224 |
| MS.gene58214.t1 | AT5G65510 | 69.811 | 159 | 48 | 0 | 6 | 164 | 237 | 395 | 4.23e-70 | 226 |
| MS.gene58214.t1 | AT5G65510 | 69.811 | 159 | 48 | 0 | 6 | 164 | 237 | 395 | 4.23e-70 | 226 |
| MS.gene58214.t1 | AT1G79700 | 51.079 | 278 | 76 | 6 | 34 | 304 | 10 | 234 | 1.08e-68 | 214 |
| MS.gene58214.t1 | AT3G54320 | 80.882 | 136 | 26 | 0 | 34 | 169 | 33 | 168 | 4.18e-68 | 217 |
| MS.gene58214.t1 | AT3G54320 | 80.882 | 136 | 26 | 0 | 34 | 169 | 33 | 168 | 4.18e-68 | 217 |
| MS.gene58214.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 236 | 394 | 4.82e-68 | 221 |
| MS.gene58214.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 236 | 394 | 4.82e-68 | 221 |
| MS.gene58214.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 259 | 417 | 7.52e-68 | 221 |
| MS.gene58214.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 274 | 432 | 8.53e-68 | 222 |
| MS.gene58214.t1 | AT5G10510 | 68.553 | 159 | 50 | 0 | 6 | 164 | 274 | 432 | 8.53e-68 | 222 |
| MS.gene58214.t1 | AT1G79700 | 50.362 | 276 | 77 | 6 | 36 | 304 | 6 | 228 | 9.28e-67 | 209 |
| MS.gene58214.t1 | AT5G10510 | 66.667 | 159 | 50 | 1 | 6 | 164 | 236 | 391 | 1.39e-63 | 210 |
| MS.gene58214.t1 | AT5G65510 | 68.462 | 130 | 41 | 0 | 5 | 134 | 178 | 307 | 6.53e-63 | 201 |
| MS.gene58214.t1 | AT5G10510 | 59.218 | 179 | 53 | 1 | 6 | 164 | 274 | 452 | 1.65e-60 | 203 |
| MS.gene58214.t1 | AT1G16060 | 50.000 | 232 | 81 | 5 | 77 | 300 | 1 | 205 | 3.07e-53 | 173 |
| MS.gene58214.t1 | AT1G16060 | 50.000 | 232 | 81 | 5 | 77 | 300 | 1 | 205 | 3.07e-53 | 173 |
| MS.gene58214.t1 | AT1G16060 | 50.000 | 232 | 81 | 5 | 77 | 300 | 1 | 205 | 3.07e-53 | 173 |
| MS.gene58214.t1 | AT1G16060 | 50.000 | 232 | 81 | 5 | 77 | 300 | 1 | 205 | 3.07e-53 | 173 |
| MS.gene58214.t1 | AT2G41710 | 54.167 | 168 | 68 | 2 | 6 | 173 | 76 | 234 | 3.29e-49 | 169 |
| MS.gene58214.t1 | AT2G41710 | 52.299 | 174 | 74 | 2 | 6 | 179 | 76 | 240 | 4.39e-49 | 170 |
| MS.gene58214.t1 | AT2G41710 | 52.299 | 174 | 74 | 2 | 6 | 179 | 111 | 275 | 5.77e-49 | 169 |
| MS.gene58214.t1 | AT2G41710 | 50.838 | 179 | 74 | 3 | 6 | 179 | 76 | 245 | 8.14e-47 | 163 |
| MS.gene58214.t1 | AT3G54320 | 82.796 | 93 | 16 | 0 | 77 | 169 | 1 | 93 | 8.25e-43 | 149 |
| MS.gene58214.t1 | AT2G28550 | 46.193 | 197 | 89 | 4 | 7 | 203 | 160 | 339 | 5.79e-41 | 148 |
| MS.gene58214.t1 | AT4G36920 | 43.868 | 212 | 102 | 5 | 7 | 212 | 138 | 338 | 2.23e-40 | 146 |
| MS.gene58214.t1 | AT4G36920 | 43.868 | 212 | 102 | 5 | 7 | 212 | 138 | 338 | 2.23e-40 | 146 |
| MS.gene58214.t1 | AT5G67180 | 49.367 | 158 | 69 | 3 | 7 | 164 | 103 | 249 | 4.98e-38 | 137 |
| MS.gene58214.t1 | AT5G67180 | 49.367 | 158 | 69 | 3 | 7 | 164 | 103 | 249 | 7.50e-38 | 135 |
| MS.gene58214.t1 | AT5G67180 | 49.367 | 158 | 69 | 3 | 7 | 164 | 103 | 249 | 1.47e-37 | 137 |
| MS.gene58214.t1 | AT2G28550 | 49.254 | 134 | 57 | 3 | 7 | 140 | 160 | 282 | 4.60e-32 | 122 |
| MS.gene58214.t1 | AT2G28550 | 42.640 | 197 | 81 | 5 | 7 | 203 | 160 | 324 | 7.60e-32 | 123 |
| MS.gene58214.t1 | AT1G16060 | 42.857 | 203 | 81 | 5 | 106 | 300 | 8 | 183 | 2.22e-30 | 114 |
| MS.gene58214.t1 | AT5G67180 | 46.715 | 137 | 62 | 3 | 7 | 143 | 103 | 228 | 1.81e-28 | 110 |
| MS.gene58214.t1 | AT2G28550 | 49.167 | 120 | 50 | 3 | 7 | 126 | 160 | 268 | 2.03e-26 | 105 |
| MS.gene58214.t1 | AT2G28550 | 49.167 | 120 | 50 | 3 | 7 | 126 | 160 | 268 | 2.03e-26 | 105 |
| MS.gene58214.t1 | AT2G28550 | 41.765 | 170 | 77 | 3 | 34 | 203 | 11 | 158 | 9.74e-26 | 103 |
| MS.gene58214.t1 | AT2G39250 | 43.878 | 98 | 45 | 2 | 7 | 104 | 115 | 202 | 9.89e-21 | 89.4 |
| MS.gene58214.t1 | AT2G39250 | 43.878 | 98 | 45 | 2 | 7 | 104 | 115 | 202 | 3.14e-20 | 89.7 |
| MS.gene58214.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.06e-19 | 88.2 |
| MS.gene58214.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.06e-19 | 88.2 |
| MS.gene58214.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.06e-19 | 88.2 |
| MS.gene58214.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.17e-19 | 88.6 |
| MS.gene58214.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 2.49e-19 | 88.6 |
| MS.gene58214.t1 | AT5G60120 | 38.411 | 151 | 67 | 4 | 7 | 157 | 167 | 291 | 3.13e-19 | 88.2 |
| MS.gene58214.t1 | AT3G54990 | 43.564 | 101 | 47 | 2 | 7 | 107 | 129 | 219 | 2.47e-16 | 77.4 |
| MS.gene58214.t1 | AT3G54990 | 43.564 | 101 | 47 | 2 | 7 | 107 | 129 | 219 | 8.94e-16 | 77.4 |
| MS.gene58214.t1 | AT1G03800 | 35.556 | 135 | 83 | 3 | 72 | 203 | 22 | 155 | 9.97e-11 | 61.2 |
Find 70 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTCATCTAAGTTTA+AGG | 0.098001 | 8.2:-4349779 | MS.gene58214:CDS |
| ATCTAGCAGCATTGAAATAT+TGG | 0.269149 | 8.2:-4353744 | MS.gene58214:CDS |
| AAGCTGTAGCTGCTTCTTCT+TGG | 0.308304 | 8.2:+4350088 | None:intergenic |
| ATAACGGCTGAGATCGAAAT+TGG | 0.311170 | 8.2:+4350023 | None:intergenic |
| GTCATCGTTGCTATTATTGT+TGG | 0.330644 | 8.2:+4349984 | None:intergenic |
| GATTAATACTCACCTTCTTA+AGG | 0.332089 | 8.2:+4353542 | None:intergenic |
| GTCATCTAAGTTTAAGGAAA+TGG | 0.343211 | 8.2:-4349773 | MS.gene58214:CDS |
| TCTAGCAGCATTGAAATATT+GGG | 0.363825 | 8.2:-4353743 | MS.gene58214:CDS |
| AGCTGTAGCTGCTTCTTCTT+GGG | 0.378837 | 8.2:+4350089 | None:intergenic |
| AATGTCACAAAGATTAATAT+TGG | 0.380390 | 8.2:+4349951 | None:intergenic |
| CAATCAAGGGAGGAGTATAT+TGG | 0.384836 | 8.2:-4353567 | MS.gene58214:CDS |
| ATCTCAGCCGTTATATTAAG+TGG | 0.390059 | 8.2:-4350014 | MS.gene58214:CDS |
| CTCAAACTCTAATGAAGAAC+TGG | 0.396693 | 8.2:-4349905 | MS.gene58214:CDS |
| GTTTAAGGAAATGGTGGAAA+TGG | 0.403137 | 8.2:-4349764 | MS.gene58214:CDS |
| ACGTTCCATTATGACTTTGA+AGG | 0.409164 | 8.2:-4349601 | MS.gene58214:CDS |
| AATTACCGGAAAATTAATAA+TGG | 0.409895 | 8.2:+4353711 | None:intergenic |
| GGCAATAAGTATCTTTATCT+CGG | 0.416691 | 8.2:-4352518 | MS.gene58214:CDS |
| TATCTTTATCTCGGAACATA+TGG | 0.418592 | 8.2:-4352509 | MS.gene58214:intron |
| TCATCGTTGCTATTATTGTT+GGG | 0.426434 | 8.2:+4349985 | None:intergenic |
| TTCATTAGAGTTTGAGTCGT+TGG | 0.432547 | 8.2:+4349912 | None:intergenic |
| ATTTGTGGGACAAGAATTGT+TGG | 0.438001 | 8.2:-4354079 | MS.gene58214:CDS |
| CAGCACCTTCAAAGTCATAA+TGG | 0.453462 | 8.2:+4349596 | None:intergenic |
| GTTTAAGCCACTTAATATAA+CGG | 0.455696 | 8.2:+4350007 | None:intergenic |
| GTCGATATGAAGCTCATTTG+TGG | 0.463814 | 8.2:-4354094 | MS.gene58214:CDS |
| ATAATGGAACGTAGGCATAA+TGG | 0.466327 | 8.2:+4349612 | None:intergenic |
| AGGGCTGATGTGGCACTAGT+TGG | 0.472897 | 8.2:+4349811 | None:intergenic |
| TCGATATGAAGCTCATTTGT+GGG | 0.483951 | 8.2:-4354093 | MS.gene58214:CDS |
| AAGTACGTTTGAATGTCATC+AGG | 0.487256 | 8.2:+4349679 | None:intergenic |
| ATGACTGAAGCAAAAGCTCT+AGG | 0.492154 | 8.2:+4349791 | None:intergenic |
| AATGAGTCTCAGAACAAGAA+AGG | 0.503226 | 8.2:-4354056 | MS.gene58214:CDS |
| GGAAGGTGGGAGGCACGGAT+TGG | 0.503282 | 8.2:-4352551 | MS.gene58214:CDS |
| TTCAGGTGCTTATGATAATG+AGG | 0.506979 | 8.2:-4353788 | MS.gene58214:intron |
| TTCTATTGACGAAGCTACAT+TGG | 0.508550 | 8.2:-4349845 | MS.gene58214:CDS |
| TCGATCAGGCACCGTTGGAC+AGG | 0.512931 | 8.2:-4354116 | MS.gene58214:CDS |
| CTGATTGTTGCAGTCTACCT+TGG | 0.514833 | 8.2:-4353906 | MS.gene58214:intron |
| ATGAGTCTCAGAACAAGAAA+GGG | 0.517662 | 8.2:-4354055 | MS.gene58214:CDS |
| TGACTGAAGCAAAAGCTCTA+GGG | 0.520622 | 8.2:+4349792 | None:intergenic |
| CAAAAGCTCTAGGGCTGATG+TGG | 0.531124 | 8.2:+4349801 | None:intergenic |
| TTGAAATGGAGAGTCAATCA+AGG | 0.532530 | 8.2:-4353581 | MS.gene58214:CDS |
| GACATCATCATAACGGAAGG+TGG | 0.545087 | 8.2:-4352565 | MS.gene58214:CDS |
| TACCATCGATCAGGCACCGT+TGG | 0.551468 | 8.2:-4354121 | MS.gene58214:CDS |
| AGTATATTGGATCCTTAAGA+AGG | 0.558908 | 8.2:-4353554 | MS.gene58214:intron |
| ATCTAAGTTTAAGGAAATGG+TGG | 0.564662 | 8.2:-4349770 | MS.gene58214:CDS |
| TGCTTATGATAATGAGGAGA+CGG | 0.567000 | 8.2:-4353782 | MS.gene58214:CDS |
| TTATGACTTTGAAGGTGCTG+AGG | 0.583578 | 8.2:-4349593 | MS.gene58214:CDS |
| AAATTTCAATGATACCATGT+TGG | 0.588011 | 8.2:-4349647 | MS.gene58214:CDS |
| TGAAATGGAGAGTCAATCAA+GGG | 0.593771 | 8.2:-4353580 | MS.gene58214:CDS |
| CTCCAACGTTGTTGACACAT+TGG | 0.595590 | 8.2:+4349729 | None:intergenic |
| GTCCAACGGTGCCTGATCGA+TGG | 0.596833 | 8.2:+4354119 | None:intergenic |
| TGTTCTAGACATCATCATAA+CGG | 0.603537 | 8.2:-4352572 | MS.gene58214:intron |
| ATAACGGAAGGTGGGAGGCA+CGG | 0.604592 | 8.2:-4352556 | MS.gene58214:CDS |
| CAGAACAAGAAAGGGAGACA+AGG | 0.613931 | 8.2:-4354047 | MS.gene58214:intron |
| ACATCATCATAACGGAAGGT+GGG | 0.615401 | 8.2:-4352564 | MS.gene58214:CDS |
| ACGTAGGCATAATGGAGTTG+AGG | 0.618652 | 8.2:+4349620 | None:intergenic |
| TGGTAACAGCATTAAGTCCA+CGG | 0.621825 | 8.2:+4350043 | None:intergenic |
| CTAGACATCATCATAACGGA+AGG | 0.629308 | 8.2:-4352568 | MS.gene58214:intron |
| TTCCAATGTGTCAACAACGT+TGG | 0.630167 | 8.2:-4349731 | MS.gene58214:CDS |
| CTAAATACAGAGGTGTAGCA+AGG | 0.631468 | 8.2:-4353407 | MS.gene58214:intron |
| CTAGCAGCATTGAAATATTG+GGG | 0.632471 | 8.2:-4353742 | MS.gene58214:CDS |
| CTTCATATCGACCTGTCCAA+CGG | 0.639587 | 8.2:+4354105 | None:intergenic |
| GATGTGGCACTAGTTGGTCG+AGG | 0.640586 | 8.2:+4349817 | None:intergenic |
| GGAGTTGAGGTCTTCCAACA+TGG | 0.661453 | 8.2:+4349633 | None:intergenic |
| AGCAGCTACAGCTTATGACA+TGG | 0.665369 | 8.2:-4350079 | MS.gene58214:CDS |
| TCAAAGTCATAATGGAACGT+AGG | 0.669979 | 8.2:+4349604 | None:intergenic |
| TCATCATAACGGAAGGTGGG+AGG | 0.671171 | 8.2:-4352561 | MS.gene58214:CDS |
| GTGATATTTCATTGTCCACG+AGG | 0.678307 | 8.2:+4349875 | None:intergenic |
| CGGGGAGTATCTAAATACAG+AGG | 0.707462 | 8.2:-4353417 | MS.gene58214:CDS |
| ATGGCAGCTATTGAATACCG+TGG | 0.709584 | 8.2:-4350060 | MS.gene58214:CDS |
| AATGGAGAGTCAATCAAGGG+AGG | 0.710747 | 8.2:-4353577 | MS.gene58214:CDS |
| AGAACTGGAATTTAGCCTCG+TGG | 0.711966 | 8.2:-4349890 | MS.gene58214:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr8.2:4351732-4351751 | MS.gene58214:intron | 10.0% |
| !! | CCATATATATATATATATAA+GGG | - | chr8.2:4352594-4352613 | MS.gene58214:intron | 10.0% |
| !! | CCTTATATATATATATATAT+GGG | + | chr8.2:4352596-4352615 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr8.2:4351731-4351750 | MS.gene58214:intron | 10.0% |
| !! | TTAGCTATATATATTAATAT+TGG | + | chr8.2:4353448-4353467 | None:intergenic | 10.0% |
| !!! | ATTCTTAAAATAAGTTTTAT+AGG | + | chr8.2:4352170-4352189 | None:intergenic | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | + | chr8.2:4350730-4350749 | None:intergenic | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr8.2:4350682-4350701 | MS.gene58214:intron | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr8.2:4350681-4350700 | MS.gene58214:intron | 10.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr8.2:4353080-4353099 | MS.gene58214:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr8.2:4353099-4353080 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr8.2:4353081-4353100 | MS.gene58214:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr8.2:4353100-4353081 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr8.2:4351733-4351752 | MS.gene58214:intron | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr8.2:4352860-4352879 | None:intergenic | 15.0% |
| !! | ATAATTAACCCTATATATAA+AGG | - | chr8.2:4353144-4353163 | MS.gene58214:intron | 15.0% |
| !! | CCCATATATATATATATATA+AGG | - | chr8.2:4352593-4352612 | MS.gene58214:intron | 15.0% |
| !! | CCCTTATATATATATATATA+TGG | + | chr8.2:4352597-4352616 | None:intergenic | 15.0% |
| !! | TAATTAAATACGATAAAAGT+TGG | + | chr8.2:4352040-4352059 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr8.2:4350396-4350415 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr8.2:4352991-4353010 | MS.gene58214:intron | 15.0% |
| !!! | AAAAATTTGATAATATGCAT+GGG | - | chr8.2:4353314-4353333 | MS.gene58214:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr8.2:4350758-4350777 | MS.gene58214:intron | 15.0% |
| !!! | TAAAAATTTATCTTTTCCAA+AGG | - | chr8.2:4352068-4352087 | MS.gene58214:intron | 15.0% |
| !!! | TAAAAATTTGATAATATGCA+TGG | - | chr8.2:4353313-4353332 | MS.gene58214:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr8.2:4350796-4350815 | None:intergenic | 15.0% |
| !! | AAAATCACACTTATTAAGAA+AGG | + | chr8.2:4352232-4352251 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGACTA+GGG | + | chr8.2:4352730-4352749 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8.2:4351756-4351775 | MS.gene58214:intron | 20.0% |
| !! | AAGTTGTTAAATACATCTTA+AGG | + | chr8.2:4352513-4352532 | None:intergenic | 20.0% |
| !! | AATGCAGAAAAACAAAATTA+GGG | + | chr8.2:4352697-4352716 | None:intergenic | 20.0% |
| !! | AATGTCACAAAGATTAATAT+TGG | + | chr8.2:4353762-4353781 | None:intergenic | 20.0% |
| !! | AATTACCGGAAAATTAATAA+TGG | + | chr8.2:4350002-4350021 | None:intergenic | 20.0% |
| !! | ATCTTATCTGACATTAAAAT+TGG | - | chr8.2:4353555-4353574 | MS.gene58214:CDS | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr8.2:4350369-4350388 | MS.gene58214:intron | 20.0% |
| !! | TAAACAAATTTGAATTGACT+AGG | + | chr8.2:4352731-4352750 | None:intergenic | 20.0% |
| !! | TCAAAAAGAACTAATTGAAA+TGG | - | chr8.2:4350115-4350134 | MS.gene58214:intron | 20.0% |
| !!! | AAAACAATTTTCATTGGTTA+TGG | + | chr8.2:4352139-4352158 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCATTGGTTAT+GGG | + | chr8.2:4352138-4352157 | None:intergenic | 20.0% |
| !!! | AAGTACTTAAATGATTCTTT+TGG | + | chr8.2:4349876-4349895 | None:intergenic | 20.0% |
| !!! | AATTTTGCAATAACTTTTTG+CGG | + | chr8.2:4352825-4352844 | None:intergenic | 20.0% |
| !!! | ACTCATTCTAAAAAATAAGT+GGG | + | chr8.2:4352474-4352493 | None:intergenic | 20.0% |
| !!! | AGATACCATTATTAATTTTC+CGG | - | chr8.2:4349994-4350013 | MS.gene58214:CDS | 20.0% |
| !!! | ATGTATCTAGTCTTTATTAT+AGG | - | chr8.2:4351006-4351025 | MS.gene58214:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8.2:4351866-4351885 | MS.gene58214:intron | 20.0% |
| !!! | GATGTAAAAACAATTTTCAT+TGG | + | chr8.2:4352145-4352164 | None:intergenic | 20.0% |
| !!! | GGTCTTTTTGTTTATAATTT+GGG | + | chr8.2:4352019-4352038 | None:intergenic | 20.0% |
| !!! | GTACTAATAATTTTTTTGAG+AGG | + | chr8.2:4351392-4351411 | None:intergenic | 20.0% |
| !!! | TATAGAGTTTTAACTGTATA+AGG | + | chr8.2:4350356-4350375 | None:intergenic | 20.0% |
| !!! | TCATTTTGTAGTAAAAGAAA+AGG | + | chr8.2:4351278-4351297 | None:intergenic | 20.0% |
| !!! | TGGTCTTTTTGTTTATAATT+TGG | + | chr8.2:4352020-4352039 | None:intergenic | 20.0% |
| !!! | TTTTCCCTTTCTTATAATAT+GGG | - | chr8.2:4352251-4352270 | MS.gene58214:intron | 20.0% |
| !!! | TTTTTCCCTTTCTTATAATA+TGG | - | chr8.2:4352250-4352269 | MS.gene58214:intron | 20.0% |
| !!! | TTTTTCCTTATAATTTGAGA+CGG | + | chr8.2:4351978-4351997 | None:intergenic | 20.0% |
| ! | AAATTTCAATGATACCATGT+TGG | - | chr8.2:4354063-4354082 | MS.gene58214:CDS | 25.0% |
| ! | AATAGAAGCAATGAATTGAA+TGG | + | chr8.2:4351537-4351556 | None:intergenic | 25.0% |
| ! | AATCCTCTCCTTTATATATA+GGG | + | chr8.2:4353155-4353174 | None:intergenic | 25.0% |
| ! | ACAACAATCTAAATTTAGGT+AGG | - | chr8.2:4351436-4351455 | MS.gene58214:intron | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+AGG | - | chr8.2:4352556-4352575 | MS.gene58214:CDS | 25.0% |
| ! | AGGGAGTAAAAATCAATTTA+AGG | - | chr8.2:4351090-4351109 | MS.gene58214:intron | 25.0% |
| ! | AGGTACAACAATCTAAATTT+AGG | - | chr8.2:4351432-4351451 | MS.gene58214:intron | 25.0% |
| ! | ATTTAAACACAACTCACTTA+AGG | + | chr8.2:4353352-4353371 | None:intergenic | 25.0% |
| ! | CAATGCAGAAAAACAAAATT+AGG | + | chr8.2:4352698-4352717 | None:intergenic | 25.0% |
| ! | CTGAACTAATTAATAAATCC+TGG | + | chr8.2:4350050-4350069 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8.2:4351755-4351774 | MS.gene58214:intron | 25.0% |
| ! | GTACAGTAAATGTAAATAAG+AGG | - | chr8.2:4350607-4350626 | MS.gene58214:intron | 25.0% |
| ! | GTTTAAGCCACTTAATATAA+CGG | + | chr8.2:4353706-4353725 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr8.2:4350374-4350393 | MS.gene58214:intron | 25.0% |
| ! | TAAATTTAGATTGTTGTACC+TGG | + | chr8.2:4351433-4351452 | None:intergenic | 25.0% |
| ! | TATATATAAACTACGTACCA+AGG | + | chr8.2:4349824-4349843 | None:intergenic | 25.0% |
| ! | TTCTTAATTACACTCTTGTT+TGG | + | chr8.2:4350907-4350926 | None:intergenic | 25.0% |
| ! | TTCTTTGGTATCTATGAAAT+CGG | - | chr8.2:4353173-4353192 | MS.gene58214:intron | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr8.2:4352409-4352428 | MS.gene58214:intron | 25.0% |
| !! | CACTCATTCTAAAAAATAAG+TGG | + | chr8.2:4352475-4352494 | None:intergenic | 25.0% |
| !! | CAGATAAGATATTGATTAGT+CGG | + | chr8.2:4353545-4353564 | None:intergenic | 25.0% |
| !! | TAAGCAAAACTTCATTTTCT+AGG | - | chr8.2:4350968-4350987 | MS.gene58214:intron | 25.0% |
| !! | TATATATATATGGGTTTGCT+AGG | + | chr8.2:4352587-4352606 | None:intergenic | 25.0% |
| !! | TTCAAGGTCTCTATTTTATA+GGG | + | chr8.2:4352637-4352656 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr8.2:4351843-4351862 | MS.gene58214:intron | 25.0% |
| !! | TTTCAAGGTCTCTATTTTAT+AGG | + | chr8.2:4352638-4352657 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr8.2:4353020-4353039 | MS.gene58214:intron | 25.0% |
| !!! | ACACCTACTAGTTTTTATTA+AGG | + | chr8.2:4352562-4352581 | None:intergenic | 25.0% |
| !!! | GAATGCATTTAATTTTCCTT+TGG | + | chr8.2:4352087-4352106 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8.2:4351865-4351884 | MS.gene58214:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr8.2:4353019-4353038 | MS.gene58214:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr8.2:4351844-4351863 | MS.gene58214:intron | 25.0% |
| !!! | TGTTTGTTGTTGAGAAAAAT+TGG | + | chr8.2:4353507-4353526 | None:intergenic | 25.0% |
| !!! | TGTTTTAACTTCTTTTCATG+TGG | - | chr8.2:4349750-4349769 | MS.gene58214:CDS | 25.0% |
| AAAAATTGCAGAAAAAGCAG+TGG | - | chr8.2:4350263-4350282 | MS.gene58214:intron | 30.0% | |
| AAAACGTGGTTAGAAATTAC+CGG | + | chr8.2:4350016-4350035 | None:intergenic | 30.0% | |
| AAGTAGTTAAATACACCCTA+AGG | + | chr8.2:4352367-4352386 | None:intergenic | 30.0% | |
| ACTCCCACATAAAAATTAGT+GGG | + | chr8.2:4352328-4352347 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr8.2:4350476-4350495 | MS.gene58214:intron | 30.0% | |
| AGTATATTGGATCCTTAAGA+AGG | - | chr8.2:4350156-4350175 | MS.gene58214:intron | 30.0% | |
| ATATAAAGGAGAGGATTCTT+TGG | - | chr8.2:4353158-4353177 | MS.gene58214:intron | 30.0% | |
| ATCTAAGTTTAAGGAAATGG+TGG | - | chr8.2:4353940-4353959 | MS.gene58214:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr8.2:4352957-4352976 | None:intergenic | 30.0% | |
| CTATGGAGTAATAACTGAAT+TGG | + | chr8.2:4351566-4351585 | None:intergenic | 30.0% | |
| GAATCCTCTCCTTTATATAT+AGG | + | chr8.2:4353156-4353175 | None:intergenic | 30.0% | |
| GAGCTTGATGTTAAAATTTC+AGG | - | chr8.2:4349905-4349924 | MS.gene58214:CDS | 30.0% | |
| GATTAATACTCACCTTCTTA+AGG | + | chr8.2:4350171-4350190 | None:intergenic | 30.0% | |
| GGCAATAAGTATCTTTATCT+CGG | - | chr8.2:4351192-4351211 | MS.gene58214:intron | 30.0% | |
| GTATTATAGCAAATGCCTAT+AGG | - | chr8.2:4352433-4352452 | MS.gene58214:intron | 30.0% | |
| GTCATCTAAGTTTAAGGAAA+TGG | - | chr8.2:4353937-4353956 | MS.gene58214:intron | 30.0% | |
| TAACCCTATATATAAAGGAG+AGG | - | chr8.2:4353149-4353168 | MS.gene58214:intron | 30.0% | |
| TAATATGCATGGGTGTATAT+TGG | - | chr8.2:4353324-4353343 | MS.gene58214:intron | 30.0% | |
| TATCTTTATCTCGGAACATA+TGG | - | chr8.2:4351201-4351220 | MS.gene58214:intron | 30.0% | |
| TGGATGCATATTAAAAAACG+TGG | + | chr8.2:4350030-4350049 | None:intergenic | 30.0% | |
| TGTACGTATAAATGATCGTA+TGG | - | chr8.2:4351327-4351346 | MS.gene58214:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8.2:4351740-4351759 | MS.gene58214:intron | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | - | chr8.2:4350700-4350719 | MS.gene58214:intron | 30.0% | |
| ! | AATTGAATGGCACTTTTCTA+AGG | + | chr8.2:4351524-4351543 | None:intergenic | 30.0% |
| ! | ACACCCACTAATTTTTATGT+GGG | - | chr8.2:4352322-4352341 | MS.gene58214:intron | 30.0% |
| ! | ATCTAGCAGCATTGAAATAT+TGG | - | chr8.2:4349966-4349985 | MS.gene58214:CDS | 30.0% |
| ! | CACAAGGTCTCTATTTTATA+AGG | - | chr8.2:4353112-4353131 | MS.gene58214:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr8.2:4352408-4352427 | MS.gene58214:intron | 30.0% |
| ! | GATGATGTCTAGAACATTAA+TGG | + | chr8.2:4351134-4351153 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr8.2:4350709-4350728 | None:intergenic | 30.0% |
| ! | GTTTTGCTTATAATAGTGAC+CGG | + | chr8.2:4350958-4350977 | None:intergenic | 30.0% |
| ! | TCATCGTTGCTATTATTGTT+GGG | + | chr8.2:4353728-4353747 | None:intergenic | 30.0% |
| ! | TCTAGCAGCATTGAAATATT+GGG | - | chr8.2:4349967-4349986 | MS.gene58214:CDS | 30.0% |
| ! | TGTTCTAGACATCATCATAA+CGG | - | chr8.2:4351138-4351157 | MS.gene58214:intron | 30.0% |
| ! | TTTTACTCAATTACTCTCTC+CGG | - | chr8.2:4350936-4350955 | MS.gene58214:intron | 30.0% |
| !! | AAATTGATTTTTACTCCCTC+TGG | + | chr8.2:4351089-4351108 | None:intergenic | 30.0% |
| !! | GACTAATTTGCCTTTTTGTT+TGG | + | chr8.2:4350489-4350508 | None:intergenic | 30.0% |
| !!! | ACGTTTTTTAATATGCATCC+AGG | - | chr8.2:4350029-4350048 | MS.gene58214:CDS | 30.0% |
| !!! | TTCTCTTGCTATTTTTTTCG+TGG | + | chr8.2:4351933-4351952 | None:intergenic | 30.0% |
| AAGTACGTTTGAATGTCATC+AGG | + | chr8.2:4354034-4354053 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTTCA+AGG | + | chr8.2:4352653-4352672 | None:intergenic | 35.0% | |
| AATGAGTCTCAGAACAAGAA+AGG | - | chr8.2:4349654-4349673 | MS.gene58214:CDS | 35.0% | |
| ACGTTCCATTATGACTTTGA+AGG | - | chr8.2:4354109-4354128 | MS.gene58214:CDS | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | chr8.2:4350563-4350582 | MS.gene58214:intron | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr8.2:4351879-4351898 | MS.gene58214:intron | 35.0% | |
| ATCTCAGCCGTTATATTAAG+TGG | - | chr8.2:4353696-4353715 | MS.gene58214:intron | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr8.2:4351711-4351730 | None:intergenic | 35.0% | |
| ATGAGTCTCAGAACAAGAAA+GGG | - | chr8.2:4349655-4349674 | MS.gene58214:CDS | 35.0% | |
| ATTTGTGGGACAAGAATTGT+TGG | - | chr8.2:4349631-4349650 | MS.gene58214:CDS | 35.0% | |
| CAACAACAAACAGCTAAATC+TGG | - | chr8.2:4353515-4353534 | MS.gene58214:intron | 35.0% | |
| CACATGTACTCACATTCAAT+GGG | - | chr8.2:4351626-4351645 | MS.gene58214:intron | 35.0% | |
| CACTCCCACATAAAAATTAG+TGG | + | chr8.2:4352329-4352348 | None:intergenic | 35.0% | |
| CATGTGGCATTTCAATTCTA+TGG | - | chr8.2:4349766-4349785 | MS.gene58214:CDS | 35.0% | |
| CCCTTTCTTATAATATGGGA+CGG | - | chr8.2:4352255-4352274 | MS.gene58214:intron | 35.0% | |
| CCGTCCCATATTATAAGAAA+GGG | + | chr8.2:4352258-4352277 | None:intergenic | 35.0% | |
| CTCAAACTCTAATGAAGAAC+TGG | - | chr8.2:4353805-4353824 | MS.gene58214:intron | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | - | chr8.2:4350699-4350718 | MS.gene58214:intron | 35.0% | |
| GCTTCAGTCATCTAAGTTTA+AGG | - | chr8.2:4353931-4353950 | MS.gene58214:intron | 35.0% | |
| TCACATGTACTCACATTCAA+TGG | - | chr8.2:4351625-4351644 | MS.gene58214:intron | 35.0% | |
| TCAGTTATTACTCCATAGTG+TGG | - | chr8.2:4351568-4351587 | MS.gene58214:intron | 35.0% | |
| TCCGTCCCATATTATAAGAA+AGG | + | chr8.2:4352259-4352278 | None:intergenic | 35.0% | |
| TCGATATGAAGCTCATTTGT+GGG | - | chr8.2:4349617-4349636 | MS.gene58214:CDS | 35.0% | |
| TGAAATGGAGAGTCAATCAA+GGG | - | chr8.2:4350130-4350149 | MS.gene58214:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | chr8.2:4351071-4351090 | MS.gene58214:intron | 35.0% | |
| TTCATTAGAGTTTGAGTCGT+TGG | + | chr8.2:4353801-4353820 | None:intergenic | 35.0% | |
| TTCTATTGACGAAGCTACAT+TGG | - | chr8.2:4353865-4353884 | MS.gene58214:intron | 35.0% | |
| TTCTTATAATATGGGACGGA+GGG | - | chr8.2:4352259-4352278 | MS.gene58214:intron | 35.0% | |
| TTGAAATGGAGAGTCAATCA+AGG | - | chr8.2:4350129-4350148 | MS.gene58214:intron | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | - | chr8.2:4351070-4351089 | MS.gene58214:intron | 35.0% | |
| TTTCTTATAATATGGGACGG+AGG | - | chr8.2:4352258-4352277 | MS.gene58214:intron | 35.0% | |
| ! | AAAAAGCAGTGGTTTTTCAC+GGG | - | chr8.2:4350274-4350293 | MS.gene58214:intron | 35.0% |
| ! | ATAATGGAACGTAGGCATAA+TGG | + | chr8.2:4354101-4354120 | None:intergenic | 35.0% |
| ! | CACACCCACTAATTTTTATG+TGG | - | chr8.2:4352321-4352340 | MS.gene58214:intron | 35.0% |
| ! | CTAGCAGCATTGAAATATTG+GGG | - | chr8.2:4349968-4349987 | MS.gene58214:CDS | 35.0% |
| ! | GAAAAAGCAGTGGTTTTTCA+CGG | - | chr8.2:4350273-4350292 | MS.gene58214:intron | 35.0% |
| ! | GTCATCGTTGCTATTATTGT+TGG | + | chr8.2:4353729-4353748 | None:intergenic | 35.0% |
| ! | GTTTAAGGAAATGGTGGAAA+TGG | - | chr8.2:4353946-4353965 | MS.gene58214:intron | 35.0% |
| ! | TCAAAGTCATAATGGAACGT+AGG | + | chr8.2:4354109-4354128 | None:intergenic | 35.0% |
| ! | TGCTTATGATAATGAGGAGA+CGG | - | chr8.2:4349928-4349947 | MS.gene58214:CDS | 35.0% |
| ! | TTCAGGTGCTTATGATAATG+AGG | - | chr8.2:4349922-4349941 | MS.gene58214:CDS | 35.0% |
| ! | TTCCTTATAATTTGAGACGG+AGG | + | chr8.2:4351975-4351994 | None:intergenic | 35.0% |
| ! | TTTTAGCAAGCTACACCTTA+GGG | - | chr8.2:4352349-4352368 | MS.gene58214:intron | 35.0% |
| !!! | ACGCCCACTTATTTTTTAGA+AGG | + | chr8.2:4352415-4352434 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr8.2:4350768-4350787 | MS.gene58214:intron | 35.0% |
| AAACATTACTTCTTCCGTCC+CGG | + | chr8.2:4351901-4351920 | None:intergenic | 40.0% | |
| AAGTAGGGACTAAACTCACA+AGG | - | chr8.2:4353096-4353115 | MS.gene58214:intron | 40.0% | |
| AAGTAGTTAAGTAGCTAGCC+AGG | - | chr8.2:4351412-4351431 | MS.gene58214:intron | 40.0% | |
| AATTACGTTGCAGTGAACCT+TGG | - | chr8.2:4350521-4350540 | MS.gene58214:intron | 40.0% | |
| ATAACGGCTGAGATCGAAAT+TGG | + | chr8.2:4353690-4353709 | None:intergenic | 40.0% | |
| ATGACTGAAGCAAAAGCTCT+AGG | + | chr8.2:4353922-4353941 | None:intergenic | 40.0% | |
| ATTACGTTGCAGTGAACCTT+GGG | - | chr8.2:4350522-4350541 | MS.gene58214:intron | 40.0% | |
| CACTGCAACGTAATTCTAAG+AGG | + | chr8.2:4350516-4350535 | None:intergenic | 40.0% | |
| CAGCACCTTCAAAGTCATAA+TGG | + | chr8.2:4354117-4354136 | None:intergenic | 40.0% | |
| CTAATTTACGTTGAGTCCCA+AGG | + | chr8.2:4350541-4350560 | None:intergenic | 40.0% | |
| CTCCTCCGTCTCAAATTATA+AGG | - | chr8.2:4351970-4351989 | MS.gene58214:intron | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | - | chr8.2:4351880-4351899 | MS.gene58214:intron | 40.0% | |
| GTCGATATGAAGCTCATTTG+TGG | - | chr8.2:4349616-4349635 | MS.gene58214:CDS | 40.0% | |
| GTGATATTTCATTGTCCACG+AGG | + | chr8.2:4353838-4353857 | None:intergenic | 40.0% | |
| GTGGCATTTCAATTCTATGG+TGG | - | chr8.2:4349769-4349788 | MS.gene58214:CDS | 40.0% | |
| TGACTGAAGCAAAAGCTCTA+GGG | + | chr8.2:4353921-4353940 | None:intergenic | 40.0% | |
| TGGTAACAGCATTAAGTCCA+CGG | + | chr8.2:4353670-4353689 | None:intergenic | 40.0% | |
| TGTACGTTAGCAACTCCTAT+AGG | + | chr8.2:4352451-4352470 | None:intergenic | 40.0% | |
| TTCCAATGTGTCAACAACGT+TGG | - | chr8.2:4353979-4353998 | MS.gene58214:intron | 40.0% | |
| ! | AAAAGCAGTGGTTTTTCACG+GGG | - | chr8.2:4350275-4350294 | MS.gene58214:intron | 40.0% |
| ! | ACATCATCATAACGGAAGGT+GGG | - | chr8.2:4351146-4351165 | MS.gene58214:intron | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | + | chr8.2:4351696-4351715 | None:intergenic | 40.0% |
| ! | CAATCAAGGGAGGAGTATAT+TGG | - | chr8.2:4350143-4350162 | MS.gene58214:intron | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+CGG | + | chr8.2:4351697-4351716 | None:intergenic | 40.0% |
| ! | CTAAATACAGAGGTGTAGCA+AGG | - | chr8.2:4350303-4350322 | MS.gene58214:intron | 40.0% |
| ! | CTAGACATCATCATAACGGA+AGG | - | chr8.2:4351142-4351161 | MS.gene58214:intron | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr8.2:4350769-4350788 | MS.gene58214:intron | 40.0% |
| !! | GTTTTAGCAAGCTACACCTT+AGG | - | chr8.2:4352348-4352367 | MS.gene58214:intron | 40.0% |
| !! | TTATGACTTTGAAGGTGCTG+AGG | - | chr8.2:4354117-4354136 | MS.gene58214:CDS | 40.0% |
| AAGCTGTAGCTGCTTCTTCT+TGG | + | chr8.2:4353625-4353644 | None:intergenic | 45.0% | |
| AATGGAGAGTCAATCAAGGG+AGG | - | chr8.2:4350133-4350152 | MS.gene58214:intron | 45.0% | |
| AGAACTGGAATTTAGCCTCG+TGG | - | chr8.2:4353820-4353839 | MS.gene58214:intron | 45.0% | |
| AGCAGCTACAGCTTATGACA+TGG | - | chr8.2:4353631-4353650 | MS.gene58214:intron | 45.0% | |
| AGCTGTAGCTGCTTCTTCTT+GGG | + | chr8.2:4353624-4353643 | None:intergenic | 45.0% | |
| ATGGCAGCTATTGAATACCG+TGG | - | chr8.2:4353650-4353669 | MS.gene58214:intron | 45.0% | |
| CAGAACAAGAAAGGGAGACA+AGG | - | chr8.2:4349663-4349682 | MS.gene58214:CDS | 45.0% | |
| CTCCAACGTTGTTGACACAT+TGG | + | chr8.2:4353984-4354003 | None:intergenic | 45.0% | |
| CTGATTGTTGCAGTCTACCT+TGG | - | chr8.2:4349804-4349823 | MS.gene58214:CDS | 45.0% | |
| CTTCATATCGACCTGTCCAA+CGG | + | chr8.2:4349608-4349627 | None:intergenic | 45.0% | |
| ! | ACGTAGGCATAATGGAGTTG+AGG | + | chr8.2:4354093-4354112 | None:intergenic | 45.0% |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr8.2:4351694-4351713 | MS.gene58214:intron | 45.0% |
| ! | GACATCATCATAACGGAAGG+TGG | - | chr8.2:4351145-4351164 | MS.gene58214:intron | 45.0% |
| ! | GGCTTTGCATGGGTTATGTA+TGG | - | chr8.2:4351589-4351608 | MS.gene58214:intron | 45.0% |
| ! | TCCATAGTGTGGCTTTGCAT+GGG | - | chr8.2:4351579-4351598 | MS.gene58214:intron | 45.0% |
| !! | CGGGGAGTATCTAAATACAG+AGG | - | chr8.2:4350293-4350312 | MS.gene58214:intron | 45.0% |
| !!! | GCACGGATTGGCAAAGTTTT+TGG | - | chr8.2:4351171-4351190 | MS.gene58214:intron | 45.0% |
| !!! | AATTAAATTTTTATATAACA+CGG | + | chr8.2:4353391-4353410 | None:intergenic | 5.0% |
| !!! | ATAAGTAATTTTTTTTTATA+GGG | - | chr8.2:4353052-4353071 | MS.gene58214:intron | 5.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | + | chr8.2:4350731-4350750 | None:intergenic | 5.0% |
| !!! | TATAAGTAATTTTTTTTTAT+AGG | - | chr8.2:4353051-4353070 | MS.gene58214:intron | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr8.2:4350785-4350804 | None:intergenic | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr8.2:4350784-4350803 | None:intergenic | 50.0% | |
| ACCCATGCAAAGCCACACTA+TGG | + | chr8.2:4351583-4351602 | None:intergenic | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr8.2:4351884-4351903 | MS.gene58214:intron | 50.0% | |
| CTCAGATAAAACGGGACGGA+GGG | + | chr8.2:4351688-4351707 | None:intergenic | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | + | chr8.2:4351692-4351711 | None:intergenic | 50.0% | |
| GGACGGAGGGAGTAGTTTAT+TGG | + | chr8.2:4351675-4351694 | None:intergenic | 50.0% | |
| GGAGTTGAGGTCTTCCAACA+TGG | + | chr8.2:4354080-4354099 | None:intergenic | 50.0% | |
| ! | CTCCATAGTGTGGCTTTGCA+TGG | - | chr8.2:4351578-4351597 | MS.gene58214:intron | 50.0% |
| ! | TCATCATAACGGAAGGTGGG+AGG | - | chr8.2:4351149-4351168 | MS.gene58214:intron | 50.0% |
| !! | CAAAAGCTCTAGGGCTGATG+TGG | + | chr8.2:4353912-4353931 | None:intergenic | 50.0% |
| AGGGCTGATGTGGCACTAGT+TGG | + | chr8.2:4353902-4353921 | None:intergenic | 55.0% | |
| GATGTGGCACTAGTTGGTCG+AGG | + | chr8.2:4353896-4353915 | None:intergenic | 55.0% | |
| GCTCAGATAAAACGGGACGG+AGG | + | chr8.2:4351689-4351708 | None:intergenic | 55.0% | |
| ! | ATAACGGAAGGTGGGAGGCA+CGG | - | chr8.2:4351154-4351173 | MS.gene58214:intron | 55.0% |
| ! | TACCATCGATCAGGCACCGT+TGG | - | chr8.2:4349589-4349608 | MS.gene58214:CDS | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr8.2:4350774-4350793 | MS.gene58214:intron | 60.0% | |
| GTCCAACGGTGCCTGATCGA+TGG | + | chr8.2:4349594-4349613 | None:intergenic | 60.0% | |
| ! | TCGATCAGGCACCGTTGGAC+AGG | - | chr8.2:4349594-4349613 | MS.gene58214:CDS | 60.0% |
| ! | GGAAGGTGGGAGGCACGGAT+TGG | - | chr8.2:4351159-4351178 | MS.gene58214:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 4349585 | 4354147 | 4349585 | ID=MS.gene58214 |
| chr8.2 | mRNA | 4349585 | 4354147 | 4349585 | ID=MS.gene58214.t1;Parent=MS.gene58214 |
| chr8.2 | exon | 4354048 | 4354147 | 4354048 | ID=MS.gene58214.t1.exon1;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4354048 | 4354147 | 4354048 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| chr8.2 | exon | 4353907 | 4353915 | 4353907 | ID=MS.gene58214.t1.exon2;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4353907 | 4353915 | 4353907 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| chr8.2 | exon | 4353717 | 4353805 | 4353717 | ID=MS.gene58214.t1.exon3;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4353717 | 4353805 | 4353717 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| chr8.2 | exon | 4353555 | 4353628 | 4353555 | ID=MS.gene58214.t1.exon4;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4353555 | 4353628 | 4353555 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| chr8.2 | exon | 4353408 | 4353458 | 4353408 | ID=MS.gene58214.t1.exon5;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4353408 | 4353458 | 4353408 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| chr8.2 | exon | 4352510 | 4352586 | 4352510 | ID=MS.gene58214.t1.exon6;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4352510 | 4352586 | 4352510 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| chr8.2 | exon | 4349585 | 4350114 | 4349585 | ID=MS.gene58214.t1.exon7;Parent=MS.gene58214.t1 |
| chr8.2 | CDS | 4349585 | 4350114 | 4349585 | ID=cds.MS.gene58214.t1;Parent=MS.gene58214.t1 |
| Gene Sequence |
| Protein sequence |
