Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58463.t1 | XP_003609028.1 | 100 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 2.50E-84 | 321.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58463.t1 | P35130 | 100.0 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 6.1e-87 | 321.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58463.t1 | B7FGK6 | 100.0 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 1.8e-84 | 321.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene58463 | MS.gene014659 | PPI |
MS.gene58463 | MS.gene05127 | PPI |
MS.gene015187 | MS.gene58463 | PPI |
MS.gene58463 | MS.gene011789 | PPI |
MS.gene041043 | MS.gene58463 | PPI |
MS.gene26246 | MS.gene58463 | PPI |
MS.gene58463 | MS.gene99771 | PPI |
MS.gene40316 | MS.gene58463 | PPI |
MS.gene017247 | MS.gene58463 | PPI |
MS.gene31164 | MS.gene58463 | PPI |
MS.gene052128 | MS.gene58463 | PPI |
MS.gene58463 | MS.gene009653 | PPI |
MS.gene98045 | MS.gene58463 | PPI |
MS.gene58463 | MS.gene049594 | PPI |
MS.gene90484 | MS.gene58463 | PPI |
MS.gene75306 | MS.gene58463 | PPI |
MS.gene30950 | MS.gene58463 | PPI |
MS.gene059660 | MS.gene58463 | PPI |
MS.gene56807 | MS.gene58463 | PPI |
MS.gene53889 | MS.gene58463 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58463.t1 | MTR_4g108080 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 1.77e-113 | 318 |
MS.gene58463.t1 | MTR_8g468530 | 97.368 | 152 | 4 | 0 | 1 | 152 | 17 | 168 | 1.33e-111 | 313 |
MS.gene58463.t1 | MTR_4g108080 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 3.34e-80 | 233 |
MS.gene58463.t1 | MTR_4g108080 | 95.690 | 116 | 5 | 0 | 37 | 152 | 37 | 152 | 5.29e-80 | 233 |
MS.gene58463.t1 | MTR_5g075580 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 3.39e-45 | 145 |
MS.gene58463.t1 | MTR_3g062450 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 3.95e-45 | 145 |
MS.gene58463.t1 | MTR_8g071040 | 46.575 | 146 | 73 | 1 | 5 | 150 | 2 | 142 | 7.78e-45 | 144 |
MS.gene58463.t1 | MTR_7g116940 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 9.57e-45 | 144 |
MS.gene58463.t1 | MTR_1g021150 | 45.890 | 146 | 74 | 1 | 5 | 150 | 2 | 142 | 1.40e-44 | 143 |
MS.gene58463.t1 | MTR_4g073240 | 44.521 | 146 | 76 | 1 | 5 | 150 | 2 | 142 | 2.24e-43 | 140 |
MS.gene58463.t1 | MTR_7g116940 | 43.137 | 153 | 75 | 2 | 5 | 150 | 2 | 149 | 1.08e-41 | 136 |
MS.gene58463.t1 | MTR_4g076200 | 46.853 | 143 | 75 | 1 | 2 | 144 | 30 | 171 | 1.70e-40 | 134 |
MS.gene58463.t1 | MTR_5g009020 | 45.652 | 138 | 74 | 1 | 7 | 144 | 35 | 171 | 1.21e-38 | 129 |
MS.gene58463.t1 | MTR_4g076200 | 48.800 | 125 | 63 | 1 | 22 | 146 | 9 | 132 | 3.66e-38 | 127 |
MS.gene58463.t1 | MTR_4g094872 | 42.208 | 154 | 82 | 2 | 1 | 147 | 1 | 154 | 7.82e-38 | 127 |
MS.gene58463.t1 | MTR_2g078010 | 39.416 | 137 | 83 | 0 | 7 | 143 | 8 | 144 | 1.64e-37 | 125 |
MS.gene58463.t1 | MTR_5g016630 | 41.558 | 154 | 83 | 2 | 1 | 147 | 1 | 154 | 2.06e-37 | 125 |
MS.gene58463.t1 | MTR_2g078010 | 40.769 | 130 | 77 | 0 | 7 | 136 | 8 | 137 | 3.07e-37 | 125 |
MS.gene58463.t1 | MTR_5g075580 | 48.696 | 115 | 54 | 1 | 36 | 150 | 4 | 113 | 5.54e-36 | 120 |
MS.gene58463.t1 | MTR_1g021150 | 45.600 | 125 | 63 | 1 | 26 | 150 | 31 | 150 | 5.63e-36 | 122 |
MS.gene58463.t1 | MTR_4g073240 | 46.957 | 115 | 56 | 1 | 36 | 150 | 4 | 113 | 2.21e-34 | 117 |
MS.gene58463.t1 | MTR_4g063490 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 2.64e-34 | 118 |
MS.gene58463.t1 | MTR_7g116940 | 46.296 | 108 | 58 | 0 | 5 | 112 | 2 | 109 | 5.39e-34 | 116 |
MS.gene58463.t1 | MTR_3g110110 | 38.732 | 142 | 83 | 3 | 5 | 142 | 4 | 145 | 1.61e-33 | 115 |
MS.gene58463.t1 | MTR_2g078010 | 35.762 | 151 | 83 | 1 | 7 | 143 | 8 | 158 | 1.72e-33 | 116 |
MS.gene58463.t1 | MTR_1g095510 | 41.958 | 143 | 81 | 2 | 2 | 143 | 39 | 180 | 1.19e-32 | 114 |
MS.gene58463.t1 | MTR_1g095510 | 46.281 | 121 | 64 | 1 | 23 | 143 | 7 | 126 | 1.25e-32 | 113 |
MS.gene58463.t1 | MTR_2g096690 | 36.496 | 137 | 74 | 1 | 25 | 148 | 26 | 162 | 1.74e-30 | 108 |
MS.gene58463.t1 | MTR_7g087590 | 36.029 | 136 | 87 | 0 | 7 | 142 | 13 | 148 | 2.46e-29 | 108 |
MS.gene58463.t1 | MTR_2g078010 | 41.000 | 100 | 59 | 0 | 7 | 106 | 8 | 107 | 5.98e-29 | 102 |
MS.gene58463.t1 | MTR_2g096690 | 36.496 | 137 | 73 | 2 | 25 | 148 | 26 | 161 | 1.33e-28 | 103 |
MS.gene58463.t1 | MTR_8g085690 | 34.848 | 132 | 86 | 0 | 7 | 138 | 25 | 156 | 3.07e-28 | 102 |
MS.gene58463.t1 | MTR_1g095510 | 44.348 | 115 | 63 | 1 | 2 | 115 | 39 | 153 | 1.18e-27 | 101 |
MS.gene58463.t1 | MTR_3g098780 | 34.247 | 146 | 87 | 2 | 6 | 142 | 21 | 166 | 8.33e-27 | 100 |
MS.gene58463.t1 | MTR_3g098780 | 34.507 | 142 | 84 | 2 | 10 | 142 | 1 | 142 | 1.26e-26 | 99.4 |
MS.gene58463.t1 | MTR_8g028920 | 30.201 | 149 | 98 | 3 | 1 | 147 | 1 | 145 | 2.79e-25 | 95.5 |
MS.gene58463.t1 | MTR_4g106690 | 29.530 | 149 | 99 | 3 | 1 | 147 | 1 | 145 | 7.18e-25 | 94.7 |
MS.gene58463.t1 | MTR_8g028920 | 34.951 | 103 | 65 | 2 | 47 | 147 | 4 | 106 | 7.46e-22 | 85.9 |
MS.gene58463.t1 | MTR_8g098595 | 34.259 | 108 | 69 | 2 | 42 | 147 | 23 | 130 | 7.70e-22 | 86.3 |
MS.gene58463.t1 | MTR_5g019480 | 27.778 | 144 | 103 | 1 | 8 | 151 | 33 | 175 | 5.54e-21 | 84.3 |
MS.gene58463.t1 | MTR_5g019480 | 27.778 | 144 | 103 | 1 | 8 | 151 | 36 | 178 | 5.68e-21 | 84.3 |
MS.gene58463.t1 | MTR_5g019480 | 30.088 | 113 | 79 | 0 | 39 | 151 | 15 | 127 | 8.08e-21 | 82.8 |
MS.gene58463.t1 | MTR_4g073240 | 45.679 | 81 | 39 | 1 | 70 | 150 | 5 | 80 | 5.69e-19 | 76.6 |
MS.gene58463.t1 | MTR_2g096690 | 43.478 | 69 | 39 | 0 | 25 | 93 | 26 | 94 | 5.60e-18 | 75.1 |
MS.gene58463.t1 | MTR_4g086440 | 33.784 | 148 | 85 | 5 | 7 | 141 | 37 | 184 | 2.61e-17 | 77.0 |
MS.gene58463.t1 | MTR_7g047570 | 33.571 | 140 | 81 | 4 | 7 | 134 | 38 | 177 | 7.65e-17 | 75.9 |
MS.gene58463.t1 | MTR_7g451770 | 33.571 | 140 | 81 | 4 | 7 | 134 | 38 | 177 | 7.65e-17 | 75.9 |
MS.gene58463.t1 | MTR_8g076490 | 36.792 | 106 | 65 | 2 | 1 | 105 | 12 | 116 | 1.08e-16 | 72.8 |
MS.gene58463.t1 | MTR_7g451800 | 31.410 | 156 | 89 | 5 | 7 | 150 | 38 | 187 | 1.99e-16 | 74.7 |
MS.gene58463.t1 | MTR_7g047620 | 31.410 | 156 | 89 | 5 | 7 | 150 | 38 | 187 | 1.99e-16 | 74.7 |
MS.gene58463.t1 | MTR_8g023380 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 1.30e-15 | 71.6 |
MS.gene58463.t1 | MTR_5g021260 | 35.849 | 106 | 66 | 2 | 1 | 105 | 12 | 116 | 1.40e-15 | 69.7 |
MS.gene58463.t1 | MTR_1g073600 | 26.852 | 108 | 65 | 2 | 36 | 142 | 25 | 119 | 4.92e-14 | 65.1 |
MS.gene58463.t1 | MTR_0274s0030 | 29.932 | 147 | 89 | 5 | 7 | 139 | 114 | 260 | 1.55e-12 | 63.9 |
MS.gene58463.t1 | MTR_1g092460 | 32.812 | 128 | 74 | 5 | 7 | 122 | 177 | 304 | 5.13e-12 | 62.8 |
MS.gene58463.t1 | MTR_4g121960 | 29.457 | 129 | 81 | 4 | 1 | 124 | 7 | 130 | 5.20e-12 | 62.4 |
MS.gene58463.t1 | MTR_1g092465 | 28.667 | 150 | 87 | 7 | 3 | 138 | 238 | 381 | 1.15e-11 | 61.6 |
MS.gene58463.t1 | MTR_2g079270 | 31.148 | 122 | 74 | 4 | 7 | 118 | 307 | 428 | 2.51e-11 | 60.8 |
MS.gene58463.t1 | MTR_2g013650 | 29.268 | 123 | 75 | 3 | 7 | 118 | 682 | 803 | 6.37e-11 | 59.7 |
MS.gene58463.t1 | MTR_4g020620 | 29.268 | 123 | 75 | 3 | 7 | 118 | 629 | 750 | 6.46e-11 | 59.7 |
MS.gene58463.t1 | MTR_1g112730 | 30.081 | 123 | 74 | 4 | 7 | 118 | 856 | 977 | 6.48e-11 | 59.7 |
MS.gene58463.t1 | MTR_4g020620 | 29.268 | 123 | 75 | 3 | 7 | 118 | 571 | 692 | 7.45e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58463.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 1.14e-111 | 313 |
MS.gene58463.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 1.14e-111 | 313 |
MS.gene58463.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 1.14e-111 | 313 |
MS.gene58463.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 1.14e-111 | 313 |
MS.gene58463.t1 | AT1G14400 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.62e-110 | 310 |
MS.gene58463.t1 | AT1G14400 | 97.368 | 152 | 4 | 0 | 1 | 152 | 1 | 152 | 1.62e-110 | 310 |
MS.gene58463.t1 | AT5G62540 | 86.000 | 150 | 21 | 0 | 1 | 150 | 1 | 150 | 1.88e-98 | 280 |
MS.gene58463.t1 | AT4G27960 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 4.47e-45 | 145 |
MS.gene58463.t1 | AT1G64230 | 44.521 | 146 | 76 | 1 | 5 | 150 | 2 | 142 | 1.11e-44 | 144 |
MS.gene58463.t1 | AT1G64230 | 44.521 | 146 | 76 | 1 | 5 | 150 | 2 | 142 | 1.11e-44 | 144 |
MS.gene58463.t1 | AT5G53300 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.25e-44 | 144 |
MS.gene58463.t1 | AT5G53300 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.25e-44 | 144 |
MS.gene58463.t1 | AT5G53300 | 45.205 | 146 | 75 | 1 | 5 | 150 | 2 | 142 | 1.25e-44 | 144 |
MS.gene58463.t1 | AT4G27960 | 45.205 | 146 | 75 | 1 | 5 | 150 | 32 | 172 | 3.28e-44 | 144 |
MS.gene58463.t1 | AT3G08690 | 44.521 | 146 | 76 | 1 | 5 | 150 | 2 | 142 | 5.04e-44 | 142 |
MS.gene58463.t1 | AT3G08690 | 44.521 | 146 | 76 | 1 | 5 | 150 | 2 | 142 | 5.04e-44 | 142 |
MS.gene58463.t1 | AT2G16740 | 43.151 | 146 | 78 | 1 | 5 | 150 | 2 | 142 | 7.00e-44 | 142 |
MS.gene58463.t1 | AT5G41700 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 1.08e-43 | 141 |
MS.gene58463.t1 | AT5G41700 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 1.08e-43 | 141 |
MS.gene58463.t1 | AT5G41700 | 43.836 | 146 | 77 | 1 | 5 | 150 | 2 | 142 | 1.08e-43 | 141 |
MS.gene58463.t1 | AT3G08700 | 46.259 | 147 | 73 | 2 | 5 | 150 | 2 | 143 | 3.43e-43 | 140 |
MS.gene58463.t1 | AT3G08700 | 46.259 | 147 | 73 | 2 | 5 | 150 | 2 | 143 | 3.43e-43 | 140 |
MS.gene58463.t1 | AT5G56150 | 44.521 | 146 | 76 | 1 | 5 | 150 | 2 | 142 | 6.20e-43 | 139 |
MS.gene58463.t1 | AT1G64230 | 43.226 | 155 | 74 | 3 | 5 | 150 | 2 | 151 | 1.09e-41 | 136 |
MS.gene58463.t1 | AT5G41700 | 43.537 | 147 | 77 | 2 | 5 | 150 | 2 | 143 | 1.28e-41 | 136 |
MS.gene58463.t1 | AT3G20060 | 46.429 | 140 | 74 | 1 | 7 | 146 | 39 | 177 | 2.70e-39 | 131 |
MS.gene58463.t1 | AT1G50490 | 47.143 | 140 | 73 | 1 | 7 | 146 | 38 | 176 | 2.00e-38 | 129 |
MS.gene58463.t1 | AT1G16890 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 3.95e-38 | 127 |
MS.gene58463.t1 | AT3G20060 | 49.194 | 124 | 62 | 1 | 23 | 146 | 10 | 132 | 6.24e-38 | 126 |
MS.gene58463.t1 | AT1G78870 | 40.146 | 137 | 82 | 0 | 7 | 143 | 8 | 144 | 8.64e-38 | 126 |
MS.gene58463.t1 | AT1G64230 | 34.574 | 188 | 76 | 2 | 5 | 150 | 2 | 184 | 2.17e-36 | 124 |
MS.gene58463.t1 | AT1G64230 | 34.574 | 188 | 76 | 2 | 5 | 150 | 2 | 184 | 2.17e-36 | 124 |
MS.gene58463.t1 | AT1G16890 | 38.356 | 146 | 81 | 1 | 7 | 143 | 8 | 153 | 1.50e-35 | 121 |
MS.gene58463.t1 | AT3G57870 | 40.000 | 145 | 80 | 2 | 5 | 142 | 6 | 150 | 9.38e-35 | 119 |
MS.gene58463.t1 | AT5G59300 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 2.11e-33 | 115 |
MS.gene58463.t1 | AT5G25760 | 39.130 | 138 | 80 | 3 | 5 | 138 | 4 | 141 | 5.35e-33 | 114 |
MS.gene58463.t1 | AT5G25760 | 39.130 | 138 | 80 | 3 | 5 | 138 | 4 | 141 | 5.35e-33 | 114 |
MS.gene58463.t1 | AT3G46460 | 39.416 | 137 | 70 | 1 | 25 | 148 | 26 | 162 | 1.04e-32 | 114 |
MS.gene58463.t1 | AT5G41700 | 44.340 | 106 | 59 | 0 | 5 | 110 | 2 | 107 | 1.48e-32 | 113 |
MS.gene58463.t1 | AT3G55380 | 38.686 | 137 | 71 | 1 | 25 | 148 | 27 | 163 | 2.36e-32 | 113 |
MS.gene58463.t1 | AT5G53300 | 45.545 | 101 | 55 | 0 | 5 | 105 | 2 | 102 | 3.52e-32 | 110 |
MS.gene58463.t1 | AT5G56150 | 43.519 | 108 | 61 | 0 | 5 | 112 | 2 | 109 | 1.44e-31 | 109 |
MS.gene58463.t1 | AT3G13550 | 35.766 | 137 | 88 | 0 | 7 | 143 | 39 | 175 | 2.06e-31 | 111 |
MS.gene58463.t1 | AT1G36340 | 46.087 | 115 | 62 | 0 | 31 | 145 | 34 | 148 | 1.32e-30 | 108 |
MS.gene58463.t1 | AT1G36340 | 46.087 | 115 | 62 | 0 | 31 | 145 | 34 | 148 | 1.32e-30 | 108 |
MS.gene58463.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
MS.gene58463.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
MS.gene58463.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
MS.gene58463.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 7 | 142 | 13 | 148 | 2.60e-30 | 110 |
MS.gene58463.t1 | AT1G16890 | 42.593 | 108 | 62 | 0 | 36 | 143 | 4 | 111 | 4.54e-30 | 105 |
MS.gene58463.t1 | AT1G78870 | 40.952 | 105 | 62 | 0 | 7 | 111 | 8 | 112 | 6.63e-30 | 105 |
MS.gene58463.t1 | AT1G78870 | 42.593 | 108 | 62 | 0 | 36 | 143 | 4 | 111 | 1.07e-29 | 105 |
MS.gene58463.t1 | AT1G78870 | 44.118 | 102 | 56 | 1 | 36 | 136 | 4 | 105 | 7.31e-28 | 100 |
MS.gene58463.t1 | AT5G50870 | 35.211 | 142 | 83 | 2 | 10 | 142 | 1 | 142 | 1.96e-27 | 101 |
MS.gene58463.t1 | AT3G13550 | 38.393 | 112 | 69 | 0 | 7 | 118 | 39 | 150 | 1.32e-26 | 98.6 |
MS.gene58463.t1 | AT2G46030 | 30.872 | 149 | 97 | 3 | 1 | 147 | 1 | 145 | 1.66e-26 | 99.0 |
MS.gene58463.t1 | AT2G46030 | 30.872 | 149 | 97 | 3 | 1 | 147 | 1 | 145 | 1.66e-26 | 99.0 |
MS.gene58463.t1 | AT3G24515 | 34.641 | 153 | 87 | 2 | 8 | 147 | 10 | 162 | 3.97e-26 | 102 |
MS.gene58463.t1 | AT3G46460 | 39.823 | 113 | 55 | 1 | 49 | 148 | 8 | 120 | 4.81e-26 | 95.9 |
MS.gene58463.t1 | AT3G46460 | 39.823 | 113 | 55 | 1 | 49 | 148 | 8 | 120 | 4.81e-26 | 95.9 |
MS.gene58463.t1 | AT5G50870 | 37.500 | 128 | 71 | 2 | 10 | 128 | 1 | 128 | 7.06e-26 | 97.8 |
MS.gene58463.t1 | AT2G46030 | 30.872 | 149 | 97 | 3 | 1 | 147 | 73 | 217 | 1.18e-25 | 98.2 |
MS.gene58463.t1 | AT1G63800 | 34.000 | 150 | 91 | 4 | 1 | 147 | 1 | 145 | 1.47e-25 | 96.3 |
MS.gene58463.t1 | AT5G41340 | 34.000 | 150 | 91 | 4 | 1 | 147 | 1 | 145 | 3.72e-25 | 95.5 |
MS.gene58463.t1 | AT3G55380 | 30.409 | 171 | 72 | 2 | 25 | 148 | 27 | 197 | 7.12e-25 | 95.1 |
MS.gene58463.t1 | AT2G46030 | 33.333 | 120 | 78 | 2 | 30 | 147 | 29 | 148 | 1.28e-24 | 94.0 |
MS.gene58463.t1 | AT2G46030 | 33.333 | 120 | 78 | 2 | 30 | 147 | 29 | 148 | 1.28e-24 | 94.0 |
MS.gene58463.t1 | AT1G63800 | 37.037 | 108 | 66 | 2 | 42 | 147 | 23 | 130 | 2.95e-24 | 92.8 |
MS.gene58463.t1 | AT3G24515 | 38.393 | 112 | 65 | 1 | 40 | 147 | 76 | 187 | 1.19e-22 | 92.8 |
MS.gene58463.t1 | AT5G41340 | 36.275 | 102 | 63 | 2 | 48 | 147 | 9 | 110 | 5.53e-22 | 86.3 |
MS.gene58463.t1 | AT4G36800 | 28.472 | 144 | 102 | 1 | 8 | 151 | 34 | 176 | 2.00e-21 | 85.9 |
MS.gene58463.t1 | AT4G36800 | 28.472 | 144 | 102 | 1 | 8 | 151 | 34 | 176 | 2.00e-21 | 85.9 |
MS.gene58463.t1 | AT2G18600 | 30.435 | 138 | 95 | 1 | 8 | 145 | 35 | 171 | 2.81e-21 | 85.5 |
MS.gene58463.t1 | AT2G18600 | 30.435 | 138 | 95 | 1 | 8 | 145 | 35 | 171 | 2.81e-21 | 85.5 |
MS.gene58463.t1 | AT2G32790 | 32.877 | 146 | 93 | 2 | 1 | 143 | 26 | 169 | 4.69e-19 | 79.3 |
MS.gene58463.t1 | AT1G45050 | 36.449 | 107 | 66 | 2 | 1 | 106 | 12 | 117 | 3.73e-16 | 71.2 |
MS.gene58463.t1 | AT1G75440 | 35.849 | 106 | 66 | 2 | 1 | 105 | 12 | 116 | 6.41e-16 | 70.9 |
MS.gene58463.t1 | AT4G36410 | 33.962 | 106 | 68 | 2 | 1 | 105 | 12 | 116 | 1.45e-15 | 69.7 |
MS.gene58463.t1 | AT5G50430 | 30.597 | 134 | 81 | 4 | 7 | 135 | 8 | 134 | 1.73e-15 | 71.2 |
MS.gene58463.t1 | AT5G50430 | 30.597 | 134 | 81 | 4 | 7 | 135 | 8 | 134 | 1.73e-15 | 71.2 |
MS.gene58463.t1 | AT5G42990 | 34.579 | 107 | 68 | 2 | 1 | 106 | 12 | 117 | 3.50e-15 | 68.9 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 7 | 120 | 8 | 122 | 4.18e-15 | 70.1 |
MS.gene58463.t1 | AT1G17280 | 27.273 | 121 | 81 | 1 | 7 | 120 | 8 | 128 | 2.91e-14 | 68.2 |
MS.gene58463.t1 | AT1G53025 | 31.081 | 148 | 81 | 5 | 7 | 133 | 274 | 421 | 6.16e-14 | 68.2 |
MS.gene58463.t1 | AT1G53025 | 31.081 | 148 | 81 | 5 | 7 | 133 | 274 | 421 | 6.43e-14 | 68.2 |
MS.gene58463.t1 | AT3G17000 | 28.467 | 137 | 85 | 4 | 4 | 135 | 11 | 139 | 1.76e-12 | 63.5 |
MS.gene58463.t1 | AT1G45050 | 35.870 | 92 | 57 | 2 | 1 | 91 | 12 | 102 | 6.04e-12 | 59.3 |
MS.gene58463.t1 | AT2G16920 | 30.894 | 123 | 73 | 4 | 7 | 118 | 853 | 974 | 9.00e-12 | 62.4 |
MS.gene58463.t1 | AT2G16920 | 30.894 | 123 | 73 | 4 | 7 | 118 | 853 | 974 | 9.00e-12 | 62.4 |
MS.gene58463.t1 | AT1G53023 | 27.703 | 148 | 86 | 4 | 7 | 133 | 60 | 207 | 1.84e-11 | 60.8 |
Find 42 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGAGTTTGCAGGAGAATT+TGG | 0.151098 | 8.4:+19040186 | None:intergenic |
CTGTGGAATGCTGTTATATT+TGG | 0.236507 | 8.4:-19043261 | MS.gene58463:CDS |
CAGAGTTTGCAGGAGAATTT+GGG | 0.319027 | 8.4:+19040187 | None:intergenic |
TACTGTTTGGATGAAACATT+CGG | 0.376250 | 8.4:+19041829 | None:intergenic |
CGTACAGTGGGTGGCTTGTT+CGG | 0.389561 | 8.4:+19041861 | None:intergenic |
AGGAATTAGTGGTGCTCCTC+AGG | 0.412828 | 8.4:-19043298 | MS.gene58463:CDS |
TGCAGATGGAAGTATTTGTC+TGG | 0.414767 | 8.4:-19041726 | MS.gene58463:CDS |
ACTGTTTGGATGAAACATTC+GGG | 0.426596 | 8.4:+19041830 | None:intergenic |
CTCATCAGTCTCTTCCTAGC+TGG | 0.440813 | 8.4:+19043354 | None:intergenic |
GACCCACCTGCAGGAATTAG+TGG | 0.459602 | 8.4:-19043309 | MS.gene58463:CDS |
TGTGGAATGCTGTTATATTT+GGG | 0.459892 | 8.4:-19043260 | MS.gene58463:intron |
TTTGCAGGAGAATTTGGGTT+GGG | 0.465291 | 8.4:+19040192 | None:intergenic |
TGCGATTCTCACTTCTATCC+AGG | 0.480462 | 8.4:-19041663 | MS.gene58463:intron |
GATAATCCTCGGAAAATTGA+AGG | 0.484718 | 8.4:+19041883 | None:intergenic |
CGAGCCGCTTCAGAGTTTGC+AGG | 0.492725 | 8.4:+19040177 | None:intergenic |
CTCTGAACAGTTTATGCAGA+TGG | 0.494635 | 8.4:-19041740 | MS.gene58463:intron |
TCGTAGAGTGCGGGAAGTTG+TGG | 0.496064 | 8.4:-19040124 | MS.gene58463:CDS |
ATCGCAGCAACATCATATAT+AGG | 0.498248 | 8.4:+19041680 | None:intergenic |
CCATCCCATGGAGTATCATC+AGG | 0.520795 | 8.4:+19043083 | None:intergenic |
CAGAGTTGGACAGCTGACTA+AGG | 0.541375 | 8.4:-19040099 | None:intergenic |
TGAGTACAATCGTAGAGTGC+GGG | 0.565704 | 8.4:-19040133 | MS.gene58463:CDS |
GCAGTCCTGATGATACTCCA+TGG | 0.566145 | 8.4:-19043088 | MS.gene58463:intron |
TTCTCCTGCAAACTCTGAAG+CGG | 0.568993 | 8.4:-19040181 | MS.gene58463:CDS |
TTGCAACATGACCCACCTGC+AGG | 0.570976 | 8.4:-19043318 | MS.gene58463:CDS |
GGAGCACCACTAATTCCTGC+AGG | 0.573494 | 8.4:+19043303 | None:intergenic |
GGGAAGTTGTGGAGCAGAGT+TGG | 0.573831 | 8.4:-19040113 | MS.gene58463:CDS |
TGGCTTGTTCGGATAATCCT+CGG | 0.581252 | 8.4:+19041872 | None:intergenic |
GTTTGCAGGAGAATTTGGGT+TGG | 0.582593 | 8.4:+19040191 | None:intergenic |
GCACCACTAATTCCTGCAGG+TGG | 0.583819 | 8.4:+19043306 | None:intergenic |
CCTGATGATACTCCATGGGA+TGG | 0.589928 | 8.4:-19043083 | MS.gene58463:CDS |
TGGATATATTGCAAAATCAG+TGG | 0.599561 | 8.4:-19041706 | MS.gene58463:CDS |
CGGGAAACAAATCGTACAGT+GGG | 0.600227 | 8.4:+19041849 | None:intergenic |
TATCGATGTCGACTCCAGCT+AGG | 0.611943 | 8.4:-19043368 | None:intergenic |
ACTGACTCACCTCCATCCCA+TGG | 0.613625 | 8.4:+19043071 | None:intergenic |
GAAACAAATCGTACAGTGGG+TGG | 0.628016 | 8.4:+19041852 | None:intergenic |
CACCACTAATTCCTGCAGGT+GGG | 0.640442 | 8.4:+19043307 | None:intergenic |
AGGATAACAATATCATGCTG+TGG | 0.645864 | 8.4:-19043278 | MS.gene58463:CDS |
CAGTCCTGATGATACTCCAT+GGG | 0.646431 | 8.4:-19043087 | MS.gene58463:CDS |
GATGATACTCCATGGGATGG+AGG | 0.662516 | 8.4:-19043080 | MS.gene58463:intron |
GTGAGTACAATCGTAGAGTG+CGG | 0.663013 | 8.4:-19040134 | MS.gene58463:CDS |
AGCATGATATTGTTATCCTG+AGG | 0.673403 | 8.4:+19043282 | None:intergenic |
TCGGGAAACAAATCGTACAG+TGG | 0.686954 | 8.4:+19041848 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAATATTGAAAAACAA+AGG | + | chr8.4:19041273-19041292 | None:intergenic | 10.0% |
!! | TTAGATTAATGAAAATTAAA+TGG | - | chr8.4:19042101-19042120 | MS.gene58463:intron | 10.0% |
!!! | AATATTTTTTTTTTTTGTCA+AGG | - | chr8.4:19040704-19040723 | MS.gene58463:intron | 10.0% |
!! | TCCAAATACAATAATATAAT+GGG | + | chr8.4:19043114-19043133 | None:intergenic | 15.0% |
!! | TTCCAAATACAATAATATAA+TGG | + | chr8.4:19043115-19043134 | None:intergenic | 15.0% |
!!! | AGTTTTTTAAAATCTAAAAC+TGG | - | chr8.4:19041206-19041225 | MS.gene58463:intron | 15.0% |
!! | AAAAAAATTAAGAGCAATCT+CGG | + | chr8.4:19041053-19041072 | None:intergenic | 20.0% |
!! | AAATAAGTATGCTAAACAAA+GGG | + | chr8.4:19042394-19042413 | None:intergenic | 20.0% |
!! | AAGTTTGATTCTATTTAGTA+TGG | + | chr8.4:19043159-19043178 | None:intergenic | 20.0% |
!! | TATCATTTGATATTTCACAT+AGG | + | chr8.4:19042868-19042887 | None:intergenic | 20.0% |
!! | TCCCATTATATTATTGTATT+TGG | - | chr8.4:19043110-19043129 | MS.gene58463:intron | 20.0% |
!! | TTGTTCTGACTTATAAATTA+TGG | + | chr8.4:19042014-19042033 | None:intergenic | 20.0% |
!!! | AATACAATAATATAATGGGA+TGG | + | chr8.4:19043110-19043129 | None:intergenic | 20.0% |
!!! | ACTTTGTTTAAGTATATGAA+TGG | - | chr8.4:19040316-19040335 | MS.gene58463:intron | 20.0% |
!!! | AGATGTAATAATTTTCTTTG+TGG | - | chr8.4:19043043-19043062 | MS.gene58463:intron | 20.0% |
!!! | ATACAATAATATAATGGGAT+GGG | + | chr8.4:19043109-19043128 | None:intergenic | 20.0% |
!!! | GATTGCTCTTAATTTTTTTT+AGG | - | chr8.4:19041054-19041073 | MS.gene58463:intron | 20.0% |
!!! | GTATATATTTTGAGTTATTC+AGG | - | chr8.4:19041543-19041562 | MS.gene58463:intron | 20.0% |
!!! | TTAATTCTCATTTTTCAAAG+AGG | + | chr8.4:19042761-19042780 | None:intergenic | 20.0% |
! | AAAAAATTAAGAGCAATCTC+GGG | + | chr8.4:19041052-19041071 | None:intergenic | 25.0% |
! | AAAACTACAAAAAGCAATAC+AGG | + | chr8.4:19042530-19042549 | None:intergenic | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | + | chr8.4:19040738-19040757 | None:intergenic | 25.0% |
! | AATACTTGTAACACACAAAA+TGG | + | chr8.4:19040481-19040500 | None:intergenic | 25.0% |
! | AATTGCAGGTTATTGAAAAA+TGG | + | chr8.4:19043002-19043021 | None:intergenic | 25.0% |
! | ATCAAAACATGTTGTACATT+TGG | - | chr8.4:19041416-19041435 | MS.gene58463:intron | 25.0% |
! | ATTAAATGGAAATGCCAAAT+AGG | - | chr8.4:19042115-19042134 | MS.gene58463:intron | 25.0% |
! | GAAATAAGTATGCTAAACAA+AGG | + | chr8.4:19042395-19042414 | None:intergenic | 25.0% |
! | TATAATCAATGAGATACACA+TGG | - | chr8.4:19042044-19042063 | MS.gene58463:intron | 25.0% |
! | TCAAAACATGTTGTACATTT+GGG | - | chr8.4:19041417-19041436 | MS.gene58463:intron | 25.0% |
! | TTAAATGGAAATGCCAAATA+GGG | - | chr8.4:19042116-19042135 | MS.gene58463:intron | 25.0% |
! | TTATTGTATTTGGAAGTTTC+CGG | - | chr8.4:19043120-19043139 | MS.gene58463:intron | 25.0% |
! | TTGAATAGTAAAGTCCAATT+TGG | - | chr8.4:19040526-19040545 | MS.gene58463:intron | 25.0% |
!! | AAAATCTTTTATAGGATGGA+AGG | + | chr8.4:19041147-19041166 | None:intergenic | 25.0% |
!! | TCCATCCTATAAAAGATTTT+GGG | - | chr8.4:19041147-19041166 | MS.gene58463:intron | 25.0% |
!! | TTCCATCCTATAAAAGATTT+TGG | - | chr8.4:19041146-19041165 | MS.gene58463:intron | 25.0% |
!! | TTTTTATACTAGTGTCAGTT+AGG | - | chr8.4:19040447-19040466 | MS.gene58463:intron | 25.0% |
!!! | AATTTTAAGACTGTTTTGGA+GGG | - | chr8.4:19042701-19042720 | MS.gene58463:intron | 25.0% |
!!! | TACAACATGTTTTGATTTGA+TGG | + | chr8.4:19041412-19041431 | None:intergenic | 25.0% |
AAAACATGTTGTACATTTGG+GGG | - | chr8.4:19041419-19041438 | MS.gene58463:intron | 30.0% | |
AAAGGGAATCATTTCAAAAC+AGG | + | chr8.4:19042178-19042197 | None:intergenic | 30.0% | |
AAGGGAATCATTTCAAAACA+GGG | + | chr8.4:19042177-19042196 | None:intergenic | 30.0% | |
ACACTATACTAAATGATACC+TGG | + | chr8.4:19041822-19041841 | None:intergenic | 30.0% | |
AGAAAATAATCACACAATGC+TGG | + | chr8.4:19043211-19043230 | None:intergenic | 30.0% | |
ATGTTAATATTAGCCGAACT+TGG | - | chr8.4:19041079-19041098 | MS.gene58463:intron | 30.0% | |
CAAAACATGTTGTACATTTG+GGG | - | chr8.4:19041418-19041437 | MS.gene58463:intron | 30.0% | |
CCAATTCTCATCAAAGAAAT+TGG | + | chr8.4:19042249-19042268 | None:intergenic | 30.0% | |
CCAATTTCTTTGATGAGAAT+TGG | - | chr8.4:19042246-19042265 | MS.gene58463:intron | 30.0% | |
GAAAAAGACAGTAAACTTTG+TGG | + | chr8.4:19042654-19042673 | None:intergenic | 30.0% | |
GAAAGAGAAATCTACAAAAC+AGG | + | chr8.4:19042570-19042589 | None:intergenic | 30.0% | |
TACTGTTTGGATGAAACATT+CGG | + | chr8.4:19041638-19041657 | None:intergenic | 30.0% | |
TATGTTGCAAAGAACATCAT+AGG | - | chr8.4:19041121-19041140 | MS.gene58463:intron | 30.0% | |
TATTGTATTTGGAAGTTTCC+GGG | - | chr8.4:19043121-19043140 | MS.gene58463:intron | 30.0% | |
TCATCCAAACAGTAAGTATT+AGG | - | chr8.4:19041644-19041663 | MS.gene58463:intron | 30.0% | |
TCTTAAGTCTGATATGCAAA+TGG | - | chr8.4:19042458-19042477 | MS.gene58463:intron | 30.0% | |
TGAGAATTAAACCTGTTATG+AGG | - | chr8.4:19042771-19042790 | MS.gene58463:intron | 30.0% | |
TGATATGCAAGTATTCAATG+TGG | - | chr8.4:19042948-19042967 | MS.gene58463:intron | 30.0% | |
TGGATATATTGCAAAATCAG+TGG | - | chr8.4:19041758-19041777 | MS.gene58463:intron | 30.0% | |
TGTGGAAAACAAACATAACA+AGG | + | chr8.4:19042636-19042655 | None:intergenic | 30.0% | |
TGTGGAATGCTGTTATATTT+GGG | - | chr8.4:19040204-19040223 | MS.gene58463:CDS | 30.0% | |
TTCTCATCAAAGAAATTGGA+AGG | + | chr8.4:19042245-19042264 | None:intergenic | 30.0% | |
TTGAACTGTGCAATTCATAT+TGG | - | chr8.4:19042302-19042321 | MS.gene58463:intron | 30.0% | |
! | ACCCAAAATCTTTTATAGGA+TGG | + | chr8.4:19041151-19041170 | None:intergenic | 30.0% |
! | AGCAACCCAAAATCTTTTAT+AGG | + | chr8.4:19041155-19041174 | None:intergenic | 30.0% |
! | AGTTCCTCGCATTTTATATA+GGG | - | chr8.4:19040607-19040626 | MS.gene58463:intron | 30.0% |
! | ATCTCATTGATTATATGCTC+TGG | + | chr8.4:19042039-19042058 | None:intergenic | 30.0% |
! | CAAAGTTTACTGTCTTTTTC+TGG | - | chr8.4:19042654-19042673 | MS.gene58463:intron | 30.0% |
! | TAACCCTCAGATTTTCATAT+GGG | + | chr8.4:19040679-19040698 | None:intergenic | 30.0% |
! | TTAACCCTCAGATTTTCATA+TGG | + | chr8.4:19040680-19040699 | None:intergenic | 30.0% |
!! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr8.4:19040992-19041011 | None:intergenic | 30.0% |
!! | ATTTTGTCTGAGACTGAATT+GGG | + | chr8.4:19040573-19040592 | None:intergenic | 30.0% |
!! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr8.4:19040991-19041010 | None:intergenic | 30.0% |
!! | TATTTTGTCTGAGACTGAAT+TGG | + | chr8.4:19040574-19040593 | None:intergenic | 30.0% |
!!! | AGGGAATTTTAAGACTGTTT+TGG | - | chr8.4:19042697-19042716 | MS.gene58463:intron | 30.0% |
!!! | ATTTTAAGACTGTTTTGGAG+GGG | - | chr8.4:19042702-19042721 | MS.gene58463:intron | 30.0% |
!!! | GAATTTTAAGACTGTTTTGG+AGG | - | chr8.4:19042700-19042719 | MS.gene58463:intron | 30.0% |
!!! | TTTTTTTTGTCAAGGACTGA+AGG | - | chr8.4:19040712-19040731 | MS.gene58463:intron | 30.0% |
AAAGCAATACAGGAGAAAGA+AGG | + | chr8.4:19042520-19042539 | None:intergenic | 35.0% | |
AAATGCCAAATAGGGTGAAT+GGG | - | chr8.4:19042124-19042143 | MS.gene58463:intron | 35.0% | |
AAGCAATACAGGAGAAAGAA+GGG | + | chr8.4:19042519-19042538 | None:intergenic | 35.0% | |
AATGCTGGTCAATACATAAC+AGG | + | chr8.4:19043196-19043215 | None:intergenic | 35.0% | |
AATTCCCTAGTAAACAGAAG+TGG | + | chr8.4:19042685-19042704 | None:intergenic | 35.0% | |
ACTGTAATATCTGCCAATGA+TGG | + | chr8.4:19042834-19042853 | None:intergenic | 35.0% | |
ACTGTTTGGATGAAACATTC+GGG | + | chr8.4:19041637-19041656 | None:intergenic | 35.0% | |
ACTTAAACTGTTCAGTGCAA+AGG | + | chr8.4:19042214-19042233 | None:intergenic | 35.0% | |
AGAGAAATCTACAAAACAGG+AGG | + | chr8.4:19042567-19042586 | None:intergenic | 35.0% | |
AGAGCAGCAATTACATTAGT+TGG | + | chr8.4:19041708-19041727 | None:intergenic | 35.0% | |
AGCATGATATTGTTATCCTG+AGG | + | chr8.4:19040185-19040204 | None:intergenic | 35.0% | |
AGGATAACAATATCATGCTG+TGG | - | chr8.4:19040186-19040205 | MS.gene58463:CDS | 35.0% | |
AGGGAATCATTTCAAAACAG+GGG | + | chr8.4:19042176-19042195 | None:intergenic | 35.0% | |
ATATCACACTCTTGCATCAA+GGG | + | chr8.4:19042934-19042953 | None:intergenic | 35.0% | |
ATCGCAGCAACATCATATAT+AGG | + | chr8.4:19041787-19041806 | None:intergenic | 35.0% | |
ATTCCCTAGTAAACAGAAGT+GGG | + | chr8.4:19042684-19042703 | None:intergenic | 35.0% | |
ATTGTATTTGGAAGTTTCCG+GGG | - | chr8.4:19043122-19043141 | MS.gene58463:intron | 35.0% | |
CAAAGCAATGACTGTCAAAA+AGG | + | chr8.4:19043248-19043267 | None:intergenic | 35.0% | |
CTGTGGAATGCTGTTATATT+TGG | - | chr8.4:19040203-19040222 | MS.gene58463:CDS | 35.0% | |
CTTAAACTGTTCAGTGCAAA+GGG | + | chr8.4:19042213-19042232 | None:intergenic | 35.0% | |
GACACAACTAACAGATAAGA+AGG | + | chr8.4:19041683-19041702 | None:intergenic | 35.0% | |
GATAATCCTCGGAAAATTGA+AGG | + | chr8.4:19041584-19041603 | None:intergenic | 35.0% | |
GCTTGCAACCTAAAAATCTA+AGG | - | chr8.4:19042605-19042624 | MS.gene58463:intron | 35.0% | |
TATAGCACAAGCGATTATCA+TGG | - | chr8.4:19040765-19040784 | MS.gene58463:intron | 35.0% | |
TCCAAACAGTAAGTATTAGG+TGG | - | chr8.4:19041647-19041666 | MS.gene58463:intron | 35.0% | |
TCCACCTAATACTTACTGTT+TGG | + | chr8.4:19041651-19041670 | None:intergenic | 35.0% | |
TCTCCCATATGAAAATCTGA+GGG | - | chr8.4:19040673-19040692 | MS.gene58463:intron | 35.0% | |
TGTACCCTATATAAAATGCG+AGG | + | chr8.4:19040614-19040633 | None:intergenic | 35.0% | |
TTAAACTGTTCAGTGCAAAG+GGG | + | chr8.4:19042212-19042231 | None:intergenic | 35.0% | |
TTAAATCAGCCAATCCAAAC+AGG | - | chr8.4:19041026-19041045 | MS.gene58463:intron | 35.0% | |
TTCTGTAGTTTCTTTGTTCG+TGG | - | chr8.4:19042412-19042431 | MS.gene58463:intron | 35.0% | |
! | AGGCTCTTCCTTAGATTTTT+AGG | + | chr8.4:19042616-19042635 | None:intergenic | 35.0% |
! | ATGCCATCTAAAACCAAGTT+CGG | + | chr8.4:19041095-19041114 | None:intergenic | 35.0% |
! | CAGTTCCTCGCATTTTATAT+AGG | - | chr8.4:19040606-19040625 | MS.gene58463:intron | 35.0% |
! | GCTTTAATGTTTTCCTGTGT+GGG | - | chr8.4:19042891-19042910 | MS.gene58463:intron | 35.0% |
!! | TAAAACTGGCTTCTGTTTTG+TGG | - | chr8.4:19041220-19041239 | MS.gene58463:intron | 35.0% |
AAAGGGGGGTTGAAGAAAAA+AGG | + | chr8.4:19042196-19042215 | None:intergenic | 40.0% | |
AAGGGGGGTTGAAGAAAAAA+GGG | + | chr8.4:19042195-19042214 | None:intergenic | 40.0% | |
AATGCCAAATAGGGTGAATG+GGG | - | chr8.4:19042125-19042144 | MS.gene58463:intron | 40.0% | |
AGCAATACAGGAGAAAGAAG+GGG | + | chr8.4:19042518-19042537 | None:intergenic | 40.0% | |
ATTGGGCCGTAAGAAAAATG+CGG | + | chr8.4:19040556-19040575 | None:intergenic | 40.0% | |
CAATTACTCAGCTTCTACAC+TGG | - | chr8.4:19043017-19043036 | MS.gene58463:intron | 40.0% | |
CAGAGTTTGCAGGAGAATTT+GGG | + | chr8.4:19043280-19043299 | None:intergenic | 40.0% | |
CATATCACACTCTTGCATCA+AGG | + | chr8.4:19042935-19042954 | None:intergenic | 40.0% | |
CCCTCTATCATTATAGCAGA+GGG | - | chr8.4:19040641-19040660 | MS.gene58463:intron | 40.0% | |
CCCTCTGCTATAATGATAGA+GGG | + | chr8.4:19040644-19040663 | None:intergenic | 40.0% | |
CTCTGAACAGTTTATGCAGA+TGG | - | chr8.4:19041724-19041743 | MS.gene58463:CDS | 40.0% | |
GAAATGCCAAATAGGGTGAA+TGG | - | chr8.4:19042123-19042142 | MS.gene58463:intron | 40.0% | |
GCTGTTATATTTGGGTGAGT+TGG | - | chr8.4:19040212-19040231 | MS.gene58463:intron | 40.0% | |
GTATGGAGATAAAAGTTCCC+CGG | + | chr8.4:19043142-19043161 | None:intergenic | 40.0% | |
GTCTCCCATATGAAAATCTG+AGG | - | chr8.4:19040672-19040691 | MS.gene58463:intron | 40.0% | |
TAAACTGTTCAGTGCAAAGG+GGG | + | chr8.4:19042211-19042230 | None:intergenic | 40.0% | |
TATGAATGACTCTGCGATGA+AGG | - | chr8.4:19042071-19042090 | MS.gene58463:intron | 40.0% | |
TCAGAGTTTGCAGGAGAATT+TGG | + | chr8.4:19043281-19043300 | None:intergenic | 40.0% | |
TCCCTCTATCATTATAGCAG+AGG | - | chr8.4:19040640-19040659 | MS.gene58463:intron | 40.0% | |
TCCCTCTGCTATAATGATAG+AGG | + | chr8.4:19040645-19040664 | None:intergenic | 40.0% | |
TCTCCCACTTCTGTTTACTA+GGG | - | chr8.4:19042678-19042697 | MS.gene58463:intron | 40.0% | |
TGTAGAAGCTGAGTAATTGC+AGG | + | chr8.4:19043016-19043035 | None:intergenic | 40.0% | |
TTCTCCCACTTCTGTTTACT+AGG | - | chr8.4:19042677-19042696 | MS.gene58463:intron | 40.0% | |
! | CGCTTTAATGTTTTCCTGTG+TGG | - | chr8.4:19042890-19042909 | MS.gene58463:intron | 40.0% |
! | TTTGCAGGAGAATTTGGGTT+GGG | + | chr8.4:19043275-19043294 | None:intergenic | 40.0% |
!! | TGCAGATGGAAGTATTTGTC+TGG | - | chr8.4:19041738-19041757 | MS.gene58463:intron | 40.0% |
!!! | GATTTTGGGTTGCTCTAGAT+AGG | - | chr8.4:19041161-19041180 | MS.gene58463:intron | 40.0% |
!!! | TAGCCGAACTTGGTTTTAGA+TGG | - | chr8.4:19041089-19041108 | MS.gene58463:intron | 40.0% |
AAAAATGCGGGGGACCAAAT+TGG | + | chr8.4:19040543-19040562 | None:intergenic | 45.0% | |
AAACTGTTCAGTGCAAAGGG+GGG | + | chr8.4:19042210-19042229 | None:intergenic | 45.0% | |
ACTATCAGCACACAGTCCTT+TGG | + | chr8.4:19042803-19042822 | None:intergenic | 45.0% | |
ATAGTCTGCAAGGCCATCAT+TGG | - | chr8.4:19042818-19042837 | MS.gene58463:intron | 45.0% | |
CAGTCCTGATGATACTCCAT+GGG | - | chr8.4:19040377-19040396 | MS.gene58463:intron | 45.0% | |
CGGGAAACAAATCGTACAGT+GGG | + | chr8.4:19041618-19041637 | None:intergenic | 45.0% | |
CTATCAGCACACAGTCCTTT+GGG | + | chr8.4:19042802-19042821 | None:intergenic | 45.0% | |
CTCTGCTTTCTTGTCTGCTT+TGG | - | chr8.4:19040350-19040369 | MS.gene58463:intron | 45.0% | |
GAAACAAATCGTACAGTGGG+TGG | + | chr8.4:19041615-19041634 | None:intergenic | 45.0% | |
GAGTCAGGAAGACGAAGATT+AGG | + | chr8.4:19043073-19043092 | None:intergenic | 45.0% | |
GCAATACAGGAGAAAGAAGG+GGG | + | chr8.4:19042517-19042536 | None:intergenic | 45.0% | |
GGATGTTAAAGAGTGGAGTC+AGG | + | chr8.4:19043088-19043107 | None:intergenic | 45.0% | |
GTGAGTACAATCGTAGAGTG+CGG | - | chr8.4:19043330-19043349 | MS.gene58463:CDS | 45.0% | |
GTGCAAATGTAGCCTGTAAC+AGG | + | chr8.4:19041338-19041357 | None:intergenic | 45.0% | |
GTTTGCAGGAGAATTTGGGT+TGG | + | chr8.4:19043276-19043295 | None:intergenic | 45.0% | |
TCGGGAAACAAATCGTACAG+TGG | + | chr8.4:19041619-19041638 | None:intergenic | 45.0% | |
TGAAGGGTCAACTAGCTGAA+AGG | - | chr8.4:19042728-19042747 | MS.gene58463:intron | 45.0% | |
TGAGTACAATCGTAGAGTGC+GGG | - | chr8.4:19043331-19043350 | MS.gene58463:CDS | 45.0% | |
TGCGATTCTCACTTCTATCC+AGG | - | chr8.4:19041801-19041820 | MS.gene58463:intron | 45.0% | |
TGGGATGGGATGTTAAAGAG+TGG | + | chr8.4:19043095-19043114 | None:intergenic | 45.0% | |
TTCTTTGTTCGTGGCTGCTA+AGG | - | chr8.4:19042421-19042440 | MS.gene58463:intron | 45.0% | |
TTGGGCCGTAAGAAAAATGC+GGG | + | chr8.4:19040555-19040574 | None:intergenic | 45.0% | |
! | GTTGAGCCTTCAATTTTCCG+AGG | - | chr8.4:19041575-19041594 | MS.gene58463:intron | 45.0% |
! | TGTTATGAGGTGCTTCCCAA+AGG | - | chr8.4:19042784-19042803 | MS.gene58463:intron | 45.0% |
! | TGTTTTCCTGTGTGGGATCA+CGG | - | chr8.4:19042898-19042917 | MS.gene58463:intron | 45.0% |
! | TTCTCCTGCAAACTCTGAAG+CGG | - | chr8.4:19043283-19043302 | MS.gene58463:CDS | 45.0% |
! | TTTGGGATGAAAACAGCGCA+TGG | + | chr8.4:19040974-19040993 | None:intergenic | 45.0% |
!! | TGGCTTGTTCGGATAATCCT+CGG | + | chr8.4:19041595-19041614 | None:intergenic | 45.0% |
!! | TTTGGGAAGCACCTCATAAC+AGG | + | chr8.4:19042785-19042804 | None:intergenic | 45.0% |
!!! | TGTTTTGGAGGGGTTGTGAA+GGG | - | chr8.4:19042712-19042731 | MS.gene58463:intron | 45.0% |
AATCTCGGGCCTGTTTGGAT+TGG | + | chr8.4:19041038-19041057 | None:intergenic | 50.0% | |
AGGAATTAGTGGTGCTCCTC+AGG | - | chr8.4:19040166-19040185 | MS.gene58463:CDS | 50.0% | |
CACCACTAATTCCTGCAGGT+GGG | + | chr8.4:19040160-19040179 | None:intergenic | 50.0% | |
CCTGATGATACTCCATGGGA+TGG | - | chr8.4:19040381-19040400 | MS.gene58463:intron | 50.0% | |
CTCACCCCATTCACCCTATT+TGG | + | chr8.4:19042132-19042151 | None:intergenic | 50.0% | |
CTCATCAGTCTCTTCCTAGC+TGG | + | chr8.4:19040113-19040132 | None:intergenic | 50.0% | |
GATGATACTCCATGGGATGG+AGG | - | chr8.4:19040384-19040403 | MS.gene58463:intron | 50.0% | |
GCAGTCCTGATGATACTCCA+TGG | - | chr8.4:19040376-19040395 | MS.gene58463:intron | 50.0% | |
TCAAGGACTGAAGGCCTGTT+TGG | - | chr8.4:19040721-19040740 | MS.gene58463:intron | 50.0% | |
TGGGCCGTAAGAAAAATGCG+GGG | + | chr8.4:19040554-19040573 | None:intergenic | 50.0% | |
! | CCATCCCATGGAGTATCATC+AGG | + | chr8.4:19040384-19040403 | None:intergenic | 50.0% |
! | CTCTTGCATCAAGGGCACAT+TGG | + | chr8.4:19042926-19042945 | None:intergenic | 50.0% |
! | CTGTGTGCTGATAGTCTGCA+AGG | - | chr8.4:19042808-19042827 | MS.gene58463:intron | 50.0% |
! | GGTCCCCCGCATTTTTCTTA+CGG | - | chr8.4:19040547-19040566 | MS.gene58463:intron | 50.0% |
!!! | CTGTTTTGGAGGGGTTGTGA+AGG | - | chr8.4:19042711-19042730 | MS.gene58463:intron | 50.0% |
AGAGCAATCTCGGGCCTGTT+TGG | + | chr8.4:19041043-19041062 | None:intergenic | 55.0% | |
CTACCTGATGCGCCTGTTAC+AGG | - | chr8.4:19041323-19041342 | MS.gene58463:intron | 55.0% | |
GACCCACCTGCAGGAATTAG+TGG | - | chr8.4:19040155-19040174 | MS.gene58463:CDS | 55.0% | |
GCACCACTAATTCCTGCAGG+TGG | + | chr8.4:19040161-19040180 | None:intergenic | 55.0% | |
GGGAAGTTGTGGAGCAGAGT+TGG | - | chr8.4:19043351-19043370 | MS.gene58463:CDS | 55.0% | |
GGGCCGTAAGAAAAATGCGG+GGG | + | chr8.4:19040553-19040572 | None:intergenic | 55.0% | |
TAGCCTGTAACAGGCGCATC+AGG | + | chr8.4:19041329-19041348 | None:intergenic | 55.0% | |
TCGTAGAGTGCGGGAAGTTG+TGG | - | chr8.4:19043340-19043359 | MS.gene58463:CDS | 55.0% | |
TTGCAACATGACCCACCTGC+AGG | - | chr8.4:19040146-19040165 | MS.gene58463:CDS | 55.0% | |
TTGGAACCGTGATCCCACAC+AGG | + | chr8.4:19042907-19042926 | None:intergenic | 55.0% | |
! | ACTGACTCACCTCCATCCCA+TGG | + | chr8.4:19040396-19040415 | None:intergenic | 55.0% |
! | GGAGCACCACTAATTCCTGC+AGG | + | chr8.4:19040164-19040183 | None:intergenic | 55.0% |
!! | CGTACAGTGGGTGGCTTGTT+CGG | + | chr8.4:19041606-19041625 | None:intergenic | 55.0% |
CGAGCCGCTTCAGAGTTTGC+AGG | + | chr8.4:19043290-19043309 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 19040101 | 19043385 | 19040101 | ID=MS.gene58463 |
chr8.4 | mRNA | 19040101 | 19043385 | 19040101 | ID=MS.gene58463.t1;Parent=MS.gene58463 |
chr8.4 | exon | 19043261 | 19043385 | 19043261 | ID=MS.gene58463.t1.exon1;Parent=MS.gene58463.t1 |
chr8.4 | CDS | 19043261 | 19043385 | 19043261 | ID=cds.MS.gene58463.t1;Parent=MS.gene58463.t1 |
chr8.4 | exon | 19043081 | 19043106 | 19043081 | ID=MS.gene58463.t1.exon2;Parent=MS.gene58463.t1 |
chr8.4 | CDS | 19043081 | 19043106 | 19043081 | ID=cds.MS.gene58463.t1;Parent=MS.gene58463.t1 |
chr8.4 | exon | 19041832 | 19041921 | 19041832 | ID=MS.gene58463.t1.exon3;Parent=MS.gene58463.t1 |
chr8.4 | CDS | 19041832 | 19041921 | 19041832 | ID=cds.MS.gene58463.t1;Parent=MS.gene58463.t1 |
chr8.4 | exon | 19041664 | 19041752 | 19041664 | ID=MS.gene58463.t1.exon4;Parent=MS.gene58463.t1 |
chr8.4 | CDS | 19041664 | 19041752 | 19041664 | ID=cds.MS.gene58463.t1;Parent=MS.gene58463.t1 |
chr8.4 | exon | 19040101 | 19040229 | 19040101 | ID=MS.gene58463.t1.exon5;Parent=MS.gene58463.t1 |
chr8.4 | CDS | 19040101 | 19040229 | 19040101 | ID=cds.MS.gene58463.t1;Parent=MS.gene58463.t1 |
Gene Sequence |
Protein sequence |