Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59875.t1 | XP_003628241.1 | 100 | 173 | 0 | 0 | 1 | 173 | 146 | 318 | 9.50E-96 | 359.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59875.t1 | G7L8J3 | 100.0 | 173 | 0 | 0 | 1 | 173 | 146 | 318 | 6.8e-96 | 359.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene59875 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene59875 | 0.835642 | 1.49E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene59875 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene050330 | MS.gene59875 | -0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene050438 | MS.gene59875 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene59875 | 0.802208 | 6.26E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene59875 | 0.80512 | 1.56E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene59875 | 0.80048 | 1.41E-48 | -1.69E-46 |
| MS.gene051663 | MS.gene59875 | 0.819582 | 1.08E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene59875 | 0.809788 | 1.59E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene59875 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene59875 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene59875 | 0.810316 | 1.22E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene59875 | 0.830092 | 3.57E-55 | -1.69E-46 |
| MS.gene054185 | MS.gene59875 | 0.805506 | 1.29E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene59875 | -0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene057260 | MS.gene59875 | 0.815312 | 9.86E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene59875 | 0.800895 | 1.16E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene59875 | 0.806151 | 9.46E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene59875 | 0.821223 | 4.53E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene59875 | 0.809832 | 1.56E-50 | -1.69E-46 |
| MS.gene060476 | MS.gene59875 | 0.806647 | 7.43E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59875.t1 | MTR_8g046180 | 100.000 | 173 | 0 | 0 | 1 | 173 | 146 | 318 | 1.63e-127 | 360 |
| MS.gene59875.t1 | MTR_8g046180 | 98.582 | 141 | 2 | 0 | 1 | 141 | 146 | 286 | 7.55e-101 | 292 |
| MS.gene59875.t1 | MTR_6g004030 | 44.509 | 173 | 96 | 0 | 1 | 173 | 129 | 301 | 1.90e-53 | 172 |
| MS.gene59875.t1 | MTR_8g046180 | 100.000 | 75 | 0 | 0 | 1 | 75 | 146 | 220 | 7.24e-51 | 163 |
| MS.gene59875.t1 | MTR_6g004030 | 44.828 | 116 | 64 | 0 | 1 | 116 | 129 | 244 | 3.70e-32 | 115 |
| MS.gene59875.t1 | MTR_8g446720 | 74.000 | 50 | 12 | 1 | 124 | 173 | 8 | 56 | 1.27e-17 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59875.t1 | AT4G29400 | 77.457 | 173 | 39 | 0 | 1 | 173 | 130 | 302 | 7.44e-100 | 290 |
| MS.gene59875.t1 | AT5G08400 | 45.087 | 173 | 95 | 0 | 1 | 173 | 128 | 300 | 4.75e-53 | 171 |
| MS.gene59875.t1 | AT5G08400 | 45.087 | 173 | 95 | 0 | 1 | 173 | 161 | 333 | 8.77e-53 | 171 |
Find 26 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTACTTGCATGTTCA+TGG | 0.294111 | 8.3:+53438525 | None:intergenic |
| ACCAAGTTACGATTATATTC+AGG | 0.316714 | 8.3:-53438361 | MS.gene59875:CDS |
| GATTTAACATCAGAGGATTC+AGG | 0.317872 | 8.3:-53437907 | MS.gene59875:CDS |
| ACATCAGAGGATTCAGGTTA+TGG | 0.330697 | 8.3:-53437901 | MS.gene59875:CDS |
| GTGGAGAAGAATTTGAGAAT+TGG | 0.339234 | 8.3:-53437936 | MS.gene59875:CDS |
| TGATATAACAGGATAGATAT+TGG | 0.346310 | 8.3:-53438170 | MS.gene59875:intron |
| TTATTAAATGACACTTTCAT+TGG | 0.357016 | 8.3:+53443002 | None:intergenic |
| AAGACAACTTGGCTCGAATA+TGG | 0.374877 | 8.3:-53438287 | MS.gene59875:intron |
| ATCAAAACATCTAGAATCAA+TGG | 0.409600 | 8.3:+53438137 | None:intergenic |
| AAAATACTCCACACAAAGAC+TGG | 0.415066 | 8.3:-53443035 | MS.gene59875:CDS |
| AGAATTTGAGAATTGGAAAG+AGG | 0.431631 | 8.3:-53437929 | MS.gene59875:CDS |
| CCCTGAATATAATCGTAACT+TGG | 0.440268 | 8.3:+53438360 | None:intergenic |
| GATATAACAGGATAGATATT+GGG | 0.451457 | 8.3:-53438169 | MS.gene59875:intron |
| CCAAGTTACGATTATATTCA+GGG | 0.463616 | 8.3:-53438360 | MS.gene59875:CDS |
| CTCCACACAAAGACTGGATC+AGG | 0.466440 | 8.3:-53443029 | MS.gene59875:CDS |
| ATTCGAGCATGGCACATTGT+AGG | 0.492114 | 8.3:-53438568 | MS.gene59875:CDS |
| GGGATCAAGCAAGTAGTGTT+TGG | 0.510754 | 8.3:-53437958 | MS.gene59875:CDS |
| TCTTGAGGTTCAAGACAACT+TGG | 0.535517 | 8.3:-53438298 | MS.gene59875:CDS |
| TTACAACATTGGGGATCTTG+AGG | 0.541473 | 8.3:-53438313 | MS.gene59875:CDS |
| CCAATGTTGTAAAATGTAGT+TGG | 0.552417 | 8.3:+53438324 | None:intergenic |
| CTCCTGATCCAGTCTTTGTG+TGG | 0.562273 | 8.3:+53443027 | None:intergenic |
| ATCAAGCAAGTAGTGTTTGG+TGG | 0.565132 | 8.3:-53437955 | MS.gene59875:CDS |
| GAAAGAGGATTTAACATCAG+AGG | 0.565258 | 8.3:-53437914 | MS.gene59875:CDS |
| CTTTGCAGGCTATTCGAGCA+TGG | 0.569213 | 8.3:-53438579 | MS.gene59875:intron |
| TGGCACATTGTAGGACGACT+TGG | 0.571804 | 8.3:-53438559 | MS.gene59875:CDS |
| CACATTGTAGGACGACTTGG+AGG | 0.594434 | 8.3:-53438556 | MS.gene59875:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCAATATAGATATTTA+TGG | + | chr8.3:53440084-53440103 | None:intergenic | 10.0% |
| !! | ATATCAATATAGATATTTAT+GGG | + | chr8.3:53440083-53440102 | None:intergenic | 10.0% |
| !!! | AAATTTTTAAAAAAAAGTCT+TGG | + | chr8.3:53442067-53442086 | None:intergenic | 10.0% |
| !! | AAAATTCACTATAAATAGAA+AGG | + | chr8.3:53442498-53442517 | None:intergenic | 15.0% |
| !! | AATAATTTGACTAATCATAT+AGG | + | chr8.3:53441502-53441521 | None:intergenic | 15.0% |
| !! | AATATCTATATTGATATTAG+AGG | - | chr8.3:53440086-53440105 | MS.gene59875:intron | 15.0% |
| !! | ATAGAAATAAGCATTTAAAT+AGG | - | chr8.3:53438618-53438637 | MS.gene59875:intron | 15.0% |
| !! | TAAATAGAAAGTTAGAAATA+TGG | - | chr8.3:53439927-53439946 | MS.gene59875:intron | 15.0% |
| !!! | ATTTATTTTTGTGATATAAC+AGG | - | chr8.3:53442769-53442788 | MS.gene59875:intron | 15.0% |
| !!! | ATTTTTCAAACTCATATATA+TGG | - | chr8.3:53442208-53442227 | MS.gene59875:intron | 15.0% |
| !! | AAAAAACCAGATCAATTAAT+TGG | + | chr8.3:53442953-53442972 | None:intergenic | 20.0% |
| !! | AACAATAATCATATGGTTTA+GGG | - | chr8.3:53438923-53438942 | MS.gene59875:intron | 20.0% |
| !! | AATTATATTGCTTATAGAAC+TGG | - | chr8.3:53442526-53442545 | MS.gene59875:intron | 20.0% |
| !! | AGTACTTTGAATTACAATTA+TGG | - | chr8.3:53438781-53438800 | MS.gene59875:intron | 20.0% |
| !! | ATCTAAGAACAATAATCATA+TGG | - | chr8.3:53438916-53438935 | MS.gene59875:intron | 20.0% |
| !! | ATTAATCCAATTAATTGATC+TGG | - | chr8.3:53442944-53442963 | MS.gene59875:intron | 20.0% |
| !! | CAAAATATATCTGTGATATT+TGG | + | chr8.3:53441982-53442001 | None:intergenic | 20.0% |
| !! | CAAGGAAATAAAATAATAAC+AGG | + | chr8.3:53438304-53438323 | None:intergenic | 20.0% |
| !! | CTGAAAAAAAACATAAATTG+TGG | + | chr8.3:53439874-53439893 | None:intergenic | 20.0% |
| !! | GTAAAACAAAATAAAGTCAT+AGG | + | chr8.3:53442299-53442318 | None:intergenic | 20.0% |
| !! | TTATGAAGAACAAGATAATA+AGG | + | chr8.3:53441007-53441026 | None:intergenic | 20.0% |
| !! | TTATTAAATGACACTTTCAT+TGG | + | chr8.3:53437951-53437970 | None:intergenic | 20.0% |
| !!! | TAACTTAATTTCCTTTTATC+AGG | - | chr8.3:53438334-53438353 | MS.gene59875:CDS | 20.0% |
| !!! | TAAGTTCTCATGTTTTTTAA+GGG | - | chr8.3:53438591-53438610 | MS.gene59875:intron | 20.0% |
| !!! | TGTAAATTTTTAAACCACAT+AGG | - | chr8.3:53441696-53441715 | MS.gene59875:intron | 20.0% |
| !!! | TTAAGTTCTCATGTTTTTTA+AGG | - | chr8.3:53438590-53438609 | MS.gene59875:intron | 20.0% |
| !!! | TTTTAGATTATGATTATCTC+TGG | - | chr8.3:53438641-53438660 | MS.gene59875:intron | 20.0% |
| ! | AAAAGATATTCCTGTAACTA+CGG | - | chr8.3:53439758-53439777 | MS.gene59875:intron | 25.0% |
| ! | AAAGAATAGAATTCTGTATC+AGG | - | chr8.3:53440256-53440275 | MS.gene59875:intron | 25.0% |
| ! | AACAAAATAAAGTCATAGGA+TGG | + | chr8.3:53442295-53442314 | None:intergenic | 25.0% |
| ! | AACTGAAACATAACAATGTA+TGG | - | chr8.3:53441776-53441795 | MS.gene59875:intron | 25.0% |
| ! | AATGAGAGAGAAAGAAAATT+TGG | + | chr8.3:53442472-53442491 | None:intergenic | 25.0% |
| ! | ACTATAAATGAAGCAGAATA+GGG | + | chr8.3:53440449-53440468 | None:intergenic | 25.0% |
| ! | ACTTAACAAAAATGTGAACA+TGG | - | chr8.3:53439355-53439374 | MS.gene59875:intron | 25.0% |
| ! | AGTAACTAAAATGATGCTAT+AGG | - | chr8.3:53438953-53438972 | MS.gene59875:intron | 25.0% |
| ! | AGTCAAATTATTTCCTACAA+AGG | - | chr8.3:53441510-53441529 | MS.gene59875:intron | 25.0% |
| ! | ATAGTCTATAGAATGACTAA+TGG | - | chr8.3:53438417-53438436 | MS.gene59875:intron | 25.0% |
| ! | CAAACTACTAATCCAATATT+GGG | - | chr8.3:53439698-53439717 | MS.gene59875:intron | 25.0% |
| ! | CACAATAATTTCATTCATGT+TGG | - | chr8.3:53441034-53441053 | MS.gene59875:intron | 25.0% |
| ! | CATCAGCTAAAATAGTAAAA+TGG | + | chr8.3:53439065-53439084 | None:intergenic | 25.0% |
| ! | GAACAATAATCATATGGTTT+AGG | - | chr8.3:53438922-53438941 | MS.gene59875:intron | 25.0% |
| ! | GATATAACAGGATAGATATT+GGG | - | chr8.3:53442781-53442800 | MS.gene59875:intron | 25.0% |
| ! | GCAAAGGAAATAAACATATT+TGG | + | chr8.3:53441394-53441413 | None:intergenic | 25.0% |
| ! | GTAACTAAAATGATGCTATA+GGG | - | chr8.3:53438954-53438973 | MS.gene59875:intron | 25.0% |
| ! | GTAGTTAATTAAACAAACAG+AGG | + | chr8.3:53442881-53442900 | None:intergenic | 25.0% |
| ! | GTCAAATTATTTCCTACAAA+GGG | - | chr8.3:53441511-53441530 | MS.gene59875:intron | 25.0% |
| ! | TAAAATTTGACCAATCTTAC+TGG | + | chr8.3:53438200-53438219 | None:intergenic | 25.0% |
| ! | TAACTAAAATGATGCTATAG+GGG | - | chr8.3:53438955-53438974 | MS.gene59875:intron | 25.0% |
| ! | TAAGTAATAACAACTAGAGT+AGG | - | chr8.3:53438458-53438477 | MS.gene59875:intron | 25.0% |
| ! | TACTATAAATGAAGCAGAAT+AGG | + | chr8.3:53440450-53440469 | None:intergenic | 25.0% |
| ! | TATACTTGCAAATAGAAATG+AGG | + | chr8.3:53439129-53439148 | None:intergenic | 25.0% |
| ! | TCAAACTACTAATCCAATAT+TGG | - | chr8.3:53439697-53439716 | MS.gene59875:intron | 25.0% |
| ! | TCATTTCTATTTGCAAGTAT+AGG | - | chr8.3:53439128-53439147 | MS.gene59875:intron | 25.0% |
| ! | TGAAATAAAACTAGAATGCT+AGG | - | chr8.3:53438701-53438720 | MS.gene59875:CDS | 25.0% |
| ! | TGAGTTTGAAAAATCAAATC+TGG | + | chr8.3:53442202-53442221 | None:intergenic | 25.0% |
| ! | TGATATAACAGGATAGATAT+TGG | - | chr8.3:53442780-53442799 | MS.gene59875:intron | 25.0% |
| ! | TTAAAATCTGTCCTGATAAA+AGG | + | chr8.3:53438348-53438367 | None:intergenic | 25.0% |
| ! | TTAAGTTACATATCAGTACA+AGG | + | chr8.3:53438322-53438341 | None:intergenic | 25.0% |
| ! | TTTCATAATTTATTTCCCAC+TGG | - | chr8.3:53438221-53438240 | MS.gene59875:intron | 25.0% |
| !! | AACTACATTTTACAACATTG+GGG | - | chr8.3:53442628-53442647 | MS.gene59875:intron | 25.0% |
| !! | AGAGATTTTATTCATAGCAA+AGG | + | chr8.3:53441410-53441429 | None:intergenic | 25.0% |
| !! | ATCAAAACATCTAGAATCAA+TGG | + | chr8.3:53442816-53442835 | None:intergenic | 25.0% |
| !! | ATTGATTTCTTAGTTTCCAT+TGG | - | chr8.3:53440548-53440567 | MS.gene59875:intron | 25.0% |
| !! | ATTGTTCTCCTAGTTTATTT+TGG | - | chr8.3:53441342-53441361 | MS.gene59875:intron | 25.0% |
| !! | CAACTACATTTTACAACATT+GGG | - | chr8.3:53442627-53442646 | MS.gene59875:intron | 25.0% |
| !! | GGAATATTTTCCCATTAATA+TGG | - | chr8.3:53440755-53440774 | MS.gene59875:intron | 25.0% |
| !! | TAACAAAGCATTAAGAATGA+AGG | + | chr8.3:53442709-53442728 | None:intergenic | 25.0% |
| !! | TTCACATTTTTGTTAAGTGT+GGG | + | chr8.3:53439353-53439372 | None:intergenic | 25.0% |
| !! | TTGGTGGTAAAATAGATAAT+TGG | - | chr8.3:53440683-53440702 | MS.gene59875:intron | 25.0% |
| !!! | CTCATAACAGTTTTAACTTT+TGG | - | chr8.3:53439243-53439262 | MS.gene59875:intron | 25.0% |
| !!! | TGTTTTTTGATAGCTTTGTT+GGG | - | chr8.3:53442972-53442991 | MS.gene59875:intron | 25.0% |
| !!! | TTGTTTTTTGATAGCTTTGT+TGG | - | chr8.3:53442971-53442990 | MS.gene59875:intron | 25.0% |
| !!! | TTTTAAAAAAAAGTCTTGGC+TGG | + | chr8.3:53442063-53442082 | None:intergenic | 25.0% |
| AAACATGTAATGAGAGAGAA+AGG | + | chr8.3:53442922-53442941 | None:intergenic | 30.0% | |
| AAAGCTTATACTTCTTAGGT+AGG | - | chr8.3:53439301-53439320 | MS.gene59875:intron | 30.0% | |
| AAATGTTCTTGTGATGATAC+AGG | + | chr8.3:53440578-53440597 | None:intergenic | 30.0% | |
| AACATGTAATGAGAGAGAAA+GGG | + | chr8.3:53442921-53442940 | None:intergenic | 30.0% | |
| AAGAGAGACTAAGAAAAAAC+AGG | - | chr8.3:53437889-53437908 | MS.gene59875:CDS | 30.0% | |
| AAGCTTATACTTCTTAGGTA+GGG | - | chr8.3:53439302-53439321 | MS.gene59875:intron | 30.0% | |
| AATATCAAACTCGAGAGAAA+TGG | + | chr8.3:53441442-53441461 | None:intergenic | 30.0% | |
| AATTAAACAAACAGAGGAAG+TGG | + | chr8.3:53442875-53442894 | None:intergenic | 30.0% | |
| ACAAACAATAGAAAACTGCA+TGG | + | chr8.3:53438058-53438077 | None:intergenic | 30.0% | |
| ACCAAGTTACGATTATATTC+AGG | - | chr8.3:53442589-53442608 | MS.gene59875:intron | 30.0% | |
| AGAATAACAGAATACCTACA+GGG | + | chr8.3:53441927-53441946 | None:intergenic | 30.0% | |
| AGAATTTGAGAATTGGAAAG+AGG | - | chr8.3:53443021-53443040 | MS.gene59875:CDS | 30.0% | |
| AGTCTGTAATCAACAAATCA+TGG | + | chr8.3:53439155-53439174 | None:intergenic | 30.0% | |
| ATAAAACTAGAATGCTAGGA+TGG | - | chr8.3:53438705-53438724 | MS.gene59875:CDS | 30.0% | |
| ATCATCACAAGAACATTTAG+AGG | - | chr8.3:53440580-53440599 | MS.gene59875:intron | 30.0% | |
| ATGACAAAAACTTCGTTATC+TGG | - | chr8.3:53439998-53440017 | MS.gene59875:intron | 30.0% | |
| CAATAATAGAGCTACACTAA+TGG | + | chr8.3:53438372-53438391 | None:intergenic | 30.0% | |
| CATGAAAGCTTATACTTCTT+AGG | - | chr8.3:53439297-53439316 | MS.gene59875:intron | 30.0% | |
| CCAAGTTACGATTATATTCA+GGG | - | chr8.3:53442590-53442609 | MS.gene59875:intron | 30.0% | |
| CCAATGTTGTAAAATGTAGT+TGG | + | chr8.3:53442629-53442648 | None:intergenic | 30.0% | |
| CTATAAATGAAGCAGAATAG+GGG | + | chr8.3:53440448-53440467 | None:intergenic | 30.0% | |
| GACTTGGGGAATATAAAAAA+TGG | - | chr8.3:53440138-53440157 | MS.gene59875:intron | 30.0% | |
| GATAGAAGCCTCATATATAA+GGG | + | chr8.3:53439809-53439828 | None:intergenic | 30.0% | |
| GCTATTTACAGATATTACAG+AGG | + | chr8.3:53440647-53440666 | None:intergenic | 30.0% | |
| GCTGTTAGATAAATATGATG+TGG | + | chr8.3:53441656-53441675 | None:intergenic | 30.0% | |
| TAAACTAACACATTCCTATG+TGG | + | chr8.3:53441713-53441732 | None:intergenic | 30.0% | |
| TAATTTACACACAGAAAGAC+TGG | - | chr8.3:53439094-53439113 | MS.gene59875:intron | 30.0% | |
| TACTGAATCTTAACTTACCA+AGG | + | chr8.3:53440200-53440219 | None:intergenic | 30.0% | |
| TAGAATAACAGAATACCTAC+AGG | + | chr8.3:53441928-53441947 | None:intergenic | 30.0% | |
| TAGAATGTAGAAATGTACAG+TGG | - | chr8.3:53438137-53438156 | MS.gene59875:CDS | 30.0% | |
| TCATTTATAGTAGACCTACA+GGG | - | chr8.3:53440458-53440477 | MS.gene59875:intron | 30.0% | |
| TGACGAATTCAGTGTATTTA+AGG | - | chr8.3:53438538-53438557 | MS.gene59875:CDS | 30.0% | |
| TGGAGGAATTGAAGTTATTA+TGG | - | chr8.3:53438157-53438176 | MS.gene59875:CDS | 30.0% | |
| TTACCAAGGAAAAGATTCTA+AGG | + | chr8.3:53440186-53440205 | None:intergenic | 30.0% | |
| TTCATTTATAGTAGACCTAC+AGG | - | chr8.3:53440457-53440476 | MS.gene59875:intron | 30.0% | |
| TTCTGGATCCAAAATAAACT+AGG | + | chr8.3:53441353-53441372 | None:intergenic | 30.0% | |
| TTGGGGAATATAAAAAATGG+TGG | - | chr8.3:53440141-53440160 | MS.gene59875:intron | 30.0% | |
| ! | AAAAGGAAGTTGATCAGTTA+TGG | + | chr8.3:53440972-53440991 | None:intergenic | 30.0% |
| ! | ATCTATTTTACCACCAATGT+AGG | + | chr8.3:53440680-53440699 | None:intergenic | 30.0% |
| ! | CAGAATTTAGGATAACAAGA+AGG | - | chr8.3:53440722-53440741 | MS.gene59875:intron | 30.0% |
| ! | CATTAGTGTAGCTCTATTAT+TGG | - | chr8.3:53438370-53438389 | MS.gene59875:CDS | 30.0% |
| ! | CCAACTACATTTTACAACAT+TGG | - | chr8.3:53442626-53442645 | MS.gene59875:intron | 30.0% |
| ! | CTAAGAAGTATAAGCTTTCA+TGG | + | chr8.3:53439299-53439318 | None:intergenic | 30.0% |
| ! | CTTCTTGTTATCCTAAATTC+TGG | + | chr8.3:53440724-53440743 | None:intergenic | 30.0% |
| ! | GAAAGAAAATTTGGTTTCCA+TGG | + | chr8.3:53442463-53442482 | None:intergenic | 30.0% |
| ! | GTAGACATTTGTTAGACAAA+AGG | + | chr8.3:53440511-53440530 | None:intergenic | 30.0% |
| ! | GTTCACATTTTTGTTAAGTG+TGG | + | chr8.3:53439354-53439373 | None:intergenic | 30.0% |
| ! | TAAGGCGTATTTGAAGTAAA+AGG | + | chr8.3:53440989-53441008 | None:intergenic | 30.0% |
| ! | TGAATTTTACAATGCTCCAT+TGG | - | chr8.3:53442233-53442252 | MS.gene59875:intron | 30.0% |
| ! | TGCTGTGTGAAGAATTTTTA+AGG | + | chr8.3:53441610-53441629 | None:intergenic | 30.0% |
| ! | TGTATGTTTTCTTAAGCTTC+TGG | - | chr8.3:53440864-53440883 | MS.gene59875:intron | 30.0% |
| ! | TGTTTCTGCACCATATTAAT+GGG | + | chr8.3:53440768-53440787 | None:intergenic | 30.0% |
| ! | TTAGGAAGTTTTGCTGAATT+TGG | - | chr8.3:53442346-53442365 | MS.gene59875:intron | 30.0% |
| ! | TTGTAAAGAGCTTTTCTCTT+GGG | - | chr8.3:53441306-53441325 | MS.gene59875:intron | 30.0% |
| ! | TTTGTAAAGAGCTTTTCTCT+TGG | - | chr8.3:53441305-53441324 | MS.gene59875:intron | 30.0% |
| !! | GATGCAAAAAAAGTGTCATA+AGG | + | chr8.3:53439960-53439979 | None:intergenic | 30.0% |
| !! | TAAGTTGGTTACCATACATT+TGG | - | chr8.3:53440946-53440965 | MS.gene59875:intron | 30.0% |
| !! | TAATATGAGGGTATCATTGT+AGG | - | chr8.3:53441241-53441260 | MS.gene59875:intron | 30.0% |
| !! | TTGTTTCTGCACCATATTAA+TGG | + | chr8.3:53440769-53440788 | None:intergenic | 30.0% |
| !!! | TGAAGTTGTTGACTTAGTTT+TGG | + | chr8.3:53440793-53440812 | None:intergenic | 30.0% |
| !!! | TTTTAACTTTTGGCCTATTC+TGG | - | chr8.3:53439253-53439272 | MS.gene59875:intron | 30.0% |
| !!! | TTTTTTATATTCCCCAAGTC+AGG | + | chr8.3:53440138-53440157 | None:intergenic | 30.0% |
| AAAATACTCCACACAAAGAC+TGG | - | chr8.3:53437915-53437934 | MS.gene59875:CDS | 35.0% | |
| AAGTTCAGAAGAGTAACCAA+TGG | - | chr8.3:53440296-53440315 | MS.gene59875:intron | 35.0% | |
| AATAACAACTAGAGTAGGAG+AGG | - | chr8.3:53438463-53438482 | MS.gene59875:intron | 35.0% | |
| AATGTAGAAATGTACAGTGG+AGG | - | chr8.3:53438140-53438159 | MS.gene59875:CDS | 35.0% | |
| ACAACTTACTTGCATGTTCA+TGG | + | chr8.3:53442428-53442447 | None:intergenic | 35.0% | |
| ACAGTGGTTATGAACCATTA+TGG | - | chr8.3:53441270-53441289 | MS.gene59875:intron | 35.0% | |
| ACTACTAATCCAATATTGGG+AGG | - | chr8.3:53439701-53439720 | MS.gene59875:intron | 35.0% | |
| ATATTCCTGTAACTACGGTT+GGG | - | chr8.3:53439763-53439782 | MS.gene59875:intron | 35.0% | |
| ATCAGTTATGGCCAAATGTA+TGG | + | chr8.3:53440960-53440979 | None:intergenic | 35.0% | |
| ATGCAGTGTAGGTCAAATAT+CGG | + | chr8.3:53439509-53439528 | None:intergenic | 35.0% | |
| ATTCACATAGCCAGTAAGAT+TGG | - | chr8.3:53438187-53438206 | MS.gene59875:intron | 35.0% | |
| ATTTGTGAAGATTGGCAGTA+CGG | + | chr8.3:53439439-53439458 | None:intergenic | 35.0% | |
| CACCAATGTAGGAATCAAAA+CGG | + | chr8.3:53440669-53440688 | None:intergenic | 35.0% | |
| CCCTGAATATAATCGTAACT+TGG | + | chr8.3:53442593-53442612 | None:intergenic | 35.0% | |
| CTACTAATCCAATATTGGGA+GGG | - | chr8.3:53439702-53439721 | MS.gene59875:intron | 35.0% | |
| CTCATTGACCAACTTTCATA+CGG | - | chr8.3:53441092-53441111 | MS.gene59875:intron | 35.0% | |
| CTCTTCGTTTAGACTTTAGA+GGG | - | chr8.3:53440378-53440397 | MS.gene59875:intron | 35.0% | |
| CTCTTGCATCATATCTTGTT+AGG | + | chr8.3:53441744-53441763 | None:intergenic | 35.0% | |
| GAAAGAGGATTTAACATCAG+AGG | - | chr8.3:53443036-53443055 | MS.gene59875:CDS | 35.0% | |
| GATTTAACATCAGAGGATTC+AGG | - | chr8.3:53443043-53443062 | MS.gene59875:CDS | 35.0% | |
| GGATAGAAGCCTCATATATA+AGG | + | chr8.3:53439810-53439829 | None:intergenic | 35.0% | |
| GGGAAAATATTCCATAGTTG+AGG | + | chr8.3:53440748-53440767 | None:intergenic | 35.0% | |
| GTAGGACATAAATACAACGT+TGG | - | chr8.3:53438258-53438277 | MS.gene59875:intron | 35.0% | |
| GTGGAGAAGAATTTGAGAAT+TGG | - | chr8.3:53443014-53443033 | MS.gene59875:CDS | 35.0% | |
| GTTATGAGCTACAAAATCAG+TGG | + | chr8.3:53439231-53439250 | None:intergenic | 35.0% | |
| TACTGCCAATCTTCACAAAT+TGG | - | chr8.3:53439439-53439458 | MS.gene59875:intron | 35.0% | |
| TATCTCTGGTATAACTTCTC+TGG | - | chr8.3:53438655-53438674 | MS.gene59875:intron | 35.0% | |
| TATGTAATAATTGCCGCATG+CGG | + | chr8.3:53442120-53442139 | None:intergenic | 35.0% | |
| TCAATCAAAGCTTTCACTCT+CGG | + | chr8.3:53440533-53440552 | None:intergenic | 35.0% | |
| TCAGATCGAAATCGTAATTG+AGG | + | chr8.3:53439644-53439663 | None:intergenic | 35.0% | |
| TCATTGACCAACTTTCATAC+GGG | - | chr8.3:53441093-53441112 | MS.gene59875:intron | 35.0% | |
| TCATTGTAGGTGTTAAACAG+TGG | - | chr8.3:53441254-53441273 | MS.gene59875:intron | 35.0% | |
| TCGTCTATTGCACTTATTTG+TGG | - | chr8.3:53440053-53440072 | MS.gene59875:intron | 35.0% | |
| TGATGATACAGGAAATCCAA+TGG | + | chr8.3:53440567-53440586 | None:intergenic | 35.0% | |
| TGCAATTATCATGTCTGCAA+GGG | + | chr8.3:53441808-53441827 | None:intergenic | 35.0% | |
| TGGTTATGAACCATTATGGA+GGG | - | chr8.3:53441274-53441293 | MS.gene59875:intron | 35.0% | |
| TTAACTAGACAGTTAGGAGT+CGG | + | chr8.3:53440425-53440444 | None:intergenic | 35.0% | |
| ! | CATCCTTAGAATCTTTTCCT+TGG | - | chr8.3:53440180-53440199 | MS.gene59875:intron | 35.0% |
| ! | GTGAATGATTGAGTTGTAAC+CGG | + | chr8.3:53440348-53440367 | None:intergenic | 35.0% |
| ! | GTGGGGTACTAATAATATGA+GGG | - | chr8.3:53441229-53441248 | MS.gene59875:intron | 35.0% |
| ! | TAGAAAACACGTCTAGAACT+AGG | + | chr8.3:53439831-53439850 | None:intergenic | 35.0% |
| ! | TGTAGAGATGAGGTATTTAG+AGG | + | chr8.3:53441871-53441890 | None:intergenic | 35.0% |
| ! | TGTGGGGTACTAATAATATG+AGG | - | chr8.3:53441228-53441247 | MS.gene59875:intron | 35.0% |
| ! | TTCAATTGAAACTAGTCTCG+TGG | + | chr8.3:53439030-53439049 | None:intergenic | 35.0% |
| !!! | AAGTTGATGTCTTTTGCCAA+TGG | + | chr8.3:53442252-53442271 | None:intergenic | 35.0% |
| !!! | GTGATGGATTTTTTGACAAC+TGG | + | chr8.3:53439471-53439490 | None:intergenic | 35.0% |
| AAAGAACTCTCCCTCCATAA+TGG | + | chr8.3:53441287-53441306 | None:intergenic | 40.0% | |
| AACAGATTGGGACCGTTATT+AGG | - | chr8.3:53440028-53440047 | MS.gene59875:intron | 40.0% | |
| AAGTAAGTGGGTAAGGGATA+CGG | + | chr8.3:53441900-53441919 | None:intergenic | 40.0% | |
| AAGTACCCATAGAGATGTAG+TGG | - | chr8.3:53438849-53438868 | MS.gene59875:intron | 40.0% | |
| ACACTCAGCAAAAATAGAGC+AGG | - | chr8.3:53440222-53440241 | MS.gene59875:intron | 40.0% | |
| ACAGATTGGGACCGTTATTA+GGG | - | chr8.3:53440029-53440048 | MS.gene59875:intron | 40.0% | |
| ACCAACTTAAGCATCATGAC+TGG | + | chr8.3:53440935-53440954 | None:intergenic | 40.0% | |
| ACCAGTCATGATGCTTAAGT+TGG | - | chr8.3:53440931-53440950 | MS.gene59875:intron | 40.0% | |
| ACCATGTGTTCTCACACAAA+TGG | + | chr8.3:53439730-53439749 | None:intergenic | 40.0% | |
| AGAAACTAAGAGAACCCTGT+AGG | + | chr8.3:53440475-53440494 | None:intergenic | 40.0% | |
| AGAACATTTAGAGGCAGTTC+TGG | - | chr8.3:53440589-53440608 | MS.gene59875:intron | 40.0% | |
| AGGACTCACATTTCCAGATT+GGG | + | chr8.3:53441119-53441138 | None:intergenic | 40.0% | |
| AGGGTTCTCTTAGTTTCTGT+AGG | - | chr8.3:53440477-53440496 | MS.gene59875:intron | 40.0% | |
| AGTACCCATAGAGATGTAGT+GGG | - | chr8.3:53438850-53438869 | MS.gene59875:intron | 40.0% | |
| ATATCGGCCATGGAAGATTT+CGG | + | chr8.3:53439493-53439512 | None:intergenic | 40.0% | |
| ATCAAGCAAGTAGTGTTTGG+TGG | - | chr8.3:53442995-53443014 | MS.gene59875:intron | 40.0% | |
| ATCCAGAATTCCTGCATAAG+GGG | - | chr8.3:53441365-53441384 | MS.gene59875:intron | 40.0% | |
| ATCTGGTAGTAGCAACAGAT+TGG | - | chr8.3:53440015-53440034 | MS.gene59875:intron | 40.0% | |
| ATGCGATATATTGAGTGCTC+AGG | - | chr8.3:53438566-53438585 | MS.gene59875:CDS | 40.0% | |
| ATTCTGTATCAGGCAAGAAC+AGG | - | chr8.3:53440266-53440285 | MS.gene59875:intron | 40.0% | |
| CAATAGACGACCCCTAATAA+CGG | + | chr8.3:53440043-53440062 | None:intergenic | 40.0% | |
| CACAGCCAATTTGTGAAGAT+TGG | + | chr8.3:53439447-53439466 | None:intergenic | 40.0% | |
| CCTCTTCGTTTAGACTTTAG+AGG | - | chr8.3:53440377-53440396 | MS.gene59875:intron | 40.0% | |
| GAGATCTTTCTGTAGACATG+TGG | - | chr8.3:53439558-53439577 | MS.gene59875:intron | 40.0% | |
| GATATTCCTGTAACTACGGT+TGG | - | chr8.3:53439762-53439781 | MS.gene59875:intron | 40.0% | |
| GATCCAGAATTCCTGCATAA+GGG | - | chr8.3:53441364-53441383 | MS.gene59875:intron | 40.0% | |
| GATGCACACATGCTTCAATT+AGG | - | chr8.3:53442328-53442347 | MS.gene59875:intron | 40.0% | |
| GCATAGTCACTATCCACAAT+CGG | + | chr8.3:53439398-53439417 | None:intergenic | 40.0% | |
| GGAACTAGCAAATGTGAAAC+TGG | + | chr8.3:53441553-53441572 | None:intergenic | 40.0% | |
| GGACATAAATACAACGTTGG+TGG | - | chr8.3:53438261-53438280 | MS.gene59875:intron | 40.0% | |
| GGGTTCTCTTAGTTTCTGTA+GGG | - | chr8.3:53440478-53440497 | MS.gene59875:intron | 40.0% | |
| GGTCAATGAGTTCAAGACTT+CGG | + | chr8.3:53441082-53441101 | None:intergenic | 40.0% | |
| GGTTCTCTTAGTTTCTGTAG+GGG | - | chr8.3:53440479-53440498 | MS.gene59875:intron | 40.0% | |
| GTGCAATTATCATGTCTGCA+AGG | + | chr8.3:53441809-53441828 | None:intergenic | 40.0% | |
| GTGGTTATGAACCATTATGG+AGG | - | chr8.3:53441273-53441292 | MS.gene59875:intron | 40.0% | |
| GTTCTCTTAGTTTCTGTAGG+GGG | - | chr8.3:53440480-53440499 | MS.gene59875:intron | 40.0% | |
| TAACAAGAAGGCCTCAACTA+TGG | - | chr8.3:53440734-53440753 | MS.gene59875:intron | 40.0% | |
| TAGGACTCACATTTCCAGAT+TGG | + | chr8.3:53441120-53441139 | None:intergenic | 40.0% | |
| TAGGGGTTAACTAGACAGTT+AGG | + | chr8.3:53440431-53440450 | None:intergenic | 40.0% | |
| TATTTGGATTCCCCTTATGC+AGG | + | chr8.3:53441378-53441397 | None:intergenic | 40.0% | |
| TCCTTTCACACTGGATTAAC+CGG | - | chr8.3:53440326-53440345 | MS.gene59875:intron | 40.0% | |
| TCTCTGGCATAACTTCTTCA+GGG | - | chr8.3:53438671-53438690 | MS.gene59875:intron | 40.0% | |
| TCTGGTAGTAGCAACAGATT+GGG | - | chr8.3:53440016-53440035 | MS.gene59875:intron | 40.0% | |
| TCTTGAGGTTCAAGACAACT+TGG | - | chr8.3:53442652-53442671 | MS.gene59875:intron | 40.0% | |
| TGCTCATGAAGCCAGAATTT+AGG | - | chr8.3:53440710-53440729 | MS.gene59875:intron | 40.0% | |
| TGCTGAATTTGGATCTTTGC+AGG | - | chr8.3:53442357-53442376 | MS.gene59875:intron | 40.0% | |
| TTACAACATTGGGGATCTTG+AGG | - | chr8.3:53442637-53442656 | MS.gene59875:intron | 40.0% | |
| TTCAAGTCACTTGTTCTGTC+AGG | + | chr8.3:53438489-53438508 | None:intergenic | 40.0% | |
| TTCTCTGGCATAACTTCTTC+AGG | - | chr8.3:53438670-53438689 | MS.gene59875:intron | 40.0% | |
| TTCTGTATCAGGCAAGAACA+GGG | - | chr8.3:53440267-53440286 | MS.gene59875:intron | 40.0% | |
| TTGGGCACTAGAATAAAACC+TGG | - | chr8.3:53439781-53439800 | MS.gene59875:intron | 40.0% | |
| ! | AAGACAACTTGGCTCGAATA+TGG | - | chr8.3:53442663-53442682 | MS.gene59875:intron | 40.0% |
| ! | ACATCAGAGGATTCAGGTTA+TGG | - | chr8.3:53443049-53443068 | MS.gene59875:CDS | 40.0% |
| ! | AGAGATGAGGTATTTAGAGG+AGG | + | chr8.3:53441868-53441887 | None:intergenic | 40.0% |
| ! | ATGGTTCAGTTTGAAGCTGT+AGG | - | chr8.3:53438724-53438743 | MS.gene59875:CDS | 40.0% |
| ! | ATTTATTTCCCACTGGCTAG+TGG | - | chr8.3:53438228-53438247 | MS.gene59875:intron | 40.0% |
| ! | GATTTGGTAACACCAGCAAT+CGG | + | chr8.3:53438996-53439015 | None:intergenic | 40.0% |
| ! | TGGTTCAGTTTGAAGCTGTA+GGG | - | chr8.3:53438725-53438744 | MS.gene59875:CDS | 40.0% |
| ! | TTTTGTTCTGCTCCTGACTT+GGG | - | chr8.3:53440123-53440142 | MS.gene59875:intron | 40.0% |
| !! | ACGAGATTAGTCTCAAGTCA+TGG | - | chr8.3:53440890-53440909 | MS.gene59875:intron | 40.0% |
| !! | AGGGCTTTAGATTAGAACAG+AGG | - | chr8.3:53438744-53438763 | MS.gene59875:CDS | 40.0% |
| !! | CCTCTAAAGTCTAAACGAAG+AGG | + | chr8.3:53440380-53440399 | None:intergenic | 40.0% |
| !!! | AGCCGTTTTGATTCCTACAT+TGG | - | chr8.3:53440664-53440683 | MS.gene59875:intron | 40.0% |
| !!! | CGTTTTGATTCCTACATTGG+TGG | - | chr8.3:53440667-53440686 | MS.gene59875:intron | 40.0% |
| !!! | GTTGTTTTTCTCTTCTGCCA+TGG | - | chr8.3:53442443-53442462 | MS.gene59875:intron | 40.0% |
| AAATGGCACCCTCCCAATAT+TGG | + | chr8.3:53439713-53439732 | None:intergenic | 45.0% | |
| AACATACCTGAGGGAGAAGT+GGG | + | chr8.3:53439615-53439634 | None:intergenic | 45.0% | |
| ACCGGTTAATCCAGTGTGAA+AGG | + | chr8.3:53440330-53440349 | None:intergenic | 45.0% | |
| ACCTGGAGCCCTTATATATG+AGG | - | chr8.3:53439798-53439817 | MS.gene59875:intron | 45.0% | |
| ACGGGAATCATGTAGAGATG+AGG | + | chr8.3:53441881-53441900 | None:intergenic | 45.0% | |
| AGGAGGTTCCTATCTCAGTA+AGG | + | chr8.3:53441851-53441870 | None:intergenic | 45.0% | |
| AGGTTCCTATCTCAGTAAGG+AGG | + | chr8.3:53441848-53441867 | None:intergenic | 45.0% | |
| AGTAAGTGGGTAAGGGATAC+GGG | + | chr8.3:53441899-53441918 | None:intergenic | 45.0% | |
| AGTCTCCCACTACATCTCTA+TGG | + | chr8.3:53438858-53438877 | None:intergenic | 45.0% | |
| ATTCGAGCATGGCACATTGT+AGG | - | chr8.3:53442382-53442401 | MS.gene59875:intron | 45.0% | |
| ATTGAAGCATGTGTGCATCG+TGG | + | chr8.3:53442327-53442346 | None:intergenic | 45.0% | |
| CAGATTGGGACCGTTATTAG+GGG | - | chr8.3:53440030-53440049 | MS.gene59875:intron | 45.0% | |
| CAGCAAGACTAATGCAGTGT+AGG | + | chr8.3:53439520-53439539 | None:intergenic | 45.0% | |
| CGAAATCGTAATTGAGGACC+TGG | + | chr8.3:53439638-53439657 | None:intergenic | 45.0% | |
| CTGTTGACAGAGACCAGAAT+AGG | + | chr8.3:53439269-53439288 | None:intergenic | 45.0% | |
| GACTCAGCATGTGAGACTAT+AGG | + | chr8.3:53441139-53441158 | None:intergenic | 45.0% | |
| GCATCTGTGTAGTTCAAGTC+AGG | - | chr8.3:53440818-53440837 | MS.gene59875:intron | 45.0% | |
| GCCATTTGTGTGAGAACACA+TGG | - | chr8.3:53439726-53439745 | MS.gene59875:intron | 45.0% | |
| GGATCCAGAATTCCTGCATA+AGG | - | chr8.3:53441363-53441382 | MS.gene59875:intron | 45.0% | |
| GGGATCAAGCAAGTAGTGTT+TGG | - | chr8.3:53442992-53443011 | MS.gene59875:intron | 45.0% | |
| GTCTCCCACTACATCTCTAT+GGG | + | chr8.3:53438857-53438876 | None:intergenic | 45.0% | |
| GTGAAAGGAGAGTGATCCAT+TGG | + | chr8.3:53440315-53440334 | None:intergenic | 45.0% | |
| TAGAGCCTCCTTACTGAGAT+AGG | - | chr8.3:53441840-53441859 | MS.gene59875:intron | 45.0% | |
| TATCAGGCAAGAACAGGGAA+AGG | - | chr8.3:53440272-53440291 | MS.gene59875:intron | 45.0% | |
| TCCATCACCGAAATCTTCCA+TGG | - | chr8.3:53439483-53439502 | MS.gene59875:intron | 45.0% | |
| TGTAGGTCAAATATCGGCCA+TGG | + | chr8.3:53439503-53439522 | None:intergenic | 45.0% | |
| TGTGAACATGGACATCAGTC+CGG | - | chr8.3:53439367-53439386 | MS.gene59875:intron | 45.0% | |
| TTCCCCTTATGCAGGAATTC+TGG | + | chr8.3:53441370-53441389 | None:intergenic | 45.0% | |
| ! | AGGAATTTTCTGTAGGGAGC+TGG | - | chr8.3:53441179-53441198 | MS.gene59875:intron | 45.0% |
| ! | CAGGCGAGGAATTTTCTGTA+GGG | - | chr8.3:53441173-53441192 | MS.gene59875:intron | 45.0% |
| ! | TTTGTTCTGCTCCTGACTTG+GGG | - | chr8.3:53440124-53440143 | MS.gene59875:intron | 45.0% |
| !! | AAAGAGTACCTTCCGATTGC+TGG | - | chr8.3:53438981-53439000 | MS.gene59875:intron | 45.0% |
| !! | CATTTAGAGGCAGTTCTGGA+TGG | - | chr8.3:53440593-53440612 | MS.gene59875:intron | 45.0% |
| !! | GTTTTGTTCTGCTCCTGACT+TGG | - | chr8.3:53440122-53440141 | MS.gene59875:intron | 45.0% |
| ACTTTCATACGGGCCCAATC+TGG | - | chr8.3:53441103-53441122 | MS.gene59875:intron | 50.0% | |
| AGGACCTGGAACATACCTGA+GGG | + | chr8.3:53439624-53439643 | None:intergenic | 50.0% | |
| CTACAGGGCGACAAGTAAGT+GGG | + | chr8.3:53441912-53441931 | None:intergenic | 50.0% | |
| CTATCCACAATCGGTGACAC+CGG | + | chr8.3:53439389-53439408 | None:intergenic | 50.0% | |
| CTCCACACAAAGACTGGATC+AGG | - | chr8.3:53437921-53437940 | MS.gene59875:CDS | 50.0% | |
| CTCCTGATCCAGTCTTTGTG+TGG | + | chr8.3:53437926-53437945 | None:intergenic | 50.0% | |
| CTTTGCAGGCTATTCGAGCA+TGG | - | chr8.3:53442371-53442390 | MS.gene59875:intron | 50.0% | |
| GAACATACCTGAGGGAGAAG+TGG | + | chr8.3:53439616-53439635 | None:intergenic | 50.0% | |
| GAGGAAGTGGAGATCGTACT+CGG | + | chr8.3:53442862-53442881 | None:intergenic | 50.0% | |
| GAGTCTGAAGAATGACGAGC+AGG | - | chr8.3:53441154-53441173 | MS.gene59875:intron | 50.0% | |
| GATTGGGCCCGTATGAAAGT+TGG | + | chr8.3:53441103-53441122 | None:intergenic | 50.0% | |
| GCCATGGAAGATTTCGGTGA+TGG | + | chr8.3:53439487-53439506 | None:intergenic | 50.0% | |
| GCCTCATATATAAGGGCTCC+AGG | + | chr8.3:53439802-53439821 | None:intergenic | 50.0% | |
| GGATCACTCTCCTTTCACAC+TGG | - | chr8.3:53440317-53440336 | MS.gene59875:intron | 50.0% | |
| GGCGACAAGTAAGTGGGTAA+GGG | + | chr8.3:53441906-53441925 | None:intergenic | 50.0% | |
| TAGTCTCGTGGCAAAAGCTG+CGG | + | chr8.3:53439018-53439037 | None:intergenic | 50.0% | |
| TAGTGCCCAACCGTAGTTAC+AGG | + | chr8.3:53439771-53439790 | None:intergenic | 50.0% | |
| TCAACAGCCATCCTGAATGG+CGG | - | chr8.3:53441573-53441592 | MS.gene59875:intron | 50.0% | |
| TCCAAGGAATGTGAGAGGTG+TGG | - | chr8.3:53441210-53441229 | MS.gene59875:intron | 50.0% | |
| TCCTCAACAGCCATCCTGAA+TGG | - | chr8.3:53441570-53441589 | MS.gene59875:intron | 50.0% | |
| TGAAACTGGAGCTGCAGTGA+AGG | + | chr8.3:53441539-53441558 | None:intergenic | 50.0% | |
| TGGCACATTGTAGGACGACT+TGG | - | chr8.3:53442391-53442410 | MS.gene59875:intron | 50.0% | |
| TGGGTTCCAAGGAATGTGAG+AGG | - | chr8.3:53441205-53441224 | MS.gene59875:intron | 50.0% | |
| TGGTAACACCAGCAATCGGA+AGG | + | chr8.3:53438992-53439011 | None:intergenic | 50.0% | |
| TGTGAAGATTGGCAGTACGG+CGG | + | chr8.3:53439436-53439455 | None:intergenic | 50.0% | |
| TTCTCCCTCAGGTATGTTCC+AGG | - | chr8.3:53439617-53439636 | MS.gene59875:intron | 50.0% | |
| TTCTGTAGGGAGCTGGTTGT+GGG | - | chr8.3:53441186-53441205 | MS.gene59875:intron | 50.0% | |
| TTTCTGTAGGGAGCTGGTTG+TGG | - | chr8.3:53441185-53441204 | MS.gene59875:intron | 50.0% | |
| ! | CAAGGAATGTGAGAGGTGTG+GGG | - | chr8.3:53441212-53441231 | MS.gene59875:intron | 50.0% |
| ! | CACATTGTAGGACGACTTGG+AGG | - | chr8.3:53442394-53442413 | MS.gene59875:intron | 50.0% |
| ! | CCAAGGAATGTGAGAGGTGT+GGG | - | chr8.3:53441211-53441230 | MS.gene59875:intron | 50.0% |
| ! | GCAGGCGAGGAATTTTCTGT+AGG | - | chr8.3:53441172-53441191 | MS.gene59875:intron | 50.0% |
| !! | ACGGCGGATTTTCGGTTTTC+TGG | + | chr8.3:53439420-53439439 | None:intergenic | 50.0% |
| !! | TTGGCAGTACGGCGGATTTT+CGG | + | chr8.3:53439428-53439447 | None:intergenic | 50.0% |
| CATTTGCCCACTTCTCCCTC+AGG | - | chr8.3:53439606-53439625 | MS.gene59875:intron | 55.0% | |
| CCACTTACTTGTCGCCCTGT+AGG | - | chr8.3:53441910-53441929 | MS.gene59875:intron | 55.0% | |
| CCCACACCTCTCACATTCCT+TGG | + | chr8.3:53441214-53441233 | None:intergenic | 55.0% | |
| CCTACAGGGCGACAAGTAAG+TGG | + | chr8.3:53441913-53441932 | None:intergenic | 55.0% | |
| CGGAGCATGTCAGGCACTTT+GGG | + | chr8.3:53442100-53442119 | None:intergenic | 55.0% | |
| CGTGGCAAAAGCTGCGGATT+TGG | + | chr8.3:53439012-53439031 | None:intergenic | 55.0% | |
| CTGGCTAGTGGCTAGCAAGT+AGG | - | chr8.3:53438240-53438259 | MS.gene59875:intron | 55.0% | |
| CTTGCTAGCCACTAGCCAGT+GGG | + | chr8.3:53438239-53438258 | None:intergenic | 55.0% | |
| GAGGACCTGGAACATACCTG+AGG | + | chr8.3:53439625-53439644 | None:intergenic | 55.0% | |
| GCAGTGAAGGAGCCCTTTGT+AGG | + | chr8.3:53441526-53441545 | None:intergenic | 55.0% | |
| GCCATTCAGGATGGCTGTTG+AGG | + | chr8.3:53441574-53441593 | None:intergenic | 55.0% | |
| GGGCGACAAGTAAGTGGGTA+AGG | + | chr8.3:53441907-53441926 | None:intergenic | 55.0% | |
| TGAAGAATGACGAGCAGGCG+AGG | - | chr8.3:53441159-53441178 | MS.gene59875:intron | 55.0% | |
| ! | ACTTGCTAGCCACTAGCCAG+TGG | + | chr8.3:53438240-53438259 | None:intergenic | 55.0% |
| CACAGCAAGAGCCGCCATTC+AGG | + | chr8.3:53441587-53441606 | None:intergenic | 60.0% | |
| GCAAGAGCCGCCATTCAGGA+TGG | + | chr8.3:53441583-53441602 | None:intergenic | 60.0% | |
| GCGGAGCATGTCAGGCACTT+TGG | + | chr8.3:53442101-53442120 | None:intergenic | 60.0% | |
| GGAGCTGGTTGTGGGTTCCA+AGG | - | chr8.3:53441194-53441213 | MS.gene59875:intron | 60.0% | |
| TGCCTGACATGCTCCGCATG+CGG | - | chr8.3:53442104-53442123 | MS.gene59875:intron | 60.0% | |
| !! | CAGTCCGGTGTCACCGATTG+TGG | - | chr8.3:53439382-53439401 | MS.gene59875:intron | 60.0% |
| TGCCGCATGCGGAGCATGTC+AGG | + | chr8.3:53442109-53442128 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 53437885 | 53443087 | 53437885 | ID=MS.gene59875 |
| chr8.3 | mRNA | 53437885 | 53443087 | 53437885 | ID=MS.gene59875.t1;Parent=MS.gene59875 |
| chr8.3 | exon | 53443002 | 53443087 | 53443002 | ID=MS.gene59875.t1.exon1;Parent=MS.gene59875.t1 |
| chr8.3 | CDS | 53443002 | 53443087 | 53443002 | ID=cds.MS.gene59875.t1;Parent=MS.gene59875.t1 |
| chr8.3 | exon | 53438691 | 53438769 | 53438691 | ID=MS.gene59875.t1.exon2;Parent=MS.gene59875.t1 |
| chr8.3 | CDS | 53438691 | 53438769 | 53438691 | ID=cds.MS.gene59875.t1;Parent=MS.gene59875.t1 |
| chr8.3 | exon | 53438534 | 53438593 | 53438534 | ID=MS.gene59875.t1.exon3;Parent=MS.gene59875.t1 |
| chr8.3 | CDS | 53438534 | 53438593 | 53438534 | ID=cds.MS.gene59875.t1;Parent=MS.gene59875.t1 |
| chr8.3 | exon | 53438288 | 53438409 | 53438288 | ID=MS.gene59875.t1.exon4;Parent=MS.gene59875.t1 |
| chr8.3 | CDS | 53438288 | 53438409 | 53438288 | ID=cds.MS.gene59875.t1;Parent=MS.gene59875.t1 |
| chr8.3 | exon | 53438110 | 53438181 | 53438110 | ID=MS.gene59875.t1.exon5;Parent=MS.gene59875.t1 |
| chr8.3 | CDS | 53438110 | 53438181 | 53438110 | ID=cds.MS.gene59875.t1;Parent=MS.gene59875.t1 |
| chr8.3 | exon | 53437885 | 53437987 | 53437885 | ID=MS.gene59875.t1.exon6;Parent=MS.gene59875.t1 |
| chr8.3 | CDS | 53437885 | 53437987 | 53437885 | ID=cds.MS.gene59875.t1;Parent=MS.gene59875.t1 |
| Gene Sequence |
| Protein sequence |
