AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60548

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60548.t1 MTR_1g492640 98.272 463 8 0 1 463 19 481 0.0 923
MS.gene60548.t1 MTR_1g492640 97.994 349 7 0 115 463 1 349 0.0 690
MS.gene60548.t1 MTR_1g492640 97.633 338 8 0 1 338 19 356 0.0 674
MS.gene60548.t1 MTR_1g492640 97.633 338 8 0 1 338 1 338 0.0 673
MS.gene60548.t1 MTR_4g055610 58.225 462 192 1 1 462 1 461 0.0 575
MS.gene60548.t1 MTR_1g492640 95.023 221 11 0 1 221 19 239 8.31e-153 435
MS.gene60548.t1 MTR_1g492640 95.023 221 11 0 1 221 1 221 2.14e-152 434
MS.gene60548.t1 MTR_8g099320 47.404 443 229 4 23 463 10 450 3.50e-139 407
MS.gene60548.t1 MTR_1g070470 35.280 428 257 10 43 462 24 439 1.27e-75 244
MS.gene60548.t1 MTR_4g055637 57.635 203 79 1 260 462 182 377 4.71e-73 235
MS.gene60548.t1 MTR_6g022790 29.754 447 293 9 22 461 23 455 5.45e-58 198
MS.gene60548.t1 MTR_2g101920 28.842 475 310 12 1 461 1 461 9.52e-55 189
MS.gene60548.t1 MTR_8g080120 30.536 429 271 11 43 461 25 436 1.13e-52 183
MS.gene60548.t1 MTR_5g081630 32.152 395 248 8 72 462 4 382 3.89e-49 172
MS.gene60548.t1 MTR_4g103890 28.708 418 277 9 48 458 17 420 1.24e-48 172
MS.gene60548.t1 MTR_4g104510 29.362 470 298 13 2 462 5 449 1.65e-46 167
MS.gene60548.t1 MTR_4g104510 29.060 468 300 12 2 462 5 447 3.01e-46 166
MS.gene60548.t1 MTR_6g023065 29.011 455 298 10 14 461 27 463 2.78e-45 164
MS.gene60548.t1 MTR_7g038910 29.274 468 299 11 1 461 1 443 3.02e-44 161
MS.gene60548.t1 MTR_6g022780 29.577 426 280 8 43 461 16 428 1.33e-43 159
MS.gene60548.t1 MTR_6g023075 30.282 426 277 8 43 461 16 428 1.39e-43 159
MS.gene60548.t1 MTR_1g093030 29.837 429 274 11 43 461 26 437 1.73e-42 156
MS.gene60548.t1 MTR_1g093020 28.731 449 289 12 23 461 10 437 2.39e-42 155
MS.gene60548.t1 MTR_3g005740 29.221 462 294 15 15 461 26 469 1.23e-40 151
MS.gene60548.t1 MTR_5g054730 28.904 429 278 11 43 461 28 439 1.43e-40 150
MS.gene60548.t1 MTR_1g093020 28.297 417 274 10 23 432 10 408 6.39e-39 145
MS.gene60548.t1 MTR_7g038910 29.504 383 238 11 1 376 1 358 1.55e-38 144
MS.gene60548.t1 MTR_3g085820 28.409 352 230 8 7 351 3 339 2.20e-38 144
MS.gene60548.t1 MTR_7g038910 29.443 377 231 10 1 364 1 355 2.43e-38 143
MS.gene60548.t1 MTR_1g106000 27.706 462 285 12 44 463 18 472 2.12e-37 142
MS.gene60548.t1 MTR_3g115090 28.302 424 274 13 43 447 86 498 1.14e-36 141
MS.gene60548.t1 MTR_1g105980 27.655 452 289 12 44 463 25 470 1.19e-36 140
MS.gene60548.t1 MTR_3g069960 29.921 381 245 9 87 462 19 382 1.48e-36 139
MS.gene60548.t1 MTR_3g069960 29.921 381 245 9 87 462 72 435 1.93e-36 139
MS.gene60548.t1 MTR_2g096830 27.230 426 290 8 43 461 16 428 3.00e-36 139
MS.gene60548.t1 MTR_1g105995 28.821 458 272 13 44 461 24 467 1.06e-34 135
MS.gene60548.t1 MTR_3g096840 26.283 487 307 19 13 461 8 480 1.61e-32 129
MS.gene60548.t1 MTR_0531s0020 29.766 299 192 7 43 334 51 338 4.07e-32 126
MS.gene60548.t1 MTR_1g105990 27.594 453 283 16 44 459 24 468 2.91e-31 125
MS.gene60548.t1 MTR_2g096830 27.679 336 218 8 43 364 16 340 3.73e-31 123
MS.gene60548.t1 MTR_3g088455 26.250 480 313 15 17 461 3 476 1.90e-30 123
MS.gene60548.t1 MTR_1g029750 28.506 435 265 17 17 412 4 431 5.26e-30 122
MS.gene60548.t1 MTR_3g088475 26.424 439 288 11 52 461 45 477 7.72e-30 121
MS.gene60548.t1 MTR_4g073520 25.309 486 305 17 21 463 41 511 2.20e-29 120
MS.gene60548.t1 MTR_4g073520 25.309 486 305 17 21 463 41 511 2.74e-29 120
MS.gene60548.t1 MTR_1g007270 26.250 400 263 12 52 427 44 435 3.88e-29 119
MS.gene60548.t1 MTR_3g110660 24.524 473 305 14 25 460 21 478 5.45e-29 119
MS.gene60548.t1 MTR_3g461440 26.650 394 255 12 52 417 34 421 5.55e-29 119
MS.gene60548.t1 MTR_3g096800 26.116 448 280 17 52 463 44 476 1.56e-28 117
MS.gene60548.t1 MTR_3g461470 25.888 394 258 11 52 417 34 421 2.93e-28 117
MS.gene60548.t1 MTR_3g461430 25.570 395 258 13 52 417 41 428 4.55e-27 114
MS.gene60548.t1 MTR_5g023240 27.646 463 271 18 33 461 78 510 3.21e-26 111
MS.gene60548.t1 MTR_1g007380 24.615 455 293 17 44 460 26 468 5.66e-26 110
MS.gene60548.t1 MTR_3g096830 26.904 394 241 14 52 412 37 416 8.08e-26 110
MS.gene60548.t1 MTR_3g061390 27.411 394 252 12 52 417 34 421 1.13e-25 109
MS.gene60548.t1 MTR_8g094290 25.000 488 320 18 4 463 5 474 3.39e-25 108
MS.gene60548.t1 MTR_4g033275 46.316 95 51 0 338 432 7 101 2.76e-23 94.4
MS.gene60548.t1 MTR_5g023260 25.983 458 286 16 33 461 99 532 5.59e-23 102
MS.gene60548.t1 MTR_4g075750 24.645 422 284 13 51 450 80 489 1.72e-22 100
MS.gene60548.t1 MTR_5g096840 26.448 397 253 15 52 417 40 428 2.53e-22 99.8
MS.gene60548.t1 MTR_3g110420 23.950 476 322 15 15 460 2 467 8.56e-22 98.2
MS.gene60548.t1 MTR_3g110660 25.496 353 227 13 25 352 21 362 2.08e-20 93.2
MS.gene60548.t1 MTR_2g012470 26.990 289 192 7 22 298 77 358 2.59e-20 94.0
MS.gene60548.t1 MTR_3g069960 28.862 246 162 5 87 331 72 305 3.49e-20 92.0
MS.gene60548.t1 MTR_3g461480 26.087 391 252 16 52 412 38 421 4.17e-20 93.2
MS.gene60548.t1 MTR_1g007240 23.982 442 294 16 52 461 23 454 1.93e-19 90.9
MS.gene60548.t1 MTR_3g072870 23.702 443 283 12 45 462 44 456 6.31e-18 86.3
MS.gene60548.t1 MTR_4g073770 24.204 471 304 13 19 462 15 459 1.13e-17 85.9
MS.gene60548.t1 MTR_3g088465 25.000 360 232 14 17 349 3 351 1.25e-17 85.1
MS.gene60548.t1 MTR_3g110430 23.134 402 276 10 52 426 72 467 3.04e-15 78.2
MS.gene60548.t1 MTR_1g007180 23.789 454 280 18 52 461 23 454 3.07e-15 78.2
MS.gene60548.t1 MTR_7g067450 22.857 420 287 10 9 419 13 404 5.59e-14 74.3
MS.gene60548.t1 MTR_5g096850 24.173 393 257 14 52 412 36 419 1.74e-13 72.8
MS.gene60548.t1 MTR_3g110420 23.794 311 214 11 15 308 2 306 2.75e-13 71.2
MS.gene60548.t1 MTR_4g415390 23.438 384 255 10 45 419 51 404 1.02e-12 70.1
MS.gene60548.t1 MTR_4g415390 23.371 445 282 14 45 462 51 463 1.03e-12 70.5
MS.gene60548.t1 MTR_5g082220 22.444 450 280 14 45 462 50 462 1.23e-12 70.1
MS.gene60548.t1 MTR_5g082220 22.444 450 280 14 45 462 40 452 1.71e-12 69.7
MS.gene60548.t1 MTR_5g017200 25.778 225 150 8 52 265 39 257 1.68e-11 65.1
MS.gene60548.t1 MTR_2g031750 24.737 380 228 15 126 461 22 387 5.09e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60548.t1 AT1G08230 52.715 442 207 1 23 462 9 450 7.78e-174 495
MS.gene60548.t1 AT5G41800 49.315 438 219 3 28 463 13 449 1.92e-137 403
MS.gene60548.t1 AT1G08230 51.714 350 167 1 115 462 1 350 2.51e-132 386
MS.gene60548.t1 AT1G08230 51.672 329 157 1 136 462 3 331 1.16e-121 358
MS.gene60548.t1 AT1G08230 51.672 329 157 1 136 462 3 331 1.16e-121 358
MS.gene60548.t1 AT1G08230 51.672 329 157 1 136 462 3 331 1.16e-121 358
MS.gene60548.t1 AT5G40780 29.957 464 298 10 5 461 3 446 2.14e-57 196
MS.gene60548.t1 AT3G55740 31.148 427 273 9 41 462 28 438 6.15e-54 187
MS.gene60548.t1 AT5G40780 32.039 412 259 9 57 461 1 398 1.23e-53 185
MS.gene60548.t1 AT5G40780 32.039 412 259 9 57 461 1 398 1.23e-53 185
MS.gene60548.t1 AT1G48640 30.180 444 289 10 25 461 24 453 1.93e-53 186
MS.gene60548.t1 AT2G39890 30.607 428 274 10 41 462 31 441 4.41e-52 182
MS.gene60548.t1 AT2G39890 30.607 428 274 10 41 462 31 441 4.41e-52 182
MS.gene60548.t1 AT3G55740 31.646 395 250 8 72 462 4 382 8.92e-52 179
MS.gene60548.t1 AT3G55740 31.646 395 250 8 72 462 4 382 8.92e-52 179
MS.gene60548.t1 AT2G36590 32.710 428 265 10 41 462 25 435 5.65e-51 179
MS.gene60548.t1 AT2G39890 31.061 396 251 9 72 462 4 382 1.28e-49 174
MS.gene60548.t1 AT1G24400 28.875 471 295 12 1 461 1 441 1.57e-47 170
MS.gene60548.t1 AT1G61270 29.263 434 281 10 26 447 18 437 1.45e-46 167
MS.gene60548.t1 AT1G71680 29.004 462 300 12 12 461 3 448 4.80e-46 166
MS.gene60548.t1 AT3G01760 27.818 417 276 9 43 447 33 436 1.47e-41 154
MS.gene60548.t1 AT1G67640 29.075 454 292 10 24 461 2 441 2.80e-41 153
MS.gene60548.t1 AT1G25530 29.138 429 275 11 44 461 30 440 4.04e-38 144
MS.gene60548.t1 AT1G71680 28.242 347 230 8 12 349 3 339 5.75e-38 142
MS.gene60548.t1 AT2G36590 33.106 293 182 6 41 331 25 305 1.62e-34 132
MS.gene60548.t1 AT1G10010 26.386 451 293 13 44 462 30 473 5.29e-31 125
MS.gene60548.t1 AT1G10010 26.386 451 293 13 44 462 31 474 6.44e-31 124
MS.gene60548.t1 AT5G09220 26.386 451 279 16 52 463 56 492 9.54e-31 124
MS.gene60548.t1 AT5G63850 25.333 450 285 15 52 463 29 465 1.10e-28 118
MS.gene60548.t1 AT1G77380 25.571 438 292 11 52 460 40 472 2.65e-27 114
MS.gene60548.t1 AT1G58360 23.750 480 322 14 13 460 13 480 1.70e-26 112
MS.gene60548.t1 AT1G44100 25.383 457 281 16 52 463 38 479 1.24e-25 109
MS.gene60548.t1 AT5G49630 25.635 433 267 15 17 409 10 427 4.65e-23 102
MS.gene60548.t1 AT4G35180 25.349 430 290 14 43 455 59 474 6.22e-21 95.5
MS.gene60548.t1 AT1G47670 24.501 351 235 10 18 349 69 408 1.05e-19 92.0
MS.gene60548.t1 AT5G23810 26.119 402 236 15 52 409 36 420 7.25e-17 83.2
MS.gene60548.t1 AT4G35180 27.612 268 172 9 43 298 59 316 7.06e-16 79.0
MS.gene60548.t1 AT1G77690 23.202 431 290 11 14 433 18 418 2.17e-15 78.6
MS.gene60548.t1 AT2G21050 23.501 417 276 11 12 419 16 398 5.84e-15 77.4
MS.gene60548.t1 AT2G38120 22.892 415 276 11 14 419 25 404 3.09e-12 68.6
MS.gene60548.t1 AT2G38120 22.363 474 308 14 14 462 25 463 3.28e-12 68.9
MS.gene60548.t1 AT5G23810 26.625 323 192 13 52 346 36 341 2.44e-11 65.5

Find 93 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAACTAACCTGGATTTC+TGG 0.197396 1.2:+68786581 None:intergenic
GTGTTGCTATCTCTGGTTAT+TGG 0.236584 1.2:-68785807 MS.gene60548:CDS
CTCCACATATAATGATAAAT+TGG 0.244397 1.2:+68786940 None:intergenic
ATATGCTTTGGGACAGTAAT+TGG 0.247452 1.2:-68787147 MS.gene60548:CDS
GCCATTCTTTCCAGATATAA+TGG 0.250563 1.2:-68785083 MS.gene60548:CDS
GTTGGTTTGGAGGAGTAATT+TGG 0.258662 1.2:-68787837 MS.gene60548:CDS
TTCACTCTTCTGGGTTGGTT+TGG 0.267371 1.2:-68787850 MS.gene60548:CDS
ATTGAAAACTGTCCTTTCTT+TGG 0.270053 1.2:+68785178 None:intergenic
CCAAACAATGCCATTATATC+TGG 0.276029 1.2:+68785073 None:intergenic
TAAAGCTTCATTGATCCTTC+TGG 0.278033 1.2:+68786963 None:intergenic
TGGAGTTGTAACTATGCTTT+TGG 0.281191 1.2:-68786922 MS.gene60548:CDS
ATCTCTGGTTATTGGGCATT+TGG 0.283481 1.2:-68785799 MS.gene60548:CDS
CCAAACAAGGCATAATCTAT+TGG 0.285091 1.2:-68784982 MS.gene60548:CDS
TGTTGCTATCTCTGGTTATT+GGG 0.292003 1.2:-68785806 MS.gene60548:CDS
CCAAGAGAGTATTCTGTAAA+AGG 0.297812 1.2:-68786680 MS.gene60548:CDS
CCCAGAAGAGTGAATGAAAA+TGG 0.300763 1.2:+68787859 None:intergenic
CCAATAGATTATGCCTTGTT+TGG 0.304670 1.2:+68784982 None:intergenic
GATTCAAATAATTCATTTGT+TGG 0.306422 1.2:+68785214 None:intergenic
TTCAATTTATCATATGCTTT+GGG 0.330472 1.2:-68787158 MS.gene60548:CDS
GTAATTTGGTTGGTCCTTGC+AGG 0.336273 1.2:-68787823 MS.gene60548:CDS
CCAGATATAATGGCATTGTT+TGG 0.340494 1.2:-68785073 MS.gene60548:CDS
CTTCAATTTATCATATGCTT+TGG 0.341049 1.2:-68787159 MS.gene60548:CDS
CTCATCCTTCTTCAAGTCTT+CGG 0.352088 1.2:-68785688 MS.gene60548:CDS
ACTCTTCTGGGTTGGTTTGG+AGG 0.360871 1.2:-68787847 MS.gene60548:CDS
TATTGGGTGAATACATTGAT+TGG 0.369575 1.2:-68784965 MS.gene60548:CDS
TATTTCAGTGTTGCTATCTC+TGG 0.372416 1.2:-68785814 MS.gene60548:CDS
CCAGTTTAGATTCAGAGATA+TGG 0.379682 1.2:-68787731 MS.gene60548:CDS
CAAACAAGGCATAATCTATT+GGG 0.383365 1.2:-68784981 MS.gene60548:CDS
CCATATCTCTGAATCTAAAC+TGG 0.388069 1.2:+68787731 None:intergenic
CAAAACTATTGCTTCCCAAA+TGG 0.410549 1.2:-68785732 MS.gene60548:CDS
CAATTCTTGCTAACTACATT+GGG 0.412959 1.2:-68785759 MS.gene60548:CDS
TATACAAGTGATAGTGAAAA+GGG 0.415951 1.2:-68788120 MS.gene60548:CDS
GCCATTATATCTGGAAAGAA+TGG 0.421778 1.2:+68785082 None:intergenic
TTTCATTCACTCTTCTGGGT+TGG 0.422245 1.2:-68787855 MS.gene60548:CDS
AAGTTTGTTCTTGTTTCTAA+AGG 0.431928 1.2:-68788045 MS.gene60548:intron
AGATGGGCAAAATACTATAT+AGG 0.433545 1.2:-68787186 MS.gene60548:CDS
AAACTGTTTGGTGTCTTCAA+TGG 0.434041 1.2:-68786644 MS.gene60548:CDS
TGGGCATTTGGAAATGCATC+TGG 0.435496 1.2:-68785787 MS.gene60548:CDS
ACAATTCTTGCTAACTACAT+TGG 0.436770 1.2:-68785760 MS.gene60548:CDS
GTAATTGGTGGTCCTCTTGT+GGG 0.436804 1.2:-68787132 MS.gene60548:CDS
TCTCATGAAGATAAACTGTT+TGG 0.440619 1.2:-68786656 MS.gene60548:CDS
ATATACAAGTGATAGTGAAA+AGG 0.456820 1.2:-68788121 MS.gene60548:CDS
TACCAATTTATCATTATATG+TGG 0.457634 1.2:-68786942 MS.gene60548:CDS
ATCCTTCTGGATGGTAAAGT+TGG 0.467861 1.2:+68786976 None:intergenic
TTGTTCCAAGGGTGCTCTCT+AGG 0.470573 1.2:-68785147 MS.gene60548:CDS
AGTAATTGGTGGTCCTCTTG+TGG 0.471430 1.2:-68787133 MS.gene60548:CDS
TAGATTATGCCTTGTTTGGA+AGG 0.476875 1.2:+68784986 None:intergenic
TCATTTGACAACATCTATTG+TGG 0.482815 1.2:-68787902 MS.gene60548:CDS
CATTTGACAACATCTATTGT+GGG 0.484467 1.2:-68787901 MS.gene60548:CDS
CAATGCGCAATGTTGTTCCA+AGG 0.494420 1.2:-68785159 MS.gene60548:CDS
AACTTTGGCACCTCCTGTGA+AGG 0.500740 1.2:-68785887 MS.gene60548:CDS
AAGAAGGATGAGTATATTAG+TGG 0.500852 1.2:+68785699 None:intergenic
TGGGATTATTCCAGAAATCC+AGG 0.501151 1.2:-68786591 MS.gene60548:intron
AATGGAAGTGTAAGAATCAC+TGG 0.501324 1.2:+68787877 None:intergenic
CCCTATCACAACTAAAATTG+AGG 0.506614 1.2:+68784934 None:intergenic
TTTACAGAATACTCTCTTGG+CGG 0.514332 1.2:+68786683 None:intergenic
GTGAATACATTGATTGGAGG+AGG 0.520319 1.2:-68784959 MS.gene60548:CDS
ATTGACCTAGAGAGCACCCT+TGG 0.527945 1.2:+68785142 None:intergenic
AATAATCCCACTAGCATATG+TGG 0.533821 1.2:+68786604 None:intergenic
TATCTCAAGGAGTGAAAGGA+TGG 0.534203 1.2:+68786891 None:intergenic
TATGCAACATTTCTCACTAT+CGG 0.535238 1.2:-68786834 MS.gene60548:CDS
TGTTGTGGCAGGACCAAGAT+GGG 0.545193 1.2:-68787202 MS.gene60548:intron
CTCTGAATCTAAACTGGCGG+CGG 0.546660 1.2:+68787737 None:intergenic
TTAGAACATCATGCTCAACT+TGG 0.548316 1.2:-68787760 MS.gene60548:CDS
AGACTCTTTCCTCCCACAAG+AGG 0.553648 1.2:+68787120 None:intergenic
TGGGTGAATACATTGATTGG+AGG 0.555938 1.2:-68784962 MS.gene60548:CDS
TGCTTTGGGACAGTAATTGG+TGG 0.556122 1.2:-68787144 MS.gene60548:CDS
ACTTCACCTGAGTTAGATGC+AGG 0.556542 1.2:-68788072 MS.gene60548:CDS
AATGTATCTCAAGGAGTGAA+AGG 0.559352 1.2:+68786887 None:intergenic
AATGCGCAATGTTGTTCCAA+GGG 0.561895 1.2:-68785158 MS.gene60548:CDS
ACTTTCAAGCCTTCCAAACA+AGG 0.562223 1.2:-68784995 MS.gene60548:CDS
GTTTGGAGGAGTAATTTGGT+TGG 0.564814 1.2:-68787833 MS.gene60548:CDS
AATCAGATTAATGTATCTCA+AGG 0.567736 1.2:+68786878 None:intergenic
TACCAACTTTACCATCCAGA+AGG 0.580856 1.2:-68786978 MS.gene60548:CDS
AGCATATGATAAATTGAAGA+GGG 0.583245 1.2:+68787163 None:intergenic
ATCTAACTCAGGTGAAGTAG+AGG 0.591866 1.2:+68788077 None:intergenic
TTGCTACCACATATGCTAGT+GGG 0.592496 1.2:-68786610 MS.gene60548:CDS
TTTGCTCCTGCATCTAACTC+AGG 0.601599 1.2:+68788066 None:intergenic
ATTGCTACCACATATGCTAG+TGG 0.604816 1.2:-68786611 MS.gene60548:CDS
TCAATCCGAAGACTTGAAGA+AGG 0.606882 1.2:+68785683 None:intergenic
ACTTTGGCACCTCCTGTGAA+GGG 0.608006 1.2:-68785886 MS.gene60548:CDS
ATTGGCAAAATGAAATCTAG+AGG 0.608137 1.2:+68785034 None:intergenic
AAGCATATGATAAATTGAAG+AGG 0.610873 1.2:+68787162 None:intergenic
ATGTTGTGGCAGGACCAAGA+TGG 0.614341 1.2:-68787203 MS.gene60548:intron
GCTTCATTGATCCTTCTGGA+TGG 0.631067 1.2:+68786967 None:intergenic
TGTGGGAGGAAAGAGTCTCA+AGG 0.646216 1.2:-68787115 MS.gene60548:intron
TGAATACATTGATTGGAGGA+GGG 0.653687 1.2:-68784958 MS.gene60548:CDS
TCAAGTCTTCGGATTGACTG+CGG 0.656105 1.2:-68785677 MS.gene60548:intron
TATCTCTGAATCTAAACTGG+CGG 0.664050 1.2:+68787734 None:intergenic
AGAATGTGATCACTCCTGCA+AGG 0.671411 1.2:+68787809 None:intergenic
ATTGGTGGTCCTCTTGTGGG+AGG 0.671489 1.2:-68787129 MS.gene60548:CDS
GTAGGATCATGGTTACACTG+TGG 0.750740 1.2:-68787928 MS.gene60548:intron
ACTATCGGCTCGATATACGT+CGG 0.751699 1.2:-68786819 MS.gene60548:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTAATTAATTTACTATA+TGG - chr1.2:68785052-68785071 MS.gene60548:CDS 10.0%
!! AATTAATTTACTATATGGTT+TGG - chr1.2:68785057-68785076 MS.gene60548:CDS 15.0%
!! ATAAGCATTACTATATAATA+AGG + chr1.2:68787663-68787682 None:intergenic 15.0%
!!! GAATTATTTGAATCAATTTT+CGG - chr1.2:68787816-68787835 MS.gene60548:CDS 15.0%
!! AAATCAAAATCACTTTACAT+TGG - chr1.2:68786714-68786733 MS.gene60548:intron 20.0%
!! AGAGTTTATGTTATATATGT+TGG - chr1.2:68787513-68787532 MS.gene60548:intron 20.0%
!! ATACATTCATGTAAATGTAA+AGG - chr1.2:68786838-68786857 MS.gene60548:CDS 20.0%
!! GATTCAAATAATTCATTTGT+TGG + chr1.2:68787810-68787829 None:intergenic 20.0%
!! GTTATATTGTAAAAAACCAT+TGG + chr1.2:68788008-68788027 None:intergenic 20.0%
!! TACCAATTTATCATTATATG+TGG - chr1.2:68786079-68786098 MS.gene60548:intron 20.0%
!! TCTAACTTAAAGTTAGAATT+TGG + chr1.2:68786892-68786911 None:intergenic 20.0%
!! TTATAACTTGATTATATTGC+AGG - chr1.2:68787773-68787792 MS.gene60548:CDS 20.0%
!! TTCAATTTATCATATGCTTT+GGG - chr1.2:68785863-68785882 MS.gene60548:CDS 20.0%
!!! AAAGAAAGAAAAGTACTAAA+AGG + chr1.2:68785350-68785369 None:intergenic 20.0%
!!! AATGTAAAGTGATTTTGATT+TGG + chr1.2:68786715-68786734 None:intergenic 20.0%
!!! AGAATTGATTTTGACATTTT+TGG - chr1.2:68786559-68786578 MS.gene60548:intron 20.0%
! AAGCATATGATAAATTGAAG+AGG + chr1.2:68785862-68785881 None:intergenic 25.0%
! AAGTTAAAAATCGATTGTAG+AGG + chr1.2:68786655-68786674 None:intergenic 25.0%
! AATCAGATTAATGTATCTCA+AGG + chr1.2:68786146-68786165 None:intergenic 25.0%
! AGCATATGATAAATTGAAGA+GGG + chr1.2:68785861-68785880 None:intergenic 25.0%
! ATGACATCTTCCAATAATTT+CGG + chr1.2:68786944-68786963 None:intergenic 25.0%
! ATGTATATGCATAACAGTTT+AGG + chr1.2:68787378-68787397 None:intergenic 25.0%
! CACAACTAAATATTTGTGTT+TGG + chr1.2:68787016-68787035 None:intergenic 25.0%
! CTCCACATATAATGATAAAT+TGG + chr1.2:68786084-68786103 None:intergenic 25.0%
! CTTATACTATAGTTTCACTA+AGG - chr1.2:68785987-68786006 MS.gene60548:intron 25.0%
! CTTCAATTTATCATATGCTT+TGG - chr1.2:68785862-68785881 MS.gene60548:CDS 25.0%
! GAAACTATAGTATAAGAATG+TGG + chr1.2:68785983-68786002 None:intergenic 25.0%
! GAACTTATTTATAGCTTAGT+TGG - chr1.2:68787438-68787457 MS.gene60548:intron 25.0%
! GATCATTTCAGAAACTAAAT+TGG + chr1.2:68785521-68785540 None:intergenic 25.0%
! TAAATGTACATGTTACTGTT+TGG - chr1.2:68787476-68787495 MS.gene60548:intron 25.0%
! TAGAGAACAAATGTTGTAAA+TGG - chr1.2:68786481-68786500 MS.gene60548:intron 25.0%
! TCAAGTTATAATCATTCATC+AGG + chr1.2:68787764-68787783 None:intergenic 25.0%
! TCTCAAGGTAATAACATAAA+AGG - chr1.2:68785921-68785940 MS.gene60548:intron 25.0%
! TGAATGTATCAAAACGTTAA+TGG + chr1.2:68786827-68786846 None:intergenic 25.0%
! TTATTTCAATAAAGCTTCGA+TGG - chr1.2:68787551-68787570 MS.gene60548:intron 25.0%
! TTGGTTATTCTAAACTCAAA+AGG + chr1.2:68787062-68787081 None:intergenic 25.0%
!! AATTGAGATTGTAGCTTTTA+AGG - chr1.2:68785660-68785679 MS.gene60548:intron 25.0%
!! ATATACAAGTGATAGTGAAA+AGG - chr1.2:68784900-68784919 MS.gene60548:CDS 25.0%
!! GCTTTATTGAAATAAGCTTA+AGG + chr1.2:68787546-68787565 None:intergenic 25.0%
!! TATACAAGTGATAGTGAAAA+GGG - chr1.2:68784901-68784920 MS.gene60548:CDS 25.0%
!! TCAATTTTGCGATTCAAATT+CGG - chr1.2:68787401-68787420 MS.gene60548:intron 25.0%
!! TCGTTGTTGTTATTAATCAT+TGG - chr1.2:68785371-68785390 MS.gene60548:intron 25.0%
!! TTTGGTTGTGTATATTTTGT+AGG - chr1.2:68785075-68785094 MS.gene60548:CDS 25.0%
!!! AAGTTTGTTCTTGTTTCTAA+AGG - chr1.2:68784976-68784995 MS.gene60548:CDS 25.0%
!!! CACTTTAGAAACAATTTTGA+AGG + chr1.2:68786610-68786629 None:intergenic 25.0%
!!! TAATTTGCTTGAAAATGTTG+TGG - chr1.2:68785804-68785823 MS.gene60548:CDS 25.0%
!!! TCTCTAAAATTGTATACAGT+AGG + chr1.2:68785692-68785711 None:intergenic 25.0%
AAAATTGTATACAGTAGGCA+AGG + chr1.2:68785687-68785706 None:intergenic 30.0%
AACAAAATGCAAAACTAACC+TGG + chr1.2:68786451-68786470 None:intergenic 30.0%
AAGAAGGATGAGTATATTAG+TGG + chr1.2:68787325-68787344 None:intergenic 30.0%
ACAATTCTTGCTAACTACAT+TGG - chr1.2:68787261-68787280 MS.gene60548:intron 30.0%
ACCTATGTCTATTATCAAAG+AGG + chr1.2:68787597-68787616 None:intergenic 30.0%
AGATAAAAACACAATGGCAT+TGG - chr1.2:68786230-68786249 MS.gene60548:intron 30.0%
AGATGGGCAAAATACTATAT+AGG - chr1.2:68785835-68785854 MS.gene60548:CDS 30.0%
ATATGAGTACGAATCAAACT+CGG + chr1.2:68785464-68785483 None:intergenic 30.0%
ATTGAAAACTGTCCTTTCTT+TGG + chr1.2:68787846-68787865 None:intergenic 30.0%
ATTGGCAAAATGAAATCTAG+AGG + chr1.2:68787990-68788009 None:intergenic 30.0%
CAAACAAGGCATAATCTATT+GGG - chr1.2:68788040-68788059 MS.gene60548:intron 30.0%
CAATTCTTGCTAACTACATT+GGG - chr1.2:68787262-68787281 MS.gene60548:intron 30.0%
CATTTGACAACATCTATTGT+GGG - chr1.2:68785120-68785139 MS.gene60548:CDS 30.0%
GTAAGGAGATAAAAACACAA+TGG - chr1.2:68786224-68786243 MS.gene60548:intron 30.0%
TATGCAACATTTCTCACTAT+CGG - chr1.2:68786187-68786206 MS.gene60548:intron 30.0%
TATTGGGTGAATACATTGAT+TGG - chr1.2:68788056-68788075 MS.gene60548:CDS 30.0%
TCAATTCTACCCGAAATTAT+TGG - chr1.2:68786931-68786950 MS.gene60548:CDS 30.0%
TCATTTGACAACATCTATTG+TGG - chr1.2:68785119-68785138 MS.gene60548:CDS 30.0%
TCTCATGAAGATAAACTGTT+TGG - chr1.2:68786365-68786384 MS.gene60548:intron 30.0%
TGACATCTTCCAATAATTTC+GGG + chr1.2:68786943-68786962 None:intergenic 30.0%
TGGATACATTCACTGAAAAA+TGG + chr1.2:68786695-68786714 None:intergenic 30.0%
! ATATAGTATTTTGCCCATCT+TGG + chr1.2:68785835-68785854 None:intergenic 30.0%
! CAATTCTTGTGCAATTTTGT+AGG - chr1.2:68787110-68787129 MS.gene60548:intron 30.0%
! CAATTTTGCGATTCAAATTC+GGG - chr1.2:68787402-68787421 MS.gene60548:intron 30.0%
! GATATGGCTAGAGATATTTT+AGG - chr1.2:68785306-68785325 MS.gene60548:intron 30.0%
! GTGTATATTTTGTAGGATCA+TGG - chr1.2:68785082-68785101 MS.gene60548:CDS 30.0%
! TCCTCTTTGATAATAGACAT+AGG - chr1.2:68787593-68787612 MS.gene60548:intron 30.0%
! TCTAGATTTCATTTTGCCAA+TGG - chr1.2:68787989-68788008 MS.gene60548:intron 30.0%
!!! CCTCAATTTTAGTTGTGATA+GGG - chr1.2:68788087-68788106 MS.gene60548:CDS 30.0%
!!! CTCAATTTTAGTTGTGATAG+GGG - chr1.2:68788088-68788107 MS.gene60548:CDS 30.0%
!!! TCAATTTTAGTTGTGATAGG+GGG - chr1.2:68788089-68788108 MS.gene60548:CDS 30.0%
!!! TCCTCAATTTTAGTTGTGAT+AGG - chr1.2:68788086-68788105 MS.gene60548:CDS 30.0%
AATAATCCCACTAGCATATG+TGG + chr1.2:68786420-68786439 None:intergenic 35.0%
AATGTATCTCAAGGAGTGAA+AGG + chr1.2:68786137-68786156 None:intergenic 35.0%
AATTTCGTCTCCTACAAAAG+TGG - chr1.2:68786988-68787007 MS.gene60548:intron 35.0%
AGTGGTCAAGAAAAACCATT+TGG + chr1.2:68787307-68787326 None:intergenic 35.0%
CAAAACTATTGCTTCCCAAA+TGG - chr1.2:68787289-68787308 MS.gene60548:intron 35.0%
CCAAACAAGGCATAATCTAT+TGG - chr1.2:68788039-68788058 MS.gene60548:intron 35.0%
CCAAACAATGCCATTATATC+TGG + chr1.2:68787951-68787970 None:intergenic 35.0%
CCAGATATAATGGCATTGTT+TGG - chr1.2:68787948-68787967 MS.gene60548:intron 35.0%
CCAGTTTAGATTCAGAGATA+TGG - chr1.2:68785290-68785309 MS.gene60548:intron 35.0%
CCATATCTCTGAATCTAAAC+TGG + chr1.2:68785293-68785312 None:intergenic 35.0%
CCCTATCACAACTAAAATTG+AGG + chr1.2:68788090-68788109 None:intergenic 35.0%
GCCATTATATCTGGAAAGAA+TGG + chr1.2:68787942-68787961 None:intergenic 35.0%
GCCATTCTTTCCAGATATAA+TGG - chr1.2:68787938-68787957 MS.gene60548:intron 35.0%
GTGAAGGGAAAAATGTTCAA+AGG - chr1.2:68787150-68787169 MS.gene60548:CDS 35.0%
GTGGTCAAGAAAAACCATTT+GGG + chr1.2:68787306-68787325 None:intergenic 35.0%
TAAAGCTTCATTGATCCTTC+TGG + chr1.2:68786061-68786080 None:intergenic 35.0%
TAATCATTGGACCATTGTTG+AGG - chr1.2:68785384-68785403 MS.gene60548:intron 35.0%
TATCTCTGAATCTAAACTGG+CGG + chr1.2:68785290-68785309 None:intergenic 35.0%
TGTTGCTATCTCTGGTTATT+GGG - chr1.2:68787215-68787234 MS.gene60548:intron 35.0%
TTAGAACATCATGCTCAACT+TGG - chr1.2:68785261-68785280 MS.gene60548:intron 35.0%
TTTACAGAATACTCTCTTGG+CGG + chr1.2:68786341-68786360 None:intergenic 35.0%
! AACTAAATTGGTGATTCGCT+CGG + chr1.2:68785509-68785528 None:intergenic 35.0%
! AATGGAAGTGTAAGAATCAC+TGG + chr1.2:68785147-68785166 None:intergenic 35.0%
! ATTTTCGGAGATCCAAAGAA+AGG - chr1.2:68787831-68787850 MS.gene60548:CDS 35.0%
! CCAATAGATTATGCCTTGTT+TGG + chr1.2:68788042-68788061 None:intergenic 35.0%
! CCATTTTCATTCACTCTTCT+GGG - chr1.2:68785162-68785181 MS.gene60548:CDS 35.0%
! CCTTTTACAGAATACTCTCT+TGG + chr1.2:68786344-68786363 None:intergenic 35.0%
! TATTTCAGTGTTGCTATCTC+TGG - chr1.2:68787207-68787226 MS.gene60548:intron 35.0%
! TCCATTTTCATTCACTCTTC+TGG - chr1.2:68785161-68785180 MS.gene60548:CDS 35.0%
! TGAATACATTGATTGGAGGA+GGG - chr1.2:68788063-68788082 MS.gene60548:CDS 35.0%
! TGCAATTTTGTAGGCAACTT+TGG - chr1.2:68787119-68787138 MS.gene60548:CDS 35.0%
! TGGAGTTGTAACTATGCTTT+TGG - chr1.2:68786099-68786118 MS.gene60548:intron 35.0%
! TTGAACATTTTTCCCTTCAC+AGG + chr1.2:68787150-68787169 None:intergenic 35.0%
!! AAACTGTTTGGTGTCTTCAA+TGG - chr1.2:68786377-68786396 MS.gene60548:intron 35.0%
!! AATTGACTGTGTTGATTGCA+TGG - chr1.2:68786288-68786307 MS.gene60548:intron 35.0%
!! ATATGCTTTGGGACAGTAAT+TGG - chr1.2:68785874-68785893 MS.gene60548:CDS 35.0%
!! CCAAGAGAGTATTCTGTAAA+AGG - chr1.2:68786341-68786360 MS.gene60548:intron 35.0%
!! TAGATTATGCCTTGTTTGGA+AGG + chr1.2:68788038-68788057 None:intergenic 35.0%
AATGCGCAATGTTGTTCCAA+GGG - chr1.2:68787863-68787882 MS.gene60548:CDS 40.0%
ACTTTCAAGCCTTCCAAACA+AGG - chr1.2:68788026-68788045 MS.gene60548:intron 40.0%
AGTCACTTGACATGTGCATT+TGG + chr1.2:68787081-68787100 None:intergenic 40.0%
ATCCTTCTGGATGGTAAAGT+TGG + chr1.2:68786048-68786067 None:intergenic 40.0%
ATCTAACTCAGGTGAAGTAG+AGG + chr1.2:68784947-68784966 None:intergenic 40.0%
ATCTCTGGTTATTGGGCATT+TGG - chr1.2:68787222-68787241 MS.gene60548:intron 40.0%
ATTGCTACCACATATGCTAG+TGG - chr1.2:68786410-68786429 MS.gene60548:intron 40.0%
CAACATTGCTGCAAAAAGTG+TGG + chr1.2:68787919-68787938 None:intergenic 40.0%
CCCAGAAGAGTGAATGAAAA+TGG + chr1.2:68785165-68785184 None:intergenic 40.0%
CTCATCCTTCTTCAAGTCTT+CGG - chr1.2:68787333-68787352 MS.gene60548:intron 40.0%
GCAAAACTAACCTGGATTTC+TGG + chr1.2:68786443-68786462 None:intergenic 40.0%
GGAGACGAAATTCATTCTAG+AGG + chr1.2:68786980-68786999 None:intergenic 40.0%
GTTTGGAGGAGTAATTTGGT+TGG - chr1.2:68785188-68785207 MS.gene60548:CDS 40.0%
TACCAACTTTACCATCCAGA+AGG - chr1.2:68786043-68786062 MS.gene60548:intron 40.0%
TATCTCAAGGAGTGAAAGGA+TGG + chr1.2:68786133-68786152 None:intergenic 40.0%
TCAATCCGAAGACTTGAAGA+AGG + chr1.2:68787341-68787360 None:intergenic 40.0%
TGGGATTATTCCAGAAATCC+AGG - chr1.2:68786430-68786449 MS.gene60548:intron 40.0%
TTGCTACCACATATGCTAGT+GGG - chr1.2:68786411-68786430 MS.gene60548:intron 40.0%
TTGCTTGAAAATGTTGTGGC+AGG - chr1.2:68785808-68785827 MS.gene60548:CDS 40.0%
TTTCATTCACTCTTCTGGGT+TGG - chr1.2:68785166-68785185 MS.gene60548:CDS 40.0%
! AACATTTTTCCCTTCACAGG+AGG + chr1.2:68787147-68787166 None:intergenic 40.0%
! GTGAATACATTGATTGGAGG+AGG - chr1.2:68788062-68788081 MS.gene60548:CDS 40.0%
! GTGTTGCTATCTCTGGTTAT+TGG - chr1.2:68787214-68787233 MS.gene60548:intron 40.0%
! TGGGTGAATACATTGATTGG+AGG - chr1.2:68788059-68788078 MS.gene60548:CDS 40.0%
!! GACTCACTTTTGTGTGTACT+TGG - chr1.2:68786736-68786755 MS.gene60548:intron 40.0%
!! GTGTTTGGTTCCACTTTTGT+AGG + chr1.2:68787001-68787020 None:intergenic 40.0%
!! GTTGCTTTGTTTGTTGGACA+CGG - chr1.2:68785724-68785743 MS.gene60548:CDS 40.0%
!! GTTGGTTTGGAGGAGTAATT+TGG - chr1.2:68785184-68785203 MS.gene60548:CDS 40.0%
!! TGATGCGTTGCTTTGTTTGT+TGG - chr1.2:68785718-68785737 MS.gene60548:CDS 40.0%
!! TGTTTCGAACCTTTGAAGCA+CGG + chr1.2:68785780-68785799 None:intergenic 40.0%
!! TTTGTGTGTACTTGGTTCTG+CGG - chr1.2:68786744-68786763 MS.gene60548:intron 40.0%
ACTTCACCTGAGTTAGATGC+AGG - chr1.2:68784949-68784968 MS.gene60548:CDS 45.0%
AGAATGTGATCACTCCTGCA+AGG + chr1.2:68785215-68785234 None:intergenic 45.0%
CAATGCGCAATGTTGTTCCA+AGG - chr1.2:68787862-68787881 MS.gene60548:CDS 45.0%
GCTTCATTGATCCTTCTGGA+TGG + chr1.2:68786057-68786076 None:intergenic 45.0%
GTAGGATCATGGTTACACTG+TGG - chr1.2:68785093-68785112 MS.gene60548:CDS 45.0%
GTGATTCGCTCGGTTCAATA+AGG + chr1.2:68785499-68785518 None:intergenic 45.0%
TCAAGTCTTCGGATTGACTG+CGG - chr1.2:68787344-68787363 MS.gene60548:intron 45.0%
TGGGCATTTGGAAATGCATC+TGG - chr1.2:68787234-68787253 MS.gene60548:intron 45.0%
TTGATTGCATGGTCCAATGC+AGG - chr1.2:68786299-68786318 MS.gene60548:intron 45.0%
TTGCGATTCAAATTCGGGTG+CGG - chr1.2:68787407-68787426 MS.gene60548:intron 45.0%
TTTGCTCCTGCATCTAACTC+AGG + chr1.2:68784958-68784977 None:intergenic 45.0%
! AGTAATTGGTGGTCCTCTTG+TGG - chr1.2:68785888-68785907 MS.gene60548:CDS 45.0%
! ATCTTTCGAGTGACCTGCAT+TGG + chr1.2:68786315-68786334 None:intergenic 45.0%
! GTAATTGGTGGTCCTCTTGT+GGG - chr1.2:68785889-68785908 MS.gene60548:CDS 45.0%
! GTAATTTGGTTGGTCCTTGC+AGG - chr1.2:68785198-68785217 MS.gene60548:CDS 45.0%
! TTGTTTGTTGGACACGGACA+TGG - chr1.2:68785730-68785749 MS.gene60548:CDS 45.0%
!! ACTATCGGCTCGATATACGT+CGG - chr1.2:68786202-68786221 MS.gene60548:intron 45.0%
!! TGCTTTGGGACAGTAATTGG+TGG - chr1.2:68785877-68785896 MS.gene60548:CDS 45.0%
!! TTCACTCTTCTGGGTTGGTT+TGG - chr1.2:68785171-68785190 MS.gene60548:CDS 45.0%
AACTTTGGCACCTCCTGTGA+AGG - chr1.2:68787134-68787153 MS.gene60548:CDS 50.0%
ACTTTGGCACCTCCTGTGAA+GGG - chr1.2:68787135-68787154 MS.gene60548:CDS 50.0%
AGACTCTTTCCTCCCACAAG+AGG + chr1.2:68785904-68785923 None:intergenic 50.0%
ATGTTGTGGCAGGACCAAGA+TGG - chr1.2:68785818-68785837 MS.gene60548:CDS 50.0%
CTCTGAATCTAAACTGGCGG+CGG + chr1.2:68785287-68785306 None:intergenic 50.0%
CTTGCGCTAGACCTCAACAA+TGG + chr1.2:68785398-68785417 None:intergenic 50.0%
TGCGATTCAAATTCGGGTGC+GGG - chr1.2:68787408-68787427 MS.gene60548:intron 50.0%
TGTGGGAGGAAAGAGTCTCA+AGG - chr1.2:68785906-68785925 MS.gene60548:intron 50.0%
TGTTGTGGCAGGACCAAGAT+GGG - chr1.2:68785819-68785838 MS.gene60548:CDS 50.0%
TTGTTGAGGTCTAGCGCAAG+TGG - chr1.2:68785398-68785417 MS.gene60548:intron 50.0%
!! ACTCTTCTGGGTTGGTTTGG+AGG - chr1.2:68785174-68785193 MS.gene60548:CDS 50.0%
!! ATTGACCTAGAGAGCACCCT+TGG + chr1.2:68787882-68787901 None:intergenic 50.0%
!! TTGTTCCAAGGGTGCTCTCT+AGG - chr1.2:68787874-68787893 MS.gene60548:CDS 50.0%
CGGCTCGATATACGTCGGTA+AGG - chr1.2:68786207-68786226 MS.gene60548:intron 55.0%
TGAGGTCTAGCGCAAGTGGT+TGG - chr1.2:68785402-68785421 MS.gene60548:intron 55.0%
! ATTGGTGGTCCTCTTGTGGG+AGG - chr1.2:68785892-68785911 MS.gene60548:CDS 55.0%
!! CAGAGGTGTCCGTGCTTCAA+AGG - chr1.2:68785768-68785787 MS.gene60548:CDS 55.0%
!! CTTTGAAGCACGGACACCTC+TGG + chr1.2:68785770-68785789 None:intergenic 55.0%
!! GCACGGACACCTCTGGAATT+AGG + chr1.2:68785763-68785782 None:intergenic 55.0%
GGCGACACGCCTAATTCCAG+AGG - chr1.2:68785751-68785770 MS.gene60548:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 68784868 68788175 68784868 ID=MS.gene60548
chr1.2 mRNA 68784868 68788175 68784868 ID=MS.gene60548.t1;Parent=MS.gene60548
chr1.2 exon 68788046 68788175 68788046 ID=MS.gene60548.t1.exon1;Parent=MS.gene60548.t1
chr1.2 CDS 68788046 68788175 68788046 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
chr1.2 exon 68787716 68787946 68787716 ID=MS.gene60548.t1.exon2;Parent=MS.gene60548.t1
chr1.2 CDS 68787716 68787946 68787716 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
chr1.2 exon 68787116 68787213 68787116 ID=MS.gene60548.t1.exon3;Parent=MS.gene60548.t1
chr1.2 CDS 68787116 68787213 68787116 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
chr1.2 exon 68786820 68787006 68786820 ID=MS.gene60548.t1.exon4;Parent=MS.gene60548.t1
chr1.2 CDS 68786820 68787006 68786820 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
chr1.2 exon 68786592 68786722 68786592 ID=MS.gene60548.t1.exon5;Parent=MS.gene60548.t1
chr1.2 CDS 68786592 68786722 68786592 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
chr1.2 exon 68785678 68785911 68785678 ID=MS.gene60548.t1.exon6;Parent=MS.gene60548.t1
chr1.2 CDS 68785678 68785911 68785678 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
chr1.2 exon 68784868 68785248 68784868 ID=MS.gene60548.t1.exon7;Parent=MS.gene60548.t1
chr1.2 CDS 68784868 68785248 68784868 ID=cds.MS.gene60548.t1;Parent=MS.gene60548.t1
Gene Sequence

>MS.gene60548

ATGGGAACTGCTGCTCAAAGCTCTTCAGAAATATATACAAGTGATAGTGAAAAGGGTTTTGCAATCAATCATGAGTCCTCTACTTCACCTGAGTTAGATGCAGGAGCAAAGTTTGTTCTTGTTTCTAAAGGTTAGTATTGAATTATTGAACTATATATTATTACTTTGTTATGTTATGTTATGTTGATTAATTAATTTACTATATGGTTTGGTTGTGTATATTTTGTAGGATCATGGTTACACTGTGGTTATCATTTGACAACATCTATTGTGGGACCAGTGATTCTTACACTTCCATTTTCATTCACTCTTCTGGGTTGGTTTGGAGGAGTAATTTGGTTGGTCCTTGCAGGAGTGATCACATTCTATTCATATAATCTTTTATCTATTGTCTTAGAACATCATGCTCAACTTGGCCGCCGCCAGTTTAGATTCAGAGATATGGCTAGAGATATTTTAGGTGAATTTCTATTCACTTTCCTTTTAGTACTTTTCTTTCTTTTTCGTTGTTGTTATTAATCATTGGACCATTGTTGAGGTCTAGCGCAAGTGGTTGGTGCGTAGTGTGTGTGAGTGTTGTAAACATCAAAGTGCCGAGTTTGATTCGTACTCATATAAGCACAATATTCCTTATTGAACCGAGCGAATCACCAATTTAGTTTCTGAAATGATCGTTGAAATTGAAAATTCGTAATCGCATTAGTCTTTCTAAAACAATTTTAGAGACTAAATCGACTCGCTCAAAACGACTAATGTAATTAAGAATTTTCAATTTAAGAAATCATTTTGTAAAATTGAGATTGTAGCTTTTAAGGACCTTGCCTACTGTATACAATTTTAGAGACTAAATTGATGCGTTGCTTTGTTTGTTGGACACGGACATGGCGACACGCCTAATTCCAGAGGTGTCCGTGCTTCAAAGGTTCGAAACATTCTTAATTTGCTTGAAAATGTTGTGGCAGGACCAAGATGGGCAAAATACTATATAGGCCCTCTTCAATTTATCATATGCTTTGGGACAGTAATTGGTGGTCCTCTTGTGGGAGGAAAGAGTCTCAAGGTAATAACATAAAAGGTTCATTTCATTTTCTCTTTATAGTTTATAACTTTGTCCACATTCTTATACTATAGTTTCACTAAGGTGCTACATTTTTCTTCTTCTATTGCAGTTCATTTACCAACTTTACCATCCAGAAGGATCAATGAAGCTTTACCAATTTATCATTATATGTGGAGTTGTAACTATGCTTTTGGCTCAGCTTCCATCCTTTCACTCCTTGAGATACATTAATCTGATTTCTCTGATTCTCTGTGTGACTTATGCAACATTTCTCACTATCGGCTCGATATACGTCGGTAAGGAGATAAAAACACAATGGCATTGGCAATGTATGACAGAAATTTGTACTGTGATTCATTCAATTGACTGTGTTGATTGCATGGTCCAATGCAGGTCACTCGAAAGATGCGCCGCCAAGAGAGTATTCTGTAAAAGGTTCTCATGAAGATAAACTGTTTGGTGTCTTCAATGGTATTTCAATCATTGCTACCACATATGCTAGTGGGATTATTCCAGAAATCCAGGTTAGTTTTGCATTTTGTTAGTCTTTTTTTAGAGAACAAATGTTGTAAATGGAATCAAATATGTTTTGTTTCACTTTATGAAGAGACAAAATTGATTCTATAGATGTAGAATTGATTTTGACATTTTTGGATGTTCTCGAGTAGAACTGATTTTGCCTTCAAAATTGTTTCTAAAGTGAAGCTAGCATTCAAAGTTTTTGCCTCTACAATCGATTTTTAACTTCAAATTTATTGTTCAATCCATTTTTCAGTGAATGTATCCAAATCAAAATCACTTTACATTGGACTCACTTTTGTGTGTACTTGGTTCTGCGGTGAAAAATGATTATTTTGAATGAATCGATTCTAACTAAAAGTGAGTTAAATGTTATGCCATTAACGTTTTGATACATTCATGTAAATGTAAAGGCTAAAAATCAATTCTATAGACAAAAACTCCAAATTCTAACTTTAAGTTAGAATAAATTTTGAACACAAAATCAATTCTACCCGAAATTATTGGAAGATGTCATAATCAATTCTACACCTCTAGAATGAATTTCGTCTCCTACAAAAGTGGAACCAAACACAAATATTTAGTTGTGACAGAATAAGAATCAATTGATATCCTTTTGAGTTTAGAATAACCAAATGCACATGTCAAGTGACTAACTAAATACAATTCTTGTGCAATTTTGTAGGCAACTTTGGCACCTCCTGTGAAGGGAAAAATGTTCAAAGGACTATGTGTGTGTTATTCTGTTATAGTAGCTACATATTTCAGTGTTGCTATCTCTGGTTATTGGGCATTTGGAAATGCATCTGGTGCAACAATTCTTGCTAACTACATTGGGACGACAAAACTATTGCTTCCCAAATGGTTTTTCTTGACCACTAATATACTCATCCTTCTTCAAGTCTTCGGATTGACTGCGGTAAGAACACCTAAACTGTTATGCATATACATTTGTCAATTTTGCGATTCAAATTCGGGTGCGGGTTTGAAAGAACTTATTTATAGCTTAGTTGGACTTATCTTATAACATAAATGTACATGTTACTGTTTGGAAGAGTTTATTGAAAGAGTTTATGTTATATATGTTGGTAAACTGCCTTAAGCTTATTTCAATAAAGCTTCGATGGATAGCTTATGAAACAAGATTCCTCTTTGATAATAGACATAGGTCATGTTTGTATAAATAACTTCATCAAGCGCTTATAGCATAAGACCTTATTATATAGTAATGCTTATGCATAAGCTATGTTTTTGACAAAAGATAAAATAAAGTCAAACTATTTTCATATAAGCTACTTTCACACGCTTCACTTTCCTGATGAATGATTATAACTTGATTATATTGCAGGTATATCTTCAACCAACAAATGAATTATTTGAATCAATTTTCGGAGATCCAAAGAAAGGACAGTTTTCAATGCGCAATGTTGTTCCAAGGGTGCTCTCTAGGTCAATATCAGTAGCAGCAGCCACACTTTTTGCAGCAATGTTGCCATTCTTTCCAGATATAATGGCATTGTTTGGAGCATTTGCATTCATTCCTCTAGATTTCATTTTGCCAATGGTTTTTTACAATATAACTTTCAAGCCTTCCAAACAAGGCATAATCTATTGGGTGAATACATTGATTGGAGGAGGGTCCTCAATTTTAGTTGTGATAGGGGGAATAGCATCAATTAGACAAATAGTTCTTGATGCTAAAACGTATAGTTTATTTTCTGATTCCTGA
Protein sequence

>MS.gene60548.t1

MGTAAQSSSEIYTSDSEKGFAINHESSTSPELDAGAKFVLVSKGSWLHCGYHLTTSIVGPVILTLPFSFTLLGWFGGVIWLVLAGVITFYSYNLLSIVLEHHAQLGRRQFRFRDMARDILGPRWAKYYIGPLQFIICFGTVIGGPLVGGKSLKFIYQLYHPEGSMKLYQFIIICGVVTMLLAQLPSFHSLRYINLISLILCVTYATFLTIGSIYVGHSKDAPPREYSVKGSHEDKLFGVFNGISIIATTYASGIIPEIQATLAPPVKGKMFKGLCVCYSVIVATYFSVAISGYWAFGNASGATILANYIGTTKLLLPKWFFLTTNILILLQVFGLTAVYLQPTNELFESIFGDPKKGQFSMRNVVPRVLSRSISVAAATLFAAMLPFFPDIMALFGAFAFIPLDFILPMVFYNITFKPSKQGIIYWVNTLIGGGSSILVVIGGIASIRQIVLDAKTYSLFSDS