AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60934

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60934.t1 MTR_2g063460 96.741 583 9 1 1 583 12 584 0.0 1162
MS.gene60934.t1 MTR_2g063460 96.741 583 9 1 1 583 10 582 0.0 1162
MS.gene60934.t1 MTR_4g123630 42.270 511 246 15 59 536 11 505 1.49e-104 329
MS.gene60934.t1 MTR_2g032660 42.308 520 226 18 59 533 46 536 3.87e-104 329
MS.gene60934.t1 MTR_4g005110 64.783 230 75 2 307 534 337 562 3.59e-96 307
MS.gene60934.t1 MTR_8g088390 50.836 299 115 8 265 537 234 526 6.73e-86 279
MS.gene60934.t1 MTR_8g088390 50.836 299 115 8 265 537 299 591 1.78e-85 280
MS.gene60934.t1 MTR_2g005840 63.388 183 67 0 349 531 237 419 8.27e-84 270
MS.gene60934.t1 MTR_2g005840 63.388 183 67 0 349 531 268 450 3.16e-83 269
MS.gene60934.t1 MTR_7g085500 58.294 211 78 2 346 556 415 615 1.19e-80 266
MS.gene60934.t1 MTR_6g032970 52.033 246 88 4 311 536 336 571 4.47e-78 259
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60934.t1 AT1G79270 45.287 488 205 11 80 557 63 498 1.83e-124 376
MS.gene60934.t1 AT1G79270 45.287 488 205 11 80 557 63 498 1.83e-124 376
MS.gene60934.t1 AT1G79270 45.287 488 205 11 80 557 63 498 1.83e-124 376
MS.gene60934.t1 AT1G79270 45.287 488 205 11 80 557 78 513 4.56e-124 376
MS.gene60934.t1 AT1G48110 39.608 510 245 13 60 535 13 493 1.83e-99 315
MS.gene60934.t1 AT1G48110 39.608 510 245 13 60 535 13 493 1.83e-99 315
MS.gene60934.t1 AT3G13060 54.007 287 107 7 295 562 294 574 8.06e-93 297
MS.gene60934.t1 AT3G13060 54.007 287 107 7 295 562 294 574 8.06e-93 297
MS.gene60934.t1 AT3G13060 54.007 287 107 7 295 562 306 586 1.20e-92 297
MS.gene60934.t1 AT3G13060 54.007 287 107 7 295 562 316 596 1.36e-92 297
MS.gene60934.t1 AT3G17330 58.407 226 91 1 314 536 116 341 4.42e-91 289
MS.gene60934.t1 AT3G13460 51.546 291 114 6 276 546 335 618 2.10e-90 293
MS.gene60934.t1 AT3G13460 51.546 291 114 6 276 546 337 620 2.25e-90 293
MS.gene60934.t1 AT3G13460 51.546 291 114 6 276 546 338 621 2.25e-90 293
MS.gene60934.t1 AT3G17330 41.031 446 212 13 105 536 35 443 3.80e-90 290
MS.gene60934.t1 AT3G17330 41.031 446 212 13 105 536 35 443 3.80e-90 290
MS.gene60934.t1 AT1G09810 52.878 278 123 5 262 535 88 361 3.18e-87 277
MS.gene60934.t1 AT1G09810 58.261 230 95 1 306 535 175 403 3.65e-87 278
MS.gene60934.t1 AT1G09810 58.261 230 95 1 306 535 156 384 4.30e-87 278
MS.gene60934.t1 AT1G55500 53.307 257 97 4 292 529 268 520 3.65e-85 276
MS.gene60934.t1 AT1G55500 53.307 257 97 4 292 529 281 533 3.70e-85 276
MS.gene60934.t1 AT1G55500 53.307 257 97 4 292 529 324 576 3.90e-85 277
MS.gene60934.t1 AT1G55500 53.307 257 97 4 292 529 311 563 4.80e-85 276
MS.gene60934.t1 AT5G61020 55.696 237 85 4 311 534 199 428 4.84e-85 274
MS.gene60934.t1 AT1G55500 53.307 257 97 4 292 529 324 576 4.96e-85 276
MS.gene60934.t1 AT5G61020 55.696 237 85 4 311 534 197 426 4.99e-85 273
MS.gene60934.t1 AT1G55500 53.307 257 97 4 292 529 324 576 7.08e-85 276
MS.gene60934.t1 AT3G03950 55.804 224 95 1 311 534 189 408 3.83e-82 264
MS.gene60934.t1 AT3G03950 55.804 224 95 1 311 534 190 409 4.52e-82 264
MS.gene60934.t1 AT3G03950 55.804 224 95 1 311 534 193 412 5.65e-82 263
MS.gene60934.t1 AT1G27960 56.250 224 83 3 311 534 215 423 7.06e-80 259
MS.gene60934.t1 AT1G27960 56.250 224 83 3 311 534 289 497 6.11e-79 259
MS.gene60934.t1 AT5G58190 52.245 245 107 5 317 556 275 514 2.61e-78 257
MS.gene60934.t1 AT5G58190 52.245 245 107 5 317 556 274 513 3.27e-78 256
MS.gene60934.t1 AT3G13060 56.075 214 72 4 295 492 316 523 1.32e-71 240
MS.gene60934.t1 AT3G13460 46.203 158 50 6 292 421 346 496 1.41e-29 122
MS.gene60934.t1 AT3G13060 43.357 143 59 4 295 421 316 452 3.31e-25 109
MS.gene60934.t1 AT1G27960 48.214 112 43 3 311 422 289 385 1.91e-20 94.7
MS.gene60934.t1 AT4G11970 30.357 168 82 5 344 492 44 195 3.58e-13 72.0
MS.gene60934.t1 AT4G11970 30.357 168 82 5 344 492 44 195 3.82e-13 71.6
MS.gene60934.t1 AT4G11970 30.357 168 82 5 344 492 44 195 4.48e-13 71.6
MS.gene60934.t1 AT4G11970 30.460 174 84 6 344 498 44 199 1.05e-12 70.9
MS.gene60934.t1 AT4G11970 30.460 174 84 6 344 498 44 199 1.05e-12 70.9

Find 135 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTGTTGCTTTCATATT+AGG 0.139929 2.4:+30600014 None:intergenic
TATTCTGCTGGTAGTTATTA+TGG 0.145347 2.4:-30601805 MS.gene60934:CDS
TCAACAAAAGTATGGATTTC+TGG 0.157531 2.4:-30599431 MS.gene60934:CDS
GAAAAGTGCATGATCATATT+TGG 0.231336 2.4:+30599800 None:intergenic
TTAAACTCTGGAGGTAATTC+TGG 0.231621 2.4:-30599888 MS.gene60934:CDS
GTTACCTTGTTTGCTTGTTT+TGG 0.232110 2.4:+30600408 None:intergenic
GAGGCTCGACAATGCATTTC+AGG 0.241866 2.4:-30599694 MS.gene60934:CDS
ATATTGATCTGTCCTGATTT+TGG 0.248014 2.4:+30599842 None:intergenic
CCTGGCTATATTTCACCTTA+TGG 0.275162 2.4:-30600675 MS.gene60934:CDS
GTGTCTCTACTATTTGTTAC+AGG 0.280235 2.4:+30599303 None:intergenic
TGTATCAAGAACATCGATAT+TGG 0.319476 2.4:-30599116 MS.gene60934:CDS
AGTGGATTTCAACAAAAGTA+TGG 0.322061 2.4:-30599439 MS.gene60934:CDS
TCATATTTGGTTGGAAAATC+AGG 0.322709 2.4:+30599813 None:intergenic
CGATCTACCACTCGGTTTAC+TGG 0.323936 2.4:+30600569 None:intergenic
ATTTCTGGCAGCAAGATAAA+TGG 0.351407 2.4:-30599416 MS.gene60934:CDS
ATATGCCGTAGCTGAGGATT+TGG 0.367053 2.4:+30599351 None:intergenic
AGGGAATCGTTATAATGAAT+TGG 0.374688 2.4:-30600592 MS.gene60934:CDS
CAGTATCAGGTTTACCCTCC+TGG 0.392158 2.4:-30600726 MS.gene60934:CDS
TTTATAATGTGCCATTTGAC+AGG 0.415396 2.4:+30599381 None:intergenic
TCCGTCTTTCAACAACCAAT+TGG 0.421822 2.4:-30600702 MS.gene60934:CDS
CTCTTGCATGACCTTCTGAC+GGG 0.425352 2.4:+30599072 None:intergenic
ATGTTCTTTACAACCAACTT+AGG 0.426914 2.4:+30598309 None:intergenic
TGGTGTCGATGTCCAGTATC+AGG 0.429764 2.4:-30600739 MS.gene60934:CDS
TAGGTCATGCAAGCAGATAA+TGG 0.430474 2.4:-30600828 MS.gene60934:CDS
TCGAGCCTCTTATTGCCATT+AGG 0.430781 2.4:+30599708 None:intergenic
GCGACGGGAAAAGAACCCTT+TGG 0.439928 2.4:+30600092 None:intergenic
AGATCATGTGTATCATCAAT+AGG 0.445206 2.4:-30601898 MS.gene60934:CDS
TTCACTTTCTCAACCAACTT+AGG 0.446586 2.4:+30598279 None:intergenic
ATGGAGAACAGGACCAGAAA+TGG 0.448479 2.4:+30600127 None:intergenic
AGAGCATCAAGTACGATGTA+TGG 0.449332 2.4:-30599740 MS.gene60934:CDS
CAGGAGGGTAAACCTGATAC+TGG 0.449509 2.4:+30600727 None:intergenic
TGTGGAGTAGCCGAGATGAT+TGG 0.450864 2.4:-30599465 MS.gene60934:CDS
TATTATGGATATTACTATCC+AGG 0.456293 2.4:-30601790 MS.gene60934:intron
GTTGAAGAAACATCTAATAT+TGG 0.457075 2.4:+30600450 None:intergenic
CAGAATGTTGCTTATTCTGC+TGG 0.462148 2.4:-30601817 MS.gene60934:CDS
TCATCAATAGGAGATACTTC+TGG 0.463455 2.4:-30601886 MS.gene60934:CDS
TATATTAAGGTTTCTTCAAA+GGG 0.466093 2.4:-30601946 MS.gene60934:intron
TTATGTCGGCGCTGATGCTA+TGG 0.468389 2.4:-30601456 MS.gene60934:CDS
TCAACGGTGACACCAAAATC+AGG 0.469133 2.4:-30599854 MS.gene60934:CDS
TCTCTTGCATGACCTTCTGA+CGG 0.475313 2.4:+30599071 None:intergenic
CAACAACCAATTGGATCCCC+TGG 0.475726 2.4:-30600693 MS.gene60934:CDS
ATTGCATCTGAATGGAGAAC+AGG 0.476903 2.4:+30600116 None:intergenic
CAACATTCTGATCAGTGGAT+TGG 0.479321 2.4:+30601830 None:intergenic
TACCGAAAAGAAAAGGAATA+CGG 0.480275 2.4:+30599632 None:intergenic
CCATAAGGTGAAATATAGCC+AGG 0.480961 2.4:+30600675 None:intergenic
GAGTAGCCAGTCTGATATCC+TGG 0.482425 2.4:+30600786 None:intergenic
CCTAGAACAGTTAATGCAAA+AGG 0.482609 2.4:-30599915 MS.gene60934:CDS
GAATCCCATGAGTATGTTGA+TGG 0.482741 2.4:+30600642 None:intergenic
TTATATTAAGGTTTCTTCAA+AGG 0.484480 2.4:-30601947 MS.gene60934:intron
GGTTGTTGAAAGACGGAACC+AGG 0.487017 2.4:+30600708 None:intergenic
CCTTTGGCATTGCATCTGAA+TGG 0.488787 2.4:+30600108 None:intergenic
TATGGAGAGCAAGAAAATCA+AGG 0.500681 2.4:-30601482 MS.gene60934:CDS
ACGGATATTTCCCTGTCAAA+TGG 0.501338 2.4:-30599392 MS.gene60934:CDS
TACTTTCCTGTGAACACACC+TGG 0.502118 2.4:-30600759 MS.gene60934:CDS
GATAGCATACCGAAAAGAAA+AGG 0.504322 2.4:+30599625 None:intergenic
TATGTAGAAAACTTTGCGAC+GGG 0.505982 2.4:+30600077 None:intergenic
GCAAAAGGTACTTTAAACTC+TGG 0.507406 2.4:-30599900 MS.gene60934:CDS
TCAGGATGCACAGAATCAAA+TGG 0.513178 2.4:-30599676 MS.gene60934:CDS
GTATGGGCAAGTACACCTAA+TGG 0.514115 2.4:-30599723 MS.gene60934:CDS
TACTTCCATCAACATACTCA+TGG 0.517546 2.4:-30600647 MS.gene60934:CDS
CACATGCAAGCTTACCATGT+TGG 0.518787 2.4:+30602120 None:intergenic
GTACACCTAATGGCAATAAG+AGG 0.519179 2.4:-30599713 MS.gene60934:CDS
TCGCAGAGTCGTACTGGCAG+TGG 0.526655 2.4:-30600537 MS.gene60934:CDS
TGTACATTGGTATGCGGCAT+AGG 0.526780 2.4:+30599034 None:intergenic
AGTGCATGATCATATTTGGT+TGG 0.527014 2.4:+30599804 None:intergenic
ATATAGCCAGGGGATCCAAT+TGG 0.527493 2.4:+30600687 None:intergenic
CCCTTGTGCTACATCTTGTG+TGG 0.528879 2.4:+30600611 None:intergenic
TCTTATGTCTATCTCATGCC+AGG 0.534138 2.4:-30600804 MS.gene60934:CDS
GATGGAAGTAACTCACCATA+AGG 0.536031 2.4:+30600660 None:intergenic
TCCAATTGGTTGTTGAAAGA+CGG 0.536670 2.4:+30600701 None:intergenic
TCACTTAATGAGCAGAATCA+AGG 0.540048 2.4:-30599939 MS.gene60934:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.4:-30598292 MS.gene60934:CDS
GAACATGGAGGATCCTAAGT+TGG 0.540134 2.4:-30598322 MS.gene60934:CDS
CAGAATCAAATGGAAGAGAA+AGG 0.540329 2.4:-30599666 MS.gene60934:CDS
AAGGTTTCTTCAAAGGGTGG+TGG 0.540738 2.4:-30601940 MS.gene60934:CDS
TCGACACCAGGTGTGTTCAC+AGG 0.547002 2.4:+30600753 None:intergenic
CCAGCCAAAACAAGCAAACA+AGG 0.547719 2.4:-30600412 MS.gene60934:intron
CCATTCAGATGCAATGCCAA+AGG 0.548568 2.4:-30600108 MS.gene60934:CDS
GAGCATCAAGTACGATGTAT+GGG 0.550725 2.4:-30599739 MS.gene60934:CDS
CATTCAGATGCAATGCCAAA+GGG 0.552432 2.4:-30600107 MS.gene60934:CDS
GAGCAACTCATCAGAAGTGA+AGG 0.569571 2.4:-30600481 MS.gene60934:CDS
CATATCAGCTGTAAAGAACA+TGG 0.571245 2.4:-30598337 MS.gene60934:CDS
CTCAGTACTAACCCATCCCT+TGG 0.572036 2.4:+30599992 None:intergenic
TTATAATGTGCCATTTGACA+GGG 0.573430 2.4:+30599382 None:intergenic
GAAGACTTAACAAGTGCACT+TGG 0.574492 2.4:-30598369 MS.gene60934:CDS
AGCAACAAGTACCAAGGGAT+GGG 0.576647 2.4:-30600003 MS.gene60934:CDS
CTCATGCCAGGATATCAGAC+TGG 0.577228 2.4:-30600792 MS.gene60934:CDS
ACCGAAAAGAAAAGGAATAC+GGG 0.578211 2.4:+30599633 None:intergenic
GTATGTAGAAAACTTTGCGA+CGG 0.581650 2.4:+30600076 None:intergenic
ACATACAATCAAGGAAAGAG+TGG 0.582689 2.4:-30600059 MS.gene60934:CDS
GCTTGTGATCATTATTCTCG+AGG 0.582868 2.4:+30599325 None:intergenic
ATGAAAGCAACAAGTACCAA+GGG 0.583635 2.4:-30600008 MS.gene60934:CDS
AGCCGAGATGATTGGACGAG+TGG 0.583728 2.4:-30599457 MS.gene60934:CDS
ACTTCCATCAACATACTCAT+GGG 0.589217 2.4:-30600646 MS.gene60934:CDS
ATTAAGGTTTCTTCAAAGGG+TGG 0.589556 2.4:-30601943 MS.gene60934:intron
ATCCACTCGTCCAATCATCT+CGG 0.591466 2.4:+30599455 None:intergenic
AAGCAACAAGTACCAAGGGA+TGG 0.592367 2.4:-30600004 MS.gene60934:CDS
TGAGTTCAGGTCAACGCTAG+TGG 0.593166 2.4:-30599495 MS.gene60934:intron
GAAGAAACATCTAATATTGG+TGG 0.594302 2.4:+30600453 None:intergenic
ATAAGCAACATTCTGATCAG+TGG 0.595793 2.4:+30601825 None:intergenic
ATATTCCAAATCCTCAGCTA+CGG 0.598835 2.4:-30599356 MS.gene60934:CDS
GTAAAATCAAACCTGTACAT+TGG 0.599665 2.4:+30599021 None:intergenic
GAAAATCAAGGATATTATGT+CGG 0.602073 2.4:-30601470 MS.gene60934:CDS
TCTGGAGATAAGAGTGTCAA+CGG 0.609069 2.4:-30599870 MS.gene60934:CDS
TTGAGCATTTCAATACCTTG+CGG 0.609987 2.4:+30599154 None:intergenic
AGAATGATTACAGGTTATGG+TGG 0.612198 2.4:-30601509 MS.gene60934:intron
AAAGGTACTTTAAACTCTGG+AGG 0.617094 2.4:-30599897 MS.gene60934:CDS
TGAGTTGCTCACATTAGATG+AGG 0.617233 2.4:+30600494 None:intergenic
TGATACTGGACATCGACACC+AGG 0.618053 2.4:+30600741 None:intergenic
ATTTGGTTGGAAAATCAGGA+AGG 0.619406 2.4:+30599817 None:intergenic
CATAAGGTGAAATATAGCCA+GGG 0.620198 2.4:+30600676 None:intergenic
TATGCCGCATACCAATGTAC+AGG 0.622506 2.4:-30599032 MS.gene60934:intron
ACACATGATCTTGCATCAGA+TGG 0.625382 2.4:+30601910 None:intergenic
TAAGTTGGTTGTAAAGAACA+TGG 0.629871 2.4:-30598307 MS.gene60934:CDS
TATGAAAGCAACAAGTACCA+AGG 0.634095 2.4:-30600009 MS.gene60934:CDS
CATACAATCAAGGAAAGAGT+GGG 0.635967 2.4:-30600058 MS.gene60934:CDS
AGGATAATATGCCGTAGCTG+AGG 0.638343 2.4:+30599345 None:intergenic
ATGAATAAGAAGAAGCTGCA+TGG 0.646230 2.4:-30602172 MS.gene60934:CDS
GAGTTGCTCACATTAGATGA+GGG 0.650819 2.4:+30600495 None:intergenic
TGGCAGCAAGATAAATGGAA+CGG 0.653548 2.4:-30599411 MS.gene60934:CDS
AGCAACTCATCAGAAGTGAA+GGG 0.655536 2.4:-30600480 MS.gene60934:CDS
AAATAGTAGAGACACTCAAG+AGG 0.657180 2.4:-30599295 MS.gene60934:intron
GAAGCTGAAACTCAGAAACA+AGG 0.666505 2.4:-30599970 MS.gene60934:CDS
ACCACACAAGATGTAGCACA+AGG 0.668664 2.4:-30600612 MS.gene60934:CDS
GTTGAAAGACGGAACCAGGA+GGG 0.679018 2.4:+30600712 None:intergenic
CAAACCTGTACATTGGTATG+CGG 0.683810 2.4:+30599028 None:intergenic
GAAAAGATCGATCTACCACT+CGG 0.689012 2.4:+30600561 None:intergenic
ATAAGGTGAAATATAGCCAG+GGG 0.699657 2.4:+30600677 None:intergenic
GTTGAGAAAGTGAATGACTG+AGG 0.708180 2.4:-30598270 None:intergenic
TGAACATAATAATTCCAACA+TGG 0.712248 2.4:-30602134 MS.gene60934:intron
TGTTGAAAGACGGAACCAGG+AGG 0.716372 2.4:+30600711 None:intergenic
GTTGGTTGTAAAGAACATGG+AGG 0.739574 2.4:-30598304 MS.gene60934:CDS
CCACACAAGATGTAGCACAA+GGG 0.750655 2.4:-30600611 MS.gene60934:CDS
ATCAGCTGTAAAGAACATGG+AGG 0.773499 2.4:-30598334 MS.gene60934:CDS
GAATTGGCCAGTAAACCGAG+TGG 0.774424 2.4:-30600576 MS.gene60934:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTGTATGTTATATTA+AGG - chr2.4:30598485-30598504 MS.gene60934:intron 10.0%
!!! ATTTAGAATAATCTAATTTA+AGG + chr2.4:30600274-30600293 None:intergenic 10.0%
!! AAGACTTCTAAATAAATTAT+TGG + chr2.4:30601788-30601807 None:intergenic 15.0%
!! ATAGTAGAAAAATAAAGAAT+TGG + chr2.4:30601743-30601762 None:intergenic 15.0%
!! ATATAAATGAAAAGTAAAGA+AGG + chr2.4:30601845-30601864 None:intergenic 15.0%
!! CATTTATTAAATATTGTGAA+AGG + chr2.4:30601599-30601618 None:intergenic 15.0%
!! GAAAATAACATGTTAATAAA+AGG - chr2.4:30599377-30599396 MS.gene60934:CDS 15.0%
!! TAAAAACTAAAGAAATGAAA+TGG + chr2.4:30602012-30602031 None:intergenic 15.0%
!! TAAAGTAATTAATAACTCTT+TGG - chr2.4:30601684-30601703 MS.gene60934:intron 15.0%
!! TAATTGTAACACAATTAAAA+AGG + chr2.4:30601818-30601837 None:intergenic 15.0%
!! TAGTAGAAAAATAAAGAATT+GGG + chr2.4:30601742-30601761 None:intergenic 15.0%
!! TATAAATGAAAAGTAAAGAA+GGG + chr2.4:30601844-30601863 None:intergenic 15.0%
!!! AATTCTTTATTTTTCTACTA+TGG - chr2.4:30601742-30601761 MS.gene60934:intron 15.0%
!!! AATTTTTGTTGGTTTTATTT+AGG - chr2.4:30599597-30599616 MS.gene60934:intron 15.0%
!!! ATGTTTTCTTATTGTATTTT+TGG - chr2.4:30598462-30598481 MS.gene60934:intron 15.0%
!!! GTAAATATCTAAATTTTTGT+TGG - chr2.4:30599586-30599605 MS.gene60934:intron 15.0%
!!! TCTTTGCTTATATATAATTT+TGG - chr2.4:30602040-30602059 MS.gene60934:intron 15.0%
!!! TTTCTCTTTCTAAAATTATA+AGG + chr2.4:30600165-30600184 None:intergenic 15.0%
!! AAACAATAGTTAAAACAGAA+CGG + chr2.4:30600072-30600091 None:intergenic 20.0%
!! AAACTATATATTGAACTGTT+GGG - chr2.4:30600191-30600210 MS.gene60934:intron 20.0%
!! AATGTCAAAAAAGAATTCAT+TGG + chr2.4:30601516-30601535 None:intergenic 20.0%
!! AGATTATTCTAAATAGTTTG+TGG - chr2.4:30600280-30600299 MS.gene60934:intron 20.0%
!! ATGAGTAGATTATGAAAATT+TGG + chr2.4:30601875-30601894 None:intergenic 20.0%
!! TAAGCATATATCTTAAGAAA+GGG - chr2.4:30599261-30599280 MS.gene60934:intron 20.0%
!! TATATTAAGGTTTCTTCAAA+GGG - chr2.4:30598498-30598517 MS.gene60934:intron 20.0%
!! TGAGTAGATTATGAAAATTT+GGG + chr2.4:30601874-30601893 None:intergenic 20.0%
!! TTAAGCATATATCTTAAGAA+AGG - chr2.4:30599260-30599279 MS.gene60934:intron 20.0%
!! TTATATTAAGGTTTCTTCAA+AGG - chr2.4:30598497-30598516 MS.gene60934:intron 20.0%
!! TTGAATTCCGAAATAAATTT+GGG - chr2.4:30599336-30599355 MS.gene60934:CDS 20.0%
!! TTTGAATTCCGAAATAAATT+TGG - chr2.4:30599335-30599354 MS.gene60934:CDS 20.0%
!!! AAGAAATGAAATGGTTTTTT+CGG + chr2.4:30602003-30602022 None:intergenic 20.0%
!!! ATACCATTTTTGGAATAATT+TGG - chr2.4:30601646-30601665 MS.gene60934:intron 20.0%
!!! TCATGATAATTGTGTTATTT+TGG - chr2.4:30599058-30599077 MS.gene60934:CDS 20.0%
!!! TTCTTTTTTGACATTATTGA+TGG - chr2.4:30601521-30601540 MS.gene60934:intron 20.0%
!!! TTTATGTTTTTCCTTTCTTA+CGG - chr2.4:30598911-30598930 MS.gene60934:intron 20.0%
! AACTATATATTGAACTGTTG+GGG - chr2.4:30600192-30600211 MS.gene60934:intron 25.0%
! AAGATACAGAAGAAATAACT+AGG + chr2.4:30601222-30601241 None:intergenic 25.0%
! ACTCCAAATTATTCCAAAAA+TGG + chr2.4:30601652-30601671 None:intergenic 25.0%
! ATGAGCAAATAAAACACAAA+CGG + chr2.4:30600878-30600897 None:intergenic 25.0%
! GAAAATCAAGGATATTATGT+CGG - chr2.4:30598974-30598993 MS.gene60934:intron 25.0%
! GAAACTATATATTGAACTGT+TGG - chr2.4:30600190-30600209 MS.gene60934:intron 25.0%
! GTTGAAGAAACATCTAATAT+TGG + chr2.4:30599997-30600016 None:intergenic 25.0%
! TAACATTCAAGGAAAAAATG+TGG - chr2.4:30599479-30599498 MS.gene60934:CDS 25.0%
! TATTATGGATATTACTATCC+AGG - chr2.4:30598654-30598673 MS.gene60934:intron 25.0%
! TATTGCATTACACATGAAAA+TGG - chr2.4:30599409-30599428 MS.gene60934:CDS 25.0%
! TCAGATTCAAGTATTTATAC+AGG + chr2.4:30599146-30599165 None:intergenic 25.0%
! TGAACATAATAATTCCAACA+TGG - chr2.4:30598310-30598329 MS.gene60934:CDS 25.0%
! TGTAACACAATTAAAAAGGT+GGG + chr2.4:30601814-30601833 None:intergenic 25.0%
! TTAGTAAGAAGTAAGAACTT+TGG + chr2.4:30601469-30601488 None:intergenic 25.0%
! TTGTAACACAATTAAAAAGG+TGG + chr2.4:30601815-30601834 None:intergenic 25.0%
!! AAGTTTTCTACATACAATCA+AGG - chr2.4:30600376-30600395 MS.gene60934:intron 25.0%
!! TCTAAACTTGATACCATTTT+TGG - chr2.4:30601636-30601655 MS.gene60934:intron 25.0%
!! TTTAGAATAGTTTGTCAACT+AGG + chr2.4:30601622-30601641 None:intergenic 25.0%
!!! ACTTATTTTTACTCGAAACT+CGG - chr2.4:30601930-30601949 MS.gene60934:CDS 25.0%
!!! ATTAGGAAAGTTGTTTTGAT+AGG + chr2.4:30600416-30600435 None:intergenic 25.0%
!!! ATTTTTTCCTTGAATGTTAC+AGG + chr2.4:30599478-30599497 None:intergenic 25.0%
!!! TTAGGAAAGTTGTTTTGATA+GGG + chr2.4:30600415-30600434 None:intergenic 25.0%
!!! TTTTGATAATTGTTGAGTTC+AGG - chr2.4:30600936-30600955 MS.gene60934:intron 25.0%
!!! TTTTGGAATAATTTGGAGTT+GGG - chr2.4:30601653-30601672 MS.gene60934:intron 25.0%
!!! TTTTTGGAATAATTTGGAGT+TGG - chr2.4:30601652-30601671 MS.gene60934:intron 25.0%
AGATCATGTGTATCATCAAT+AGG - chr2.4:30598546-30598565 MS.gene60934:intron 30.0%
AGCCAATCCCAAATTTATTT+CGG + chr2.4:30599346-30599365 None:intergenic 30.0%
AGGGAATCGTTATAATGAAT+TGG - chr2.4:30599852-30599871 MS.gene60934:CDS 30.0%
ATGTTCTTTACAACCAACTT+AGG + chr2.4:30602138-30602157 None:intergenic 30.0%
ATTATCAAAACACTGATGTG+AGG + chr2.4:30600926-30600945 None:intergenic 30.0%
CAACCACAATTATGCAAAAA+TGG + chr2.4:30601569-30601588 None:intergenic 30.0%
GAAGAAACATCTAATATTGG+TGG + chr2.4:30599994-30600013 None:intergenic 30.0%
GTAAAATCAAACCTGTACAT+TGG + chr2.4:30601426-30601445 None:intergenic 30.0%
TAATCATTCTACCGTAAGAA+AGG + chr2.4:30598925-30598944 None:intergenic 30.0%
TACCGAAAAGAAAAGGAATA+CGG + chr2.4:30600815-30600834 None:intergenic 30.0%
TATTCTGCTGGTAGTTATTA+TGG - chr2.4:30598639-30598658 MS.gene60934:intron 30.0%
TCATATTTGGTTGGAAAATC+AGG + chr2.4:30600634-30600653 None:intergenic 30.0%
TGAGCAAATAAAACACAAAC+GGG + chr2.4:30600877-30600896 None:intergenic 30.0%
TGTATCAAGAACATCGATAT+TGG - chr2.4:30601328-30601347 MS.gene60934:intron 30.0%
TTTGTTAAGATTCTGCTACA+CGG - chr2.4:30598831-30598850 MS.gene60934:intron 30.0%
! AGTGGATTTCAACAAAAGTA+TGG - chr2.4:30601005-30601024 MS.gene60934:intron 30.0%
! ATATTGATCTGTCCTGATTT+TGG + chr2.4:30600605-30600624 None:intergenic 30.0%
! CATTTTTGCATAATTGTGGT+TGG - chr2.4:30601567-30601586 MS.gene60934:intron 30.0%
! GAAAAGTGCATGATCATATT+TGG + chr2.4:30600647-30600666 None:intergenic 30.0%
! TCAACAAAAGTATGGATTTC+TGG - chr2.4:30601013-30601032 MS.gene60934:intron 30.0%
! TTCCGAAATAAATTTGGGAT+TGG - chr2.4:30599341-30599360 MS.gene60934:CDS 30.0%
!! AATAGTTTGTGGTGTTTTTC+AGG - chr2.4:30600291-30600310 MS.gene60934:intron 30.0%
!! AGAACTTTGGAATAAGAACA+AGG + chr2.4:30601456-30601475 None:intergenic 30.0%
!! GTACTTGTTGCTTTCATATT+AGG + chr2.4:30600433-30600452 None:intergenic 30.0%
!! TAAGTTGGTTGTAAAGAACA+TGG - chr2.4:30602137-30602156 MS.gene60934:CDS 30.0%
!! TTATAATGTGCCATTTGACA+GGG + chr2.4:30601065-30601084 None:intergenic 30.0%
!! TTTATAATGTGCCATTTGAC+AGG + chr2.4:30601066-30601085 None:intergenic 30.0%
!!! AATGAAATGGTTTTTTCGGT+CGG + chr2.4:30601999-30602018 None:intergenic 30.0%
!!! AATTTGGGATTGGCTAATTT+TGG - chr2.4:30599351-30599370 MS.gene60934:CDS 30.0%
!!! ACTTCTGGTAGTTTTAAAGA+AGG - chr2.4:30598573-30598592 MS.gene60934:intron 30.0%
!!! TAGGAAAGTTGTTTTGATAG+GGG + chr2.4:30600414-30600433 None:intergenic 30.0%
AAATAGTAGAGACACTCAAG+AGG - chr2.4:30601149-30601168 MS.gene60934:intron 35.0%
AATTGACAACACTGACGAAT+AGG + chr2.4:30598701-30598720 None:intergenic 35.0%
AATTGACCAGAAATGCAACA+AGG + chr2.4:30599105-30599124 None:intergenic 35.0%
ACATACAATCAAGGAAAGAG+TGG - chr2.4:30600385-30600404 MS.gene60934:intron 35.0%
ACCGAAAAGAAAAGGAATAC+GGG + chr2.4:30600814-30600833 None:intergenic 35.0%
ACTTCCATCAACATACTCAT+GGG - chr2.4:30599798-30599817 MS.gene60934:CDS 35.0%
AGAATGATTACAGGTTATGG+TGG - chr2.4:30598935-30598954 MS.gene60934:intron 35.0%
AGTGCATGATCATATTTGGT+TGG + chr2.4:30600643-30600662 None:intergenic 35.0%
ATAAGCAACATTCTGATCAG+TGG + chr2.4:30598622-30598641 None:intergenic 35.0%
ATAAGGTGAAATATAGCCAG+GGG + chr2.4:30599770-30599789 None:intergenic 35.0%
ATATTCCAAATCCTCAGCTA+CGG - chr2.4:30601088-30601107 MS.gene60934:intron 35.0%
ATGAAAGCAACAAGTACCAA+GGG - chr2.4:30600436-30600455 MS.gene60934:CDS 35.0%
ATGAATAAGAAGAAGCTGCA+TGG - chr2.4:30598272-30598291 MS.gene60934:CDS 35.0%
ATTAAGGTTTCTTCAAAGGG+TGG - chr2.4:30598501-30598520 MS.gene60934:intron 35.0%
ATTGACAACACTGACGAATA+GGG + chr2.4:30598700-30598719 None:intergenic 35.0%
ATTTGGTTGGAAAATCAGGA+AGG + chr2.4:30600630-30600649 None:intergenic 35.0%
CAATAGTTAAAACAGAACGG+AGG + chr2.4:30600069-30600088 None:intergenic 35.0%
CAGAATCAAATGGAAGAGAA+AGG - chr2.4:30600778-30600797 MS.gene60934:CDS 35.0%
CATAAGGTGAAATATAGCCA+GGG + chr2.4:30599771-30599790 None:intergenic 35.0%
CATACAATCAAGGAAAGAGT+GGG - chr2.4:30600386-30600405 MS.gene60934:intron 35.0%
CATATCAGCTGTAAAGAACA+TGG - chr2.4:30602107-30602126 MS.gene60934:intron 35.0%
CCTAGAACAGTTAATGCAAA+AGG - chr2.4:30600529-30600548 MS.gene60934:CDS 35.0%
CTCACAACAACATGAAACAA+TGG + chr2.4:30599208-30599227 None:intergenic 35.0%
CTCTGTTCTGTTAAAACCTA+CGG - chr2.4:30600851-30600870 MS.gene60934:intron 35.0%
GATAGCATACCGAAAAGAAA+AGG + chr2.4:30600822-30600841 None:intergenic 35.0%
GGTAGAATGATTACAGGTTA+TGG - chr2.4:30598932-30598951 MS.gene60934:intron 35.0%
GTATGTAGAAAACTTTGCGA+CGG + chr2.4:30600371-30600390 None:intergenic 35.0%
TACTTCCATCAACATACTCA+TGG - chr2.4:30599797-30599816 MS.gene60934:CDS 35.0%
TATGAAAGCAACAAGTACCA+AGG - chr2.4:30600435-30600454 MS.gene60934:CDS 35.0%
TATGGAGAGCAAGAAAATCA+AGG - chr2.4:30598962-30598981 MS.gene60934:intron 35.0%
TATGTAGAAAACTTTGCGAC+GGG + chr2.4:30600370-30600389 None:intergenic 35.0%
TCACTTAATGAGCAGAATCA+AGG - chr2.4:30600505-30600524 MS.gene60934:CDS 35.0%
TCATCAATAGGAGATACTTC+TGG - chr2.4:30598558-30598577 MS.gene60934:intron 35.0%
TCCAATTGGTTGTTGAAAGA+CGG + chr2.4:30599746-30599765 None:intergenic 35.0%
TCTTACGGTAGAATGATTAC+AGG - chr2.4:30598926-30598945 MS.gene60934:intron 35.0%
TTAGACAGCGACAAATAAAC+AGG + chr2.4:30600100-30600119 None:intergenic 35.0%
TTCACTTTCTCAACCAACTT+AGG + chr2.4:30602168-30602187 None:intergenic 35.0%
TTGAGCATTTCAATACCTTG+CGG + chr2.4:30601293-30601312 None:intergenic 35.0%
! AAGTTTCTTGAGCTGGTTTA+TGG - chr2.4:30599027-30599046 MS.gene60934:intron 35.0%
! CCTTTTGCATTAACTGTTCT+AGG + chr2.4:30600532-30600551 None:intergenic 35.0%
! CTGATAATTTGCGTTGCATT+AGG - chr2.4:30599162-30599181 MS.gene60934:CDS 35.0%
! GTGTCTCTACTATTTGTTAC+AGG + chr2.4:30601144-30601163 None:intergenic 35.0%
! TCCCGTATTCCTTTTCTTTT+CGG - chr2.4:30600810-30600829 MS.gene60934:CDS 35.0%
! TTAAACTCTGGAGGTAATTC+TGG - chr2.4:30600556-30600575 MS.gene60934:CDS 35.0%
! TTTTGCATAATTGTGGTTGG+AGG - chr2.4:30601570-30601589 MS.gene60934:intron 35.0%
!! AAAGGTACTTTAAACTCTGG+AGG - chr2.4:30600547-30600566 MS.gene60934:CDS 35.0%
!! ATTTCTGGCAGCAAGATAAA+TGG - chr2.4:30601028-30601047 MS.gene60934:intron 35.0%
!! CTATGGTTGATGTGTTCTTT+TGG - chr2.4:30601759-30601778 MS.gene60934:intron 35.0%
!! GCAAAAGGTACTTTAAACTC+TGG - chr2.4:30600544-30600563 MS.gene60934:CDS 35.0%
!! GGACCATTTTTGCATAATTG+TGG - chr2.4:30601563-30601582 MS.gene60934:intron 35.0%
!! GTTACCTTGTTTGCTTGTTT+TGG + chr2.4:30600039-30600058 None:intergenic 35.0%
!!! ACAGGTTATGGTGGATTTTA+TGG - chr2.4:30598944-30598963 MS.gene60934:intron 35.0%
AAAACAGAACGGAGGAAGTA+AGG + chr2.4:30600061-30600080 None:intergenic 40.0%
AACCAGCTCAAGAAACTTAC+AGG + chr2.4:30599025-30599044 None:intergenic 40.0%
ACACATGATCTTGCATCAGA+TGG + chr2.4:30598537-30598556 None:intergenic 40.0%
ACGAATAGGGAATCATGGAT+GGG + chr2.4:30598687-30598706 None:intergenic 40.0%
ACGGATATTTCCCTGTCAAA+TGG - chr2.4:30601052-30601071 MS.gene60934:intron 40.0%
AGCAACTCATCAGAAGTGAA+GGG - chr2.4:30599964-30599983 MS.gene60934:CDS 40.0%
ATCAGCTGTAAAGAACATGG+AGG - chr2.4:30602110-30602129 MS.gene60934:intron 40.0%
ATCCTGTAAGTTTCTTGAGC+TGG - chr2.4:30599020-30599039 MS.gene60934:intron 40.0%
ATTGCATCTGAATGGAGAAC+AGG + chr2.4:30600331-30600350 None:intergenic 40.0%
CAAACCTGTACATTGGTATG+CGG + chr2.4:30601419-30601438 None:intergenic 40.0%
CAACATTCTGATCAGTGGAT+TGG + chr2.4:30598617-30598636 None:intergenic 40.0%
CATTCAGATGCAATGCCAAA+GGG - chr2.4:30600337-30600356 MS.gene60934:intron 40.0%
CCATAAGGTGAAATATAGCC+AGG + chr2.4:30599772-30599791 None:intergenic 40.0%
CCTGGCTATATTTCACCTTA+TGG - chr2.4:30599769-30599788 MS.gene60934:CDS 40.0%
CTGATGTCCTGTAACATTCA+AGG - chr2.4:30599468-30599487 MS.gene60934:CDS 40.0%
GAAAAGATCGATCTACCACT+CGG + chr2.4:30599886-30599905 None:intergenic 40.0%
GAAGACTTAACAAGTGCACT+TGG - chr2.4:30602075-30602094 MS.gene60934:intron 40.0%
GAAGCTGAAACTCAGAAACA+AGG - chr2.4:30600474-30600493 MS.gene60934:CDS 40.0%
GAATCCCATGAGTATGTTGA+TGG + chr2.4:30599805-30599824 None:intergenic 40.0%
GAGCATCAAGTACGATGTAT+GGG - chr2.4:30600705-30600724 MS.gene60934:CDS 40.0%
GAGTTGCTCACATTAGATGA+GGG + chr2.4:30599952-30599971 None:intergenic 40.0%
GATGGAAGTAACTCACCATA+AGG + chr2.4:30599787-30599806 None:intergenic 40.0%
GCTTGTGATCATTATTCTCG+AGG + chr2.4:30601122-30601141 None:intergenic 40.0%
GTACACCTAATGGCAATAAG+AGG - chr2.4:30600731-30600750 MS.gene60934:CDS 40.0%
GTTGGTTGTAAAGAACATGG+AGG - chr2.4:30602140-30602159 MS.gene60934:CDS 40.0%
TACCTTGCGGAAAATGAATC+TGG + chr2.4:30601280-30601299 None:intergenic 40.0%
TAGGTCATGCAAGCAGATAA+TGG - chr2.4:30599616-30599635 MS.gene60934:intron 40.0%
TCAGGATGCACAGAATCAAA+TGG - chr2.4:30600768-30600787 MS.gene60934:CDS 40.0%
TCCGTCTTTCAACAACCAAT+TGG - chr2.4:30599742-30599761 MS.gene60934:CDS 40.0%
TCTTATGTCTATCTCATGCC+AGG - chr2.4:30599640-30599659 MS.gene60934:CDS 40.0%
TGAGTTGCTCACATTAGATG+AGG + chr2.4:30599953-30599972 None:intergenic 40.0%
TGGCAGCAAGATAAATGGAA+CGG - chr2.4:30601033-30601052 MS.gene60934:intron 40.0%
! AACGCTAGTGGTCAATTTTG+TGG - chr2.4:30600961-30600980 MS.gene60934:intron 40.0%
! AGAGCATCAAGTACGATGTA+TGG - chr2.4:30600704-30600723 MS.gene60934:CDS 40.0%
! CAGAATGTTGCTTATTCTGC+TGG - chr2.4:30598627-30598646 MS.gene60934:intron 40.0%
! TAGTTGCCTTGTTGCATTTC+TGG - chr2.4:30599096-30599115 MS.gene60934:CDS 40.0%
! TTCCAGATTCATTTTCCGCA+AGG - chr2.4:30601275-30601294 MS.gene60934:intron 40.0%
! TTTTTACGAAACCCGTCAGA+AGG - chr2.4:30601361-30601380 MS.gene60934:intron 40.0%
!! TCTGGAGATAAGAGTGTCAA+CGG - chr2.4:30600574-30600593 MS.gene60934:CDS 40.0%
!!! GTTTTTCAGGCATCCATTTC+TGG - chr2.4:30600304-30600323 MS.gene60934:intron 40.0%
!!! TTTTTTCGGTCGGACTAGTT+TGG + chr2.4:30601989-30602008 None:intergenic 40.0%
AAGCAACAAGTACCAAGGGA+TGG - chr2.4:30600440-30600459 MS.gene60934:CDS 45.0%
AAGGTTTCTTCAAAGGGTGG+TGG - chr2.4:30598504-30598523 MS.gene60934:intron 45.0%
ACCACACAAGATGTAGCACA+AGG - chr2.4:30599832-30599851 MS.gene60934:CDS 45.0%
AGCAACAAGTACCAAGGGAT+GGG - chr2.4:30600441-30600460 MS.gene60934:CDS 45.0%
AGGACATCAGAGATGATGTC+GGG + chr2.4:30599458-30599477 None:intergenic 45.0%
AGGATAATATGCCGTAGCTG+AGG + chr2.4:30601102-30601121 None:intergenic 45.0%
ATAAAACACAAACGGGCCGT+AGG + chr2.4:30600870-30600889 None:intergenic 45.0%
ATATAGCCAGGGGATCCAAT+TGG + chr2.4:30599760-30599779 None:intergenic 45.0%
ATATGCCGTAGCTGAGGATT+TGG + chr2.4:30601096-30601115 None:intergenic 45.0%
ATCCACTCGTCCAATCATCT+CGG + chr2.4:30600992-30601011 None:intergenic 45.0%
ATGGAGAACAGGACCAGAAA+TGG + chr2.4:30600320-30600339 None:intergenic 45.0%
CACATGCAAGCTTACCATGT+TGG + chr2.4:30598327-30598346 None:intergenic 45.0%
CACTGACGAATAGGGAATCA+TGG + chr2.4:30598692-30598711 None:intergenic 45.0%
CAGGACATCAGAGATGATGT+CGG + chr2.4:30599459-30599478 None:intergenic 45.0%
CCACACAAGATGTAGCACAA+GGG - chr2.4:30599833-30599852 MS.gene60934:CDS 45.0%
CCAGCCAAAACAAGCAAACA+AGG - chr2.4:30600032-30600051 MS.gene60934:CDS 45.0%
CCATTCAGATGCAATGCCAA+AGG - chr2.4:30600336-30600355 MS.gene60934:intron 45.0%
CCTTTGGCATTGCATCTGAA+TGG + chr2.4:30600339-30600358 None:intergenic 45.0%
GAACATGGAGGATCCTAAGT+TGG - chr2.4:30602122-30602141 MS.gene60934:intron 45.0%
GACGAATAGGGAATCATGGA+TGG + chr2.4:30598688-30598707 None:intergenic 45.0%
GAGCAACTCATCAGAAGTGA+AGG - chr2.4:30599963-30599982 MS.gene60934:CDS 45.0%
GGATGAGTGCATGTGATTGT+GGG - chr2.4:30601542-30601561 MS.gene60934:intron 45.0%
GTATGGGCAAGTACACCTAA+TGG - chr2.4:30600721-30600740 MS.gene60934:CDS 45.0%
GTGTTGTCAATTGCAGATCG+CGG - chr2.4:30598709-30598728 MS.gene60934:intron 45.0%
TACTTTCCTGTGAACACACC+TGG - chr2.4:30599685-30599704 MS.gene60934:CDS 45.0%
TATGCCGCATACCAATGTAC+AGG - chr2.4:30601412-30601431 MS.gene60934:intron 45.0%
TCAACGGTGACACCAAAATC+AGG - chr2.4:30600590-30600609 MS.gene60934:CDS 45.0%
TCGAGCCTCTTATTGCCATT+AGG + chr2.4:30600739-30600758 None:intergenic 45.0%
TCTCTTGCATGACCTTCTGA+CGG + chr2.4:30601376-30601395 None:intergenic 45.0%
TGAACTGTTGGGGATTTCGT+AGG - chr2.4:30600202-30600221 MS.gene60934:intron 45.0%
TGGATGAGTGCATGTGATTG+TGG - chr2.4:30601541-30601560 MS.gene60934:intron 45.0%
TGTACATTGGTATGCGGCAT+AGG + chr2.4:30601413-30601432 None:intergenic 45.0%
! TTTTCTTCGCAGAGTCGTAC+TGG - chr2.4:30599901-30599920 MS.gene60934:CDS 45.0%
!!! CCTTGTTTGCTTGTTTTGGC+TGG + chr2.4:30600035-30600054 None:intergenic 45.0%
!!! TTTATTTTTTTTATATTTTG+TGG - chr2.4:30598376-30598395 MS.gene60934:CDS 5.0%
CAACAACCAATTGGATCCCC+TGG - chr2.4:30599751-30599770 MS.gene60934:CDS 50.0%
CAGGAGGGTAAACCTGATAC+TGG + chr2.4:30599720-30599739 None:intergenic 50.0%
CAGTATCAGGTTTACCCTCC+TGG - chr2.4:30599718-30599737 MS.gene60934:CDS 50.0%
CCCTTGTGCTACATCTTGTG+TGG + chr2.4:30599836-30599855 None:intergenic 50.0%
CGATCTACCACTCGGTTTAC+TGG + chr2.4:30599878-30599897 None:intergenic 50.0%
CTCAGTACTAACCCATCCCT+TGG + chr2.4:30600455-30600474 None:intergenic 50.0%
CTCATGCCAGGATATCAGAC+TGG - chr2.4:30599652-30599671 MS.gene60934:CDS 50.0%
CTCTTGCATGACCTTCTGAC+GGG + chr2.4:30601375-30601394 None:intergenic 50.0%
GAATTGGCCAGTAAACCGAG+TGG - chr2.4:30599868-30599887 MS.gene60934:CDS 50.0%
GAGGCTCGACAATGCATTTC+AGG - chr2.4:30600750-30600769 MS.gene60934:CDS 50.0%
GAGTAGCCAGTCTGATATCC+TGG + chr2.4:30599661-30599680 None:intergenic 50.0%
GGTTGTTGAAAGACGGAACC+AGG + chr2.4:30599739-30599758 None:intergenic 50.0%
GTTGAAAGACGGAACCAGGA+GGG + chr2.4:30599735-30599754 None:intergenic 50.0%
TCATGGATGGGAAGCTAACC+TGG + chr2.4:30598675-30598694 None:intergenic 50.0%
TGAGTTCAGGTCAACGCTAG+TGG - chr2.4:30600949-30600968 MS.gene60934:intron 50.0%
TGATACTGGACATCGACACC+AGG + chr2.4:30599706-30599725 None:intergenic 50.0%
TGTGGAGTAGCCGAGATGAT+TGG - chr2.4:30600979-30600998 MS.gene60934:intron 50.0%
TGTTGAAAGACGGAACCAGG+AGG + chr2.4:30599736-30599755 None:intergenic 50.0%
!! TGGTGTCGATGTCCAGTATC+AGG - chr2.4:30599705-30599724 MS.gene60934:CDS 50.0%
!! TTATGTCGGCGCTGATGCTA+TGG - chr2.4:30598988-30599007 MS.gene60934:intron 50.0%
AGCCGAGATGATTGGACGAG+TGG - chr2.4:30600987-30601006 MS.gene60934:intron 55.0%
GCGACGGGAAAAGAACCCTT+TGG + chr2.4:30600355-30600374 None:intergenic 55.0%
TCGACACCAGGTGTGTTCAC+AGG + chr2.4:30599694-30599713 None:intergenic 55.0%
! TCGCAGAGTCGTACTGGCAG+TGG - chr2.4:30599907-30599926 MS.gene60934:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 30598272 30602194 30598272 ID=MS.gene60934
chr2.4 mRNA 30598272 30602194 30598272 ID=MS.gene60934.t1;Parent=MS.gene60934
chr2.4 exon 30602135 30602194 30602135 ID=MS.gene60934.t1.exon1;Parent=MS.gene60934.t1
chr2.4 CDS 30602135 30602194 30602135 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30601791 30601959 30601791 ID=MS.gene60934.t1.exon2;Parent=MS.gene60934.t1
chr2.4 CDS 30601791 30601959 30601791 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30601442 30601518 30601442 ID=MS.gene60934.t1.exon3;Parent=MS.gene60934.t1
chr2.4 CDS 30601442 30601518 30601442 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30600413 30600847 30600413 ID=MS.gene60934.t1.exon4;Parent=MS.gene60934.t1
chr2.4 CDS 30600413 30600847 30600413 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30599635 30600153 30599635 ID=MS.gene60934.t1.exon5;Parent=MS.gene60934.t1
chr2.4 CDS 30599635 30600153 30599635 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30599296 30599508 30599296 ID=MS.gene60934.t1.exon6;Parent=MS.gene60934.t1
chr2.4 CDS 30599296 30599508 30599296 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30599033 30599185 30599033 ID=MS.gene60934.t1.exon7;Parent=MS.gene60934.t1
chr2.4 CDS 30599033 30599185 30599033 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
chr2.4 exon 30598272 30598397 30598272 ID=MS.gene60934.t1.exon8;Parent=MS.gene60934.t1
chr2.4 CDS 30598272 30598397 30598272 ID=cds.MS.gene60934.t1;Parent=MS.gene60934.t1
Gene Sequence

>MS.gene60934

ATGAATAAGAAGAAGCTGCATGGTGATTCTTCAACAGCTGAACATAATAATTCCAACATGGTAAGCTTGCATGTGATTTCTAAATTTTTATTTTATTTTTATGCTTTATTTTTTTTATATTTTGTGGCTTAATTTTGAATTTTGAAATTAACTGTTTCATTAGTTATATGCATGAAACATGAAGAATTACATGTTTTCTTATTGTATTTTTGGATTTATTGTATGTTATATTAAGGTTTCTTCAAAGGGTGGTGGAAGTTCACCATCTGATGCAAGATCATGTGTATCATCAATAGGAGATACTTCTGGTAGTTTTAAAGAAGGCGATGTCGATCATGAATTCCAATCCACTGATCAGAATGTTGCTTATTCTGCTGGTAGTTATTATGGATATTACTATCCAGGTTAGCTTCCCATCCATGATTCCCTATTCGTCAGTGTTGTCAATTGCAGATCGCGGAAACTAGCAGTTTGTTCAAATTATGATATGCTATATCGCATCTGTTGATGCTATTTGACAACAGTTTGTTTTAAATAGAGTATTGCAGAACAATAGCGATTTGTTAAGATTCTGCTACACGGTAGCTTTTATATAGCTGCTATTTGACAACACTGCTATTCGTTTATGTTGATTGTATATTTATGTTTTTCCTTTCTTACGGTAGAATGATTACAGGTTATGGTGGATTTTATGGAGAGCAAGAAAATCAAGGATATTATGTCGGCGCTGATGCTATGGATTTTCAGTATCCTGTAAGTTTCTTGAGCTGGTTTATGGTTTTTTTGTCATGATAATTGTGTTATTTTGGTTCAGTCTTTCTATGTAGTTGCCTTGTTGCATTTCTGGTCAATTCAGTCTATGCATTTGATGCCTGTATAAATACTTGAATCTGATAATTTGCGTTGCATTAGGCAAGTCTTTAGAATCATATTCCATTGTTTCATGTTGTTGTGAGAAACATGCATGTGTCTCAAAGAATCGTATTCTTTAAGCATATATCTTAAGAAAGGGTTGAATAGAAAATAAAACTGTAATGATGATGTATAATGTTTTTTAGCACATTTTGAATTCCGAAATAAATTTGGGATTGGCTAATTTTGGCTTGAAAATAACATGTTAATAAAAGGCTTCATTCATATTGCATTACACATGAAAATGGTTAATATTTTAAACTACTATTTACCCGACATCATCTCTGATGTCCTGTAACATTCAAGGAAAAAATGTGGCTAGTAAATATGATTTCATGAAATGATAAGAATTCATTATGCAGACATATACTTGATCTCTCATATGTTCTACAACATATATATGTAAATATCTAAATTTTTGTTGGTTTTATTTAGGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATATCAGACTGGCTACTCTTCATACTTTCCTGTGAACACACCTGGTGTCGATGTCCAGTATCAGGTTTACCCTCCTGGTTCCGTCTTTCAACAACCAATTGGATCCCCTGGCTATATTTCACCTTATGGTGAGTTACTTCCATCAACATACTCATGGGATTCATCTTTAACCACACAAGATGTAGCACAAGGGAATCGTTATAATGAATTGGCCAGTAAACCGAGTGGTAGATCGATCTTTTCTTCGCAGAGTCGTACTGGCAGTGGTATTGTGTCAAAGTCTGTGCCCTCATCTAATGTGAGCAACTCATCAGAAGTGAAGGGTTCGCCACCAATATTAGATGTTTCTTCAACACATGTTAAGCGCAACCAGCCAAAACAAGCAAACAAGGTAACCTTACTTCCTCCGTTCTGTTTTAACTATTGTTTTTGTTCCTGTTTATTTGTCGCTGTCTAAGTTCAATGCAATATTAACTATTGTTTTTTCGATATATGCTTACCTTATAATTTTAGAAAGAGAAATAAGTGAAACTATATATTGAACTGTTGGGGATTTCGTAGGAAAACAACAAATAATTTCATCAAAAGTAACAAAGTTTATTTATTATCCTTAAATTAGATTATTCTAAATAGTTTGTGGTGTTTTTCAGGCATCCATTTCTGGTCCTGTTCTCCATTCAGATGCAATGCCAAAGGGTTCTTTTCCCGTCGCAAAGTTTTCTACATACAATCAAGGAAAGAGTGGGTTCCCCTATCAAAACAACTTTCCTAATATGAAAGCAACAAGTACCAAGGGATGGGTTAGTACTGAGAAGCTGAAACTCAGAAACAAGGTTAATGATTCACTTAATGAGCAGAATCAAGGTCCTAGAACAGTTAATGCAAAAGGTACTTTAAACTCTGGAGGTAATTCTGGAGATAAGAGTGTCAACGGTGACACCAAAATCAGGACAGATCAATATAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTCGTCATTAAATCGTACAGTGAAGATGATGTTCATAAGAGCATCAAGTACGATGTATGGGCAAGTACACCTAATGGCAATAAGAGGCTCGACAATGCATTTCAGGATGCACAGAATCAAATGGAAGAGAAAGGAAGCAAGTGTCCCGTATTCCTTTTCTTTTCGGTATGCTATCAAGTTCAATCTCTGTTCTGTTAAAACCTACGGCCCGTTTGTGTTTTATTTGCTCATTTATTTATCTTAGAAAAATATGACTCCTCACATCAGTGTTTTGATAATTGTTGAGTTCAGGTCAACGCTAGTGGTCAATTTTGTGGAGTAGCCGAGATGATTGGACGAGTGGATTTCAACAAAAGTATGGATTTCTGGCAGCAAGATAAATGGAACGGATATTTCCCTGTCAAATGGCACATTATAAAAGATATTCCAAATCCTCAGCTACGGCATATTATCCTCGAGAATAATGATCACAAGCCTGTAACAAATAGTAGAGACACTCAAGAGGTTTGCATTTTTTTAACATTCTATTAAAGCAACTGTTTACAGAAATGTCCTAGTTATTTCTTCTGTATCTTCACTATTGTGTTAATTGTGTTAATGTTTCGACTTTCCAGATTCATTTTCCGCAAGGTATTGAAATGCTCAACATTTTCAAAAACTATGTATCAAGAACATCGATATTGGATGATTTTGATTTTTACGAAACCCGTCAGAAGGTCATGCAAGAGAAGAAAATAAGACAACCTATGCCGCATACCAATGTACAGGTTTGATTTTACACTTGTACCTTGTTCTTATTCCAAAGTTCTTACTTCTTACTAATGATAGCACTAGCACATATTGATTCCAATGAATTCTTTTTTGACATTATTGATGGATGAGTGCATGTGATTGTGGGACCATTTTTGCATAATTGTGGTTGGAGGAATCCTTTCACAATATTTAATAAATGCCTAGTTGACAAACTATTCTAAACTTGATACCATTTTTGGAATAATTTGGAGTTGGGAAATATCATAAAGTAATTAATAACTCTTTGGAGCATGTTCTTTTATTTCTCTCTTTTGTATTTCCCAATTCTTTATTTTTCTACTATGGTTGATGTGTTCTTTTGGTGTCCAATAATTTATTTAGAAGTCTTAGACCCACCTTTTTAATTGTGTTACAATTATGTCCCTTCTTTACTTTTCATTTATATAAAACTCCCAAATTTTCATAATCTACTCATAATTTTCACACATTTAATCAGCTAAGTTTTTTTACACTTATTTTTACTCGAAACTCGGCAAAACAATTCAAGACTAATAGTTGCGCATAGTCCAAACTAGTCCGACCGAAAAAACCATTTCATTTCTTTAGTTTTTACTTTGATCTCTTTGCTTATATATAATTTTGGTTGCAGCATATAGAAGACTTAACAAGTGCACTTGGATCAGTAGACATATCAGCTGTAAAGAACATGGAGGATCCTAAGTTGGTTGTAAAGAACATGGAGGATCCTAAGTTGGTTGAGAAAGTGAATGACTGA
Protein sequence

>MS.gene60934.t1

MNKKKLHGDSSTAEHNNSNMVSSKGGGSSPSDARSCVSSIGDTSGSFKEGDVDHEFQSTDQNVAYSAGSYYGYYYPGYGGFYGEQENQGYYVGADAMDFQYPVMQADNGSYVYLMPGYQTGYSSYFPVNTPGVDVQYQVYPPGSVFQQPIGSPGYISPYGELLPSTYSWDSSLTTQDVAQGNRYNELASKPSGRSIFSSQSRTGSGIVSKSVPSSNVSNSSEVKGSPPILDVSSTHVKRNQPKQANKASISGPVLHSDAMPKGSFPVAKFSTYNQGKSGFPYQNNFPNMKATSTKGWVSTEKLKLRNKVNDSLNEQNQGPRTVNAKGTLNSGGNSGDKSVNGDTKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNQMEEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHIILENNDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYETRQKVMQEKKIRQPMPHTNVQHIEDLTSALGSVDISAVKNMEDPKLVVKNMEDPKLVEKVND