AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00083

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00083.t1 MTR_2g032660 96.264 696 23 3 1 695 1 694 0.0 1365
MS.gene00083.t1 MTR_4g123630 67.879 660 198 9 37 691 1 651 0.0 881
MS.gene00083.t1 MTR_2g063460 43.232 495 208 16 70 536 93 542 1.99e-102 325
MS.gene00083.t1 MTR_2g063460 43.232 495 208 16 70 536 95 544 2.10e-102 325
MS.gene00083.t1 MTR_4g005110 39.504 524 268 17 46 536 54 561 2.26e-94 306
MS.gene00083.t1 MTR_8g088390 58.921 241 85 3 306 536 286 522 7.26e-88 287
MS.gene00083.t1 MTR_8g088390 58.921 241 85 3 306 536 351 587 1.75e-87 288
MS.gene00083.t1 MTR_7g085500 49.301 286 125 4 261 536 319 594 2.29e-81 271
MS.gene00083.t1 MTR_6g032970 53.101 258 100 4 293 536 318 568 3.34e-79 265
MS.gene00083.t1 MTR_2g005840 61.053 190 74 0 347 536 232 421 3.98e-77 255
MS.gene00083.t1 MTR_2g005840 61.053 190 74 0 347 536 263 452 1.75e-76 254
MS.gene00083.t1 MTR_2g032070 81.609 87 3 1 1 87 1 74 3.31e-42 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00083.t1 AT1G48110 48.328 658 308 13 36 681 1 638 0.0 563
MS.gene00083.t1 AT1G48110 48.328 658 308 13 36 681 1 638 0.0 563
MS.gene00083.t1 AT3G17330 42.857 679 265 19 37 683 1 588 5.39e-155 461
MS.gene00083.t1 AT3G17330 42.857 679 265 19 37 683 1 588 5.39e-155 461
MS.gene00083.t1 AT3G17330 48.009 427 171 9 285 683 83 486 1.79e-121 372
MS.gene00083.t1 AT3G13460 39.626 588 271 23 15 536 39 608 4.97e-95 308
MS.gene00083.t1 AT3G13460 39.626 588 271 23 15 536 38 607 6.44e-95 308
MS.gene00083.t1 AT3G13460 39.626 588 271 23 15 536 36 605 6.75e-95 308
MS.gene00083.t1 AT1G79270 68.500 200 60 1 341 537 278 477 5.92e-93 298
MS.gene00083.t1 AT1G79270 68.500 200 60 1 341 537 278 477 5.92e-93 298
MS.gene00083.t1 AT1G79270 68.500 200 60 1 341 537 278 477 5.92e-93 298
MS.gene00083.t1 AT1G79270 68.500 200 60 1 341 537 293 492 8.69e-93 298
MS.gene00083.t1 AT3G13060 60.256 234 80 3 307 536 318 542 4.24e-89 291
MS.gene00083.t1 AT3G13060 60.256 234 80 3 307 536 318 542 4.24e-89 291
MS.gene00083.t1 AT3G13060 60.256 234 80 3 307 536 340 564 5.95e-89 291
MS.gene00083.t1 AT3G13060 60.256 234 80 3 307 536 330 554 6.13e-89 291
MS.gene00083.t1 AT1G55500 54.508 244 101 2 293 530 279 518 1.76e-83 274
MS.gene00083.t1 AT1G55500 54.508 244 101 2 293 530 335 574 1.78e-83 275
MS.gene00083.t1 AT1G55500 54.508 244 101 2 293 530 292 531 2.07e-83 275
MS.gene00083.t1 AT1G55500 54.508 244 101 2 293 530 322 561 2.67e-83 275
MS.gene00083.t1 AT1G55500 54.508 244 101 2 293 530 335 574 3.43e-83 275
MS.gene00083.t1 AT1G55500 54.508 244 101 2 293 530 335 574 3.51e-83 275
MS.gene00083.t1 AT5G61020 55.000 240 97 3 306 538 192 427 1.01e-82 271
MS.gene00083.t1 AT5G61020 55.000 240 97 3 306 538 194 429 1.17e-82 270
MS.gene00083.t1 AT5G58190 54.217 249 101 5 291 536 254 492 4.71e-80 265
MS.gene00083.t1 AT5G58190 54.217 249 101 5 291 536 255 493 4.98e-80 265
MS.gene00083.t1 AT3G03950 54.918 244 101 3 293 536 174 408 5.14e-79 259
MS.gene00083.t1 AT3G03950 54.918 244 101 3 293 536 173 407 5.55e-79 258
MS.gene00083.t1 AT3G03950 54.918 244 101 3 293 536 177 411 5.90e-79 258
MS.gene00083.t1 AT1G27960 53.947 228 83 3 311 536 215 422 7.42e-77 254
MS.gene00083.t1 AT1G09810 56.019 216 91 1 347 558 170 385 7.75e-77 253
MS.gene00083.t1 AT1G09810 56.019 216 91 1 347 558 212 427 1.14e-76 254
MS.gene00083.t1 AT1G09810 56.019 216 91 1 347 558 193 408 2.20e-76 253
MS.gene00083.t1 AT1G27960 53.947 228 83 3 311 536 289 496 3.46e-76 254
MS.gene00083.t1 AT3G13060 56.682 217 77 4 307 515 340 547 2.55e-71 242
MS.gene00083.t1 AT3G13460 33.403 476 233 23 15 424 39 496 1.88e-33 135
MS.gene00083.t1 AT3G13060 48.361 122 50 3 307 424 340 452 8.70e-24 105
MS.gene00083.t1 AT1G27960 45.299 117 42 3 311 425 289 385 2.60e-20 94.7
MS.gene00083.t1 AT4G11970 29.747 158 95 3 366 518 72 218 1.43e-14 76.6
MS.gene00083.t1 AT4G11970 29.747 158 95 3 366 518 72 218 2.01e-14 75.9
MS.gene00083.t1 AT4G11970 29.747 158 95 3 366 518 72 218 2.42e-14 75.9
MS.gene00083.t1 AT4G11970 29.747 158 95 3 366 518 72 218 1.15e-13 74.3
MS.gene00083.t1 AT4G11970 29.747 158 95 3 366 518 72 218 1.15e-13 74.3

Find 146 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGGTTAGCTGGCTCTTC+TGG 0.117523 2.1:-59723620 MS.gene00083:CDS
TACCCTGCTTCCACCAATTA+TGG 0.150443 2.1:-59727197 MS.gene00083:CDS
TTGACACATGCAAATGTTTC+TGG 0.179968 2.1:-59726510 MS.gene00083:CDS
AGTATGATGTGCCTAAAATT+TGG 0.182955 2.1:+59725428 None:intergenic
GTATCTCTGCTATTAGTTAC+TGG 0.212229 2.1:+59725386 None:intergenic
TGCAACCTGCTTCGGGTTAA+TGG 0.220458 2.1:+59723715 None:intergenic
ACTCCAGATTGTTCAAAGTT+TGG 0.250796 2.1:+59727266 None:intergenic
TGAATTCTTCTCATACTTGC+TGG 0.263385 2.1:+59723901 None:intergenic
TGGCTCTGTTGACTTTAATA+AGG 0.265086 2.1:-59725528 MS.gene00083:CDS
TCAGTGCCAGTTAAAGTTAA+TGG 0.268987 2.1:-59723638 MS.gene00083:CDS
GCTAACCCATTAACTTTAAC+TGG 0.275132 2.1:+59723632 None:intergenic
CCGTATGTATATTACAACTA+TGG 0.288528 2.1:-59726891 MS.gene00083:CDS
CTCCAGATTGTTCAAAGTTT+GGG 0.301535 2.1:+59727267 None:intergenic
TGTACAATAATACCCATAAT+TGG 0.317280 2.1:+59727184 None:intergenic
TTTATGATATGCCACTTAAC+AGG 0.319471 2.1:+59725464 None:intergenic
ATGGGTTAGCTGGCTCTTCT+GGG 0.325136 2.1:-59723619 MS.gene00083:CDS
CCAGGTATATACGGATTATA+TGG 0.326972 2.1:+59726846 None:intergenic
TCATTCACAGACTTGATGTT+TGG 0.330984 2.1:+59723800 None:intergenic
AAATTACCCAGTAAGCATTC+TGG 0.345258 2.1:+59727471 None:intergenic
CAAAAGTTCAATGAAGCTTC+TGG 0.348903 2.1:-59726633 MS.gene00083:CDS
GATCCTAGTCCTAGGGCCTT+TGG 0.349547 2.1:+59726086 None:intergenic
ATGCTCTGATCAACAAATTC+AGG 0.351771 2.1:+59727224 None:intergenic
CTAGGAACCAGAATGCTTAC+TGG 0.356092 2.1:-59727478 MS.gene00083:CDS
CCTGTAGATACTATCTCTAA+TGG 0.362924 2.1:-59726215 MS.gene00083:CDS
ATGTGCCTAAAATTTGGATT+TGG 0.363738 2.1:+59725434 None:intergenic
CTCGTTACCACCTCCTACCT+TGG 0.368057 2.1:+59725965 None:intergenic
AGTTCTGCAAACTCCGTGTT+TGG 0.378137 2.1:-59726699 MS.gene00083:CDS
TTAATAAGGACATGGACTTT+TGG 0.378991 2.1:-59725514 MS.gene00083:CDS
CATTCACAGACTTGATGTTT+GGG 0.382329 2.1:+59723801 None:intergenic
CAGTGCCAGTTAAAGTTAAT+GGG 0.383647 2.1:-59723637 MS.gene00083:CDS
ACCCTGCTTCCACCAATTAT+GGG 0.384468 2.1:-59727196 MS.gene00083:CDS
ACCATGGCACCAGGTATATA+CGG 0.392677 2.1:+59726837 None:intergenic
AAAGCATTACAACCACAAAA+AGG 0.392730 2.1:-59723563 MS.gene00083:CDS
GAAACTTCTGATTAGGAGCT+TGG 0.393810 2.1:+59723991 None:intergenic
ACGGAGTTTGCAGAACTATC+AGG 0.395503 2.1:+59726705 None:intergenic
GCCAATGCTGGTATGAATAC+TGG 0.398898 2.1:+59723962 None:intergenic
TGAACCTATCTTTAAGATAG+AGG 0.408030 2.1:+59723742 None:intergenic
GTGTGGTCTTCTACAGTTCA+TGG 0.411680 2.1:-59725813 MS.gene00083:CDS
TAAGAATGTCAAGTTGTTCT+CGG 0.421487 2.1:+59723669 None:intergenic
CATCACTTGATCCTAGTCCT+AGG 0.422765 2.1:+59726078 None:intergenic
AGCATCATCTGCTGTTCATC+AGG 0.423199 2.1:-59726469 MS.gene00083:intron
TACGGATTATATGGATTGTA+TGG 0.425791 2.1:+59726855 None:intergenic
GGAAATCCTCCTTGTTGTAT+TGG 0.428102 2.1:+59725916 None:intergenic
GAATTCTTCTCATACTTGCT+GGG 0.432505 2.1:+59723902 None:intergenic
CTCACCGTGTACTGGACATC+TGG 0.433997 2.1:+59727007 None:intergenic
TCTTCTGGGTTCTTGAAAGT+TGG 0.434025 2.1:-59723605 MS.gene00083:CDS
AGCCCAAACTTTGAACAATC+TGG 0.434855 2.1:-59727269 MS.gene00083:CDS
TACCCATAATTGGTGGAAGC+AGG 0.435738 2.1:+59727194 None:intergenic
GTAGGAGTTGATGGCTCATA+TGG 0.439213 2.1:-59726816 MS.gene00083:CDS
CTGTAGATACTATCTCTAAT+GGG 0.443517 2.1:-59726214 MS.gene00083:CDS
AAATGTTAGTGCTGATGTAT+TGG 0.445062 2.1:-59726054 MS.gene00083:CDS
GTTCTGCTCAGAATTTGAAA+TGG 0.453546 2.1:+59723841 None:intergenic
CCCTTCTGATACCATGGCCT+CGG 0.454290 2.1:+59726563 None:intergenic
GGTGCCATGGTAGGAGTTGA+TGG 0.455986 2.1:-59726825 MS.gene00083:CDS
GATAATGTATTCTAAAGGAT+TGG 0.459236 2.1:-59724113 MS.gene00083:CDS
TGTGGAGTTGCAGAGATGAT+TGG 0.464797 2.1:-59725548 MS.gene00083:CDS
AGGCCAAAGGCCCTAGGACT+AGG 0.465607 2.1:-59726089 MS.gene00083:CDS
GTTAAAGTTAATGGGTTAGC+TGG 0.467289 2.1:-59723629 MS.gene00083:CDS
GATTCGAATCACCCGGTGAA+TGG 0.467931 2.1:-59727063 MS.gene00083:CDS
TTCCTCCCATTGTTAGCTCT+CGG 0.469671 2.1:+59726540 None:intergenic
AATTATGGGTATTATTGTAC+AGG 0.476299 2.1:-59727182 MS.gene00083:intron
ATACTGGTCCTCCCATTCAC+CGG 0.477464 2.1:+59727051 None:intergenic
GCAAGTATGAGAAGAATTCA+AGG 0.480414 2.1:-59723898 MS.gene00083:CDS
AGTTCATGGAAACAAGAAGT+TGG 0.483158 2.1:-59725799 MS.gene00083:CDS
ATTCGAATCACCCGGTGAAT+GGG 0.484015 2.1:-59727062 MS.gene00083:CDS
TAGTCAGACTCACCGTGTAC+TGG 0.484610 2.1:+59726999 None:intergenic
CAGGTTGCAGCAAAACAATC+TGG 0.488120 2.1:-59723701 MS.gene00083:CDS
GTTCATGGAAACAAGAAGTT+GGG 0.488312 2.1:-59725798 MS.gene00083:CDS
TGCTCTGATCAACAAATTCA+GGG 0.491217 2.1:+59727225 None:intergenic
GTGGAAGCTTTCCTGTTAAG+TGG 0.491998 2.1:-59725475 MS.gene00083:CDS
ATCCTCCTTGTTGTATTGGT+CGG 0.502648 2.1:+59725920 None:intergenic
ACAACAATATTCAACTTTCG+AGG 0.503642 2.1:+59723935 None:intergenic
AATTGCCATTAACCCGAAGC+AGG 0.505212 2.1:-59723720 MS.gene00083:CDS
TCATAAGCAGGTGAAGAAGC+AGG 0.507178 2.1:+59726753 None:intergenic
AATGTTAGTGCTGATGTATT+GGG 0.510099 2.1:-59726053 MS.gene00083:CDS
ATCTCCTCTATCTTAAAGAT+AGG 0.511747 2.1:-59723746 MS.gene00083:CDS
TTTCGAGGAGGTGCCAATGC+TGG 0.512758 2.1:+59723950 None:intergenic
CCATATAATCCGTATATACC+TGG 0.512895 2.1:-59726846 MS.gene00083:CDS
GAAGTTGGGAAATGCTTATG+AGG 0.513881 2.1:-59725784 MS.gene00083:CDS
TCCAGTATTCATACCAGCAT+TGG 0.514740 2.1:-59723963 MS.gene00083:CDS
ATCACTTGATCCTAGTCCTA+GGG 0.516411 2.1:+59726079 None:intergenic
ATGCAAATGTTTCTGGAAGC+AGG 0.519305 2.1:-59726503 MS.gene00083:CDS
TCAAACAAGTTCCGAGGCCA+TGG 0.528567 2.1:-59726574 MS.gene00083:CDS
CCATTAGAGATAGTATCTAC+AGG 0.528741 2.1:+59726215 None:intergenic
ATAGTAGCTTCTTCACGAAG+TGG 0.535163 2.1:-59726164 MS.gene00083:CDS
TGGCAGATAATGTATTCTAA+AGG 0.535367 2.1:-59724118 MS.gene00083:intron
ACCCATAATTGGTGGAAGCA+GGG 0.538655 2.1:+59727195 None:intergenic
GTGAATGGGAGGACCAGTAT+AGG 0.542108 2.1:-59727048 MS.gene00083:CDS
CAACTTGACATTCTTACAGT+AGG 0.545279 2.1:-59723662 MS.gene00083:CDS
TCTGGAGTAATGAATAATGA+AGG 0.545782 2.1:-59727251 MS.gene00083:CDS
CATCAAGTCTGTGAATGAGC+AGG 0.551415 2.1:-59723795 MS.gene00083:CDS
AGTCTTCAGTTGCTAAGCTT+AGG 0.552338 2.1:-59726109 MS.gene00083:CDS
AGTTGCTAAGCTTAGGCCAA+AGG 0.552702 2.1:-59726102 MS.gene00083:CDS
AAGGGCCGAGAGCTAACAAT+GGG 0.557060 2.1:-59726545 MS.gene00083:CDS
TCTCGGCCCTTCTGATACCA+TGG 0.560650 2.1:+59726557 None:intergenic
CCATAGTTGTAATATACATA+CGG 0.561725 2.1:+59726891 None:intergenic
CGTATGATGTTTCTCAAGCT+AGG 0.561789 2.1:-59727496 MS.gene00083:CDS
ACTTCTGCTTACAGAAGCGC+TGG 0.562983 2.1:+59726674 None:intergenic
TGAGAAGAATTCAAGGCTCA+AGG 0.565493 2.1:-59723891 MS.gene00083:CDS
TCCGTATATACCTGGTGCCA+TGG 0.566479 2.1:-59726838 MS.gene00083:CDS
TACTGGTCCTCCCATTCACC+GGG 0.566938 2.1:+59727052 None:intergenic
TGTTTGGGACATCAGAATTG+TGG 0.568309 2.1:+59723816 None:intergenic
TCCGAGGCCATGGTATCAGA+AGG 0.568894 2.1:-59726564 MS.gene00083:CDS
TGAACAAGGGGATCATAAGC+AGG 0.570873 2.1:+59726741 None:intergenic
GCAGCAAAACAATCTGGCAT+TGG 0.571218 2.1:-59723695 MS.gene00083:CDS
ACAATAATACCCATAATTGG+TGG 0.572117 2.1:+59727187 None:intergenic
AAGCTTAGGCCAAAGGCCCT+AGG 0.576887 2.1:-59726095 MS.gene00083:CDS
TATATACCTGGTGCCATGGT+AGG 0.577950 2.1:-59726834 MS.gene00083:CDS
GTGATCAAAATCGAGGCCCT+AGG 0.582768 2.1:-59726031 MS.gene00083:CDS
TTGCATTATCATAGTCAAGA+GGG 0.582783 2.1:+59725895 None:intergenic
GTAAGCAGAAGTGATGGAAG+AGG 0.583085 2.1:-59726663 MS.gene00083:CDS
TTCTTCTCATACTTGCTGGG+TGG 0.584664 2.1:+59723905 None:intergenic
TTTGCATTATCATAGTCAAG+AGG 0.589581 2.1:+59725894 None:intergenic
AAAGCTTATACGACCAAGGT+AGG 0.595919 2.1:-59725978 MS.gene00083:CDS
TAGGAACCAGAATGCTTACT+GGG 0.603432 2.1:-59727477 MS.gene00083:intron
AAAATTGTCTAGTTGAACAA+GGG 0.608179 2.1:+59726728 None:intergenic
CGAATCACCCGGTGAATGGG+AGG 0.610737 2.1:-59727059 MS.gene00083:CDS
TGTTGACTTTAATAAGGACA+TGG 0.611375 2.1:-59725522 MS.gene00083:CDS
GAAAATTGTCTAGTTGAACA+AGG 0.611684 2.1:+59726727 None:intergenic
GATTTAGGATTCGAATCACC+CGG 0.616404 2.1:-59727070 MS.gene00083:intron
AACAAATCAAACAAGTTCCG+AGG 0.617188 2.1:-59726580 MS.gene00083:CDS
TGAGCCATCAACTCCTACCA+TGG 0.618664 2.1:+59726821 None:intergenic
GTTATGCAGGTTAATGCTAG+CGG 0.619200 2.1:-59725578 MS.gene00083:intron
TCAACTCCTACCATGGCACC+AGG 0.621665 2.1:+59726828 None:intergenic
GCTTATACGACCAAGGTAGG+AGG 0.628706 2.1:-59725975 MS.gene00083:CDS
AGAAGCGCTGGCTCCAAACA+CGG 0.629135 2.1:+59726686 None:intergenic
GGCCGAGAGCTAACAATGGG+AGG 0.631197 2.1:-59726542 MS.gene00083:CDS
TATACGACCAAGGTAGGAGG+TGG 0.632143 2.1:-59725972 MS.gene00083:CDS
TGGCAGCAAGATAAATGGAG+TGG 0.637215 2.1:-59725494 MS.gene00083:CDS
AAATTGTCTAGTTGAACAAG+GGG 0.637347 2.1:+59726729 None:intergenic
CATAAGCAGGTGAAGAAGCA+GGG 0.637644 2.1:+59726754 None:intergenic
AAAGCATTAAATACAACGTG+TGG 0.642188 2.1:-59725830 MS.gene00083:CDS
GGAGTTGATGGCTCATATGG+AGG 0.645378 2.1:-59726813 MS.gene00083:CDS
TGGTCCAGATGTCCAGTACA+CGG 0.651143 2.1:-59727011 MS.gene00083:intron
GCTTCTGTAAGCAGAAGTGA+TGG 0.655628 2.1:-59726669 MS.gene00083:CDS
CTAGGACTAGGATCAAGTGA+TGG 0.656294 2.1:-59726077 MS.gene00083:CDS
ACAATATTCAACTTTCGAGG+AGG 0.668248 2.1:+59723938 None:intergenic
CCGAGGCCATGGTATCAGAA+GGG 0.669836 2.1:-59726563 MS.gene00083:CDS
GAAGGGCCGAGAGCTAACAA+TGG 0.669968 2.1:-59726546 MS.gene00083:CDS
TGTTATAAAATCATACAGTG+AGG 0.670580 2.1:-59725865 MS.gene00083:CDS
TGTGAAAGCTTATACGACCA+AGG 0.670917 2.1:-59725982 MS.gene00083:CDS
GCTCTGATCAACAAATTCAG+GGG 0.687027 2.1:+59727226 None:intergenic
TAATAGCAGAGATACACAAG+AGG 0.687410 2.1:-59725378 MS.gene00083:intron
GTATTGGGTGATCAAAATCG+AGG 0.696890 2.1:-59726038 MS.gene00083:CDS
TACCGACCAATACAACAAGG+AGG 0.733388 2.1:-59725922 MS.gene00083:CDS
TTATACCGACCAATACAACA+AGG 0.761173 2.1:-59725925 MS.gene00083:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAGAAATAATATAATCA+TGG + chr2.1:59726313-59726332 None:intergenic 10.0%
!! ACAAAACTTTGAATATTTAT+AGG + chr2.1:59725847-59725866 None:intergenic 15.0%
!! ACAAAATTATGAATATTTAC+AGG - chr2.1:59726064-59726083 MS.gene00083:CDS 15.0%
!! ATATATCAATAGTTGTTTAA+TGG - chr2.1:59723621-59723640 MS.gene00083:CDS 15.0%
!! ATTAATGATTTATTATTTGG+TGG - chr2.1:59723940-59723959 MS.gene00083:CDS 15.0%
!! CAAAACTTTGAATATTTATA+GGG + chr2.1:59725846-59725865 None:intergenic 15.0%
!! CAAAATTATGAATATTTACA+GGG - chr2.1:59726065-59726084 MS.gene00083:CDS 15.0%
!! TAAATCCGTAAAAAATATTA+GGG - chr2.1:59725803-59725822 MS.gene00083:CDS 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG - chr2.1:59726033-59726052 MS.gene00083:CDS 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG - chr2.1:59726034-59726053 MS.gene00083:CDS 15.0%
!!! AATTTACCTTGTTAATATTT+TGG + chr2.1:59726109-59726128 None:intergenic 15.0%
!!! ATTAACCCTAATATTTTTTA+CGG + chr2.1:59725811-59725830 None:intergenic 15.0%
!!! ATTTACCTTGTTAATATTTT+GGG + chr2.1:59726108-59726127 None:intergenic 15.0%
!!! TAATTTTATCATTTTGGTTT+AGG - chr2.1:59723708-59723727 MS.gene00083:CDS 15.0%
!!! TAGTAAATTTTGCTTATTAT+CGG - chr2.1:59726833-59726852 MS.gene00083:CDS 15.0%
!! ACAGAAAAAAATAGAAAGAT+AGG + chr2.1:59725312-59725331 None:intergenic 20.0%
!! ACTATTGATATATCAAAGTT+CGG + chr2.1:59723614-59723633 None:intergenic 20.0%
!! ATATTCAAATGTAATCCAAA+AGG + chr2.1:59724601-59724620 None:intergenic 20.0%
!! ATTAACCCAAAATATTAACA+AGG - chr2.1:59726100-59726119 MS.gene00083:CDS 20.0%
!! CTAAATCCGTAAAAAATATT+AGG - chr2.1:59725802-59725821 MS.gene00083:CDS 20.0%
!! TATGAATTTAACTAGATGTT+TGG - chr2.1:59726620-59726639 MS.gene00083:CDS 20.0%
!! TCAAGTAAATAAATTCATGT+CGG + chr2.1:59726744-59726763 None:intergenic 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + chr2.1:59725938-59725957 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr2.1:59725878-59725897 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr2.1:59725877-59725896 None:intergenic 20.0%
!!! ATTTATTATTTGGTGGATTT+AGG - chr2.1:59723947-59723966 MS.gene00083:CDS 20.0%
!!! ATTTTTTTCTGTAAGTTTGA+CGG - chr2.1:59725320-59725339 MS.gene00083:intron 20.0%
!!! TGCTGATGAAATTTTTTTAT+AGG - chr2.1:59725974-59725993 MS.gene00083:CDS 20.0%
!!! TGTGTGTAATTTTATCATTT+TGG - chr2.1:59723702-59723721 MS.gene00083:CDS 20.0%
!!! TTATTTTTGGAAACTACTTT+TGG + chr2.1:59727506-59727525 None:intergenic 20.0%
!!! TTTTGGATTTAGTTGATATT+AGG - chr2.1:59726671-59726690 MS.gene00083:CDS 20.0%
!!! TTTTGGGTTAATTAAGTAAA+TGG + chr2.1:59726092-59726111 None:intergenic 20.0%
! AAAATTGTCTAGTTGAACAA+GGG + chr2.1:59724307-59724326 None:intergenic 25.0%
! AATCCAACATTAAAACCAAA+AGG + chr2.1:59726792-59726811 None:intergenic 25.0%
! AATTATGGGTATTATTGTAC+AGG - chr2.1:59723850-59723869 MS.gene00083:CDS 25.0%
! AGAATTAACAGTTGGATTTA+TGG + chr2.1:59726354-59726373 None:intergenic 25.0%
! ATGCTGATGGAAAATATTAT+AGG - chr2.1:59726004-59726023 MS.gene00083:CDS 25.0%
! ATGTTAAAATTAGTCGTTGT+AGG - chr2.1:59726401-59726420 MS.gene00083:intron 25.0%
! CCATAGTTGTAATATACATA+CGG + chr2.1:59724144-59724163 None:intergenic 25.0%
! GAATTAACAGTTGGATTTAT+GGG + chr2.1:59726353-59726372 None:intergenic 25.0%
! TATAATGATTGTGTGTATTG+AGG - chr2.1:59723661-59723680 MS.gene00083:CDS 25.0%
! TATAGGAATAAAAATGCTGA+TGG - chr2.1:59725991-59726010 MS.gene00083:CDS 25.0%
! TCTTTAACAGAATTAACAGT+TGG + chr2.1:59726362-59726381 None:intergenic 25.0%
! TGCTGATGGAAAATATTATA+GGG - chr2.1:59726005-59726024 MS.gene00083:CDS 25.0%
! TGTACAATAATACCCATAAT+TGG + chr2.1:59723851-59723870 None:intergenic 25.0%
! TGTTATAAAATCATACAGTG+AGG - chr2.1:59725167-59725186 MS.gene00083:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr2.1:59725910-59725929 MS.gene00083:CDS 25.0%
!! ATGTTCCAAATCCAAATTTT+AGG - chr2.1:59725593-59725612 MS.gene00083:intron 25.0%
!! ATTTAGTTGATATTAGGATC+TGG - chr2.1:59726677-59726696 MS.gene00083:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr2.1:59725911-59725930 MS.gene00083:CDS 25.0%
!! GATAATGTATTCTAAAGGAT+TGG - chr2.1:59726919-59726938 MS.gene00083:intron 25.0%
!!! ATTTATGGGCTTTAGATAAA+AGG + chr2.1:59726339-59726358 None:intergenic 25.0%
!!! TTACCTTTTGGTTTTAATGT+TGG - chr2.1:59726786-59726805 MS.gene00083:CDS 25.0%
AAATGCATTTGCAAGTTCTT+TGG - chr2.1:59723881-59723900 MS.gene00083:CDS 30.0%
AAATTGTCTAGTTGAACAAG+GGG + chr2.1:59724306-59724325 None:intergenic 30.0%
AATTGAATCATTGGAGAACT+CGG + chr2.1:59726504-59726523 None:intergenic 30.0%
ACAACAATATTCAACTTTCG+AGG + chr2.1:59727100-59727119 None:intergenic 30.0%
ACAATAATACCCATAATTGG+TGG + chr2.1:59723848-59723867 None:intergenic 30.0%
AGAATAAGACACTCAAGAAA+TGG + chr2.1:59726468-59726487 None:intergenic 30.0%
AGTAATGTATTAGTGGTTGA+TGG - chr2.1:59724746-59724765 MS.gene00083:intron 30.0%
AGTATGATGTGCCTAAAATT+TGG + chr2.1:59725607-59725626 None:intergenic 30.0%
ATCTCCTCTATCTTAAAGAT+AGG - chr2.1:59727286-59727305 MS.gene00083:CDS 30.0%
ATGTGCCTAAAATTTGGATT+TGG + chr2.1:59725601-59725620 None:intergenic 30.0%
CCGTATGTATATTACAACTA+TGG - chr2.1:59724141-59724160 MS.gene00083:intron 30.0%
CTGTAGATACTATCTCTAAT+GGG - chr2.1:59724818-59724837 MS.gene00083:intron 30.0%
GAAAATTGTCTAGTTGAACA+AGG + chr2.1:59724308-59724327 None:intergenic 30.0%
GAATTTAACTAGATGTTTGG+TGG - chr2.1:59726623-59726642 MS.gene00083:CDS 30.0%
GCAAACAACCATATGTTAAT+TGG + chr2.1:59726538-59726557 None:intergenic 30.0%
GTAGATCAGTAATGTATTAG+TGG - chr2.1:59724739-59724758 MS.gene00083:intron 30.0%
TCCAAAATCAAGATTAACGT+AGG + chr2.1:59726658-59726677 None:intergenic 30.0%
TCTCCAATGATTCAATTGAT+TGG - chr2.1:59726507-59726526 MS.gene00083:CDS 30.0%
TGGCAGATAATGTATTCTAA+AGG - chr2.1:59726914-59726933 MS.gene00083:CDS 30.0%
TTAACCTGCATAACAAAAAC+AGG + chr2.1:59725448-59725467 None:intergenic 30.0%
TTCAAATGTAATCCAAAAGG+AGG + chr2.1:59724598-59724617 None:intergenic 30.0%
TTGCATTATCATAGTCAAGA+GGG + chr2.1:59725140-59725159 None:intergenic 30.0%
TTTGCATTATCATAGTCAAG+AGG + chr2.1:59725141-59725160 None:intergenic 30.0%
! AAAGCATTAAATACAACGTG+TGG - chr2.1:59725202-59725221 MS.gene00083:intron 30.0%
! AAAGCATTACAACCACAAAA+AGG - chr2.1:59727469-59727488 MS.gene00083:intron 30.0%
! AAAGTATCAGCTGAAAAATC+TGG - chr2.1:59725279-59725298 MS.gene00083:intron 30.0%
! AGGTATAATTTTCCTCCTTT+TGG - chr2.1:59724583-59724602 MS.gene00083:intron 30.0%
! ATTTTGCTTATTATCGGTCA+TGG - chr2.1:59726839-59726858 MS.gene00083:CDS 30.0%
! GTGTTTTCTTCTTTATCTCA+GGG - chr2.1:59724099-59724118 MS.gene00083:CDS 30.0%
! TAAGAATGTCAAGTTGTTCT+CGG + chr2.1:59727366-59727385 None:intergenic 30.0%
! TACGGATTATATGGATTGTA+TGG + chr2.1:59724180-59724199 None:intergenic 30.0%
! TCTGGAGTAATGAATAATGA+AGG - chr2.1:59723781-59723800 MS.gene00083:CDS 30.0%
! TGTGTTTTCTTCTTTATCTC+AGG - chr2.1:59724098-59724117 MS.gene00083:CDS 30.0%
! TTAATAAGGACATGGACTTT+TGG - chr2.1:59725518-59725537 MS.gene00083:CDS 30.0%
! TTTATGATATGCCACTTAAC+AGG + chr2.1:59725571-59725590 None:intergenic 30.0%
! TTTGTGGTTGTAATGCTTTT+GGG + chr2.1:59727468-59727487 None:intergenic 30.0%
! TTTTGTGGTTGTAATGCTTT+TGG + chr2.1:59727469-59727488 None:intergenic 30.0%
!! AAATGTTAGTGCTGATGTAT+TGG - chr2.1:59724978-59724997 MS.gene00083:intron 30.0%
!! AATGTTAGTGCTGATGTATT+GGG - chr2.1:59724979-59724998 MS.gene00083:intron 30.0%
!! ATTTGCAAGTTCTTTGGTTT+TGG - chr2.1:59723887-59723906 MS.gene00083:CDS 30.0%
!! GTTGATGGAAATTTTTGACA+GGG - chr2.1:59725943-59725962 MS.gene00083:CDS 30.0%
!! TGAACCTATCTTTAAGATAG+AGG + chr2.1:59727293-59727312 None:intergenic 30.0%
!! TGTTGACTTTAATAAGGACA+TGG - chr2.1:59725510-59725529 MS.gene00083:CDS 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG - chr2.1:59725942-59725961 MS.gene00083:CDS 30.0%
!! TTAATGTCTGCTTTTCATAC+TGG - chr2.1:59725403-59725422 MS.gene00083:CDS 30.0%
!! TTTCTTTTGTAGGAGTGTAT+AGG - chr2.1:59724717-59724736 MS.gene00083:intron 30.0%
!! TTTTTGGAAACTACTTTTGG+CGG + chr2.1:59727503-59727522 None:intergenic 30.0%
!!! ATCATTTTGGTTTAGGTTGA+AGG - chr2.1:59723715-59723734 MS.gene00083:CDS 30.0%
!!! GACTTTTGAAACTTCTGATT+AGG + chr2.1:59727051-59727070 None:intergenic 30.0%
!!! TATAGGATTTTTGGTGTAGA+TGG - chr2.1:59724001-59724020 MS.gene00083:CDS 30.0%
!!! TCATTTTGGTTTAGGTTGAA+GGG - chr2.1:59723716-59723735 MS.gene00083:CDS 30.0%
AAATTACCCAGTAAGCATTC+TGG + chr2.1:59723564-59723583 None:intergenic 35.0%
AACAAATCAAACAAGTTCCG+AGG - chr2.1:59724452-59724471 MS.gene00083:intron 35.0%
AACACATTAATATCAGCCAC+AGG + chr2.1:59724084-59724103 None:intergenic 35.0%
AACCTTAACCAAACACAAAC+AGG + chr2.1:59726564-59726583 None:intergenic 35.0%
ACAATATTCAACTTTCGAGG+AGG + chr2.1:59727097-59727116 None:intergenic 35.0%
ACTCCAGATTGTTCAAAGTT+TGG + chr2.1:59723769-59723788 None:intergenic 35.0%
AGTTCATGGAAACAAGAAGT+TGG - chr2.1:59725233-59725252 MS.gene00083:intron 35.0%
ATGCTCTGATCAACAAATTC+AGG + chr2.1:59723811-59723830 None:intergenic 35.0%
CAAAAGTTCAATGAAGCTTC+TGG - chr2.1:59724399-59724418 MS.gene00083:intron 35.0%
CAACTTGACATTCTTACAGT+AGG - chr2.1:59727370-59727389 MS.gene00083:intron 35.0%
CAGCCAATCAATTGAATCAT+TGG + chr2.1:59726513-59726532 None:intergenic 35.0%
CAGTGCCAGTTAAAGTTAAT+GGG - chr2.1:59727395-59727414 MS.gene00083:intron 35.0%
CATTCACAGACTTGATGTTT+GGG + chr2.1:59727234-59727253 None:intergenic 35.0%
CCATATAATCCGTATATACC+TGG - chr2.1:59724186-59724205 MS.gene00083:intron 35.0%
CCATTAGAGATAGTATCTAC+AGG + chr2.1:59724820-59724839 None:intergenic 35.0%
CCTGTAGATACTATCTCTAA+TGG - chr2.1:59724817-59724836 MS.gene00083:intron 35.0%
CTACACCAAAAATCCTATAC+TGG + chr2.1:59724000-59724019 None:intergenic 35.0%
CTCCAGATTGTTCAAAGTTT+GGG + chr2.1:59723768-59723787 None:intergenic 35.0%
GAATTCTTCTCATACTTGCT+GGG + chr2.1:59727133-59727152 None:intergenic 35.0%
GCAAGTATGAGAAGAATTCA+AGG - chr2.1:59727134-59727153 MS.gene00083:intron 35.0%
GCTAACCCATTAACTTTAAC+TGG + chr2.1:59727403-59727422 None:intergenic 35.0%
GTATCTCTGCTATTAGTTAC+TGG + chr2.1:59725649-59725668 None:intergenic 35.0%
GTTCATGGAAACAAGAAGTT+GGG - chr2.1:59725234-59725253 MS.gene00083:intron 35.0%
GTTCTGCTCAGAATTTGAAA+TGG + chr2.1:59727194-59727213 None:intergenic 35.0%
TAATAGCAGAGATACACAAG+AGG - chr2.1:59725654-59725673 MS.gene00083:intron 35.0%
TCAGTGCCAGTTAAAGTTAA+TGG - chr2.1:59727394-59727413 MS.gene00083:intron 35.0%
TCATTCACAGACTTGATGTT+TGG + chr2.1:59727235-59727254 None:intergenic 35.0%
TGAATTCTTCTCATACTTGC+TGG + chr2.1:59727134-59727153 None:intergenic 35.0%
TGCTCTGATCAACAAATTCA+GGG + chr2.1:59723810-59723829 None:intergenic 35.0%
TGCTTAAGGAAAATGTCACA+AGG + chr2.1:59725906-59725925 None:intergenic 35.0%
TGGCTGAACCAATTAACATA+TGG - chr2.1:59726527-59726546 MS.gene00083:CDS 35.0%
TTAGGGACCAAAAATGTTGA+TGG - chr2.1:59725928-59725947 MS.gene00083:CDS 35.0%
TTATACCGACCAATACAACA+AGG - chr2.1:59725107-59725126 MS.gene00083:intron 35.0%
TTGACACATGCAAATGTTTC+TGG - chr2.1:59724522-59724541 MS.gene00083:intron 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr2.1:59725920-59725939 None:intergenic 35.0%
! AAGCTTCTGGTAACTTTTCT+AGG - chr2.1:59724412-59724431 MS.gene00083:intron 35.0%
! ACTTTTGGCAGCAAGATAAA+TGG - chr2.1:59725533-59725552 MS.gene00083:CDS 35.0%
! CCAGGTATATACGGATTATA+TGG + chr2.1:59724189-59724208 None:intergenic 35.0%
! CTGTTGATCAGTTTACCTTT+TGG - chr2.1:59726774-59726793 MS.gene00083:CDS 35.0%
! GATTTTGCAGCAAATGCTAA+TGG - chr2.1:59724898-59724917 MS.gene00083:intron 35.0%
! GCCTACGTTAATCTTGATTT+TGG - chr2.1:59726654-59726673 MS.gene00083:CDS 35.0%
! TAGATGTTTGGTGGTTTACT+AGG - chr2.1:59726632-59726651 MS.gene00083:CDS 35.0%
! TTTTCTTCTTTATCTCAGGG+TGG - chr2.1:59724102-59724121 MS.gene00083:CDS 35.0%
!! AAGCAGGGTTTTGATAATTG+GGG + chr2.1:59724266-59724285 None:intergenic 35.0%
!! AGAAGCAGGGTTTTGATAAT+TGG + chr2.1:59724268-59724287 None:intergenic 35.0%
!! GAAGCAGGGTTTTGATAATT+GGG + chr2.1:59724267-59724286 None:intergenic 35.0%
!! GTTAAAGTTAATGGGTTAGC+TGG - chr2.1:59727403-59727422 MS.gene00083:intron 35.0%
!! GTTTTGATCTACTAGTCCTA+GGG + chr2.1:59725020-59725039 None:intergenic 35.0%
!! TGGCTCTGTTGACTTTAATA+AGG - chr2.1:59725504-59725523 MS.gene00083:CDS 35.0%
!! TTTTCTAGTAGAGACCTCTA+GGG - chr2.1:59725752-59725771 MS.gene00083:CDS 35.0%
!!! CATTTTGGTTTAGGTTGAAG+GGG - chr2.1:59723717-59723736 MS.gene00083:CDS 35.0%
!!! GATAGCTGTGTTTTGAAAAC+TGG + chr2.1:59726260-59726279 None:intergenic 35.0%
!!! GTGAACGCTATTTCTTTTGT+AGG - chr2.1:59724707-59724726 MS.gene00083:intron 35.0%
!!! TCATCCTGTTTTTGTTATGC+AGG - chr2.1:59725441-59725460 MS.gene00083:CDS 35.0%
!!! TGTTTTGATCTACTAGTCCT+AGG + chr2.1:59725021-59725040 None:intergenic 35.0%
AAACTGATCAACAGTTCGCT+TGG + chr2.1:59726768-59726787 None:intergenic 40.0%
AAAGCTTATACGACCAAGGT+AGG - chr2.1:59725054-59725073 MS.gene00083:intron 40.0%
AATCAGACTGCAGTACTATC+GGG - chr2.1:59726182-59726201 MS.gene00083:CDS 40.0%
AGCCCAAACTTTGAACAATC+TGG - chr2.1:59723763-59723782 MS.gene00083:CDS 40.0%
AGTCTTCAGTTGCTAAGCTT+AGG - chr2.1:59724923-59724942 MS.gene00083:intron 40.0%
ATAGTAGCTTCTTCACGAAG+TGG - chr2.1:59724868-59724887 MS.gene00083:intron 40.0%
ATCACTTGATCCTAGTCCTA+GGG + chr2.1:59724956-59724975 None:intergenic 40.0%
CAATCAGACTGCAGTACTAT+CGG - chr2.1:59726181-59726200 MS.gene00083:CDS 40.0%
CGTATGATGTTTCTCAAGCT+AGG - chr2.1:59723536-59723555 MS.gene00083:CDS 40.0%
GAAACTTCTGATTAGGAGCT+TGG + chr2.1:59727044-59727063 None:intergenic 40.0%
GAAGTTGGGAAATGCTTATG+AGG - chr2.1:59725248-59725267 MS.gene00083:intron 40.0%
GCTCTGATCAACAAATTCAG+GGG + chr2.1:59723809-59723828 None:intergenic 40.0%
GTATTGAATGTTCTTGCTCG+TGG - chr2.1:59726894-59726913 MS.gene00083:CDS 40.0%
GTATTGGGTGATCAAAATCG+AGG - chr2.1:59724994-59725013 MS.gene00083:intron 40.0%
GTTATGCAGGTTAATGCTAG+CGG - chr2.1:59725454-59725473 MS.gene00083:CDS 40.0%
TAGGAACCAGAATGCTTACT+GGG - chr2.1:59723555-59723574 MS.gene00083:CDS 40.0%
TCCAGTATTCATACCAGCAT+TGG - chr2.1:59727069-59727088 MS.gene00083:intron 40.0%
TCTTCTGGGTTCTTGAAAGT+TGG - chr2.1:59727427-59727446 MS.gene00083:intron 40.0%
TGAGAAGAATTCAAGGCTCA+AGG - chr2.1:59727141-59727160 MS.gene00083:intron 40.0%
TGCCTGTTTGTGTTTGGTTA+AGG - chr2.1:59726559-59726578 MS.gene00083:CDS 40.0%
TGTGAAAGCTTATACGACCA+AGG - chr2.1:59725050-59725069 MS.gene00083:intron 40.0%
TTTGCTTGCCTGTTTGTGTT+TGG - chr2.1:59726553-59726572 MS.gene00083:CDS 40.0%
! AATGCTAGCGGTCAATTTTG+TGG - chr2.1:59725466-59725485 MS.gene00083:CDS 40.0%
! ATCCTCCTTGTTGTATTGGT+CGG + chr2.1:59725115-59725134 None:intergenic 40.0%
! GAGGACCAGTATAGGATTTT+TGG - chr2.1:59723992-59724011 MS.gene00083:CDS 40.0%
! GATCGTGCATGATCTTTTGA+CGG + chr2.1:59727015-59727034 None:intergenic 40.0%
! GATTTAGGATTCGAATCACC+CGG - chr2.1:59723962-59723981 MS.gene00083:CDS 40.0%
! GGAAATCCTCCTTGTTGTAT+TGG + chr2.1:59725119-59725138 None:intergenic 40.0%
! GTATCTCTCTGTCCAGTTTT+GGG - chr2.1:59724058-59724077 MS.gene00083:CDS 40.0%
! GTTATGCTGTTCTGTTTTGC+AGG - chr2.1:59724768-59724787 MS.gene00083:intron 40.0%
! TGTATCTCTCTGTCCAGTTT+TGG - chr2.1:59724057-59724076 MS.gene00083:CDS 40.0%
! TGTTTGGGACATCAGAATTG+TGG + chr2.1:59727219-59727238 None:intergenic 40.0%
!! AGGGTTTTGATAATTGGGGA+GGG + chr2.1:59724262-59724281 None:intergenic 40.0%
!! ATGCAAATGTTTCTGGAAGC+AGG - chr2.1:59724529-59724548 MS.gene00083:intron 40.0%
!! CTTTTCTAGTAGAGACCTCT+AGG - chr2.1:59725751-59725770 MS.gene00083:CDS 40.0%
!!! GTTTTGAAAACTGGTCCAGA+CGG + chr2.1:59726251-59726270 None:intergenic 40.0%
!!! TCTTTGGTTTTGGTGGTAAC+TGG - chr2.1:59723897-59723916 MS.gene00083:CDS 40.0%
!!! TGCAAGTTCTTTGGTTTTGG+TGG - chr2.1:59723890-59723909 MS.gene00083:CDS 40.0%
AATCAGCGACTGAAGTAGTC+GGG + chr2.1:59724632-59724651 None:intergenic 45.0%
AATTGCCATTAACCCGAAGC+AGG - chr2.1:59727312-59727331 MS.gene00083:intron 45.0%
ACCATGGCACCAGGTATATA+CGG + chr2.1:59724198-59724217 None:intergenic 45.0%
ACCCATAATTGGTGGAAGCA+GGG + chr2.1:59723840-59723859 None:intergenic 45.0%
ACCCTGCTTCCACCAATTAT+GGG - chr2.1:59723836-59723855 MS.gene00083:CDS 45.0%
ACGGAGTTTGCAGAACTATC+AGG + chr2.1:59724330-59724349 None:intergenic 45.0%
AGCATCATCTGCTGTTCATC+AGG - chr2.1:59724563-59724582 MS.gene00083:intron 45.0%
AGTTCTGCAAACTCCGTGTT+TGG - chr2.1:59724333-59724352 MS.gene00083:intron 45.0%
AGTTGCTAAGCTTAGGCCAA+AGG - chr2.1:59724930-59724949 MS.gene00083:intron 45.0%
ATTCGAATCACCCGGTGAAT+GGG - chr2.1:59723970-59723989 MS.gene00083:CDS 45.0%
CAATCAGCGACTGAAGTAGT+CGG + chr2.1:59724633-59724652 None:intergenic 45.0%
CAGGTTGCAGCAAAACAATC+TGG - chr2.1:59727331-59727350 MS.gene00083:intron 45.0%
CATAAGCAGGTGAAGAAGCA+GGG + chr2.1:59724281-59724300 None:intergenic 45.0%
CATCAAGTCTGTGAATGAGC+AGG - chr2.1:59727237-59727256 MS.gene00083:CDS 45.0%
CATCACTTGATCCTAGTCCT+AGG + chr2.1:59724957-59724976 None:intergenic 45.0%
CTAGGAACCAGAATGCTTAC+TGG - chr2.1:59723554-59723573 MS.gene00083:CDS 45.0%
CTAGGACTAGGATCAAGTGA+TGG - chr2.1:59724955-59724974 MS.gene00083:intron 45.0%
GCAGCAAAACAATCTGGCAT+TGG - chr2.1:59727337-59727356 MS.gene00083:intron 45.0%
GCCAATGCTGGTATGAATAC+TGG + chr2.1:59727073-59727092 None:intergenic 45.0%
GCTTCTGTAAGCAGAAGTGA+TGG - chr2.1:59724363-59724382 MS.gene00083:intron 45.0%
GTACTGCAGTCTGATTGAAC+TGG + chr2.1:59726178-59726197 None:intergenic 45.0%
GTGGAAGCTTTCCTGTTAAG+TGG - chr2.1:59725557-59725576 MS.gene00083:CDS 45.0%
GTGTGGTCTTCTACAGTTCA+TGG - chr2.1:59725219-59725238 MS.gene00083:intron 45.0%
TACCCATAATTGGTGGAAGC+AGG + chr2.1:59723841-59723860 None:intergenic 45.0%
TACCCTGCTTCCACCAATTA+TGG - chr2.1:59723835-59723854 MS.gene00083:CDS 45.0%
TACCGACCAATACAACAAGG+AGG - chr2.1:59725110-59725129 MS.gene00083:intron 45.0%
TCATAAGCAGGTGAAGAAGC+AGG + chr2.1:59724282-59724301 None:intergenic 45.0%
TGAACAAGGGGATCATAAGC+AGG + chr2.1:59724294-59724313 None:intergenic 45.0%
TGGCAGCAAGATAAATGGAG+TGG - chr2.1:59725538-59725557 MS.gene00083:CDS 45.0%
TGTGGAGTTGCAGAGATGAT+TGG - chr2.1:59725484-59725503 MS.gene00083:CDS 45.0%
! GATCTGGTTGTTGTTGCCAT+GGG - chr2.1:59726693-59726712 MS.gene00083:CDS 45.0%
! GTAAGCAGAAGTGATGGAAG+AGG - chr2.1:59724369-59724388 MS.gene00083:intron 45.0%
! TGTTTTGCTGCAACCTGCTT+CGG + chr2.1:59727328-59727347 None:intergenic 45.0%
! TTCCTCCCATTGTTAGCTCT+CGG + chr2.1:59724495-59724514 None:intergenic 45.0%
! TTCTTCTCATACTTGCTGGG+TGG + chr2.1:59727130-59727149 None:intergenic 45.0%
!! CAGGGTTTTGATAATTGGGG+AGG + chr2.1:59724263-59724282 None:intergenic 45.0%
!! GTAGGAGTTGATGGCTCATA+TGG - chr2.1:59724216-59724235 MS.gene00083:intron 45.0%
!! TATATACCTGGTGCCATGGT+AGG - chr2.1:59724198-59724217 MS.gene00083:intron 45.0%
!! TATATTAATGATTTATTATT+TGG - chr2.1:59723937-59723956 MS.gene00083:CDS 5.0%
AAACCAACCGGTGAATTGGC+TGG - chr2.1:59726208-59726227 MS.gene00083:CDS 50.0%
AAGGGCCGAGAGCTAACAAT+GGG - chr2.1:59724487-59724506 MS.gene00083:intron 50.0%
ACTATCGGGCTCAAACCAAC+CGG - chr2.1:59726196-59726215 MS.gene00083:CDS 50.0%
ATACTGGTCCTCCCATTCAC+CGG + chr2.1:59723984-59724003 None:intergenic 50.0%
ATGATGCACTGCTACACCCA+TGG + chr2.1:59726712-59726731 None:intergenic 50.0%
CCAATTGAACCATGCCCTAG+AGG + chr2.1:59725769-59725788 None:intergenic 50.0%
GATTCGAATCACCCGGTGAA+TGG - chr2.1:59723969-59723988 MS.gene00083:CDS 50.0%
GCTCAAACCAACCGGTGAAT+TGG - chr2.1:59726204-59726223 MS.gene00083:CDS 50.0%
GCTTATACGACCAAGGTAGG+AGG - chr2.1:59725057-59725076 MS.gene00083:intron 50.0%
GTGAATGGGAGGACCAGTAT+AGG - chr2.1:59723984-59724003 MS.gene00083:CDS 50.0%
GTGATCAAAATCGAGGCCCT+AGG - chr2.1:59725001-59725020 MS.gene00083:intron 50.0%
TAGTCAGACTCACCGTGTAC+TGG + chr2.1:59724036-59724055 None:intergenic 50.0%
TATACGACCAAGGTAGGAGG+TGG - chr2.1:59725060-59725079 MS.gene00083:intron 50.0%
TCAAACAAGTTCCGAGGCCA+TGG - chr2.1:59724458-59724477 MS.gene00083:intron 50.0%
TGAGCCATCAACTCCTACCA+TGG + chr2.1:59724214-59724233 None:intergenic 50.0%
TGGTCCAGATGTCCAGTACA+CGG - chr2.1:59724021-59724040 MS.gene00083:CDS 50.0%
! ACTTCTGCTTACAGAAGCGC+TGG + chr2.1:59724361-59724380 None:intergenic 50.0%
! GGATCTGGTTGTTGTTGCCA+TGG - chr2.1:59726692-59726711 MS.gene00083:CDS 50.0%
! GTTTTGCTGCAACCTGCTTC+GGG + chr2.1:59727327-59727346 None:intergenic 50.0%
! TCCGTATATACCTGGTGCCA+TGG - chr2.1:59724194-59724213 MS.gene00083:intron 50.0%
! TGCAACCTGCTTCGGGTTAA+TGG + chr2.1:59727320-59727339 None:intergenic 50.0%
!! AATGGGTTAGCTGGCTCTTC+TGG - chr2.1:59727412-59727431 MS.gene00083:intron 50.0%
!! ATGGGTTAGCTGGCTCTTCT+GGG - chr2.1:59727413-59727432 MS.gene00083:intron 50.0%
!! CCTCTAGGGCATGGTTCAAT+TGG - chr2.1:59725766-59725785 MS.gene00083:CDS 50.0%
!! GGAGTTGATGGCTCATATGG+AGG - chr2.1:59724219-59724238 MS.gene00083:intron 50.0%
!! TAGTAGAGACCTCTAGGGCA+TGG - chr2.1:59725757-59725776 MS.gene00083:CDS 50.0%
AAGCTTAGGCCAAAGGCCCT+AGG - chr2.1:59724937-59724956 MS.gene00083:intron 55.0%
ATCAGCCACAGGCCCAAAAC+TGG + chr2.1:59724073-59724092 None:intergenic 55.0%
CCCTTCTGATACCATGGCCT+CGG + chr2.1:59724472-59724491 None:intergenic 55.0%
CCGAGGCCATGGTATCAGAA+GGG - chr2.1:59724469-59724488 MS.gene00083:intron 55.0%
CTCACCGTGTACTGGACATC+TGG + chr2.1:59724028-59724047 None:intergenic 55.0%
CTCGTTACCACCTCCTACCT+TGG + chr2.1:59725070-59725089 None:intergenic 55.0%
GAACCAGCCAATTCACCGGT+TGG + chr2.1:59726214-59726233 None:intergenic 55.0%
GAAGGGCCGAGAGCTAACAA+TGG - chr2.1:59724486-59724505 MS.gene00083:intron 55.0%
GATCCTAGTCCTAGGGCCTT+TGG + chr2.1:59724949-59724968 None:intergenic 55.0%
TACTGGTCCTCCCATTCACC+GGG + chr2.1:59723983-59724002 None:intergenic 55.0%
TCAACTCCTACCATGGCACC+AGG + chr2.1:59724207-59724226 None:intergenic 55.0%
TCCAGACGGACCAGTTGAAC+CGG + chr2.1:59726237-59726256 None:intergenic 55.0%
TCCGAGGCCATGGTATCAGA+AGG - chr2.1:59724468-59724487 MS.gene00083:intron 55.0%
TCTCGGCCCTTCTGATACCA+TGG + chr2.1:59724478-59724497 None:intergenic 55.0%
! GCGGCAGCATCTCCTTTTTG+TGG + chr2.1:59727484-59727503 None:intergenic 55.0%
! GGTGCCATGGTAGGAGTTGA+TGG - chr2.1:59724207-59724226 MS.gene00083:intron 55.0%
!! AGAAGCGCTGGCTCCAAACA+CGG + chr2.1:59724349-59724368 None:intergenic 55.0%
!! TTTCGAGGAGGTGCCAATGC+TGG + chr2.1:59727085-59727104 None:intergenic 55.0%
!!! TCTGTCCAGTTTTGGGCCTG+TGG - chr2.1:59724065-59724084 MS.gene00083:CDS 55.0%
AGGCCAAAGGCCCTAGGACT+AGG - chr2.1:59724943-59724962 MS.gene00083:intron 60.0%
CCAGACGGACCAGTTGAACC+GGG + chr2.1:59726236-59726255 None:intergenic 60.0%
CCGGGAACCAGCCAATTCAC+CGG + chr2.1:59726218-59726237 None:intergenic 60.0%
CGAATCACCCGGTGAATGGG+AGG - chr2.1:59723973-59723992 MS.gene00083:CDS 60.0%
GGCCGAGAGCTAACAATGGG+AGG - chr2.1:59724490-59724509 MS.gene00083:intron 60.0%
! CCGGTGAATTGGCTGGTTCC+CGG - chr2.1:59726215-59726234 MS.gene00083:CDS 60.0%
! TGGCTGGTTCCCGGTTCAAC+TGG - chr2.1:59726224-59726243 MS.gene00083:CDS 60.0%
CCCGGTTCAACTGGTCCGTC+TGG - chr2.1:59726233-59726252 MS.gene00083:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 59723529 59727525 59723529 ID=MS.gene00083
chr2.1 mRNA 59723529 59727525 59723529 ID=MS.gene00083.t1;Parent=MS.gene00083
chr2.1 exon 59727478 59727525 59727478 ID=MS.gene00083.t1.exon1;Parent=MS.gene00083.t1
chr2.1 CDS 59727478 59727525 59727478 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
chr2.1 exon 59727183 59727324 59727183 ID=MS.gene00083.t1.exon2;Parent=MS.gene00083.t1
chr2.1 CDS 59727183 59727324 59727183 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
chr2.1 exon 59727012 59727085 59727012 ID=MS.gene00083.t1.exon3;Parent=MS.gene00083.t1
chr2.1 CDS 59727012 59727085 59727012 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
chr2.1 exon 59726470 59726934 59726470 ID=MS.gene00083.t1.exon4;Parent=MS.gene00083.t1
chr2.1 CDS 59726470 59726934 59726470 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
chr2.1 exon 59725725 59726264 59725725 ID=MS.gene00083.t1.exon5;Parent=MS.gene00083.t1
chr2.1 CDS 59725725 59726264 59725725 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
chr2.1 exon 59725379 59725591 59725379 ID=MS.gene00083.t1.exon6;Parent=MS.gene00083.t1
chr2.1 CDS 59725379 59725591 59725379 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
chr2.1 exon 59723529 59724134 59723529 ID=MS.gene00083.t1.exon7;Parent=MS.gene00083.t1
chr2.1 CDS 59723529 59724134 59723529 ID=cds.MS.gene00083.t1;Parent=MS.gene00083.t1
Gene Sequence

>MS.gene00083

ATGGAAACGTATGATGTTTCTCAAGCTAGGAACCAGAATGCTTACTGGGTAATTTTTAATAAATTTTGTAATTTCTTGACTTCCGAACTTTGATATATCAATAGTTGTTTAATGGTTTGATTTTCTTTTTAATATAATGATTGTGTGTATTGAGGTTGTATGATAGTCGATAATGTGTGTAATTTTATCATTTTGGTTTAGGTTGAAGGGGCTGATATAAATTCACAGTTCACAAGCCCAAACTTTGAACAATCTGGAGTAATGAATAATGAAGGAGCCCCTGAATTTGTTGATCAGAGCATGTATTACCCTGCTTCCACCAATTATGGGTATTATTGTACAGGTAAATTTAAAATGCATTTGCAAGTTCTTTGGTTTTGGTGGTAACTGGTATTTTATGCATCATATTATATTAATGATTTATTATTTGGTGGATTTAGGATTCGAATCACCCGGTGAATGGGAGGACCAGTATAGGATTTTTGGTGTAGATGGTCCAGATGTCCAGTACACGGTGAGTCTGACTACTGTATCTCTCTGTCCAGTTTTGGGCCTGTGGCTGATATTAATGTGTTTTCTTCTTTATCTCAGGGTGGACAAGATGAAAGTTTTCCGTATGTATATTACAACTATGGATATGCACAGTCTCCATACAATCCATATAATCCGTATATACCTGGTGCCATGGTAGGAGTTGATGGCTCATATGGAGGAGAACAATCTTATTACACCCTCCCCAATTATCAAAACCCTGCTTCTTCACCTGCTTATGATCCCCTTGTTCAACTAGACAATTTTCCTGATAGTTCTGCAAACTCCGTGTTTGGAGCCAGCGCTTCTGTAAGCAGAAGTGATGGAAGAGGTTTGAAACAAAAGTTCAATGAAGCTTCTGGTAACTTTTCTAGGAACTCTTTAAAACTTTCAACAAATCAAACAAGTTCCGAGGCCATGGTATCAGAAGGGCCGAGAGCTAACAATGGGAGGAAGCAAGATTTGACACATGCAAATGTTTCTGGAAGCAGGTCTCTCAACGCAGCATCATCTGCTGTTCATCAGGTATAATTTTCCTCCTTTTGGATTACATTTGAATATAATTTTGTCCCGACTACTTCAGTCGCTGATTGAGAGTCAGCTGTTCTATGACTACGAGTGACGTTAGTTGCTACTATTACGATGTTGTGAACGCTATTTCTTTTGTAGGAGTGTATAGGTAGATCAGTAATGTATTAGTGGTTGATGGTTATGCTGTTCTGTTTTGCAGGATAGAAGAATTGATGCTTCAGTGCAACCTGTAGATACTATCTCTAATGGGAATGTTATTTCTCATCGTAATCAATTGATAGTAGCTTCTTCACGAAGTGGATTTTCTGATTTTGCAGCAAATGCTAATGGACAGTCTTCAGTTGCTAAGCTTAGGCCAAAGGCCCTAGGACTAGGATCAAGTGATGGAAATGTTAGTGCTGATGTATTGGGTGATCAAAATCGAGGCCCTAGGACTAGTAGATCAAAACATCAACTGTCTGTGAAAGCTTATACGACCAAGGTAGGAGGTGGTAACGAGCAAGACAACATCATCATTTATACCGACCAATACAACAAGGAGGATTTCCCTCTTGACTATGATAATGCAAAGTTTTTTGTTATAAAATCATACAGTGAGGATGATGTGCACAAAAGCATTAAATACAACGTGTGGTCTTCTACAGTTCATGGAAACAAGAAGTTGGGAAATGCTTATGAGGATACAAAGAAAGTATCAGCTGAAAAATCTGGAGTCTGTCCTATCTTTCTATTTTTTTCTGTAAGTTTGACGGTGTCTTAACTGAGATTTTTTTATGTTTTCTTTGTGTATCTAATATCTATTTGTAAGCTAATTAATGTCTGCTTTTCATACTGGATTTAATAATATTCTTCATCCTGTTTTTGTTATGCAGGTTAATGCTAGCGGTCAATTTTGTGGAGTTGCAGAGATGATTGGCTCTGTTGACTTTAATAAGGACATGGACTTTTGGCAGCAAGATAAATGGAGTGGAAGCTTTCCTGTTAAGTGGCATATCATAAAAGATGTTCCAAATCCAAATTTTAGGCACATCATACTAGAGAACAATGAAAACAAGCCAGTAACTAATAGCAGAGATACACAAGAGGTATTCATTATTTGTTGAAATATAAGAACACATCATAAATGTCTTGATATTATGTCTTTATCTCATAAGATTAGACTTTTCTAGTAGAGACCTCTAGGGCATGGTTCAATTGGTTCAATCATTGAACTAAATCCGTAAAAAATATTAGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCAAAGTTTTGTTTTTAGTCCCTACAAAATAAAATCACACTTTTTAGTCCTTGTGACATTTTCCTTAAGCATTTTAGGGACCAAAAATGTTGATGGAAATTTTTGACAGGGACTAAAAATGCTGATGAAATTTTTTTATAGGAATAAAAATGCTGATGGAAAATATTATAGGGATTAAAAAGTGTGATTTTATTTTATAGGGACTAAAAACAAAATTATGAATATTTACAGGGACCATTTACTTAATTAACCCAAAATATTAACAAGGTAAATTAGTAAAATCTAAAAATAGAAATCAGTTGTAGCAACTGTGATTCAATCCAGTTCAATCAGACTGCAGTACTATCGGGCTCAAACCAACCGGTGAATTGGCTGGTTCCCGGTTCAACTGGTCCGTCTGGACCAGTTTTCAAAACACAGCTATCAAGTTTATTATCAATATCAATCATGTTACGCCATGATTATATTATTTCTTTATTTTCCTTTTATCTAAAGCCCATAAATCCAACTGTTAATTCTGTTAAAGAGTTCTTTTATGAGATTTATATGTTAAAATTAGTCGTTGTAGGTAAAGTTTTTGCACTGAATTTGTTTGCTAAAATGATTATTTCCATTTCTTGAGTGTCTTATTCTGTTATATCAATTGCCGAGTTCTCCAATGATTCAATTGATTGGCTGAACCAATTAACATATGGTTGTTTGCTTGCCTGTTTGTGTTTGGTTAAGGTTTTAGCAGAGCTAATATGCTTGAAGAGAAAGCAATTGTATGAATTTAACTAGATGTTTGGTGGTTTACTAGGCCTACGTTAATCTTGATTTTGGATTTAGTTGATATTAGGATCTGGTTGTTGTTGCCATGGGTGTAGCAGTGCATCATAAATGATTACCGACATGAATTTATTTACTTGAACCAAGCGAACTGTTGATCAGTTTACCTTTTGGTTTTAATGTTGGATTAAACTAGTTGTTGTTTGTCTCTAGTAAATTTTGCTTATTATCGGTCATGGCTTTTTTTTCTCTACTTGATTTAGAATATCGTGTATTGAATGTTCTTGCTCGTGGCAGATAATGTATTCTAAAGGATTGGAAATGCTGAAAATATTCAAAAATCATACTTTGAAGACATCGTTGCTTGATGACTTCATGTATTATGAAAACCGTCAAAAGATCATGCACGATCAGAAAGCCAAGCTCCTAATCAGAAGTTTCAAAAGTCCAGTATTCATACCAGCATTGGCACCTCCTCGAAAGTTGAATATTGTTGTTGACAAACCACCCAGCAAGTATGAGAAGAATTCAAGGCTCAAGGATGATTCTAATAGCTTAAATCAGATGTCCATTTCAAATTCTGAGCAGAACATCCACAATTCTGATGTCCCAAACATCAAGTCTGTGAATGAGCAGGCTGAGAAAATTGCAGTTAAAGAAGATATCTCCTCTATCTTAAAGATAGGTTCAATTGCCATTAACCCGAAGCAGGTTGCAGCAAAACAATCTGGCATTGGTAGCCGAGAACAACTTGACATTCTTACAGTAGGCTCAGTGCCAGTTAAAGTTAATGGGTTAGCTGGCTCTTCTGGGTTCTTGAAAGTTGGCAGTATACAACTTGACCCAAAAGCATTACAACCACAAAAAGGAGATGCTGCCGCCAAAAGTAGTTTCCAAAAATAA
Protein sequence

>MS.gene00083.t1

METYDVSQARNQNAYWVEGADINSQFTSPNFEQSGVMNNEGAPEFVDQSMYYPASTNYGYYCTGFESPGEWEDQYRIFGVDGPDVQYTGGQDESFPYVYYNYGYAQSPYNPYNPYIPGAMVGVDGSYGGEQSYYTLPNYQNPASSPAYDPLVQLDNFPDSSANSVFGASASVSRSDGRGLKQKFNEASGNFSRNSLKLSTNQTSSEAMVSEGPRANNGRKQDLTHANVSGSRSLNAASSAVHQDRRIDASVQPVDTISNGNVISHRNQLIVASSRSGFSDFAANANGQSSVAKLRPKALGLGSSDGNVSADVLGDQNRGPRTSRSKHQLSVKAYTTKVGGGNEQDNIIIYTDQYNKEDFPLDYDNAKFFVIKSYSEDDVHKSIKYNVWSSTVHGNKKLGNAYEDTKKVSAEKSGVCPIFLFFSVNASGQFCGVAEMIGSVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNPNFRHIILENNENKPVTNSRDTQEIMYSKGLEMLKIFKNHTLKTSLLDDFMYYENRQKIMHDQKAKLLIRSFKSPVFIPALAPPRKLNIVVDKPPSKYEKNSRLKDDSNSLNQMSISNSEQNIHNSDVPNIKSVNEQAEKIAVKEDISSILKIGSIAINPKQVAAKQSGIGSREQLDILTVGSVPVKVNGLAGSSGFLKVGSIQLDPKALQPQKGDAAAKSSFQK