AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058307

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058307.t1 MTR_2g032660 96.264 696 23 3 1 695 1 694 0.0 1365
MS.gene058307.t1 MTR_4g123630 67.727 660 199 9 37 691 1 651 0.0 876
MS.gene058307.t1 MTR_2g063460 43.232 495 208 16 70 536 93 542 3.31e-103 327
MS.gene058307.t1 MTR_2g063460 43.232 495 208 16 70 536 95 544 4.56e-103 327
MS.gene058307.t1 MTR_4g005110 39.122 524 270 16 46 536 54 561 1.25e-93 304
MS.gene058307.t1 MTR_8g088390 58.921 241 85 3 306 536 286 522 8.86e-88 287
MS.gene058307.t1 MTR_8g088390 58.921 241 85 3 306 536 351 587 2.35e-87 288
MS.gene058307.t1 MTR_7g085500 49.301 286 125 4 261 536 319 594 2.79e-81 271
MS.gene058307.t1 MTR_6g032970 53.101 258 100 4 293 536 318 568 2.95e-79 266
MS.gene058307.t1 MTR_2g005840 61.579 190 73 0 347 536 232 421 3.31e-78 258
MS.gene058307.t1 MTR_2g005840 61.579 190 73 0 347 536 263 452 1.36e-77 258
MS.gene058307.t1 MTR_2g032070 81.609 87 3 1 1 87 1 74 3.00e-42 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058307.t1 AT1G48110 48.328 658 308 13 36 681 1 638 0.0 563
MS.gene058307.t1 AT1G48110 48.328 658 308 13 36 681 1 638 0.0 563
MS.gene058307.t1 AT3G17330 42.857 679 265 19 37 683 1 588 6.98e-155 461
MS.gene058307.t1 AT3G17330 42.857 679 265 19 37 683 1 588 6.98e-155 461
MS.gene058307.t1 AT3G17330 48.009 427 171 9 285 683 83 486 3.88e-121 371
MS.gene058307.t1 AT3G13460 39.523 587 273 22 15 536 39 608 7.89e-95 308
MS.gene058307.t1 AT3G13460 39.523 587 273 22 15 536 36 605 1.04e-94 307
MS.gene058307.t1 AT3G13460 39.523 587 273 22 15 536 38 607 1.33e-94 307
MS.gene058307.t1 AT1G79270 68.500 200 60 1 341 537 278 477 1.06e-92 297
MS.gene058307.t1 AT1G79270 68.500 200 60 1 341 537 278 477 1.06e-92 297
MS.gene058307.t1 AT1G79270 68.500 200 60 1 341 537 278 477 1.06e-92 297
MS.gene058307.t1 AT1G79270 68.500 200 60 1 341 537 293 492 1.88e-92 297
MS.gene058307.t1 AT3G13060 60.256 234 80 3 307 536 318 542 5.01e-89 291
MS.gene058307.t1 AT3G13060 60.256 234 80 3 307 536 318 542 5.01e-89 291
MS.gene058307.t1 AT3G13060 60.256 234 80 3 307 536 340 564 5.03e-89 291
MS.gene058307.t1 AT3G13060 60.256 234 80 3 307 536 330 554 6.52e-89 291
MS.gene058307.t1 AT1G55500 54.508 244 101 2 293 530 335 574 1.64e-83 276
MS.gene058307.t1 AT1G55500 54.508 244 101 2 293 530 279 518 1.98e-83 274
MS.gene058307.t1 AT1G55500 54.508 244 101 2 293 530 292 531 2.64e-83 274
MS.gene058307.t1 AT1G55500 54.508 244 101 2 293 530 335 574 2.64e-83 275
MS.gene058307.t1 AT1G55500 54.508 244 101 2 293 530 322 561 3.53e-83 275
MS.gene058307.t1 AT1G55500 54.508 244 101 2 293 530 335 574 4.05e-83 275
MS.gene058307.t1 AT5G61020 55.000 240 97 3 306 538 192 427 9.30e-83 271
MS.gene058307.t1 AT5G61020 55.000 240 97 3 306 538 194 429 1.14e-82 270
MS.gene058307.t1 AT5G58190 54.217 249 101 5 291 536 255 493 4.04e-80 265
MS.gene058307.t1 AT5G58190 54.217 249 101 5 291 536 254 492 4.91e-80 265
MS.gene058307.t1 AT3G03950 54.918 244 101 3 293 536 173 407 1.01e-78 258
MS.gene058307.t1 AT3G03950 54.918 244 101 3 293 536 174 408 1.20e-78 258
MS.gene058307.t1 AT3G03950 54.918 244 101 3 293 536 177 411 1.23e-78 258
MS.gene058307.t1 AT1G27960 53.947 228 83 3 311 536 215 422 7.98e-77 254
MS.gene058307.t1 AT1G09810 56.019 216 91 1 347 558 170 385 1.65e-76 252
MS.gene058307.t1 AT1G09810 56.019 216 91 1 347 558 212 427 2.29e-76 253
MS.gene058307.t1 AT1G27960 53.947 228 83 3 311 536 289 496 4.12e-76 254
MS.gene058307.t1 AT1G09810 56.019 216 91 1 347 558 193 408 4.38e-76 252
MS.gene058307.t1 AT3G13060 56.682 217 77 4 307 515 340 547 2.47e-71 242
MS.gene058307.t1 AT3G13460 33.263 475 235 22 15 424 39 496 3.00e-33 134
MS.gene058307.t1 AT3G13060 48.361 122 50 3 307 424 340 452 8.62e-24 105
MS.gene058307.t1 AT1G27960 45.299 117 42 3 311 425 289 385 2.60e-20 94.7
MS.gene058307.t1 AT4G11970 29.747 158 95 3 366 518 72 218 1.00e-14 77.0
MS.gene058307.t1 AT4G11970 29.747 158 95 3 366 518 72 218 1.41e-14 76.3
MS.gene058307.t1 AT4G11970 29.747 158 95 3 366 518 72 218 1.61e-14 76.6
MS.gene058307.t1 AT4G11970 29.747 158 95 3 366 518 72 218 6.83e-14 75.1
MS.gene058307.t1 AT4G11970 29.747 158 95 3 366 518 72 218 6.83e-14 75.1

Find 147 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGGTTAGCTGGCTCTTC+TGG 0.117523 2.2:-56045879 MS.gene058307:CDS
TACCCTGCTTCCACCAATTA+TGG 0.150443 2.2:-56049447 MS.gene058307:CDS
TTGACACATGCAAATGTTTC+TGG 0.179968 2.2:-56048760 MS.gene058307:CDS
AGTATGATGTGCCTAAAATT+TGG 0.182955 2.2:+56047677 None:intergenic
GTATCTCTGCTATTAGTTAC+TGG 0.212229 2.2:+56047635 None:intergenic
ACTCCAGATTGTTCAAAGTT+TGG 0.250796 2.2:+56049516 None:intergenic
TGAATTCTTCTCATACTTGC+TGG 0.263385 2.2:+56046160 None:intergenic
TGGCTCTGTTGACTTTAATA+AGG 0.265086 2.2:-56047777 MS.gene058307:CDS
TCAGTGCCAGTTAAAGTTAA+TGG 0.268987 2.2:-56045897 MS.gene058307:CDS
TGCAACCTGCTTCGGGTTAA+TGG 0.270209 2.2:+56045974 None:intergenic
GCTAACCCATTAACTTTAAC+TGG 0.275132 2.2:+56045891 None:intergenic
CCGTATGTATATTACAACTA+TGG 0.288528 2.2:-56049141 MS.gene058307:CDS
CTCCAGATTGTTCAAAGTTT+GGG 0.301535 2.2:+56049517 None:intergenic
TGTACAATAATACCCATAAT+TGG 0.317280 2.2:+56049434 None:intergenic
TTTATGATATGCCACTTAAC+AGG 0.319471 2.2:+56047713 None:intergenic
ATGGGTTAGCTGGCTCTTCT+GGG 0.325136 2.2:-56045878 MS.gene058307:CDS
CCAGGTATATACGGATTATA+TGG 0.326972 2.2:+56049096 None:intergenic
TCATTCACAGACTTGATGTT+TGG 0.330984 2.2:+56046059 None:intergenic
AAATTACCCAGTAAGCATTC+TGG 0.341971 2.2:+56049721 None:intergenic
CAAAAGTTCAATGAAGCTTC+TGG 0.348903 2.2:-56048883 MS.gene058307:CDS
GATCCTAGTCCTAGGGCCTT+TGG 0.349547 2.2:+56048335 None:intergenic
ATGCTCTGATCAACAAATTC+AGG 0.351771 2.2:+56049474 None:intergenic
CTAGGAACCAGAATGCTTAC+TGG 0.356092 2.2:-56049728 MS.gene058307:CDS
CCTGTAGATACTATCTCTAA+TGG 0.362924 2.2:-56048464 MS.gene058307:CDS
ATGTGCCTAAAATTTGGATT+TGG 0.363738 2.2:+56047683 None:intergenic
CTCGTTACCACCTCCTACCT+TGG 0.368057 2.2:+56048214 None:intergenic
AGTTCTGCAAACTCCGTGTT+TGG 0.378137 2.2:-56048949 MS.gene058307:CDS
TTAATAAGGACATGGACTTT+TGG 0.378991 2.2:-56047763 MS.gene058307:CDS
CATTCACAGACTTGATGTTT+GGG 0.382329 2.2:+56046060 None:intergenic
CAGTGCCAGTTAAAGTTAAT+GGG 0.383647 2.2:-56045896 MS.gene058307:CDS
ACCCTGCTTCCACCAATTAT+GGG 0.384468 2.2:-56049446 MS.gene058307:CDS
ACCATGGCACCAGGTATATA+CGG 0.392677 2.2:+56049087 None:intergenic
AAAGCATTACAACCACAAAA+AGG 0.392730 2.2:-56045822 MS.gene058307:CDS
GAAACTTCTGATTAGGAGCT+TGG 0.393810 2.2:+56046250 None:intergenic
ACGGAGTTTGCAGAACTATC+AGG 0.395503 2.2:+56048955 None:intergenic
TGAACCTATCTTTAAGATAG+AGG 0.398400 2.2:+56046001 None:intergenic
GCCAATGCTGGTATGAATAC+TGG 0.398898 2.2:+56046221 None:intergenic
GTGTGGTCTTCTACAGTTCA+TGG 0.411680 2.2:-56048062 MS.gene058307:CDS
TAAGAATGTCAAGTTGTTCT+CGG 0.421487 2.2:+56045928 None:intergenic
CATCACTTGATCCTAGTCCT+AGG 0.422765 2.2:+56048327 None:intergenic
AGCATCATCTGCTGTTCATC+AGG 0.423199 2.2:-56048719 MS.gene058307:intron
TACGGATTATATGGATTGTA+TGG 0.425791 2.2:+56049105 None:intergenic
GGAAATCCTCCTTGTTGTAT+TGG 0.428102 2.2:+56048165 None:intergenic
GAATTCTTCTCATACTTGCT+GGG 0.432505 2.2:+56046161 None:intergenic
CTCACCGTGTACTGGACATC+TGG 0.433997 2.2:+56049257 None:intergenic
TCTTCTGGGTTCTTGAAAGT+TGG 0.434025 2.2:-56045864 MS.gene058307:CDS
AGCCCAAACTTTGAACAATC+TGG 0.434855 2.2:-56049519 MS.gene058307:CDS
TACCCATAATTGGTGGAAGC+AGG 0.435738 2.2:+56049444 None:intergenic
GTAGGAGTTGATGGCTCATA+TGG 0.439213 2.2:-56049066 MS.gene058307:CDS
CTGTAGATACTATCTCTAAT+GGG 0.443517 2.2:-56048463 MS.gene058307:CDS
AAATGTTAGTGCTGATGTAT+TGG 0.445062 2.2:-56048303 MS.gene058307:CDS
GTTCTGCTCAGAATTTGAAA+TGG 0.453546 2.2:+56046100 None:intergenic
CCCTTCTGATACCATGGCCT+CGG 0.454290 2.2:+56048813 None:intergenic
GGTGCCATGGTAGGAGTTGA+TGG 0.455986 2.2:-56049075 MS.gene058307:CDS
GATAATGTATTCTAAAGGAT+TGG 0.459236 2.2:-56046372 MS.gene058307:CDS
TGTGGAGTTGCAGAGATGAT+TGG 0.464797 2.2:-56047797 MS.gene058307:CDS
AGGCCAAAGGCCCTAGGACT+AGG 0.465607 2.2:-56048338 MS.gene058307:CDS
GTTAAAGTTAATGGGTTAGC+TGG 0.467289 2.2:-56045888 MS.gene058307:CDS
GATTCGAATCACCCGGTGAA+TGG 0.467931 2.2:-56049313 MS.gene058307:CDS
TTCCTCCCATTGTTAGCTCT+CGG 0.469671 2.2:+56048790 None:intergenic
AATTATGGGTATTATTGTAC+AGG 0.476299 2.2:-56049432 MS.gene058307:intron
ATACTGGTCCTCCCATTCAC+CGG 0.477464 2.2:+56049301 None:intergenic
GCAAGTATGAGAAGAATTCA+AGG 0.480414 2.2:-56046157 MS.gene058307:CDS
AGTTCATGGAAACAAGAAGT+TGG 0.483158 2.2:-56048048 MS.gene058307:CDS
ATTCGAATCACCCGGTGAAT+GGG 0.484015 2.2:-56049312 MS.gene058307:CDS
TAGTCAGACTCACCGTGTAC+TGG 0.484610 2.2:+56049249 None:intergenic
CAGGTTGCAGCAAAACAATC+TGG 0.488120 2.2:-56045960 MS.gene058307:CDS
GTTCATGGAAACAAGAAGTT+GGG 0.488312 2.2:-56048047 MS.gene058307:CDS
TGCTCTGATCAACAAATTCA+GGG 0.491217 2.2:+56049475 None:intergenic
GTGGAAGCTTTCCTGTTAAG+TGG 0.491998 2.2:-56047724 MS.gene058307:CDS
ATCCTCCTTGTTGTATTGGT+CGG 0.502648 2.2:+56048169 None:intergenic
ACAACAATATTCAACTTTCG+AGG 0.503642 2.2:+56046194 None:intergenic
TCATAAGCAGGTGAAGAAGC+AGG 0.507178 2.2:+56049003 None:intergenic
AATGTTAGTGCTGATGTATT+GGG 0.510099 2.2:-56048302 MS.gene058307:CDS
ATCTCCTCTATCTTAAAGAT+AGG 0.511747 2.2:-56046005 MS.gene058307:CDS
TTTCGAGGAGGTGCCAATGC+TGG 0.512758 2.2:+56046209 None:intergenic
CCATATAATCCGTATATACC+TGG 0.512895 2.2:-56049096 MS.gene058307:CDS
GAAGTTGGGAAATGCTTATG+AGG 0.513881 2.2:-56048033 MS.gene058307:CDS
AATCGCCATTAACCCGAAGC+AGG 0.514583 2.2:-56045979 MS.gene058307:CDS
TCCAGTATTCATACCAGCAT+TGG 0.514740 2.2:-56046222 MS.gene058307:CDS
ATCACTTGATCCTAGTCCTA+GGG 0.516411 2.2:+56048328 None:intergenic
ATGCAAATGTTTCTGGAAGC+AGG 0.519305 2.2:-56048753 MS.gene058307:CDS
TCAAACAAGTTCCGAGGCCA+TGG 0.528567 2.2:-56048824 MS.gene058307:CDS
CCATTAGAGATAGTATCTAC+AGG 0.528741 2.2:+56048464 None:intergenic
ATAGTAGCTTCTTCACGAAG+TGG 0.535163 2.2:-56048413 MS.gene058307:CDS
TGGCAGATAATGTATTCTAA+AGG 0.535367 2.2:-56046377 MS.gene058307:intron
ACCCATAATTGGTGGAAGCA+GGG 0.538655 2.2:+56049445 None:intergenic
GTGAATGGGAGGACCAGTAT+AGG 0.542108 2.2:-56049298 MS.gene058307:CDS
CAACTTGACATTCTTACAGT+AGG 0.545279 2.2:-56045921 MS.gene058307:CDS
TCTGGAGTAATGAATAATGA+AGG 0.545782 2.2:-56049501 MS.gene058307:CDS
CATCAAGTCTGTGAATGAGC+AGG 0.551415 2.2:-56046054 MS.gene058307:CDS
AGTCTTCAGTTGCTAAGCTT+AGG 0.552338 2.2:-56048358 MS.gene058307:CDS
AGTTGCTAAGCTTAGGCCAA+AGG 0.552702 2.2:-56048351 MS.gene058307:CDS
AAGGGCCGAGAGCTAACAAT+GGG 0.557060 2.2:-56048795 MS.gene058307:CDS
TCTCGGCCCTTCTGATACCA+TGG 0.560650 2.2:+56048807 None:intergenic
CCATAGTTGTAATATACATA+CGG 0.561725 2.2:+56049141 None:intergenic
CGTATGATGTTTCTCAAGCT+AGG 0.561789 2.2:-56049746 MS.gene058307:CDS
ACTTCTGCTTACAGAAGCGC+TGG 0.562983 2.2:+56048924 None:intergenic
TGAGAAGAATTCAAGGCTCA+AGG 0.565493 2.2:-56046150 MS.gene058307:CDS
TCCGTATATACCTGGTGCCA+TGG 0.566479 2.2:-56049088 MS.gene058307:CDS
TACTGGTCCTCCCATTCACC+GGG 0.566938 2.2:+56049302 None:intergenic
TGTTTGGGACATCAGAATTG+TGG 0.568309 2.2:+56046075 None:intergenic
TCCGAGGCCATGGTATCAGA+AGG 0.568894 2.2:-56048814 MS.gene058307:CDS
TGAACAAGGGGATCATAAGC+AGG 0.570873 2.2:+56048991 None:intergenic
GCAGCAAAACAATCTGGCAT+TGG 0.571218 2.2:-56045954 MS.gene058307:CDS
ACAATAATACCCATAATTGG+TGG 0.572117 2.2:+56049437 None:intergenic
AAGCTTAGGCCAAAGGCCCT+AGG 0.576887 2.2:-56048344 MS.gene058307:CDS
TATATACCTGGTGCCATGGT+AGG 0.577950 2.2:-56049084 MS.gene058307:CDS
GTGATCAAAATCGAGGCCCT+AGG 0.582768 2.2:-56048280 MS.gene058307:CDS
TTGCATTATCATAGTCAAGA+GGG 0.582783 2.2:+56048144 None:intergenic
GTAAGCAGAAGTGATGGAAG+AGG 0.583085 2.2:-56048913 MS.gene058307:CDS
TTCTTCTCATACTTGCTGGG+TGG 0.584664 2.2:+56046164 None:intergenic
TTTGCATTATCATAGTCAAG+AGG 0.589581 2.2:+56048143 None:intergenic
AAAGCTTATACGACCAAGGT+AGG 0.595919 2.2:-56048227 MS.gene058307:CDS
TAGGAACCAGAATGCTTACT+GGG 0.603432 2.2:-56049727 MS.gene058307:intron
AAAATTGTCTAGTTGAACAA+GGG 0.608179 2.2:+56048978 None:intergenic
CGAATCACCCGGTGAATGGG+AGG 0.610737 2.2:-56049309 MS.gene058307:CDS
GTTGATGGCTCATATGGAGG+AGG 0.610742 2.2:-56049060 MS.gene058307:CDS
TGTTGACTTTAATAAGGACA+TGG 0.611375 2.2:-56047771 MS.gene058307:CDS
GAAAATTGTCTAGTTGAACA+AGG 0.611684 2.2:+56048977 None:intergenic
GATTTAGGATTCGAATCACC+CGG 0.616404 2.2:-56049320 MS.gene058307:intron
AACAAATCAAACAAGTTCCG+AGG 0.617188 2.2:-56048830 MS.gene058307:CDS
TGAGCCATCAACTCCTACCA+TGG 0.618664 2.2:+56049071 None:intergenic
GTTATGCAGGTTAATGCTAG+CGG 0.619200 2.2:-56047827 MS.gene058307:intron
TCAACTCCTACCATGGCACC+AGG 0.621665 2.2:+56049078 None:intergenic
GCTTATACGACCAAGGTAGG+AGG 0.628706 2.2:-56048224 MS.gene058307:CDS
AGAAGCGCTGGCTCCAAACA+CGG 0.629135 2.2:+56048936 None:intergenic
GGCCGAGAGCTAACAATGGG+AGG 0.631197 2.2:-56048792 MS.gene058307:CDS
TATACGACCAAGGTAGGAGG+TGG 0.632143 2.2:-56048221 MS.gene058307:CDS
TGGCAGCAAGATAAATGGAG+TGG 0.637215 2.2:-56047743 MS.gene058307:CDS
AAATTGTCTAGTTGAACAAG+GGG 0.637347 2.2:+56048979 None:intergenic
CATAAGCAGGTGAAGAAGCA+GGG 0.637644 2.2:+56049004 None:intergenic
AAAGCATTAAATACAACGTG+TGG 0.642188 2.2:-56048079 MS.gene058307:CDS
GGAGTTGATGGCTCATATGG+AGG 0.645378 2.2:-56049063 MS.gene058307:CDS
TGGTCCAGATGTCCAGTACA+CGG 0.651143 2.2:-56049261 MS.gene058307:intron
GCTTCTGTAAGCAGAAGTGA+TGG 0.655628 2.2:-56048919 MS.gene058307:CDS
CTAGGACTAGGATCAAGTGA+TGG 0.656294 2.2:-56048326 MS.gene058307:CDS
ACAATATTCAACTTTCGAGG+AGG 0.668248 2.2:+56046197 None:intergenic
CCGAGGCCATGGTATCAGAA+GGG 0.669836 2.2:-56048813 MS.gene058307:CDS
GAAGGGCCGAGAGCTAACAA+TGG 0.669968 2.2:-56048796 MS.gene058307:CDS
TGTTATAAAATCATACAGTG+AGG 0.670580 2.2:-56048114 MS.gene058307:CDS
TGTGAAAGCTTATACGACCA+AGG 0.673356 2.2:-56048231 MS.gene058307:CDS
GCTCTGATCAACAAATTCAG+GGG 0.687027 2.2:+56049476 None:intergenic
TAATAGCAGAGATACACAAG+AGG 0.687410 2.2:-56047627 MS.gene058307:intron
GTATTGGGTGATCAAAATCG+AGG 0.696890 2.2:-56048287 MS.gene058307:CDS
TACCGACCAATACAACAAGG+AGG 0.733388 2.2:-56048171 MS.gene058307:CDS
TTATACCGACCAATACAACA+AGG 0.761173 2.2:-56048174 MS.gene058307:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAACTTTGAATATTTAT+AGG + chr2.2:56048107-56048126 None:intergenic 15.0%
!! ACAAAATTATGAATATTTAC+AGG - chr2.2:56048324-56048343 MS.gene058307:CDS 15.0%
!! ATTAATGATTTATTATTTGG+TGG - chr2.2:56046199-56046218 MS.gene058307:CDS 15.0%
!! CAAAACTTTGAATATTTATA+GGG + chr2.2:56048106-56048125 None:intergenic 15.0%
!! CAAAATTATGAATATTTACA+GGG - chr2.2:56048325-56048344 MS.gene058307:CDS 15.0%
!! TAAATCCGTAAAAAATATTA+GGG - chr2.2:56048063-56048082 MS.gene058307:CDS 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG - chr2.2:56048293-56048312 MS.gene058307:CDS 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG - chr2.2:56048294-56048313 MS.gene058307:CDS 15.0%
!!! AATTTACCTTGTTAATATTT+TGG + chr2.2:56048369-56048388 None:intergenic 15.0%
!!! ATTAACCCTAATATTTTTTA+CGG + chr2.2:56048071-56048090 None:intergenic 15.0%
!!! ATTTACCTTGTTAATATTTT+GGG + chr2.2:56048368-56048387 None:intergenic 15.0%
!!! TAATTTTATCATTTTGGTTT+AGG - chr2.2:56045967-56045986 MS.gene058307:CDS 15.0%
!!! TAGTAAATTTTGCTTATTAT+CGG - chr2.2:56049083-56049102 MS.gene058307:CDS 15.0%
!! ACAGAAAAAAATAGAAAGAT+AGG + chr2.2:56047572-56047591 None:intergenic 20.0%
!! ACTATTGATATATCAAAGTT+CGG + chr2.2:56045873-56045892 None:intergenic 20.0%
!! ATTAACCCAAAATATTAACA+AGG - chr2.2:56048360-56048379 MS.gene058307:CDS 20.0%
!! CTAAATCCGTAAAAAATATT+AGG - chr2.2:56048062-56048081 MS.gene058307:CDS 20.0%
!! TATGAATTTAACTAGATGTT+TGG - chr2.2:56048870-56048889 MS.gene058307:CDS 20.0%
!! TATTCAAATGTAATCCAAAA+AGG + chr2.2:56046860-56046879 None:intergenic 20.0%
!! TCAAGTAAATAAATTCATGT+CGG + chr2.2:56048994-56049013 None:intergenic 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + chr2.2:56048198-56048217 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr2.2:56048138-56048157 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr2.2:56048137-56048156 None:intergenic 20.0%
!!! ATTTATTATTTGGTGGATTT+AGG - chr2.2:56046206-56046225 MS.gene058307:CDS 20.0%
!!! ATTTTTTTCTGTAAGTTTGA+CGG - chr2.2:56047580-56047599 MS.gene058307:intron 20.0%
!!! TGTGTGTAATTTTATCATTT+TGG - chr2.2:56045961-56045980 MS.gene058307:CDS 20.0%
!!! TTATTTTTGGAAACTACTTT+TGG + chr2.2:56049756-56049775 None:intergenic 20.0%
!!! TTTTGGATTTAGTTGATATT+AGG - chr2.2:56048921-56048940 MS.gene058307:CDS 20.0%
!!! TTTTGGGTTAATTAAGTAAA+TGG + chr2.2:56048352-56048371 None:intergenic 20.0%
! AAAATTGTCTAGTTGAACAA+GGG + chr2.2:56046566-56046585 None:intergenic 25.0%
! AATCCAACATTAAAACCAAA+AGG + chr2.2:56049042-56049061 None:intergenic 25.0%
! AATTATGGGTATTATTGTAC+AGG - chr2.2:56046109-56046128 MS.gene058307:CDS 25.0%
! AGAATTAACAGTTGGATTTA+TGG + chr2.2:56048605-56048624 None:intergenic 25.0%
! ATGCTGATGGAAAATATTAT+AGG - chr2.2:56048264-56048283 MS.gene058307:CDS 25.0%
! ATGTTAAAATTAGTCGTTGT+AGG - chr2.2:56048651-56048670 MS.gene058307:intron 25.0%
! CCATAGTTGTAATATACATA+CGG + chr2.2:56046403-56046422 None:intergenic 25.0%
! GAATTAACAGTTGGATTTAT+GGG + chr2.2:56048604-56048623 None:intergenic 25.0%
! TATAATGATTGTGTGTATTG+AGG - chr2.2:56045920-56045939 MS.gene058307:CDS 25.0%
! TATAGGAATAAAAATGCTGA+TGG - chr2.2:56048251-56048270 MS.gene058307:CDS 25.0%
! TCCAAAATCAAGATTAAAGT+AGG + chr2.2:56048908-56048927 None:intergenic 25.0%
! TGCTGATGGAAAATATTATA+GGG - chr2.2:56048265-56048284 MS.gene058307:CDS 25.0%
! TGTACAATAATACCCATAAT+TGG + chr2.2:56046110-56046129 None:intergenic 25.0%
! TGTTATAAAATCATACAGTG+AGG - chr2.2:56047427-56047446 MS.gene058307:intron 25.0%
!! AAAGTATTAGCTGAAAAATC+TGG - chr2.2:56047539-56047558 MS.gene058307:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr2.2:56048170-56048189 MS.gene058307:CDS 25.0%
!! ATGTTCCAAATCCAAATTTT+AGG - chr2.2:56047853-56047872 MS.gene058307:intron 25.0%
!! ATTTAGTTGATATTAGGATC+TGG - chr2.2:56048927-56048946 MS.gene058307:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr2.2:56048171-56048190 MS.gene058307:CDS 25.0%
!! GATAATGTATTCTAAAGGAT+TGG - chr2.2:56049169-56049188 MS.gene058307:intron 25.0%
!!! ATTTATGGGCTTTAGATAAA+AGG + chr2.2:56048590-56048609 None:intergenic 25.0%
!!! TGCTGATGGAAATTTTTTAT+AGG - chr2.2:56048234-56048253 MS.gene058307:CDS 25.0%
!!! TTACCTTTTGGTTTTAATGT+TGG - chr2.2:56049036-56049055 MS.gene058307:CDS 25.0%
AAATGCATTTGCAAGTTCTT+TGG - chr2.2:56046140-56046159 MS.gene058307:CDS 30.0%
AAATTGTCTAGTTGAACAAG+GGG + chr2.2:56046565-56046584 None:intergenic 30.0%
AATTGAATCATTGGAGAACT+CGG + chr2.2:56048754-56048773 None:intergenic 30.0%
ACAACAATATTCAACTTTCG+AGG + chr2.2:56049350-56049369 None:intergenic 30.0%
ACAATAATACCCATAATTGG+TGG + chr2.2:56046107-56046126 None:intergenic 30.0%
AGAATAAGACACTCAAGAAA+TGG + chr2.2:56048718-56048737 None:intergenic 30.0%
AGTAATGTATTAGTGGTTGA+TGG - chr2.2:56047006-56047025 MS.gene058307:intron 30.0%
AGTATGATGTGCCTAAAATT+TGG + chr2.2:56047867-56047886 None:intergenic 30.0%
ATCTCCTCTATCTTAAAGAT+AGG - chr2.2:56049536-56049555 MS.gene058307:CDS 30.0%
ATGTGCCTAAAATTTGGATT+TGG + chr2.2:56047861-56047880 None:intergenic 30.0%
CCGTATGTATATTACAACTA+TGG - chr2.2:56046400-56046419 MS.gene058307:intron 30.0%
CTCTTAACAGAATTAACAGT+TGG + chr2.2:56048613-56048632 None:intergenic 30.0%
CTGTAGATACTATCTCTAAT+GGG - chr2.2:56047078-56047097 MS.gene058307:intron 30.0%
GAAAATTGTCTAGTTGAACA+AGG + chr2.2:56046567-56046586 None:intergenic 30.0%
GAATTTAACTAGATGTTTGG+TGG - chr2.2:56048873-56048892 MS.gene058307:CDS 30.0%
GTAGATCAGTAATGTATTAG+TGG - chr2.2:56046999-56047018 MS.gene058307:intron 30.0%
TCAAATGTAATCCAAAAAGG+AGG + chr2.2:56046857-56046876 None:intergenic 30.0%
TCTCCAATGATTCAATTGAT+TGG - chr2.2:56048757-56048776 MS.gene058307:CDS 30.0%
TGGCAGATAATGTATTCTAA+AGG - chr2.2:56049164-56049183 MS.gene058307:CDS 30.0%
TTAACCTGCATAACAAAAAC+AGG + chr2.2:56047708-56047727 None:intergenic 30.0%
TTGCATTATCATAGTCAAGA+GGG + chr2.2:56047400-56047419 None:intergenic 30.0%
TTTGCATTATCATAGTCAAG+AGG + chr2.2:56047401-56047420 None:intergenic 30.0%
! AAAGCATTAAATACAACGTG+TGG - chr2.2:56047462-56047481 MS.gene058307:intron 30.0%
! AAAGCATTACAACCACAAAA+AGG - chr2.2:56049719-56049738 MS.gene058307:intron 30.0%
! ATTTTGCTTATTATCGGTCA+TGG - chr2.2:56049089-56049108 MS.gene058307:CDS 30.0%
! GCCTACTTTAATCTTGATTT+TGG - chr2.2:56048904-56048923 MS.gene058307:CDS 30.0%
! GGTATAATTTTCCTCCTTTT+TGG - chr2.2:56046843-56046862 MS.gene058307:intron 30.0%
! GTGTTTTCTTCTTTATCTCA+GGG - chr2.2:56046358-56046377 MS.gene058307:CDS 30.0%
! TAAGAATGTCAAGTTGTTCT+CGG + chr2.2:56049616-56049635 None:intergenic 30.0%
! TACGGATTATATGGATTGTA+TGG + chr2.2:56046439-56046458 None:intergenic 30.0%
! TCTGGAGTAATGAATAATGA+AGG - chr2.2:56046040-56046059 MS.gene058307:CDS 30.0%
! TGTGTTTTCTTCTTTATCTC+AGG - chr2.2:56046357-56046376 MS.gene058307:CDS 30.0%
! TTAATAAGGACATGGACTTT+TGG - chr2.2:56047778-56047797 MS.gene058307:CDS 30.0%
! TTTATGATATGCCACTTAAC+AGG + chr2.2:56047831-56047850 None:intergenic 30.0%
! TTTGTGGTTGTAATGCTTTT+GGG + chr2.2:56049718-56049737 None:intergenic 30.0%
! TTTTGTGGTTGTAATGCTTT+TGG + chr2.2:56049719-56049738 None:intergenic 30.0%
!! AAATGTTAGTGCTGATGTAT+TGG - chr2.2:56047238-56047257 MS.gene058307:intron 30.0%
!! AATGTTAGTGCTGATGTATT+GGG - chr2.2:56047239-56047258 MS.gene058307:intron 30.0%
!! ATTTGCAAGTTCTTTGGTTT+TGG - chr2.2:56046146-56046165 MS.gene058307:CDS 30.0%
!! GTTGATGGAAATTTTTGACA+GGG - chr2.2:56048203-56048222 MS.gene058307:CDS 30.0%
!! TGAACCTATCTTTAAGATAG+AGG + chr2.2:56049543-56049562 None:intergenic 30.0%
!! TGTTGACTTTAATAAGGACA+TGG - chr2.2:56047770-56047789 MS.gene058307:CDS 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG - chr2.2:56048202-56048221 MS.gene058307:CDS 30.0%
!! TTAATGTCTGCTTTTCATAC+TGG - chr2.2:56047663-56047682 MS.gene058307:CDS 30.0%
!! TTTCTTTTGTAGGAGTGTAT+AGG - chr2.2:56046977-56046996 MS.gene058307:intron 30.0%
!! TTTTTGGAAACTACTTTTGG+CGG + chr2.2:56049753-56049772 None:intergenic 30.0%
!!! ATCATTTTGGTTTAGGTTGA+AGG - chr2.2:56045974-56045993 MS.gene058307:CDS 30.0%
!!! GACTTTTGAAACTTCTGATT+AGG + chr2.2:56049301-56049320 None:intergenic 30.0%
!!! TATAGGATTTTTGGTGTAGA+TGG - chr2.2:56046260-56046279 MS.gene058307:CDS 30.0%
!!! TCATTTTGGTTTAGGTTGAA+GGG - chr2.2:56045975-56045994 MS.gene058307:CDS 30.0%
AAACTGATCAACAGTTCACT+TGG + chr2.2:56049018-56049037 None:intergenic 35.0%
AAATCAGACTGCAGTACTAT+CGG - chr2.2:56048432-56048451 MS.gene058307:CDS 35.0%
AAATTACCCAGTAAGCATTC+TGG + chr2.2:56045823-56045842 None:intergenic 35.0%
AACAAATCAAACAAGTTCCG+AGG - chr2.2:56046711-56046730 MS.gene058307:intron 35.0%
AACACATTAATATCAGCCAC+AGG + chr2.2:56046343-56046362 None:intergenic 35.0%
AACCTTAACCAAACACAAAC+AGG + chr2.2:56048814-56048833 None:intergenic 35.0%
ACAATATTCAACTTTCGAGG+AGG + chr2.2:56049347-56049366 None:intergenic 35.0%
ACTCCAGATTGTTCAAAGTT+TGG + chr2.2:56046028-56046047 None:intergenic 35.0%
AGTTCATGGAAACAAGAAGT+TGG - chr2.2:56047493-56047512 MS.gene058307:intron 35.0%
ATGCTCTGATCAACAAATTC+AGG + chr2.2:56046070-56046089 None:intergenic 35.0%
CAAAAGTTCAATGAAGCTTC+TGG - chr2.2:56046658-56046677 MS.gene058307:intron 35.0%
CAACTTGACATTCTTACAGT+AGG - chr2.2:56049620-56049639 MS.gene058307:intron 35.0%
CAGCCAATCAATTGAATCAT+TGG + chr2.2:56048763-56048782 None:intergenic 35.0%
CAGTGCCAGTTAAAGTTAAT+GGG - chr2.2:56049645-56049664 MS.gene058307:intron 35.0%
CATTCACAGACTTGATGTTT+GGG + chr2.2:56049484-56049503 None:intergenic 35.0%
CCATATAATCCGTATATACC+TGG - chr2.2:56046445-56046464 MS.gene058307:intron 35.0%
CCATTAGAGATAGTATCTAC+AGG + chr2.2:56047080-56047099 None:intergenic 35.0%
CCTGTAGATACTATCTCTAA+TGG - chr2.2:56047077-56047096 MS.gene058307:intron 35.0%
CTACACCAAAAATCCTATAC+TGG + chr2.2:56046259-56046278 None:intergenic 35.0%
CTCCAGATTGTTCAAAGTTT+GGG + chr2.2:56046027-56046046 None:intergenic 35.0%
GAATTCTTCTCATACTTGCT+GGG + chr2.2:56049383-56049402 None:intergenic 35.0%
GCAAACAACCATGTGTTAAT+TGG + chr2.2:56048788-56048807 None:intergenic 35.0%
GCAAGTATGAGAAGAATTCA+AGG - chr2.2:56049384-56049403 MS.gene058307:intron 35.0%
GCTAACCCATTAACTTTAAC+TGG + chr2.2:56049653-56049672 None:intergenic 35.0%
GTATCTCTGCTATTAGTTAC+TGG + chr2.2:56047909-56047928 None:intergenic 35.0%
GTTCATGGAAACAAGAAGTT+GGG - chr2.2:56047494-56047513 MS.gene058307:intron 35.0%
GTTCTGCTCAGAATTTGAAA+TGG + chr2.2:56049444-56049463 None:intergenic 35.0%
TAATAGCAGAGATACACAAG+AGG - chr2.2:56047914-56047933 MS.gene058307:intron 35.0%
TCAGTGCCAGTTAAAGTTAA+TGG - chr2.2:56049644-56049663 MS.gene058307:intron 35.0%
TCATTCACAGACTTGATGTT+TGG + chr2.2:56049485-56049504 None:intergenic 35.0%
TGAATTCTTCTCATACTTGC+TGG + chr2.2:56049384-56049403 None:intergenic 35.0%
TGCTCTGATCAACAAATTCA+GGG + chr2.2:56046069-56046088 None:intergenic 35.0%
TGCTTAAGGAAAATGTCACA+AGG + chr2.2:56048166-56048185 None:intergenic 35.0%
TTAGGGACCAAAAATGTTGA+TGG - chr2.2:56048188-56048207 MS.gene058307:CDS 35.0%
TTATACCGACCAATACAACA+AGG - chr2.2:56047367-56047386 MS.gene058307:intron 35.0%
TTGACACATGCAAATGTTTC+TGG - chr2.2:56046781-56046800 MS.gene058307:intron 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr2.2:56048180-56048199 None:intergenic 35.0%
! AAGCTTCTGGTAACTTTTCT+AGG - chr2.2:56046671-56046690 MS.gene058307:intron 35.0%
! ACTTTTGGCAGCAAGATAAA+TGG - chr2.2:56047793-56047812 MS.gene058307:CDS 35.0%
! CCAGGTATATACGGATTATA+TGG + chr2.2:56046448-56046467 None:intergenic 35.0%
! CTGTTGATCAGTTTACCTTT+TGG - chr2.2:56049024-56049043 MS.gene058307:CDS 35.0%
! GATTTTGCAGCAAATGCTAA+TGG - chr2.2:56047158-56047177 MS.gene058307:intron 35.0%
! TAGATGTTTGGTGGTTTACT+AGG - chr2.2:56048882-56048901 MS.gene058307:CDS 35.0%
! TTTTCTTCTTTATCTCAGGG+TGG - chr2.2:56046361-56046380 MS.gene058307:CDS 35.0%
!! AAGCAGGGTTTTGATAATTG+GGG + chr2.2:56046525-56046544 None:intergenic 35.0%
!! AGAAGCAGGGTTTTGATAAT+TGG + chr2.2:56046527-56046546 None:intergenic 35.0%
!! GAAGCAGGGTTTTGATAATT+GGG + chr2.2:56046526-56046545 None:intergenic 35.0%
!! GTTAAAGTTAATGGGTTAGC+TGG - chr2.2:56049653-56049672 MS.gene058307:intron 35.0%
!! GTTTTGATCTACTAGTCCTA+GGG + chr2.2:56047280-56047299 None:intergenic 35.0%
!! TGGCTCTGTTGACTTTAATA+AGG - chr2.2:56047764-56047783 MS.gene058307:CDS 35.0%
!! TTTTCTAGTAGAGACCTCTA+GGG - chr2.2:56048012-56048031 MS.gene058307:CDS 35.0%
!!! CATTTTGGTTTAGGTTGAAG+GGG - chr2.2:56045976-56045995 MS.gene058307:CDS 35.0%
!!! GATAGCTGTGTTTTGAAAAC+TGG + chr2.2:56048511-56048530 None:intergenic 35.0%
!!! GTGAACGCTATTTCTTTTGT+AGG - chr2.2:56046967-56046986 MS.gene058307:intron 35.0%
!!! TCATCCTGTTTTTGTTATGC+AGG - chr2.2:56047701-56047720 MS.gene058307:CDS 35.0%
!!! TGTTTTGATCTACTAGTCCT+AGG + chr2.2:56047281-56047300 None:intergenic 35.0%
AAAGCTTATACGACCAAGGT+AGG - chr2.2:56047314-56047333 MS.gene058307:intron 40.0%
AATCAGACTGCAGTACTATC+GGG - chr2.2:56048433-56048452 MS.gene058307:CDS 40.0%
ACAGGGACTAAAAATGCTGA+TGG - chr2.2:56048220-56048239 MS.gene058307:CDS 40.0%
AGCCCAAACTTTGAACAATC+TGG - chr2.2:56046022-56046041 MS.gene058307:CDS 40.0%
AGTCTTCAGTTGCTAAGCTT+AGG - chr2.2:56047183-56047202 MS.gene058307:intron 40.0%
ATAGTAGCTTCTTCACGAAG+TGG - chr2.2:56047128-56047147 MS.gene058307:intron 40.0%
ATCACTTGATCCTAGTCCTA+GGG + chr2.2:56047216-56047235 None:intergenic 40.0%
CGTATGATGTTTCTCAAGCT+AGG - chr2.2:56045795-56045814 MS.gene058307:CDS 40.0%
GAAACTTCTGATTAGGAGCT+TGG + chr2.2:56049294-56049313 None:intergenic 40.0%
GAAGTTGGGAAATGCTTATG+AGG - chr2.2:56047508-56047527 MS.gene058307:intron 40.0%
GCTCTGATCAACAAATTCAG+GGG + chr2.2:56046068-56046087 None:intergenic 40.0%
GTATTGAATGTTCTTGCTCG+TGG - chr2.2:56049144-56049163 MS.gene058307:CDS 40.0%
GTATTGGGTGATCAAAATCG+AGG - chr2.2:56047254-56047273 MS.gene058307:intron 40.0%
GTTATGCAGGTTAATGCTAG+CGG - chr2.2:56047714-56047733 MS.gene058307:CDS 40.0%
TAGGAACCAGAATGCTTACT+GGG - chr2.2:56045814-56045833 MS.gene058307:CDS 40.0%
TCCAGTATTCATACCAGCAT+TGG - chr2.2:56049319-56049338 MS.gene058307:intron 40.0%
TCTTCTGGGTTCTTGAAAGT+TGG - chr2.2:56049677-56049696 MS.gene058307:intron 40.0%
TGAGAAGAATTCAAGGCTCA+AGG - chr2.2:56049391-56049410 MS.gene058307:intron 40.0%
TGCCTGTTTGTGTTTGGTTA+AGG - chr2.2:56048809-56048828 MS.gene058307:CDS 40.0%
TGGCTGAACCAATTAACACA+TGG - chr2.2:56048777-56048796 MS.gene058307:CDS 40.0%
TGTGAAAGCTTATACGACCA+AGG - chr2.2:56047310-56047329 MS.gene058307:intron 40.0%
TTTGCTTGCCTGTTTGTGTT+TGG - chr2.2:56048803-56048822 MS.gene058307:CDS 40.0%
! AATGCTAGCGGTCAATTTTG+TGG - chr2.2:56047726-56047745 MS.gene058307:CDS 40.0%
! ATCCTCCTTGTTGTATTGGT+CGG + chr2.2:56047375-56047394 None:intergenic 40.0%
! GAGGACCAGTATAGGATTTT+TGG - chr2.2:56046251-56046270 MS.gene058307:CDS 40.0%
! GATCGTGCATGATCTTTTGA+CGG + chr2.2:56049265-56049284 None:intergenic 40.0%
! GATTTAGGATTCGAATCACC+CGG - chr2.2:56046221-56046240 MS.gene058307:CDS 40.0%
! GGAAATCCTCCTTGTTGTAT+TGG + chr2.2:56047379-56047398 None:intergenic 40.0%
! GTATCTCTCTGTCCAGTTTT+GGG - chr2.2:56046317-56046336 MS.gene058307:CDS 40.0%
! GTTATGCTGTTCTGTTTTGC+AGG - chr2.2:56047028-56047047 MS.gene058307:intron 40.0%
! TGTATCTCTCTGTCCAGTTT+TGG - chr2.2:56046316-56046335 MS.gene058307:CDS 40.0%
! TGTTTGGGACATCAGAATTG+TGG + chr2.2:56049469-56049488 None:intergenic 40.0%
!! AGGGTTTTGATAATTGGGGA+GGG + chr2.2:56046521-56046540 None:intergenic 40.0%
!! ATGCAAATGTTTCTGGAAGC+AGG - chr2.2:56046788-56046807 MS.gene058307:intron 40.0%
!! CTTTTCTAGTAGAGACCTCT+AGG - chr2.2:56048011-56048030 MS.gene058307:CDS 40.0%
!!! GTTTTGAAAACTGGTCCAGA+CGG + chr2.2:56048502-56048521 None:intergenic 40.0%
!!! TCTTTGGTTTTGGTGGTAAC+TGG - chr2.2:56046156-56046175 MS.gene058307:CDS 40.0%
!!! TGCAAGTTCTTTGGTTTTGG+TGG - chr2.2:56046149-56046168 MS.gene058307:CDS 40.0%
AATCAGCGACTGAAGTAGTC+GGG + chr2.2:56046892-56046911 None:intergenic 45.0%
ACCATGGCACCAGGTATATA+CGG + chr2.2:56046457-56046476 None:intergenic 45.0%
ACCCATAATTGGTGGAAGCA+GGG + chr2.2:56046099-56046118 None:intergenic 45.0%
ACCCTGCTTCCACCAATTAT+GGG - chr2.2:56046095-56046114 MS.gene058307:CDS 45.0%
ACGGAGTTTGCAGAACTATC+AGG + chr2.2:56046589-56046608 None:intergenic 45.0%
AGCATCATCTGCTGTTCATC+AGG - chr2.2:56046822-56046841 MS.gene058307:intron 45.0%
AGTTCTGCAAACTCCGTGTT+TGG - chr2.2:56046592-56046611 MS.gene058307:intron 45.0%
AGTTGCTAAGCTTAGGCCAA+AGG - chr2.2:56047190-56047209 MS.gene058307:intron 45.0%
ATTCGAATCACCCGGTGAAT+GGG - chr2.2:56046229-56046248 MS.gene058307:CDS 45.0%
CAATCAGCGACTGAAGTAGT+CGG + chr2.2:56046893-56046912 None:intergenic 45.0%
CAGGTTGCAGCAAAACAATC+TGG - chr2.2:56049581-56049600 MS.gene058307:intron 45.0%
CATAAGCAGGTGAAGAAGCA+GGG + chr2.2:56046540-56046559 None:intergenic 45.0%
CATCAAGTCTGTGAATGAGC+AGG - chr2.2:56049487-56049506 MS.gene058307:CDS 45.0%
CATCACTTGATCCTAGTCCT+AGG + chr2.2:56047217-56047236 None:intergenic 45.0%
CTAGGAACCAGAATGCTTAC+TGG - chr2.2:56045813-56045832 MS.gene058307:CDS 45.0%
CTAGGACTAGGATCAAGTGA+TGG - chr2.2:56047215-56047234 MS.gene058307:intron 45.0%
GCAGCAAAACAATCTGGCAT+TGG - chr2.2:56049587-56049606 MS.gene058307:intron 45.0%
GCCAATGCTGGTATGAATAC+TGG + chr2.2:56049323-56049342 None:intergenic 45.0%
GCTTCTGTAAGCAGAAGTGA+TGG - chr2.2:56046622-56046641 MS.gene058307:intron 45.0%
GTGGAAGCTTTCCTGTTAAG+TGG - chr2.2:56047817-56047836 MS.gene058307:CDS 45.0%
GTGTGGTCTTCTACAGTTCA+TGG - chr2.2:56047479-56047498 MS.gene058307:intron 45.0%
TACCCATAATTGGTGGAAGC+AGG + chr2.2:56046100-56046119 None:intergenic 45.0%
TACCCTGCTTCCACCAATTA+TGG - chr2.2:56046094-56046113 MS.gene058307:CDS 45.0%
TACCGACCAATACAACAAGG+AGG - chr2.2:56047370-56047389 MS.gene058307:intron 45.0%
TCATAAGCAGGTGAAGAAGC+AGG + chr2.2:56046541-56046560 None:intergenic 45.0%
TGAACAAGGGGATCATAAGC+AGG + chr2.2:56046553-56046572 None:intergenic 45.0%
TGGCAGCAAGATAAATGGAG+TGG - chr2.2:56047798-56047817 MS.gene058307:CDS 45.0%
TGTGGAGTTGCAGAGATGAT+TGG - chr2.2:56047744-56047763 MS.gene058307:CDS 45.0%
! GATCTGGTTGTTGTTGCCAT+GGG - chr2.2:56048943-56048962 MS.gene058307:CDS 45.0%
! GTAAGCAGAAGTGATGGAAG+AGG - chr2.2:56046628-56046647 MS.gene058307:intron 45.0%
! TGTTTTGCTGCAACCTGCTT+CGG + chr2.2:56049578-56049597 None:intergenic 45.0%
! TTCCTCCCATTGTTAGCTCT+CGG + chr2.2:56046754-56046773 None:intergenic 45.0%
! TTCTTCTCATACTTGCTGGG+TGG + chr2.2:56049380-56049399 None:intergenic 45.0%
!! CAGGGTTTTGATAATTGGGG+AGG + chr2.2:56046522-56046541 None:intergenic 45.0%
!! GTAGGAGTTGATGGCTCATA+TGG - chr2.2:56046475-56046494 MS.gene058307:intron 45.0%
!! TATATACCTGGTGCCATGGT+AGG - chr2.2:56046457-56046476 MS.gene058307:intron 45.0%
!! ATAAAAAAATAATATAATCA+TGG + chr2.2:56048564-56048583 None:intergenic 5.0%
!! TATATTAATGATTTATTATT+TGG - chr2.2:56046196-56046215 MS.gene058307:CDS 5.0%
AAACCAACCGGTGAATTGGC+TGG - chr2.2:56048459-56048478 MS.gene058307:CDS 50.0%
AAGGGCCGAGAGCTAACAAT+GGG - chr2.2:56046746-56046765 MS.gene058307:intron 50.0%
AATCGCCATTAACCCGAAGC+AGG - chr2.2:56049562-56049581 MS.gene058307:intron 50.0%
ACTATCGGGCTCAAACCAAC+CGG - chr2.2:56048447-56048466 MS.gene058307:CDS 50.0%
ATACTGGTCCTCCCATTCAC+CGG + chr2.2:56046243-56046262 None:intergenic 50.0%
ATGATGCACTGCTACACCCA+TGG + chr2.2:56048962-56048981 None:intergenic 50.0%
CCAATTGAACCATGCCCTAG+AGG + chr2.2:56048029-56048048 None:intergenic 50.0%
GATTCGAATCACCCGGTGAA+TGG - chr2.2:56046228-56046247 MS.gene058307:CDS 50.0%
GCTCAAACCAACCGGTGAAT+TGG - chr2.2:56048455-56048474 MS.gene058307:CDS 50.0%
GCTTATACGACCAAGGTAGG+AGG - chr2.2:56047317-56047336 MS.gene058307:intron 50.0%
GTGAATGGGAGGACCAGTAT+AGG - chr2.2:56046243-56046262 MS.gene058307:CDS 50.0%
GTGATCAAAATCGAGGCCCT+AGG - chr2.2:56047261-56047280 MS.gene058307:intron 50.0%
TAGTCAGACTCACCGTGTAC+TGG + chr2.2:56046295-56046314 None:intergenic 50.0%
TATACGACCAAGGTAGGAGG+TGG - chr2.2:56047320-56047339 MS.gene058307:intron 50.0%
TCAAACAAGTTCCGAGGCCA+TGG - chr2.2:56046717-56046736 MS.gene058307:intron 50.0%
TGAGCCATCAACTCCTACCA+TGG + chr2.2:56046473-56046492 None:intergenic 50.0%
TGGTCCAGATGTCCAGTACA+CGG - chr2.2:56046280-56046299 MS.gene058307:CDS 50.0%
! ACTTCTGCTTACAGAAGCGC+TGG + chr2.2:56046620-56046639 None:intergenic 50.0%
! GGATCTGGTTGTTGTTGCCA+TGG - chr2.2:56048942-56048961 MS.gene058307:CDS 50.0%
! GTTTTGCTGCAACCTGCTTC+GGG + chr2.2:56049577-56049596 None:intergenic 50.0%
! TCCGTATATACCTGGTGCCA+TGG - chr2.2:56046453-56046472 MS.gene058307:intron 50.0%
! TGCAACCTGCTTCGGGTTAA+TGG + chr2.2:56049570-56049589 None:intergenic 50.0%
!! AATGGGTTAGCTGGCTCTTC+TGG - chr2.2:56049662-56049681 MS.gene058307:intron 50.0%
!! ATGGGTTAGCTGGCTCTTCT+GGG - chr2.2:56049663-56049682 MS.gene058307:intron 50.0%
!! CCTCTAGGGCATGGTTCAAT+TGG - chr2.2:56048026-56048045 MS.gene058307:CDS 50.0%
!! GGAGTTGATGGCTCATATGG+AGG - chr2.2:56046478-56046497 MS.gene058307:intron 50.0%
!! GTTGATGGCTCATATGGAGG+AGG - chr2.2:56046481-56046500 MS.gene058307:intron 50.0%
!! TAGTAGAGACCTCTAGGGCA+TGG - chr2.2:56048017-56048036 MS.gene058307:CDS 50.0%
AAGCTTAGGCCAAAGGCCCT+AGG - chr2.2:56047197-56047216 MS.gene058307:intron 55.0%
ATCAGCCACAGGCCCAAAAC+TGG + chr2.2:56046332-56046351 None:intergenic 55.0%
CCCTTCTGATACCATGGCCT+CGG + chr2.2:56046731-56046750 None:intergenic 55.0%
CCGAGGCCATGGTATCAGAA+GGG - chr2.2:56046728-56046747 MS.gene058307:intron 55.0%
CTCACCGTGTACTGGACATC+TGG + chr2.2:56046287-56046306 None:intergenic 55.0%
CTCGTTACCACCTCCTACCT+TGG + chr2.2:56047330-56047349 None:intergenic 55.0%
GAACCAGCCAATTCACCGGT+TGG + chr2.2:56048465-56048484 None:intergenic 55.0%
GAAGGGCCGAGAGCTAACAA+TGG - chr2.2:56046745-56046764 MS.gene058307:intron 55.0%
GATCCTAGTCCTAGGGCCTT+TGG + chr2.2:56047209-56047228 None:intergenic 55.0%
TACTGGTCCTCCCATTCACC+GGG + chr2.2:56046242-56046261 None:intergenic 55.0%
TCAACTCCTACCATGGCACC+AGG + chr2.2:56046466-56046485 None:intergenic 55.0%
TCCAGACGGACCAGTTGAAC+CGG + chr2.2:56048488-56048507 None:intergenic 55.0%
TCCGAGGCCATGGTATCAGA+AGG - chr2.2:56046727-56046746 MS.gene058307:intron 55.0%
TCTCGGCCCTTCTGATACCA+TGG + chr2.2:56046737-56046756 None:intergenic 55.0%
! GCGGCAGCATCTCCTTTTTG+TGG + chr2.2:56049734-56049753 None:intergenic 55.0%
! GGTGCCATGGTAGGAGTTGA+TGG - chr2.2:56046466-56046485 MS.gene058307:intron 55.0%
!! AGAAGCGCTGGCTCCAAACA+CGG + chr2.2:56046608-56046627 None:intergenic 55.0%
!! TTTCGAGGAGGTGCCAATGC+TGG + chr2.2:56049335-56049354 None:intergenic 55.0%
!!! TCTGTCCAGTTTTGGGCCTG+TGG - chr2.2:56046324-56046343 MS.gene058307:CDS 55.0%
AGGCCAAAGGCCCTAGGACT+AGG - chr2.2:56047203-56047222 MS.gene058307:intron 60.0%
CCAGACGGACCAGTTGAACC+GGG + chr2.2:56048487-56048506 None:intergenic 60.0%
CCGGGAACCAGCCAATTCAC+CGG + chr2.2:56048469-56048488 None:intergenic 60.0%
CGAATCACCCGGTGAATGGG+AGG - chr2.2:56046232-56046251 MS.gene058307:CDS 60.0%
GGCCGAGAGCTAACAATGGG+AGG - chr2.2:56046749-56046768 MS.gene058307:intron 60.0%
! CCGGTGAATTGGCTGGTTCC+CGG - chr2.2:56048466-56048485 MS.gene058307:CDS 60.0%
! TGGCTGGTTCCCGGTTCAAC+TGG - chr2.2:56048475-56048494 MS.gene058307:CDS 60.0%
CCCGGTTCAACTGGTCCGTC+TGG - chr2.2:56048484-56048503 MS.gene058307:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 56045788 56049775 56045788 ID=MS.gene058307
chr2.2 mRNA 56045788 56049775 56045788 ID=MS.gene058307.t1;Parent=MS.gene058307
chr2.2 exon 56049728 56049775 56049728 ID=MS.gene058307.t1.exon1;Parent=MS.gene058307.t1
chr2.2 CDS 56049728 56049775 56049728 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
chr2.2 exon 56049433 56049574 56049433 ID=MS.gene058307.t1.exon2;Parent=MS.gene058307.t1
chr2.2 CDS 56049433 56049574 56049433 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
chr2.2 exon 56049262 56049335 56049262 ID=MS.gene058307.t1.exon3;Parent=MS.gene058307.t1
chr2.2 CDS 56049262 56049335 56049262 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
chr2.2 exon 56048720 56049184 56048720 ID=MS.gene058307.t1.exon4;Parent=MS.gene058307.t1
chr2.2 CDS 56048720 56049184 56048720 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
chr2.2 exon 56047974 56048513 56047974 ID=MS.gene058307.t1.exon5;Parent=MS.gene058307.t1
chr2.2 CDS 56047974 56048513 56047974 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
chr2.2 exon 56047628 56047840 56047628 ID=MS.gene058307.t1.exon6;Parent=MS.gene058307.t1
chr2.2 CDS 56047628 56047840 56047628 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
chr2.2 exon 56045788 56046393 56045788 ID=MS.gene058307.t1.exon7;Parent=MS.gene058307.t1
chr2.2 CDS 56045788 56046393 56045788 ID=cds.MS.gene058307.t1;Parent=MS.gene058307.t1
Gene Sequence

>MS.gene058307

ATGGAAACGTATGATGTTTCTCAAGCTAGGAACCAGAATGCTTACTGGGTAATTTATAATAAATTTTGTAATTTCTTGACTTCCGAACTTTGATATATCAATAGTTGTTTAATGATTTGATTTTCTTTTTAATATAATGATTGTGTGTATTGAGGTTGTATGATAGTCGATAATGTGTGTAATTTTATCATTTTGGTTTAGGTTGAAGGGGCTGATATAAATTCACAGTTCACAAGCCCAAACTTTGAACAATCTGGAGTAATGAATAATGAAGGAGCCCCTGAATTTGTTGATCAGAGCATGTATTACCCTGCTTCCACCAATTATGGGTATTATTGTACAGGTAAATTTAAAATGCATTTGCAAGTTCTTTGGTTTTGGTGGTAACTGGTATTTTATGCATCATATTATATTAATGATTTATTATTTGGTGGATTTAGGATTCGAATCACCCGGTGAATGGGAGGACCAGTATAGGATTTTTGGTGTAGATGGTCCAGATGTCCAGTACACGGTGAGTCTGACTACTGTATCTCTCTGTCCAGTTTTGGGCCTGTGGCTGATATTAATGTGTTTTCTTCTTTATCTCAGGGTGGACAAGATGAAAGTTTTCCGTATGTATATTACAACTATGGATATGCACAGTCTCCATACAATCCATATAATCCGTATATACCTGGTGCCATGGTAGGAGTTGATGGCTCATATGGAGGAGGACAATCTTATTACACCCTCCCCAATTATCAAAACCCTGCTTCTTCACCTGCTTATGATCCCCTTGTTCAACTAGACAATTTTCCTGATAGTTCTGCAAACTCCGTGTTTGGAGCCAGCGCTTCTGTAAGCAGAAGTGATGGAAGAGGTTTGAAACAAAAGTTCAATGAAGCTTCTGGTAACTTTTCTAGGAACTCTTTAAAACTTTCAACAAATCAAACAAGTTCCGAGGCCATGGTATCAGAAGGGCCGAGAGCTAACAATGGGAGGAAGCAAGATTTGACACATGCAAATGTTTCTGGAAGCAGGTCTCTCAACGCAGCATCATCTGCTGTTCATCAGGTATAATTTTCCTCCTTTTTGGATTACATTTGAATATAATTTTGTCCCGACTACTTCAGTCGCTGATTGAGAGTCAGCTGTTCTATGACTACGAGTGACGTTAGTTGCTACTATTACGATGTTGTGAACGCTATTTCTTTTGTAGGAGTGTATAGGTAGATCAGTAATGTATTAGTGGTTGATGGTTATGCTGTTCTGTTTTGCAGGATAGAAGAATTGATGCTTCAGTGCAACCTGTAGATACTATCTCTAATGGGAATGTTATTTCTCATCGTAATCAATTGATAGTAGCTTCTTCACGAAGTGGATTTTCTGATTTTGCAGCAAATGCTAATGGACAGTCTTCAGTTGCTAAGCTTAGGCCAAAGGCCCTAGGACTAGGATCAAGTGATGGAAATGTTAGTGCTGATGTATTGGGTGATCAAAATCGAGGCCCTAGGACTAGTAGATCAAAACATCAACTATCTGTGAAAGCTTATACGACCAAGGTAGGAGGTGGTAACGAGCAAGACAACATCATCATTTATACCGACCAATACAACAAGGAGGATTTCCCTCTTGACTATGATAATGCAAAGTTTTTTGTTATAAAATCATACAGTGAGGATGATGTGCACAAAAGCATTAAATACAACGTGTGGTCTTCTACAGTTCATGGAAACAAGAAGTTGGGAAATGCTTATGAGGATACAAAGAAAGTATTAGCTGAAAAATCTGGAGTCTGTCCTATCTTTCTATTTTTTTCTGTAAGTTTGACGGTGTCTTAACTGAGATTTTTTTATGTTTTCTTTGTGTATCTAATATCTATTTGTAAGCTAATTAATGTCTGCTTTTCATACTGGATTTAATAATATTCTTCATCCTGTTTTTGTTATGCAGGTTAATGCTAGCGGTCAATTTTGTGGAGTTGCAGAGATGATTGGCTCTGTTGACTTTAATAAGGACATGGACTTTTGGCAGCAAGATAAATGGAGTGGAAGCTTTCCTGTTAAGTGGCATATCATAAAAGATGTTCCAAATCCAAATTTTAGGCACATCATACTAGAGAACAATGAAAACAAGCCAGTAACTAATAGCAGAGATACACAAGAGGTATTCATTATTTGTTGAAATATAAGAACACATCATAAATGTCTTGATATTATGTCTTTATCTCGTAAGATTAGACTTTTCTAGTAGAGACCTCTAGGGCATGGTTCAATTGGTTCAATCATTGAACTAAATCCGTAAAAAATATTAGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCAAAGTTTTGTTTTTAGTCCCTACAAAATAAAATCACACTTTTTAGTCCTTGTGACATTTTCCTTAAGCATTTTAGGGACCAAAAATGTTGATGGAAATTTTTGACAGGGACTAAAAATGCTGATGGAAATTTTTTATAGGAATAAAAATGCTGATGGAAAATATTATAGGGATTAAAAAGTGTGATTTTATTTTATAGGGACTAAAAACAAAATTATGAATATTTACAGGGACCATTTACTTAATTAACCCAAAATATTAACAAGGTAAATTAGTAAAATCTAAAAATAGAAATCAGTTGTAGCAACTGTGATTCAAATCAGACTGCAGTACTATCGGGCTCAAACCAACCGGTGAATTGGCTGGTTCCCGGTTCAACTGGTCCGTCTGGACCAGTTTTCAAAACACAGCTATCAAGTTTATTATCAATATCAATCATGTTACGCCATGATTATATTATTTTTTTATTTTCCTTTTATCTAAAGCCCATAAATCCAACTGTTAATTCTGTTAAGAGTTCTTTTATGAGATTTATATGTTAAAATTAGTCGTTGTAGGTAAAGTTTTTGCACTGAATTTGTTTGCTAAAATGATTATTTCCATTTCTTGAGTGTCTTATTCTGTTATATCAATTTCCGAGTTCTCCAATGATTCAATTGATTGGCTGAACCAATTAACACATGGTTGTTTGCTTGCCTGTTTGTGTTTGGTTAAGGTTTTAGCAGAGCTAATATGCTTGAAGAGAAAGCAATTGTATGAATTTAACTAGATGTTTGGTGGTTTACTAGGCCTACTTTAATCTTGATTTTGGATTTAGTTGATATTAGGATCTGGTTGTTGTTGCCATGGGTGTAGCAGTGCATCATAAATGATTACCGACATGAATTTATTTACTTGAACCAAGTGAACTGTTGATCAGTTTACCTTTTGGTTTTAATGTTGGATTAAACTAGTTGTTGTTTGTCTCTAGTAAATTTTGCTTATTATCGGTCATGGCTTTTTTTTCTCTACTTGATTTAGAATATCGCGTATTGAATGTTCTTGCTCGTGGCAGATAATGTATTCTAAAGGATTGGAAATGCTGAAAATATTCAAAAATCATACTTTGAAGACATCGTTGCTTGATGACTTCATGTATTATGAAAACCGTCAAAAGATCATGCACGATCAGAAAGCCAAGCTCCTAATCAGAAGTTTCAAAAGTCCAGTATTCATACCAGCATTGGCACCTCCTCGAAAGTTGAATATTGTTGTTGACAAACCACCCAGCAAGTATGAGAAGAATTCAAGGCTCAAGGATGATTCTAATAGCTTAAATCAGATGTCCATTTCAAATTCTGAGCAGAACATCCACAATTCTGATGTCCCAAACATCAAGTCTGTGAATGAGCAGGCTGAGAAAATTGCAGTTAAAGAAGATATCTCCTCTATCTTAAAGATAGGTTCAATCGCCATTAACCCGAAGCAGGTTGCAGCAAAACAATCTGGCATTGGTAGCCGAGAACAACTTGACATTCTTACAGTAGGCTCAGTGCCAGTTAAAGTTAATGGGTTAGCTGGCTCTTCTGGGTTCTTGAAAGTTGGCAGTATACAACTTGACCCAAAAGCATTACAACCACAAAAAGGAGATGCTGCCGCCAAAAGTAGTTTCCAAAAATAA
Protein sequence

>MS.gene058307.t1

METYDVSQARNQNAYWVEGADINSQFTSPNFEQSGVMNNEGAPEFVDQSMYYPASTNYGYYCTGFESPGEWEDQYRIFGVDGPDVQYTGGQDESFPYVYYNYGYAQSPYNPYNPYIPGAMVGVDGSYGGGQSYYTLPNYQNPASSPAYDPLVQLDNFPDSSANSVFGASASVSRSDGRGLKQKFNEASGNFSRNSLKLSTNQTSSEAMVSEGPRANNGRKQDLTHANVSGSRSLNAASSAVHQDRRIDASVQPVDTISNGNVISHRNQLIVASSRSGFSDFAANANGQSSVAKLRPKALGLGSSDGNVSADVLGDQNRGPRTSRSKHQLSVKAYTTKVGGGNEQDNIIIYTDQYNKEDFPLDYDNAKFFVIKSYSEDDVHKSIKYNVWSSTVHGNKKLGNAYEDTKKVLAEKSGVCPIFLFFSVNASGQFCGVAEMIGSVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNPNFRHIILENNENKPVTNSRDTQEIMYSKGLEMLKIFKNHTLKTSLLDDFMYYENRQKIMHDQKAKLLIRSFKSPVFIPALAPPRKLNIVVDKPPSKYEKNSRLKDDSNSLNQMSISNSEQNIHNSDVPNIKSVNEQAEKIAVKEDISSILKIGSIAINPKQVAAKQSGIGSREQLDILTVGSVPVKVNGLAGSSGFLKVGSIQLDPKALQPQKGDAAAKSSFQK