Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68609.t1 | XP_003609844.1 | 97.4 | 652 | 16 | 1 | 1 | 652 | 1 | 651 | 0.00E+00 | 1213.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68609.t1 | Q9LJE5 | 37.5 | 557 | 278 | 15 | 7 | 503 | 62 | 608 | 2.4e-76 | 288.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68609.t1 | G7JQ12 | 97.4 | 652 | 16 | 1 | 1 | 652 | 1 | 651 | 0.0e+00 | 1213.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052161 | MS.gene68609 | 0.854898 | 9.06E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68609 | MS.gene90387 | PPI |
| MS.gene68609 | MS.gene071541 | PPI |
| MS.gene68609 | MS.gene60934 | PPI |
| MS.gene68609 | MS.gene90429 | PPI |
| MS.gene68609 | MS.gene071540 | PPI |
| MS.gene68609 | MS.gene071539 | PPI |
| MS.gene68609 | MS.gene90428 | PPI |
| MS.gene68609 | MS.gene90430 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68609.t1 | MTR_4g123630 | 97.393 | 652 | 16 | 1 | 1 | 652 | 1 | 651 | 0.0 | 1310 |
| MS.gene68609.t1 | MTR_2g032660 | 66.263 | 661 | 207 | 12 | 1 | 652 | 37 | 690 | 0.0 | 846 |
| MS.gene68609.t1 | MTR_4g005110 | 41.996 | 531 | 247 | 19 | 11 | 503 | 54 | 561 | 2.24e-100 | 320 |
| MS.gene68609.t1 | MTR_2g063460 | 42.268 | 485 | 235 | 13 | 35 | 506 | 95 | 547 | 9.66e-99 | 314 |
| MS.gene68609.t1 | MTR_2g063460 | 42.268 | 485 | 235 | 13 | 35 | 506 | 93 | 545 | 1.04e-98 | 314 |
| MS.gene68609.t1 | MTR_8g088390 | 58.974 | 234 | 81 | 4 | 281 | 503 | 293 | 522 | 3.27e-84 | 276 |
| MS.gene68609.t1 | MTR_8g088390 | 58.974 | 234 | 81 | 4 | 281 | 503 | 358 | 587 | 6.23e-84 | 278 |
| MS.gene68609.t1 | MTR_7g085500 | 48.505 | 301 | 118 | 7 | 224 | 503 | 310 | 594 | 3.58e-80 | 267 |
| MS.gene68609.t1 | MTR_2g005840 | 62.434 | 189 | 71 | 0 | 315 | 503 | 233 | 421 | 3.28e-79 | 260 |
| MS.gene68609.t1 | MTR_2g005840 | 62.434 | 189 | 71 | 0 | 315 | 503 | 264 | 452 | 9.92e-79 | 259 |
| MS.gene68609.t1 | MTR_6g032970 | 54.167 | 240 | 84 | 3 | 281 | 503 | 338 | 568 | 3.85e-77 | 259 |
| MS.gene68609.t1 | MTR_2g032070 | 72.340 | 47 | 13 | 0 | 6 | 52 | 28 | 74 | 9.81e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68609.t1 | AT1G48110 | 49.112 | 676 | 265 | 18 | 4 | 642 | 5 | 638 | 0.0 | 566 |
| MS.gene68609.t1 | AT1G48110 | 49.112 | 676 | 265 | 18 | 4 | 642 | 5 | 638 | 0.0 | 566 |
| MS.gene68609.t1 | AT3G17330 | 44.344 | 663 | 262 | 17 | 1 | 636 | 1 | 583 | 2.39e-163 | 481 |
| MS.gene68609.t1 | AT3G17330 | 44.344 | 663 | 262 | 17 | 1 | 636 | 1 | 583 | 2.39e-163 | 481 |
| MS.gene68609.t1 | AT3G17330 | 42.644 | 537 | 223 | 14 | 126 | 636 | 4 | 481 | 3.40e-116 | 357 |
| MS.gene68609.t1 | AT3G13460 | 58.996 | 239 | 82 | 3 | 281 | 507 | 375 | 609 | 5.82e-90 | 293 |
| MS.gene68609.t1 | AT3G13460 | 58.996 | 239 | 82 | 3 | 281 | 507 | 377 | 611 | 6.57e-90 | 293 |
| MS.gene68609.t1 | AT3G13460 | 58.996 | 239 | 82 | 3 | 281 | 507 | 378 | 612 | 6.72e-90 | 293 |
| MS.gene68609.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 282 | 477 | 3.49e-89 | 287 |
| MS.gene68609.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 282 | 477 | 3.49e-89 | 287 |
| MS.gene68609.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 282 | 477 | 3.49e-89 | 287 |
| MS.gene68609.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 345 | 564 | 5.74e-89 | 290 |
| MS.gene68609.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 335 | 554 | 6.72e-89 | 290 |
| MS.gene68609.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 323 | 542 | 6.72e-89 | 289 |
| MS.gene68609.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 323 | 542 | 6.72e-89 | 289 |
| MS.gene68609.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 297 | 492 | 6.83e-89 | 287 |
| MS.gene68609.t1 | AT5G61020 | 55.365 | 233 | 92 | 3 | 281 | 505 | 199 | 427 | 9.21e-83 | 270 |
| MS.gene68609.t1 | AT5G61020 | 55.365 | 233 | 92 | 3 | 281 | 505 | 201 | 429 | 9.72e-83 | 270 |
| MS.gene68609.t1 | AT5G58190 | 56.054 | 223 | 90 | 3 | 285 | 503 | 275 | 493 | 1.60e-77 | 257 |
| MS.gene68609.t1 | AT5G58190 | 56.054 | 223 | 90 | 3 | 285 | 503 | 274 | 492 | 1.80e-77 | 256 |
| MS.gene68609.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 195 | 411 | 5.60e-76 | 249 |
| MS.gene68609.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 191 | 407 | 5.62e-76 | 249 |
| MS.gene68609.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 192 | 408 | 7.36e-76 | 249 |
| MS.gene68609.t1 | AT1G27960 | 53.744 | 227 | 82 | 3 | 280 | 503 | 216 | 422 | 1.87e-75 | 249 |
| MS.gene68609.t1 | AT1G27960 | 53.744 | 227 | 82 | 3 | 280 | 503 | 290 | 496 | 7.48e-75 | 250 |
| MS.gene68609.t1 | AT1G09810 | 61.979 | 192 | 73 | 0 | 310 | 501 | 166 | 357 | 2.26e-74 | 245 |
| MS.gene68609.t1 | AT1G09810 | 62.567 | 187 | 70 | 0 | 315 | 501 | 213 | 399 | 2.47e-74 | 246 |
| MS.gene68609.t1 | AT1G09810 | 61.979 | 192 | 73 | 0 | 310 | 501 | 189 | 380 | 3.21e-74 | 246 |
| MS.gene68609.t1 | AT3G13060 | 59.184 | 196 | 76 | 1 | 280 | 475 | 345 | 536 | 2.09e-70 | 238 |
| MS.gene68609.t1 | AT3G13460 | 55.285 | 123 | 39 | 3 | 281 | 391 | 378 | 496 | 1.51e-30 | 126 |
| MS.gene68609.t1 | AT3G13060 | 49.107 | 112 | 53 | 1 | 280 | 391 | 345 | 452 | 1.19e-24 | 108 |
| MS.gene68609.t1 | AT1G27960 | 45.690 | 116 | 40 | 3 | 280 | 392 | 290 | 385 | 1.35e-19 | 92.4 |
| MS.gene68609.t1 | AT4G11970 | 29.282 | 181 | 100 | 4 | 322 | 485 | 49 | 218 | 2.20e-15 | 79.0 |
| MS.gene68609.t1 | AT4G11970 | 29.282 | 181 | 100 | 4 | 322 | 485 | 49 | 218 | 2.61e-15 | 78.6 |
| MS.gene68609.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 3.53e-15 | 78.2 |
| MS.gene68609.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 1.70e-14 | 76.6 |
| MS.gene68609.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 1.70e-14 | 76.6 |
Find 147 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCGGCTGTTAGTTAC+AGG | 0.207434 | 8.1:-7750008 | None:intergenic |
| TTTATCATGTGCCACTTTAC+AGG | 0.241019 | 8.1:-7749930 | None:intergenic |
| TAGAAGCGGTGATGTATTAT+TGG | 0.272352 | 8.1:+7749369 | MS.gene68609:CDS |
| GACTATGGATCTAATGCTAA+TGG | 0.294071 | 8.1:+7749289 | MS.gene68609:CDS |
| ATCATAGCACCTGGAATATA+AGG | 0.296402 | 8.1:-7748283 | None:intergenic |
| TTGATAGGCAGATGATGTTT+TGG | 0.299423 | 8.1:-7749424 | None:intergenic |
| TACCCTGCTCCCACCAATTA+CGG | 0.302628 | 8.1:+7747883 | MS.gene68609:CDS |
| TGTACAATAAAACCCGTAAT+TGG | 0.304533 | 8.1:-7747896 | None:intergenic |
| TCAATTGGTTCTGTATTAGA+TGG | 0.309724 | 8.1:-7750891 | None:intergenic |
| TTGCCTGCCTGTAGAGATCT+TGG | 0.313418 | 8.1:-7751002 | None:intergenic |
| TTAGCAATTTCATTGTCAAT+AGG | 0.315116 | 8.1:-7749526 | None:intergenic |
| AGAAAAGCTACTGGAAAATC+TGG | 0.315736 | 8.1:+7749667 | MS.gene68609:CDS |
| GTATATTACACACCTAACTA+TGG | 0.315879 | 8.1:+7748229 | MS.gene68609:CDS |
| ATCTCCTGACTTTGCTGTAT+AGG | 0.335846 | 8.1:-7749449 | None:intergenic |
| GTTTCGTCTCTACCTGTCTT+GGG | 0.344280 | 8.1:-7750869 | None:intergenic |
| TTTATACTGATCAATATAAC+AGG | 0.344509 | 8.1:+7749494 | MS.gene68609:CDS |
| ATTTCTTCTGTTCTGAAGAT+TGG | 0.346895 | 8.1:+7750831 | MS.gene68609:CDS |
| GAGCTGCCCCGTTGAGTAAT+GGG | 0.349853 | 8.1:+7749260 | MS.gene68609:CDS |
| ACTTCTGGCAGCAAGATAAA+TGG | 0.351298 | 8.1:+7749895 | MS.gene68609:CDS |
| CTCTACCTGTCTTGGGGTAA+TGG | 0.360665 | 8.1:-7750862 | None:intergenic |
| TGTTGACTTCAATATGGATA+TGG | 0.361621 | 8.1:+7749872 | MS.gene68609:CDS |
| TAGCAATTTCATTGTCAATA+GGG | 0.363005 | 8.1:-7749525 | None:intergenic |
| GCTTCTGTCAATAGACTTGA+TGG | 0.366272 | 8.1:+7748451 | MS.gene68609:CDS |
| TATTATTGGGTGAACAAAAT+CGG | 0.371689 | 8.1:+7749383 | MS.gene68609:CDS |
| TCAATGCAAGTCAGAGTTAA+TGG | 0.373259 | 8.1:+7750930 | MS.gene68609:CDS |
| TATATTCCAGGTGCTATGAT+TGG | 0.373959 | 8.1:+7748286 | MS.gene68609:CDS |
| TCAATATGGATATGGACTTC+TGG | 0.377834 | 8.1:+7749880 | MS.gene68609:CDS |
| AATATAAGTTGGCGAAGAAA+TGG | 0.379570 | 8.1:-7748368 | None:intergenic |
| TGGTCCTGTTGACTTCAATA+TGG | 0.379915 | 8.1:+7749866 | MS.gene68609:CDS |
| CCATACAATCCTTATATTCC+AGG | 0.381940 | 8.1:+7748274 | MS.gene68609:CDS |
| ACCCTGCTCCCACCAATTAC+GGG | 0.382161 | 8.1:+7747884 | MS.gene68609:CDS |
| CTCACCGTGTACTGAATATC+AGG | 0.385752 | 8.1:-7748097 | None:intergenic |
| ATTGGAGTTGATGGTTCATT+TGG | 0.388143 | 8.1:+7748304 | MS.gene68609:CDS |
| CTCCTTTGAATTGATTATGA+TGG | 0.392180 | 8.1:-7749240 | None:intergenic |
| GCAAAGAAAGATTCGACAAA+TGG | 0.395866 | 8.1:+7748598 | MS.gene68609:CDS |
| ATATAAGTTGGCGAAGAAAT+GGG | 0.400966 | 8.1:-7748367 | None:intergenic |
| AAGTTTCTAATGAAGGGTTT+TGG | 0.402265 | 8.1:+7750597 | MS.gene68609:CDS |
| GAAAACTAAGTTTCTAATGA+AGG | 0.407105 | 8.1:+7750590 | MS.gene68609:CDS |
| CAGAAAACCCATTACTCAAC+GGG | 0.408797 | 8.1:-7749267 | None:intergenic |
| GGTTTCGTCTCTACCTGTCT+TGG | 0.414202 | 8.1:-7750870 | None:intergenic |
| TAAGGATTGTATGGATTGTA+TGG | 0.416713 | 8.1:-7748265 | None:intergenic |
| TGCTTCATCACCTTCCCATC+AGG | 0.416964 | 8.1:+7748651 | MS.gene68609:CDS |
| AACCCGTAATTGGTGGGAGC+AGG | 0.422335 | 8.1:-7747886 | None:intergenic |
| TCCTTTGAATTGATTATGAT+GGG | 0.425302 | 8.1:-7749239 | None:intergenic |
| CACTACATCTGTGGATGAAA+AGG | 0.427457 | 8.1:+7750779 | MS.gene68609:CDS |
| ATCAGACAAGTTCCTTCCTC+AGG | 0.430873 | 8.1:+7748545 | MS.gene68609:CDS |
| CCTGGAATATAAGGATTGTA+TGG | 0.432058 | 8.1:-7748274 | None:intergenic |
| TTTGCCAAAGCATTAGCTCT+TGG | 0.434436 | 8.1:-7748580 | None:intergenic |
| GGTGCTATGATTGGAGTTGA+TGG | 0.439110 | 8.1:+7748295 | MS.gene68609:CDS |
| ATTATTGGGTGAACAAAATC+GGG | 0.439439 | 8.1:+7749384 | MS.gene68609:CDS |
| CTGGGAGCAACATGAACCTT+TGG | 0.447906 | 8.1:-7749337 | None:intergenic |
| GATAATGTATAGAAAGGGTC+TGG | 0.450752 | 8.1:+7750473 | MS.gene68609:intron |
| ATGTGCCTAAAATTTCCATT+TGG | 0.458334 | 8.1:-7749960 | None:intergenic |
| GGAGTTGATGGTTCATTTGG+AGG | 0.459454 | 8.1:+7748307 | MS.gene68609:CDS |
| AGCATTAGCTCTTGGCCCCT+CGG | 0.460855 | 8.1:-7748572 | None:intergenic |
| CCGACTGTGACAACATCAAT+TGG | 0.462977 | 8.1:-7750906 | None:intergenic |
| ACCGCTTCTACTTACATCAC+TGG | 0.463464 | 8.1:-7749356 | None:intergenic |
| ATGATAAAAGATGTGCCAAA+TGG | 0.472322 | 8.1:+7749945 | MS.gene68609:CDS |
| AAATTAAGAAAACCACTGTT+AGG | 0.473007 | 8.1:-7748628 | None:intergenic |
| ATATCCATATTGAAGTCAAC+AGG | 0.473316 | 8.1:-7749870 | None:intergenic |
| AGAAGCGGTGATGTATTATT+GGG | 0.474099 | 8.1:+7749370 | MS.gene68609:CDS |
| GATTTGAATCACCTGGTGAA+TGG | 0.474628 | 8.1:+7748041 | MS.gene68609:CDS |
| GACTGTGCAAATCCATAGTT+AGG | 0.475651 | 8.1:-7748241 | None:intergenic |
| ACTATGGATCTAATGCTAAT+GGG | 0.477126 | 8.1:+7749290 | MS.gene68609:CDS |
| AAAACATTATTCAGCTTTCG+AGG | 0.481363 | 8.1:-7750642 | None:intergenic |
| CCTCCTGCATGACCTTCTGT+CGG | 0.484140 | 8.1:-7750566 | None:intergenic |
| ATGGGGCAAAACATTTCCAT+TGG | 0.484243 | 8.1:-7749221 | None:intergenic |
| TTAGGTGTGTAATATACATA+AGG | 0.485977 | 8.1:-7748223 | None:intergenic |
| ACCGAAAAGAAAAGAAAGAT+AGG | 0.487885 | 8.1:-7749697 | None:intergenic |
| TGTGCAGATAATGTATAGAA+AGG | 0.489425 | 8.1:+7750467 | MS.gene68609:intron |
| ATTTGAATCACCTGGTGAAT+GGG | 0.489938 | 8.1:+7748042 | MS.gene68609:CDS |
| CCCCATCATAATCAATTCAA+AGG | 0.497677 | 8.1:+7749238 | MS.gene68609:CDS |
| AAAACTAAGTTTCTAATGAA+GGG | 0.499233 | 8.1:+7750591 | MS.gene68609:CDS |
| TTCATCCACAGATGTAGTGC+TGG | 0.503907 | 8.1:-7750775 | None:intergenic |
| GAACTTGTCTGATTTGATGA+TGG | 0.508845 | 8.1:-7748535 | None:intergenic |
| AAAACCTATACAGCAAAGTC+AGG | 0.510427 | 8.1:+7749445 | MS.gene68609:CDS |
| GAACTATGATGAAAATTGTC+TGG | 0.512526 | 8.1:-7748403 | None:intergenic |
| TGTATACCTCTTGTGTGTCT+CGG | 0.513829 | 8.1:-7750022 | None:intergenic |
| GATGCTAGGAGAAAAGCTAC+TGG | 0.514734 | 8.1:+7749658 | MS.gene68609:CDS |
| GGGGCCAAGAGCTAATGCTT+TGG | 0.515241 | 8.1:+7748576 | MS.gene68609:CDS |
| ACTTGATCCAAGATCTCTAC+AGG | 0.515937 | 8.1:+7750995 | MS.gene68609:CDS |
| GCATTAGCTCTTGGCCCCTC+GGG | 0.520251 | 8.1:-7748571 | None:intergenic |
| TGAACAAGAGGAATATAAGT+TGG | 0.522275 | 8.1:-7748379 | None:intergenic |
| GGAGCTGCCCCGTTGAGTAA+TGG | 0.524236 | 8.1:+7749259 | MS.gene68609:CDS |
| GTCAATAGACTTGATGGAAG+AGG | 0.526422 | 8.1:+7748457 | MS.gene68609:CDS |
| TTTCGAGGTGGCGCCAACAC+TGG | 0.533894 | 8.1:-7750627 | None:intergenic |
| TCCTTCCTCAGGGTACCCGA+GGG | 0.534598 | 8.1:+7748556 | MS.gene68609:CDS |
| TTATCATGTGCCACTTTACA+GGG | 0.536336 | 8.1:-7749929 | None:intergenic |
| TTCCTTCCTCAGGGTACCCG+AGG | 0.539305 | 8.1:+7748555 | MS.gene68609:CDS |
| TGGTGGTCCTCCCATTCACC+AGG | 0.542526 | 8.1:-7748052 | None:intergenic |
| GTGCAGATAATGTATAGAAA+GGG | 0.542850 | 8.1:+7750468 | MS.gene68609:intron |
| ACCCGTAATTGGTGGGAGCA+GGG | 0.547180 | 8.1:-7747885 | None:intergenic |
| CTCTGATCAACAACAAACTC+AGG | 0.549896 | 8.1:-7747853 | None:intergenic |
| TGTGGAGTTGCTGAGATGGT+TGG | 0.557085 | 8.1:+7749846 | MS.gene68609:CDS |
| GGGTAAGCTTATTACCTGAT+GGG | 0.560408 | 8.1:-7748665 | None:intergenic |
| CCCAGTGATGTAAGTAGAAG+CGG | 0.560429 | 8.1:+7749355 | MS.gene68609:CDS |
| ACAATAAAACCCGTAATTGG+TGG | 0.560985 | 8.1:-7747893 | None:intergenic |
| TGTAGAGATCTTGGATCAAG+TGG | 0.562297 | 8.1:-7750993 | None:intergenic |
| TGCAGTTTCTTGTTTCCATG+AGG | 0.563498 | 8.1:-7749622 | None:intergenic |
| AATTTAAAGACAGATGAACT+TGG | 0.563613 | 8.1:+7750693 | MS.gene68609:CDS |
| TGGCTAGGATTTGAATCACC+TGG | 0.564541 | 8.1:+7748034 | MS.gene68609:intron |
| AAATTGTCTGGTTGAACAAG+AGG | 0.565932 | 8.1:-7748391 | None:intergenic |
| TATAAGTTGGCGAAGAAATG+GGG | 0.569498 | 8.1:-7748366 | None:intergenic |
| GTGTGGTCATCAACACCTCA+TGG | 0.572729 | 8.1:+7749607 | MS.gene68609:CDS |
| ATCGGGGCCCTAGAATTAGT+AGG | 0.574334 | 8.1:+7749401 | MS.gene68609:CDS |
| CCGCTTCTACTTACATCACT+GGG | 0.578603 | 8.1:-7749355 | None:intergenic |
| CCAATTGATGTTGTCACAGT+CGG | 0.582496 | 8.1:+7750906 | MS.gene68609:CDS |
| GTGGGAGCTTCCCTGTAAAG+TGG | 0.586968 | 8.1:+7749919 | MS.gene68609:CDS |
| AACTCCACAAAATTGACCGC+TGG | 0.588632 | 8.1:-7749832 | None:intergenic |
| AAGCTTATTACCTGATGGGA+AGG | 0.591653 | 8.1:-7748661 | None:intergenic |
| CAATAAAACCCGTAATTGGT+GGG | 0.592162 | 8.1:-7747892 | None:intergenic |
| AGTCACCATTACCCCAAGAC+AGG | 0.594914 | 8.1:+7750857 | MS.gene68609:CDS |
| CCCCTCGGGTACCCTGAGGA+AGG | 0.595318 | 8.1:-7748557 | None:intergenic |
| GATCCAAGATCTCTACAGGC+AGG | 0.595943 | 8.1:+7750999 | MS.gene68609:CDS |
| AAACCGACAGAAGGTCATGC+AGG | 0.599786 | 8.1:+7750563 | MS.gene68609:CDS |
| AATTGCTAAACTTCGACCAA+AGG | 0.600391 | 8.1:+7749321 | MS.gene68609:CDS |
| ACATACTTCAATTTCAAATG+CGG | 0.601687 | 8.1:+7750725 | MS.gene68609:CDS |
| AGATCTCTACAGGCAGGCAA+AGG | 0.607123 | 8.1:+7751005 | MS.gene68609:CDS |
| TTTCGTCTCTACCTGTCTTG+GGG | 0.609585 | 8.1:-7750868 | None:intergenic |
| TCAACTCCAATCATAGCACC+TGG | 0.611265 | 8.1:-7748292 | None:intergenic |
| GGCAGCAAGATAAATGGAGT+GGG | 0.612024 | 8.1:+7749901 | MS.gene68609:CDS |
| AGAGTGCTTATGAAGATGCT+AGG | 0.613434 | 8.1:+7749644 | MS.gene68609:CDS |
| TGAATCACCTGGTGAATGGG+AGG | 0.616103 | 8.1:+7748045 | MS.gene68609:CDS |
| TTCAAAGACATGTTTAACGA+AGG | 0.618250 | 8.1:+7747826 | None:intergenic |
| TTACTATGAAAACCGACAGA+AGG | 0.618618 | 8.1:+7750554 | MS.gene68609:CDS |
| CCTTTGAATTGATTATGATG+GGG | 0.619417 | 8.1:-7749238 | None:intergenic |
| TGTCACCAGCACTACATCTG+TGG | 0.635296 | 8.1:+7750770 | MS.gene68609:CDS |
| TGGCAGCAAGATAAATGGAG+TGG | 0.635971 | 8.1:+7749900 | MS.gene68609:CDS |
| TCAGACAAGTTCCTTCCTCA+GGG | 0.638045 | 8.1:+7748546 | MS.gene68609:CDS |
| TCAGAAAACCCATTACTCAA+CGG | 0.638768 | 8.1:-7749268 | None:intergenic |
| AATGGAAGTGTTCCTAACAG+TGG | 0.638957 | 8.1:+7748616 | MS.gene68609:CDS |
| TCAATGTAGGTTAATGCCAG+CGG | 0.649389 | 8.1:+7749816 | MS.gene68609:intron |
| ACATTATTCAGCTTTCGAGG+TGG | 0.659451 | 8.1:-7750639 | None:intergenic |
| AAAGCTACTGGAAAATCTGG+AGG | 0.667052 | 8.1:+7749670 | MS.gene68609:CDS |
| TGTTATAAAATCATACAGTG+AGG | 0.670580 | 8.1:+7749555 | MS.gene68609:CDS |
| GTAGAGATCTTGGATCAAGT+GGG | 0.673059 | 8.1:-7750992 | None:intergenic |
| TGGTCCTGATATTCAGTACA+CGG | 0.673378 | 8.1:+7748093 | MS.gene68609:CDS |
| TTGGCCCCTCGGGTACCCTG+AGG | 0.673523 | 8.1:-7748561 | None:intergenic |
| AAAGCATTAAATATAACGTG+TGG | 0.673580 | 8.1:+7749590 | MS.gene68609:CDS |
| TAACAGCCGAGACACACAAG+AGG | 0.680258 | 8.1:+7750016 | MS.gene68609:CDS |
| CCTTCCTCAGGGTACCCGAG+GGG | 0.684367 | 8.1:+7748557 | MS.gene68609:CDS |
| CCGACAGAAGGTCATGCAGG+AGG | 0.689597 | 8.1:+7750566 | MS.gene68609:CDS |
| TTATTGGGTGAACAAAATCG+GGG | 0.719539 | 8.1:+7749385 | MS.gene68609:CDS |
| TTATACTGATCAATATAACA+GGG | 0.725652 | 8.1:+7749495 | MS.gene68609:CDS |
| TACTGATCAATATAACAGGG+AGG | 0.738774 | 8.1:+7749498 | MS.gene68609:CDS |
| TGAAAAGGTTGAGAATGATG+CGG | 0.755410 | 8.1:+7750794 | MS.gene68609:CDS |
| AGAAAACCCATTACTCAACG+GGG | 0.769685 | 8.1:-7749266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTATATACCTTTTAA+AGG | + | chr8.1:7750332-7750351 | MS.gene68609:intron | 15.0% |
| !! | AAAACTAAGTTTCTAATGAA+GGG | + | chr8.1:7750591-7750610 | MS.gene68609:CDS | 20.0% |
| !! | TTATACTGATCAATATAACA+GGG | + | chr8.1:7749495-7749514 | MS.gene68609:CDS | 20.0% |
| !! | TTTATACTGATCAATATAAC+AGG | + | chr8.1:7749494-7749513 | MS.gene68609:CDS | 20.0% |
| !!! | ATGGTACTTTTTTTATGAAA+AGG | + | chr8.1:7748964-7748983 | MS.gene68609:intron | 20.0% |
| !!! | TTTTCATAAAAAAAGTACCA+TGG | - | chr8.1:7748965-7748984 | None:intergenic | 20.0% |
| ! | AAATTAAGAAAACCACTGTT+AGG | - | chr8.1:7748631-7748650 | None:intergenic | 25.0% |
| ! | AAATTCCAATATAGCTCAAA+AGG | - | chr8.1:7748689-7748708 | None:intergenic | 25.0% |
| ! | AACCTACATTGAAAAAGAAA+GGG | - | chr8.1:7749808-7749827 | None:intergenic | 25.0% |
| ! | AATTCCAATATAGCTCAAAA+GGG | - | chr8.1:7748688-7748707 | None:intergenic | 25.0% |
| ! | AATTTAAAGACAGATGAACT+TGG | + | chr8.1:7750693-7750712 | MS.gene68609:CDS | 25.0% |
| ! | ACATACTTCAATTTCAAATG+CGG | + | chr8.1:7750725-7750744 | MS.gene68609:CDS | 25.0% |
| ! | ATTGTTCGAATTTGTGAATA+TGG | + | chr8.1:7750165-7750184 | MS.gene68609:intron | 25.0% |
| ! | GAAAACTAAGTTTCTAATGA+AGG | + | chr8.1:7750590-7750609 | MS.gene68609:CDS | 25.0% |
| ! | GTCAAAATTATATTAACAGC+AGG | - | chr8.1:7750427-7750446 | None:intergenic | 25.0% |
| ! | TAAAATTGATAAGTGTTCCT+GGG | + | chr8.1:7750076-7750095 | MS.gene68609:intron | 25.0% |
| ! | TAACCTACATTGAAAAAGAA+AGG | - | chr8.1:7749809-7749828 | None:intergenic | 25.0% |
| ! | TAGCAAGTTACTACTATTAT+AGG | + | chr8.1:7748930-7748949 | MS.gene68609:intron | 25.0% |
| ! | TAGCAATTTCATTGTCAATA+GGG | - | chr8.1:7749528-7749547 | None:intergenic | 25.0% |
| ! | TATTATTGGGTGAACAAAAT+CGG | + | chr8.1:7749383-7749402 | MS.gene68609:CDS | 25.0% |
| ! | TCCTTTGAATTGATTATGAT+GGG | - | chr8.1:7749242-7749261 | None:intergenic | 25.0% |
| ! | TGTTATAAAATCATACAGTG+AGG | + | chr8.1:7749555-7749574 | MS.gene68609:CDS | 25.0% |
| ! | TTAAAATTGATAAGTGTTCC+TGG | + | chr8.1:7750075-7750094 | MS.gene68609:intron | 25.0% |
| ! | TTAGCAATTTCATTGTCAAT+AGG | - | chr8.1:7749529-7749548 | None:intergenic | 25.0% |
| ! | TTAGGTGTGTAATATACATA+AGG | - | chr8.1:7748226-7748245 | None:intergenic | 25.0% |
| !! | AAAGCATTAAATATAACGTG+TGG | + | chr8.1:7749590-7749609 | MS.gene68609:CDS | 25.0% |
| !! | TCCTATCTTTCTTTTCTTTT+CGG | + | chr8.1:7749696-7749715 | MS.gene68609:CDS | 25.0% |
| !!! | TAAAAAAAGTACCATGGAAA+AGG | - | chr8.1:7748959-7748978 | None:intergenic | 25.0% |
| !!! | TACATAAGTTTTAGAAGTAC+AGG | - | chr8.1:7749748-7749767 | None:intergenic | 25.0% |
| !!! | TTATTAGTTTGTGAACTTTG+TGG | + | chr8.1:7749014-7749033 | MS.gene68609:intron | 25.0% |
| AAAAATAATCACCGTACCTT+TGG | + | chr8.1:7747928-7747947 | MS.gene68609:intron | 30.0% | |
| AAAACATTATTCAGCTTTCG+AGG | - | chr8.1:7750645-7750664 | None:intergenic | 30.0% | |
| AAACATGTCAAAAGCAAAAG+TGG | - | chr8.1:7748880-7748899 | None:intergenic | 30.0% | |
| AACATGTCAAAAGCAAAAGT+GGG | - | chr8.1:7748879-7748898 | None:intergenic | 30.0% | |
| ACCGAAAAGAAAAGAAAGAT+AGG | - | chr8.1:7749700-7749719 | None:intergenic | 30.0% | |
| ACTATGGATCTAATGCTAAT+GGG | + | chr8.1:7749290-7749309 | MS.gene68609:CDS | 30.0% | |
| ATATCCATATTGAAGTCAAC+AGG | - | chr8.1:7749873-7749892 | None:intergenic | 30.0% | |
| ATGATAAAAGATGTGCCAAA+TGG | + | chr8.1:7749945-7749964 | MS.gene68609:CDS | 30.0% | |
| ATGTGCCTAAAATTTCCATT+TGG | - | chr8.1:7749963-7749982 | None:intergenic | 30.0% | |
| ATTATTGGGTGAACAAAATC+GGG | + | chr8.1:7749384-7749403 | MS.gene68609:CDS | 30.0% | |
| CATAAGCTGGTAAAAAATGT+GGG | + | chr8.1:7750355-7750374 | MS.gene68609:intron | 30.0% | |
| CATCTACACCAAAAATTCTA+TGG | - | chr8.1:7748075-7748094 | None:intergenic | 30.0% | |
| CCTTTGAATTGATTATGATG+GGG | - | chr8.1:7749241-7749260 | None:intergenic | 30.0% | |
| CTCCTTTGAATTGATTATGA+TGG | - | chr8.1:7749243-7749262 | None:intergenic | 30.0% | |
| GAACTATGATGAAAATTGTC+TGG | - | chr8.1:7748406-7748425 | None:intergenic | 30.0% | |
| GAATAGTGTGTTTATATGGA+AGG | + | chr8.1:7748816-7748835 | MS.gene68609:intron | 30.0% | |
| GTATATTACACACCTAACTA+TGG | + | chr8.1:7748229-7748248 | MS.gene68609:CDS | 30.0% | |
| GTGCAGATAATGTATAGAAA+GGG | + | chr8.1:7750468-7750487 | MS.gene68609:intron | 30.0% | |
| TACTCAATTGTTTCCTAACA+AGG | - | chr8.1:7750196-7750215 | None:intergenic | 30.0% | |
| TCAACTAAAAACTTGCATGT+CGG | - | chr8.1:7750113-7750132 | None:intergenic | 30.0% | |
| TGAACAAGAGGAATATAAGT+TGG | - | chr8.1:7748382-7748401 | None:intergenic | 30.0% | |
| TGTACAATAAAACCCGTAAT+TGG | - | chr8.1:7747899-7747918 | None:intergenic | 30.0% | |
| TGTCTCAATGATGTAAATGT+TGG | + | chr8.1:7750298-7750317 | MS.gene68609:intron | 30.0% | |
| TGTGCAGATAATGTATAGAA+AGG | + | chr8.1:7750467-7750486 | MS.gene68609:intron | 30.0% | |
| TTACATCATTGAGACAATCA+AGG | - | chr8.1:7750294-7750313 | None:intergenic | 30.0% | |
| TTGTTAGGAAACAATTGAGT+AGG | + | chr8.1:7750195-7750214 | MS.gene68609:intron | 30.0% | |
| ! | AAATGCTTCTTTCTTTTCCA+GGG | + | chr8.1:7748181-7748200 | MS.gene68609:intron | 30.0% |
| ! | AAATTTTTCTCATCACTTGC+AGG | - | chr8.1:7750678-7750697 | None:intergenic | 30.0% |
| ! | AAGTTTCTAATGAAGGGTTT+TGG | + | chr8.1:7750597-7750616 | MS.gene68609:CDS | 30.0% |
| ! | AATATAAGTTGGCGAAGAAA+TGG | - | chr8.1:7748371-7748390 | None:intergenic | 30.0% |
| ! | AATTGTGTTGTTGTATTTGC+TGG | + | chr8.1:7749067-7749086 | MS.gene68609:intron | 30.0% |
| ! | ATAGCTATATTTTCCTTCTG+TGG | + | chr8.1:7749147-7749166 | MS.gene68609:intron | 30.0% |
| ! | ATATAAGTTGGCGAAGAAAT+GGG | - | chr8.1:7748370-7748389 | None:intergenic | 30.0% |
| ! | ATGTGCCAAATGGAAATTTT+AGG | + | chr8.1:7749955-7749974 | MS.gene68609:CDS | 30.0% |
| ! | GTGTTTATATGGAAGGATTT+TGG | + | chr8.1:7748823-7748842 | MS.gene68609:intron | 30.0% |
| ! | TAAATGCTTCTTTCTTTTCC+AGG | + | chr8.1:7748180-7748199 | MS.gene68609:intron | 30.0% |
| ! | TAAGGATTGTATGGATTGTA+TGG | - | chr8.1:7748268-7748287 | None:intergenic | 30.0% |
| ! | TTTTATGAAAAGGACATGCT+TGG | + | chr8.1:7748974-7748993 | MS.gene68609:intron | 30.0% |
| !! | AAAGGTACGGTGATTATTTT+TGG | - | chr8.1:7747929-7747948 | None:intergenic | 30.0% |
| !! | AAATGGGGTTTTGATAATTG+GGG | - | chr8.1:7748354-7748373 | None:intergenic | 30.0% |
| !! | AGAAATGGGGTTTTGATAAT+TGG | - | chr8.1:7748356-7748375 | None:intergenic | 30.0% |
| !! | ATTTCTTCTGTTCTGAAGAT+TGG | + | chr8.1:7750831-7750850 | MS.gene68609:CDS | 30.0% |
| !! | CTTTTGCTTTTGACATGTTT+AGG | + | chr8.1:7748880-7748899 | MS.gene68609:intron | 30.0% |
| !! | GAAATGGGGTTTTGATAATT+GGG | - | chr8.1:7748355-7748374 | None:intergenic | 30.0% |
| !! | TCAATTGGTTCTGTATTAGA+TGG | - | chr8.1:7750894-7750913 | None:intergenic | 30.0% |
| !! | TGTTGACTTCAATATGGATA+TGG | + | chr8.1:7749872-7749891 | MS.gene68609:CDS | 30.0% |
| !! | TTTGCTGGCTTGTTTATATA+TGG | + | chr8.1:7749082-7749101 | MS.gene68609:intron | 30.0% |
| !! | TTTGCTGTATAGGTTTTGAT+AGG | - | chr8.1:7749442-7749461 | None:intergenic | 30.0% |
| !!! | AATTACGGGTTTTATTGTAC+AGG | + | chr8.1:7747898-7747917 | MS.gene68609:CDS | 30.0% |
| !!! | CATAGAATTTTTGGTGTAGA+TGG | + | chr8.1:7748073-7748092 | MS.gene68609:CDS | 30.0% |
| !!! | TCTGTAGATACTTTTTCCAA+TGG | + | chr8.1:7749205-7749224 | MS.gene68609:CDS | 30.0% |
| AAAACCTATACAGCAAAGTC+AGG | + | chr8.1:7749445-7749464 | MS.gene68609:CDS | 35.0% | |
| AAATTGTCTGGTTGAACAAG+AGG | - | chr8.1:7748394-7748413 | None:intergenic | 35.0% | |
| AATTATGTGTGCATGCGATT+AGG | - | chr8.1:7750235-7750254 | None:intergenic | 35.0% | |
| AATTGCTAAACTTCGACCAA+AGG | + | chr8.1:7749321-7749340 | MS.gene68609:CDS | 35.0% | |
| ACAATAAAACCCGTAATTGG+TGG | - | chr8.1:7747896-7747915 | None:intergenic | 35.0% | |
| ACATGTCAAAAGCAAAAGTG+GGG | - | chr8.1:7748878-7748897 | None:intergenic | 35.0% | |
| AGAAAAGCTACTGGAAAATC+TGG | + | chr8.1:7749667-7749686 | MS.gene68609:CDS | 35.0% | |
| AGAAGCGGTGATGTATTATT+GGG | + | chr8.1:7749370-7749389 | MS.gene68609:CDS | 35.0% | |
| ATCATAGCACCTGGAATATA+AGG | - | chr8.1:7748286-7748305 | None:intergenic | 35.0% | |
| ATTATCTGCACATGAGGAAT+GGG | - | chr8.1:7750459-7750478 | None:intergenic | 35.0% | |
| ATTTGAATCACCTGGTGAAT+GGG | + | chr8.1:7748042-7748061 | MS.gene68609:CDS | 35.0% | |
| CAATAAAACCCGTAATTGGT+GGG | - | chr8.1:7747895-7747914 | None:intergenic | 35.0% | |
| CCATACAATCCTTATATTCC+AGG | + | chr8.1:7748274-7748293 | MS.gene68609:CDS | 35.0% | |
| CCCCATCATAATCAATTCAA+AGG | + | chr8.1:7749238-7749257 | MS.gene68609:CDS | 35.0% | |
| CCTGGAATATAAGGATTGTA+TGG | - | chr8.1:7748277-7748296 | None:intergenic | 35.0% | |
| CTACACCAAAAATTCTATGG+TGG | - | chr8.1:7748072-7748091 | None:intergenic | 35.0% | |
| CTATACATTATCTGCACATG+AGG | - | chr8.1:7750465-7750484 | None:intergenic | 35.0% | |
| GACTATGGATCTAATGCTAA+TGG | + | chr8.1:7749289-7749308 | MS.gene68609:CDS | 35.0% | |
| GATAATGTATAGAAAGGGTC+TGG | + | chr8.1:7750473-7750492 | MS.gene68609:intron | 35.0% | |
| GCAAAGAAAGATTCGACAAA+TGG | + | chr8.1:7748598-7748617 | MS.gene68609:CDS | 35.0% | |
| GCATAAGCTGGTAAAAAATG+TGG | + | chr8.1:7750354-7750373 | MS.gene68609:intron | 35.0% | |
| GCTGGAATAGTGTGTTTATA+TGG | + | chr8.1:7748812-7748831 | MS.gene68609:intron | 35.0% | |
| GTACACGATATATGATCAAC+CGG | - | chr8.1:7747968-7747987 | None:intergenic | 35.0% | |
| TACCAGCTTATGCCTTTAAA+AGG | - | chr8.1:7750347-7750366 | None:intergenic | 35.0% | |
| TACTGATCAATATAACAGGG+AGG | + | chr8.1:7749498-7749517 | MS.gene68609:CDS | 35.0% | |
| TAGAAGCGGTGATGTATTAT+TGG | + | chr8.1:7749369-7749388 | MS.gene68609:CDS | 35.0% | |
| TAGCCACAAAAAATACCAAG+TGG | - | chr8.1:7748020-7748039 | None:intergenic | 35.0% | |
| TATGACACACAAGACACATA+CGG | - | chr8.1:7748140-7748159 | None:intergenic | 35.0% | |
| TCAATATGGATATGGACTTC+TGG | + | chr8.1:7749880-7749899 | MS.gene68609:CDS | 35.0% | |
| TCAATGCAAGTCAGAGTTAA+TGG | + | chr8.1:7750930-7750949 | MS.gene68609:CDS | 35.0% | |
| TCAGAAAACCCATTACTCAA+CGG | - | chr8.1:7749271-7749290 | None:intergenic | 35.0% | |
| TGAAAAGGTTGAGAATGATG+CGG | + | chr8.1:7750794-7750813 | MS.gene68609:CDS | 35.0% | |
| TGTCTTGTGTGTCATATGTT+GGG | + | chr8.1:7748144-7748163 | MS.gene68609:intron | 35.0% | |
| TTACTATGAAAACCGACAGA+AGG | + | chr8.1:7750554-7750573 | MS.gene68609:CDS | 35.0% | |
| TTATTGGGTGAACAAAATCG+GGG | + | chr8.1:7749385-7749404 | MS.gene68609:CDS | 35.0% | |
| ! | AAAGTGTTATCAATGGCAGA+AGG | - | chr8.1:7748849-7748868 | None:intergenic | 35.0% |
| ! | ATTATAGGTCACCTTTTCCA+TGG | + | chr8.1:7748945-7748964 | MS.gene68609:intron | 35.0% |
| ! | CTTACCCTTTTGAGCTATAT+TGG | + | chr8.1:7748681-7748700 | MS.gene68609:intron | 35.0% |
| ! | GAACTTGTCTGATTTGATGA+TGG | - | chr8.1:7748538-7748557 | None:intergenic | 35.0% |
| ! | GAAGCATTTAAATCAGCTGT+CGG | - | chr8.1:7748170-7748189 | None:intergenic | 35.0% |
| ! | GCTTGACAAAGTGTTATCAA+TGG | - | chr8.1:7748856-7748875 | None:intergenic | 35.0% |
| ! | TATAAGTTGGCGAAGAAATG+GGG | - | chr8.1:7748369-7748388 | None:intergenic | 35.0% |
| ! | TATATTCCAGGTGCTATGAT+TGG | + | chr8.1:7748286-7748305 | MS.gene68609:CDS | 35.0% |
| ! | TTGATAGGCAGATGATGTTT+TGG | - | chr8.1:7749427-7749446 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTGTGGTATTGT+AGG | + | chr8.1:7749156-7749175 | MS.gene68609:intron | 35.0% |
| !! | AATGGATTTTCTGAGTCTTC+TGG | + | chr8.1:7750948-7750967 | MS.gene68609:CDS | 35.0% |
| !! | ATTGGAGTTGATGGTTCATT+TGG | + | chr8.1:7748304-7748323 | MS.gene68609:CDS | 35.0% |
| !! | GTTTTGGCCTACTAATTCTA+GGG | - | chr8.1:7749411-7749430 | None:intergenic | 35.0% |
| !! | TACCTTTTAAAGGCATAAGC+TGG | + | chr8.1:7750342-7750361 | MS.gene68609:intron | 35.0% |
| !! | TGAGTCTTCTGGTGTTTTAA+AGG | + | chr8.1:7750959-7750978 | MS.gene68609:CDS | 35.0% |
| !! | TGGAAAAAGTATCTACAGAC+TGG | - | chr8.1:7749204-7749223 | None:intergenic | 35.0% |
| !! | TTATCATGTGCCACTTTACA+GGG | - | chr8.1:7749932-7749951 | None:intergenic | 35.0% |
| !! | TTTATCATGTGCCACTTTAC+AGG | - | chr8.1:7749933-7749952 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTATACCAGTGT+TGG | + | chr8.1:7750614-7750633 | MS.gene68609:CDS | 35.0% |
| !!! | ACTTGGTATTTTTTGTGGCT+AGG | + | chr8.1:7748019-7748038 | MS.gene68609:intron | 35.0% |
| !!! | AGTAATGGGTTTTCTGACTA+TGG | + | chr8.1:7749274-7749293 | MS.gene68609:CDS | 35.0% |
| !!! | CTTCTGGTGTTTTAAAGGTT+GGG | + | chr8.1:7750964-7750983 | MS.gene68609:CDS | 35.0% |
| !!! | GACCCTTTCTTTTTCAATGT+AGG | + | chr8.1:7749803-7749822 | MS.gene68609:intron | 35.0% |
| !!! | TCTTCTGGTGTTTTAAAGGT+TGG | + | chr8.1:7750963-7750982 | MS.gene68609:CDS | 35.0% |
| !!! | TGACCACTTGGTATTTTTTG+TGG | + | chr8.1:7748014-7748033 | MS.gene68609:intron | 35.0% |
| !!! | TGTTTTGGCCTACTAATTCT+AGG | - | chr8.1:7749412-7749431 | None:intergenic | 35.0% |
| AAACACACTATTCCAGCCTA+TGG | - | chr8.1:7748809-7748828 | None:intergenic | 40.0% | |
| AAAGCTACTGGAAAATCTGG+AGG | + | chr8.1:7749670-7749689 | MS.gene68609:CDS | 40.0% | |
| AAGCTTATTACCTGATGGGA+AGG | - | chr8.1:7748664-7748683 | None:intergenic | 40.0% | |
| ACATTATTCAGCTTTCGAGG+TGG | - | chr8.1:7750642-7750661 | None:intergenic | 40.0% | |
| ACTTCTGGCAGCAAGATAAA+TGG | + | chr8.1:7749895-7749914 | MS.gene68609:CDS | 40.0% | |
| ACTTGATCCAAGATCTCTAC+AGG | + | chr8.1:7750995-7751014 | MS.gene68609:CDS | 40.0% | |
| AGAAAACCCATTACTCAACG+GGG | - | chr8.1:7749269-7749288 | None:intergenic | 40.0% | |
| AGGGTAAGCTTATTACCTGA+TGG | - | chr8.1:7748669-7748688 | None:intergenic | 40.0% | |
| ATGAAAAGGACATGCTTGGA+GGG | + | chr8.1:7748978-7748997 | MS.gene68609:intron | 40.0% | |
| ATGACACACAAGACACATAC+GGG | - | chr8.1:7748139-7748158 | None:intergenic | 40.0% | |
| ATGGGGCAAAACATTTCCAT+TGG | - | chr8.1:7749224-7749243 | None:intergenic | 40.0% | |
| CAAACGCAGTTTGTCAAAAG+AGG | + | chr8.1:7748762-7748781 | MS.gene68609:intron | 40.0% | |
| CACTACATCTGTGGATGAAA+AGG | + | chr8.1:7750779-7750798 | MS.gene68609:CDS | 40.0% | |
| CAGAAAACCCATTACTCAAC+GGG | - | chr8.1:7749270-7749289 | None:intergenic | 40.0% | |
| CAGTATGACTAATCGAAGGA+AGG | - | chr8.1:7749784-7749803 | None:intergenic | 40.0% | |
| CATGAGGAATGGGTATTTGA+TGG | - | chr8.1:7750449-7750468 | None:intergenic | 40.0% | |
| CATTATCTGCACATGAGGAA+TGG | - | chr8.1:7750460-7750479 | None:intergenic | 40.0% | |
| CCAATTGATGTTGTCACAGT+CGG | + | chr8.1:7750906-7750925 | MS.gene68609:CDS | 40.0% | |
| CTCTGATCAACAACAAACTC+AGG | - | chr8.1:7747856-7747875 | None:intergenic | 40.0% | |
| GACTGTGCAAATCCATAGTT+AGG | - | chr8.1:7748244-7748263 | None:intergenic | 40.0% | |
| GATTTGAATCACCTGGTGAA+TGG | + | chr8.1:7748041-7748060 | MS.gene68609:CDS | 40.0% | |
| GCTTCTGTCAATAGACTTGA+TGG | + | chr8.1:7748451-7748470 | MS.gene68609:CDS | 40.0% | |
| GGGTAAGCTTATTACCTGAT+GGG | - | chr8.1:7748668-7748687 | None:intergenic | 40.0% | |
| GTAGAGATCTTGGATCAAGT+GGG | - | chr8.1:7750995-7751014 | None:intergenic | 40.0% | |
| GTCAATAGACTTGATGGAAG+AGG | + | chr8.1:7748457-7748476 | MS.gene68609:CDS | 40.0% | |
| GTGTCTTGTGTGTCATATGT+TGG | + | chr8.1:7748143-7748162 | MS.gene68609:intron | 40.0% | |
| TATGAAAAGGACATGCTTGG+AGG | + | chr8.1:7748977-7748996 | MS.gene68609:intron | 40.0% | |
| TCAATGTAGGTTAATGCCAG+CGG | + | chr8.1:7749816-7749835 | MS.gene68609:intron | 40.0% | |
| TGGTCCTGATATTCAGTACA+CGG | + | chr8.1:7748093-7748112 | MS.gene68609:CDS | 40.0% | |
| TGTAGAGATCTTGGATCAAG+TGG | - | chr8.1:7750996-7751015 | None:intergenic | 40.0% | |
| TGTATACCTCTTGTGTGTCT+CGG | - | chr8.1:7750025-7750044 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTATGAAGATGCT+AGG | + | chr8.1:7749644-7749663 | MS.gene68609:CDS | 40.0% |
| ! | ATCTCCTGACTTTGCTGTAT+AGG | - | chr8.1:7749452-7749471 | None:intergenic | 40.0% |
| ! | ATTTTGTGGAGTTGCTGAGA+TGG | + | chr8.1:7749842-7749861 | MS.gene68609:CDS | 40.0% |
| ! | CTCTTTTGACAAACTGCGTT+TGG | - | chr8.1:7748764-7748783 | None:intergenic | 40.0% |
| ! | GAGGACCACCATAGAATTTT+TGG | + | chr8.1:7748064-7748083 | MS.gene68609:CDS | 40.0% |
| ! | TATGCACTGTATTGACCACT+TGG | + | chr8.1:7748002-7748021 | MS.gene68609:intron | 40.0% |
| ! | TGCAGTTTCTTGTTTCCATG+AGG | - | chr8.1:7749625-7749644 | None:intergenic | 40.0% |
| ! | TTTGCCAAAGCATTAGCTCT+TGG | - | chr8.1:7748583-7748602 | None:intergenic | 40.0% |
| !! | AATGGAAGTGTTCCTAACAG+TGG | + | chr8.1:7748616-7748635 | MS.gene68609:CDS | 40.0% |
| !! | AATGTGGGTTCATCGACTTT+AGG | + | chr8.1:7750370-7750389 | MS.gene68609:intron | 40.0% |
| !! | GAATATGGTGTTGCCTTGTT+AGG | + | chr8.1:7750180-7750199 | MS.gene68609:intron | 40.0% |
| !! | TGGTCCTGTTGACTTCAATA+TGG | + | chr8.1:7749866-7749885 | MS.gene68609:CDS | 40.0% |
| AACTCCACAAAATTGACCGC+TGG | - | chr8.1:7749835-7749854 | None:intergenic | 45.0% | |
| AACTTTCATCTTGTGCACCC+TGG | - | chr8.1:7748201-7748220 | None:intergenic | 45.0% | |
| AATCACCGTACCTTTGGCAT+TGG | + | chr8.1:7747934-7747953 | MS.gene68609:intron | 45.0% | |
| ACCGCTTCTACTTACATCAC+TGG | - | chr8.1:7749359-7749378 | None:intergenic | 45.0% | |
| ACTATTCCAGCCTATGGCTA+TGG | - | chr8.1:7748803-7748822 | None:intergenic | 45.0% | |
| ATCACCGTACCTTTGGCATT+GGG | + | chr8.1:7747935-7747954 | MS.gene68609:intron | 45.0% | |
| ATCAGACAAGTTCCTTCCTC+AGG | + | chr8.1:7748545-7748564 | MS.gene68609:CDS | 45.0% | |
| CCCAGTGATGTAAGTAGAAG+CGG | + | chr8.1:7749355-7749374 | MS.gene68609:CDS | 45.0% | |
| CCGACTGTGACAACATCAAT+TGG | - | chr8.1:7750909-7750928 | None:intergenic | 45.0% | |
| CCGCTTCTACTTACATCACT+GGG | - | chr8.1:7749358-7749377 | None:intergenic | 45.0% | |
| CTAGCCTACAATACCACAGA+AGG | - | chr8.1:7749163-7749182 | None:intergenic | 45.0% | |
| CTCACCGTGTACTGAATATC+AGG | - | chr8.1:7748100-7748119 | None:intergenic | 45.0% | |
| GATGCTAGGAGAAAAGCTAC+TGG | + | chr8.1:7749658-7749677 | MS.gene68609:CDS | 45.0% | |
| GGCAGCAAGATAAATGGAGT+GGG | + | chr8.1:7749901-7749920 | MS.gene68609:CDS | 45.0% | |
| GGGTCAGTATGACTAATCGA+AGG | - | chr8.1:7749788-7749807 | None:intergenic | 45.0% | |
| GTTTCGTCTCTACCTGTCTT+GGG | - | chr8.1:7750872-7750891 | None:intergenic | 45.0% | |
| TCAACTCCAATCATAGCACC+TGG | - | chr8.1:7748295-7748314 | None:intergenic | 45.0% | |
| TCAGACAAGTTCCTTCCTCA+GGG | + | chr8.1:7748546-7748565 | MS.gene68609:CDS | 45.0% | |
| TGGCAGCAAGATAAATGGAG+TGG | + | chr8.1:7749900-7749919 | MS.gene68609:CDS | 45.0% | |
| TGGCTAGGATTTGAATCACC+TGG | + | chr8.1:7748034-7748053 | MS.gene68609:intron | 45.0% | |
| TTCATCCACAGATGTAGTGC+TGG | - | chr8.1:7750778-7750797 | None:intergenic | 45.0% | |
| TTTCGTCTCTACCTGTCTTG+GGG | - | chr8.1:7750871-7750890 | None:intergenic | 45.0% | |
| ! | AATGCCAGCGGTCAATTTTG+TGG | + | chr8.1:7749828-7749847 | MS.gene68609:CDS | 45.0% |
| ! | GGTGCTATGATTGGAGTTGA+TGG | + | chr8.1:7748295-7748314 | MS.gene68609:CDS | 45.0% |
| ! | TGTCGGTTATAAATGCTCCC+AGG | - | chr8.1:7750096-7750115 | None:intergenic | 45.0% |
| ! | TTTGGCATTGGGGTTGAATC+CGG | + | chr8.1:7747946-7747965 | MS.gene68609:intron | 45.0% |
| !! | GGAGTTGATGGTTCATTTGG+AGG | + | chr8.1:7748307-7748326 | MS.gene68609:CDS | 45.0% |
| !! | GGGGTTTTGATAATTGGGGA+GGG | - | chr8.1:7748350-7748369 | None:intergenic | 45.0% |
| !! | TGGGGTTTTGATAATTGGGG+AGG | - | chr8.1:7748351-7748370 | None:intergenic | 45.0% |
| !! | TGGGTTCATCGACTTTAGGA+GGG | + | chr8.1:7750374-7750393 | MS.gene68609:intron | 45.0% |
| !!! | CAGCTTCTGCTGCTTTTACT+AGG | + | chr8.1:7748500-7748519 | MS.gene68609:CDS | 45.0% |
| AAACCGACAGAAGGTCATGC+AGG | + | chr8.1:7750563-7750582 | MS.gene68609:CDS | 50.0% | |
| AGATCTCTACAGGCAGGCAA+AGG | + | chr8.1:7751005-7751024 | MS.gene68609:CDS | 50.0% | |
| AGTCACCATTACCCCAAGAC+AGG | + | chr8.1:7750857-7750876 | MS.gene68609:CDS | 50.0% | |
| ATCGGGGCCCTAGAATTAGT+AGG | + | chr8.1:7749401-7749420 | MS.gene68609:CDS | 50.0% | |
| CAACCCCAATGCCAAAGGTA+CGG | - | chr8.1:7747942-7747961 | None:intergenic | 50.0% | |
| CTCTACCTGTCTTGGGGTAA+TGG | - | chr8.1:7750865-7750884 | None:intergenic | 50.0% | |
| CTGGGAGCAACATGAACCTT+TGG | - | chr8.1:7749340-7749359 | None:intergenic | 50.0% | |
| GACAAACTGCGTTTGGCAGA+TGG | - | chr8.1:7748757-7748776 | None:intergenic | 50.0% | |
| GATCCAAGATCTCTACAGGC+AGG | + | chr8.1:7750999-7751018 | MS.gene68609:CDS | 50.0% | |
| GGATTCAACCCCAATGCCAA+AGG | - | chr8.1:7747947-7747966 | None:intergenic | 50.0% | |
| GGTTTCGTCTCTACCTGTCT+TGG | - | chr8.1:7750873-7750892 | None:intergenic | 50.0% | |
| GTGTCTCGGCTGTTAGTTAC+AGG | - | chr8.1:7750011-7750030 | None:intergenic | 50.0% | |
| GTGTGGTCATCAACACCTCA+TGG | + | chr8.1:7749607-7749626 | MS.gene68609:CDS | 50.0% | |
| TAACAGCCGAGACACACAAG+AGG | + | chr8.1:7750016-7750035 | MS.gene68609:CDS | 50.0% | |
| TACCCTGCTCCCACCAATTA+CGG | + | chr8.1:7747883-7747902 | MS.gene68609:CDS | 50.0% | |
| TCACCGTACCTTTGGCATTG+GGG | + | chr8.1:7747936-7747955 | MS.gene68609:intron | 50.0% | |
| TGAATCACCTGGTGAATGGG+AGG | + | chr8.1:7748045-7748064 | MS.gene68609:CDS | 50.0% | |
| TGAGCATGTCAAGTCAGTGC+TGG | + | chr8.1:7748714-7748733 | MS.gene68609:intron | 50.0% | |
| TGCTTCATCACCTTCCCATC+AGG | + | chr8.1:7748651-7748670 | MS.gene68609:CDS | 50.0% | |
| TGTCACCAGCACTACATCTG+TGG | + | chr8.1:7750770-7750789 | MS.gene68609:CDS | 50.0% | |
| TGTGGAGTTGCTGAGATGGT+TGG | + | chr8.1:7749846-7749865 | MS.gene68609:CDS | 50.0% | |
| TTGCCTGCCTGTAGAGATCT+TGG | - | chr8.1:7751005-7751024 | None:intergenic | 50.0% | |
| TTGTCAAAAGAGGCCTGTCG+TGG | + | chr8.1:7748772-7748791 | MS.gene68609:intron | 50.0% | |
| ! | CTTTAGGAGGGTCTTCAGCT+TGG | + | chr8.1:7750386-7750405 | MS.gene68609:intron | 50.0% |
| !! | GTGGGTTCATCGACTTTAGG+AGG | + | chr8.1:7750373-7750392 | MS.gene68609:intron | 50.0% |
| AACCCGTAATTGGTGGGAGC+AGG | - | chr8.1:7747889-7747908 | None:intergenic | 55.0% | |
| ACCCGTAATTGGTGGGAGCA+GGG | - | chr8.1:7747888-7747907 | None:intergenic | 55.0% | |
| ACCCTGCTCCCACCAATTAC+GGG | + | chr8.1:7747884-7747903 | MS.gene68609:CDS | 55.0% | |
| CAAGACACATACGGGCAGAG+AGG | - | chr8.1:7748131-7748150 | None:intergenic | 55.0% | |
| CCTCCTGCATGACCTTCTGT+CGG | - | chr8.1:7750569-7750588 | None:intergenic | 55.0% | |
| GAGCTGCCCCGTTGAGTAAT+GGG | + | chr8.1:7749260-7749279 | MS.gene68609:CDS | 55.0% | |
| GGGGCCAAGAGCTAATGCTT+TGG | + | chr8.1:7748576-7748595 | MS.gene68609:CDS | 55.0% | |
| GTGGGAGCTTCCCTGTAAAG+TGG | + | chr8.1:7749919-7749938 | MS.gene68609:CDS | 55.0% | |
| ! | AGCATTAGCTCTTGGCCCCT+CGG | - | chr8.1:7748575-7748594 | None:intergenic | 55.0% |
| !! | ATGTCAAGTCAGTGCTGGCG+TGG | + | chr8.1:7748719-7748738 | MS.gene68609:intron | 55.0% |
| CCGACAGAAGGTCATGCAGG+AGG | + | chr8.1:7750566-7750585 | MS.gene68609:CDS | 60.0% | |
| CGTGGCAGTGCCATAGCCAT+AGG | + | chr8.1:7748790-7748809 | MS.gene68609:intron | 60.0% | |
| GCAGTGCCATAGCCATAGGC+TGG | + | chr8.1:7748794-7748813 | MS.gene68609:intron | 60.0% | |
| GGAGCTGCCCCGTTGAGTAA+TGG | + | chr8.1:7749259-7749278 | MS.gene68609:CDS | 60.0% | |
| TGGTGGTCCTCCCATTCACC+AGG | - | chr8.1:7748055-7748074 | None:intergenic | 60.0% | |
| TTTCGAGGTGGCGCCAACAC+TGG | - | chr8.1:7750630-7750649 | None:intergenic | 60.0% | |
| ! | GCATTAGCTCTTGGCCCCTC+GGG | - | chr8.1:7748574-7748593 | None:intergenic | 60.0% |
| ! | TCCTTCCTCAGGGTACCCGA+GGG | + | chr8.1:7748556-7748575 | MS.gene68609:CDS | 60.0% |
| ! | TTCCTTCCTCAGGGTACCCG+AGG | + | chr8.1:7748555-7748574 | MS.gene68609:CDS | 60.0% |
| GGCTATGGCACTGCCACGAC+AGG | - | chr8.1:7748788-7748807 | None:intergenic | 65.0% | |
| ! | CCTTCCTCAGGGTACCCGAG+GGG | + | chr8.1:7748557-7748576 | MS.gene68609:CDS | 65.0% |
| CCCCTCGGGTACCCTGAGGA+AGG | - | chr8.1:7748560-7748579 | None:intergenic | 70.0% | |
| TTGGCCCCTCGGGTACCCTG+AGG | - | chr8.1:7748564-7748583 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 7747835 | 7751049 | 7747835 | ID=MS.gene68609 |
| chr8.1 | mRNA | 7747835 | 7751049 | 7747835 | ID=MS.gene68609.t1;Parent=MS.gene68609 |
| chr8.1 | exon | 7747835 | 7747919 | 7747835 | ID=MS.gene68609.t1.exon1;Parent=MS.gene68609.t1 |
| chr8.1 | CDS | 7747835 | 7747919 | 7747835 | ID=cds.MS.gene68609.t1;Parent=MS.gene68609.t1 |
| chr8.1 | exon | 7748041 | 7748114 | 7748041 | ID=MS.gene68609.t1.exon2;Parent=MS.gene68609.t1 |
| chr8.1 | CDS | 7748041 | 7748114 | 7748041 | ID=cds.MS.gene68609.t1;Parent=MS.gene68609.t1 |
| chr8.1 | exon | 7748202 | 7748672 | 7748202 | ID=MS.gene68609.t1.exon3;Parent=MS.gene68609.t1 |
| chr8.1 | CDS | 7748202 | 7748672 | 7748202 | ID=cds.MS.gene68609.t1;Parent=MS.gene68609.t1 |
| chr8.1 | exon | 7749178 | 7749717 | 7749178 | ID=MS.gene68609.t1.exon4;Parent=MS.gene68609.t1 |
| chr8.1 | CDS | 7749178 | 7749717 | 7749178 | ID=cds.MS.gene68609.t1;Parent=MS.gene68609.t1 |
| chr8.1 | exon | 7749825 | 7750037 | 7749825 | ID=MS.gene68609.t1.exon5;Parent=MS.gene68609.t1 |
| chr8.1 | CDS | 7749825 | 7750037 | 7749825 | ID=cds.MS.gene68609.t1;Parent=MS.gene68609.t1 |
| chr8.1 | exon | 7750474 | 7751049 | 7750474 | ID=MS.gene68609.t1.exon6;Parent=MS.gene68609.t1 |
| chr8.1 | CDS | 7750474 | 7751049 | 7750474 | ID=cds.MS.gene68609.t1;Parent=MS.gene68609.t1 |
| Gene Sequence |
| Protein sequence |
