Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26804.t1 | XP_003609844.1 | 97.2 | 652 | 17 | 1 | 1 | 652 | 1 | 651 | 0.00E+00 | 1213 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26804.t1 | Q9LJE5 | 37.5 | 557 | 278 | 15 | 7 | 503 | 62 | 608 | 3.2e-76 | 287.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26804.t1 | G7JQ12 | 97.2 | 652 | 17 | 1 | 1 | 652 | 1 | 651 | 0.0e+00 | 1213.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052161 | MS.gene26804 | 0.853259 | 2.69E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26804 | MS.gene90430 | PPI |
| MS.gene26804 | MS.gene90428 | PPI |
| MS.gene26804 | MS.gene90387 | PPI |
| MS.gene26804 | MS.gene90429 | PPI |
| MS.gene26804 | MS.gene071540 | PPI |
| MS.gene26804 | MS.gene071539 | PPI |
| MS.gene26804 | MS.gene071541 | PPI |
| MS.gene26804 | MS.gene60934 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26804.t1 | MTR_4g123630 | 97.239 | 652 | 17 | 1 | 1 | 652 | 1 | 651 | 0.0 | 1309 |
| MS.gene26804.t1 | MTR_2g032660 | 66.263 | 661 | 207 | 12 | 1 | 652 | 37 | 690 | 0.0 | 845 |
| MS.gene26804.t1 | MTR_4g005110 | 41.996 | 531 | 247 | 19 | 11 | 503 | 54 | 561 | 2.10e-100 | 320 |
| MS.gene26804.t1 | MTR_2g063460 | 42.268 | 485 | 235 | 13 | 35 | 506 | 95 | 547 | 1.10e-98 | 314 |
| MS.gene26804.t1 | MTR_2g063460 | 42.268 | 485 | 235 | 13 | 35 | 506 | 93 | 545 | 1.22e-98 | 314 |
| MS.gene26804.t1 | MTR_8g088390 | 58.974 | 234 | 81 | 4 | 281 | 503 | 293 | 522 | 3.83e-84 | 276 |
| MS.gene26804.t1 | MTR_8g088390 | 58.974 | 234 | 81 | 4 | 281 | 503 | 358 | 587 | 6.99e-84 | 277 |
| MS.gene26804.t1 | MTR_7g085500 | 48.505 | 301 | 118 | 7 | 224 | 503 | 310 | 594 | 3.58e-80 | 267 |
| MS.gene26804.t1 | MTR_2g005840 | 62.434 | 189 | 71 | 0 | 315 | 503 | 233 | 421 | 3.24e-79 | 260 |
| MS.gene26804.t1 | MTR_2g005840 | 62.434 | 189 | 71 | 0 | 315 | 503 | 264 | 452 | 9.71e-79 | 259 |
| MS.gene26804.t1 | MTR_6g032970 | 54.167 | 240 | 84 | 3 | 281 | 503 | 338 | 568 | 4.10e-77 | 259 |
| MS.gene26804.t1 | MTR_2g032070 | 72.340 | 47 | 13 | 0 | 6 | 52 | 28 | 74 | 1.14e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26804.t1 | AT1G48110 | 48.964 | 676 | 266 | 18 | 4 | 642 | 5 | 638 | 0.0 | 566 |
| MS.gene26804.t1 | AT1G48110 | 48.964 | 676 | 266 | 18 | 4 | 642 | 5 | 638 | 0.0 | 566 |
| MS.gene26804.t1 | AT3G17330 | 44.193 | 663 | 263 | 17 | 1 | 636 | 1 | 583 | 3.06e-163 | 481 |
| MS.gene26804.t1 | AT3G17330 | 44.193 | 663 | 263 | 17 | 1 | 636 | 1 | 583 | 3.06e-163 | 481 |
| MS.gene26804.t1 | AT3G17330 | 42.644 | 537 | 223 | 14 | 126 | 636 | 4 | 481 | 3.09e-116 | 357 |
| MS.gene26804.t1 | AT3G13460 | 58.996 | 239 | 82 | 3 | 281 | 507 | 375 | 609 | 5.64e-90 | 293 |
| MS.gene26804.t1 | AT3G13460 | 58.996 | 239 | 82 | 3 | 281 | 507 | 378 | 612 | 6.12e-90 | 293 |
| MS.gene26804.t1 | AT3G13460 | 58.996 | 239 | 82 | 3 | 281 | 507 | 377 | 611 | 6.50e-90 | 293 |
| MS.gene26804.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 282 | 477 | 3.53e-89 | 287 |
| MS.gene26804.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 282 | 477 | 3.53e-89 | 287 |
| MS.gene26804.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 282 | 477 | 3.53e-89 | 287 |
| MS.gene26804.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 345 | 564 | 5.74e-89 | 290 |
| MS.gene26804.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 323 | 542 | 6.58e-89 | 289 |
| MS.gene26804.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 323 | 542 | 6.58e-89 | 289 |
| MS.gene26804.t1 | AT1G79270 | 68.367 | 196 | 62 | 0 | 309 | 504 | 297 | 492 | 6.61e-89 | 287 |
| MS.gene26804.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 335 | 554 | 7.15e-89 | 290 |
| MS.gene26804.t1 | AT5G61020 | 55.365 | 233 | 92 | 3 | 281 | 505 | 199 | 427 | 9.51e-83 | 270 |
| MS.gene26804.t1 | AT5G61020 | 55.365 | 233 | 92 | 3 | 281 | 505 | 201 | 429 | 1.02e-82 | 270 |
| MS.gene26804.t1 | AT5G58190 | 56.054 | 223 | 90 | 3 | 285 | 503 | 275 | 493 | 1.83e-77 | 256 |
| MS.gene26804.t1 | AT5G58190 | 56.054 | 223 | 90 | 3 | 285 | 503 | 274 | 492 | 1.92e-77 | 256 |
| MS.gene26804.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 191 | 407 | 6.24e-76 | 249 |
| MS.gene26804.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 195 | 411 | 6.28e-76 | 249 |
| MS.gene26804.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 192 | 408 | 7.84e-76 | 249 |
| MS.gene26804.t1 | AT1G27960 | 53.744 | 227 | 82 | 3 | 280 | 503 | 216 | 422 | 1.97e-75 | 249 |
| MS.gene26804.t1 | AT1G27960 | 53.744 | 227 | 82 | 3 | 280 | 503 | 290 | 496 | 8.22e-75 | 250 |
| MS.gene26804.t1 | AT1G09810 | 61.979 | 192 | 73 | 0 | 310 | 501 | 166 | 357 | 2.40e-74 | 245 |
| MS.gene26804.t1 | AT1G09810 | 62.567 | 187 | 70 | 0 | 315 | 501 | 213 | 399 | 2.42e-74 | 246 |
| MS.gene26804.t1 | AT1G09810 | 61.979 | 192 | 73 | 0 | 310 | 501 | 189 | 380 | 3.31e-74 | 246 |
| MS.gene26804.t1 | AT3G13060 | 59.184 | 196 | 76 | 1 | 280 | 475 | 345 | 536 | 2.09e-70 | 238 |
| MS.gene26804.t1 | AT3G13460 | 55.285 | 123 | 39 | 3 | 281 | 391 | 378 | 496 | 1.55e-30 | 126 |
| MS.gene26804.t1 | AT3G13060 | 49.107 | 112 | 53 | 1 | 280 | 391 | 345 | 452 | 1.24e-24 | 107 |
| MS.gene26804.t1 | AT1G27960 | 45.690 | 116 | 40 | 3 | 280 | 392 | 290 | 385 | 1.35e-19 | 92.4 |
| MS.gene26804.t1 | AT4G11970 | 29.282 | 181 | 100 | 4 | 322 | 485 | 49 | 218 | 2.41e-15 | 79.0 |
| MS.gene26804.t1 | AT4G11970 | 29.282 | 181 | 100 | 4 | 322 | 485 | 49 | 218 | 2.65e-15 | 78.6 |
| MS.gene26804.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 3.70e-15 | 78.2 |
| MS.gene26804.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 1.65e-14 | 76.6 |
| MS.gene26804.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 1.65e-14 | 76.6 |
Find 147 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCGGCTGTTAGTTAC+AGG | 0.207434 | 8.2:-10498405 | None:intergenic |
| TTTATCATGTGCCACTTTAC+AGG | 0.241019 | 8.2:-10498327 | None:intergenic |
| TAGAAGCGGTGATGTATTAT+TGG | 0.272352 | 8.2:+10497766 | MS.gene26804:CDS |
| GACTATGGATCTAATGCTAA+TGG | 0.294071 | 8.2:+10497686 | MS.gene26804:CDS |
| ATCATAGCACCTGGAATATA+AGG | 0.296402 | 8.2:-10496680 | None:intergenic |
| TTGATAGGCAGATGATGTTT+TGG | 0.299423 | 8.2:-10497821 | None:intergenic |
| TACCCTGCTCCCACCAATTA+CGG | 0.302628 | 8.2:+10496280 | MS.gene26804:CDS |
| TGTACAATAAAACCCGTAAT+TGG | 0.304533 | 8.2:-10496293 | None:intergenic |
| TCAATTGGTTCTGTATTAGA+TGG | 0.309724 | 8.2:-10499288 | None:intergenic |
| TTGCCTGCCTGTAGAGATCT+TGG | 0.313418 | 8.2:-10499399 | None:intergenic |
| TTAGCAATTTCATTGTCAAT+AGG | 0.315116 | 8.2:-10497923 | None:intergenic |
| AGAAAAGCTACTGGAAAATC+TGG | 0.315736 | 8.2:+10498064 | MS.gene26804:CDS |
| GTATATTACACACCTAACTA+TGG | 0.315879 | 8.2:+10496626 | MS.gene26804:CDS |
| ATCTCCTGACTTTGCTGTAT+AGG | 0.335846 | 8.2:-10497846 | None:intergenic |
| GTTTCGTCTCTACCTGTCTT+GGG | 0.344280 | 8.2:-10499266 | None:intergenic |
| TTTATACTGATCAATATAAC+AGG | 0.344509 | 8.2:+10497891 | MS.gene26804:CDS |
| ATTTCTTCTGTTCTGAAGAT+TGG | 0.346895 | 8.2:+10499228 | MS.gene26804:CDS |
| GAGCTGCCCCGTTGAGTAAT+GGG | 0.349853 | 8.2:+10497657 | MS.gene26804:CDS |
| ACTTCTGGCAGCAAGATAAA+TGG | 0.351298 | 8.2:+10498292 | MS.gene26804:CDS |
| CTCTACCTGTCTTGGGGTAA+TGG | 0.360665 | 8.2:-10499259 | None:intergenic |
| TGTTGACTTCAATATGGATA+TGG | 0.361621 | 8.2:+10498269 | MS.gene26804:CDS |
| TAGCAATTTCATTGTCAATA+GGG | 0.363005 | 8.2:-10497922 | None:intergenic |
| GCTTCTGTCAATAGACTTGA+TGG | 0.366272 | 8.2:+10496848 | MS.gene26804:CDS |
| TATTATTGGGTGAACAAAAT+CGG | 0.371689 | 8.2:+10497780 | MS.gene26804:CDS |
| TCAATGCAAGTCAGAGTTAA+TGG | 0.373259 | 8.2:+10499327 | MS.gene26804:CDS |
| TATATTCCAGGTGCTATGAT+TGG | 0.373959 | 8.2:+10496683 | MS.gene26804:CDS |
| TCAATATGGATATGGACTTC+TGG | 0.377834 | 8.2:+10498277 | MS.gene26804:CDS |
| AATATAAGTTGGCGAAGAAA+TGG | 0.379570 | 8.2:-10496765 | None:intergenic |
| TGGTCCTGTTGACTTCAATA+TGG | 0.379915 | 8.2:+10498263 | MS.gene26804:CDS |
| CCATACAATCCTTATATTCC+AGG | 0.381940 | 8.2:+10496671 | MS.gene26804:CDS |
| ACCCTGCTCCCACCAATTAC+GGG | 0.382161 | 8.2:+10496281 | MS.gene26804:CDS |
| CTCACCGTGTACTGAATATC+AGG | 0.385752 | 8.2:-10496494 | None:intergenic |
| ATTGGAGTTGATGGTTCATT+TGG | 0.388143 | 8.2:+10496701 | MS.gene26804:CDS |
| CTCCTTTGAATTGATTATGA+TGG | 0.392180 | 8.2:-10497637 | None:intergenic |
| GCAAAGAAAGATTCGACAAA+TGG | 0.395866 | 8.2:+10496995 | MS.gene26804:CDS |
| ATATAAGTTGGCGAAGAAAT+GGG | 0.400966 | 8.2:-10496764 | None:intergenic |
| AAGTTTCTAATGAAGGGTTT+TGG | 0.402265 | 8.2:+10498994 | MS.gene26804:CDS |
| GAAAACTAAGTTTCTAATGA+AGG | 0.407105 | 8.2:+10498987 | MS.gene26804:CDS |
| CAGAAAACCCATTACTCAAC+GGG | 0.408797 | 8.2:-10497664 | None:intergenic |
| GGTTTCGTCTCTACCTGTCT+TGG | 0.414202 | 8.2:-10499267 | None:intergenic |
| TAAGGATTGTATGGATTGTA+TGG | 0.416713 | 8.2:-10496662 | None:intergenic |
| TGCTTCATCACCTTCCCATC+AGG | 0.416964 | 8.2:+10497048 | MS.gene26804:CDS |
| AACCCGTAATTGGTGGGAGC+AGG | 0.422335 | 8.2:-10496283 | None:intergenic |
| TCCTTTGAATTGATTATGAT+GGG | 0.425302 | 8.2:-10497636 | None:intergenic |
| CACTACATCTGTGGATGAAA+AGG | 0.427457 | 8.2:+10499176 | MS.gene26804:CDS |
| ATCAGACAAGTTCCTTCCTC+AGG | 0.430873 | 8.2:+10496942 | MS.gene26804:CDS |
| CCTGGAATATAAGGATTGTA+TGG | 0.432058 | 8.2:-10496671 | None:intergenic |
| TTTGCCAAAGCATTAGCTCT+TGG | 0.434436 | 8.2:-10496977 | None:intergenic |
| GGTGCTATGATTGGAGTTGA+TGG | 0.439110 | 8.2:+10496692 | MS.gene26804:CDS |
| ATTATTGGGTGAACAAAATC+GGG | 0.439439 | 8.2:+10497781 | MS.gene26804:CDS |
| CTGGGAGCAACATGAACCTT+TGG | 0.447906 | 8.2:-10497734 | None:intergenic |
| GATAATGTATAGAAAGGGTC+TGG | 0.450752 | 8.2:+10498870 | MS.gene26804:intron |
| ATGTGCCTAAAATTTCCATT+TGG | 0.458334 | 8.2:-10498357 | None:intergenic |
| GGAGTTGATGGTTCATTTGG+AGG | 0.459454 | 8.2:+10496704 | MS.gene26804:CDS |
| AGCATTAGCTCTTGGCCCCT+CGG | 0.460855 | 8.2:-10496969 | None:intergenic |
| CCGACTGTGACAACATCAAT+TGG | 0.462977 | 8.2:-10499303 | None:intergenic |
| ACCGCTTCTACTTACATCAC+TGG | 0.463464 | 8.2:-10497753 | None:intergenic |
| ATGATAAAAGATGTGCCAAA+TGG | 0.472322 | 8.2:+10498342 | MS.gene26804:CDS |
| AAATTAAGAAAACCACTGTT+AGG | 0.473007 | 8.2:-10497025 | None:intergenic |
| ATATCCATATTGAAGTCAAC+AGG | 0.473316 | 8.2:-10498267 | None:intergenic |
| AGAAGCGGTGATGTATTATT+GGG | 0.474099 | 8.2:+10497767 | MS.gene26804:CDS |
| GATTTGAATCACCTGGTGAA+TGG | 0.474628 | 8.2:+10496438 | MS.gene26804:CDS |
| GACTGTGCAAATCCATAGTT+AGG | 0.475651 | 8.2:-10496638 | None:intergenic |
| ACTATGGATCTAATGCTAAT+GGG | 0.477126 | 8.2:+10497687 | MS.gene26804:CDS |
| AAAACATTATTCAGCTTTCG+AGG | 0.481363 | 8.2:-10499039 | None:intergenic |
| CCTCCTGCATGACCTTCTGT+CGG | 0.484140 | 8.2:-10498963 | None:intergenic |
| ATGGGGCAAAACATTTCCAT+TGG | 0.484243 | 8.2:-10497618 | None:intergenic |
| TTAGGTGTGTAATATACATA+AGG | 0.485977 | 8.2:-10496620 | None:intergenic |
| ACCGAAAAGAAAAGAAAGAT+AGG | 0.487885 | 8.2:-10498094 | None:intergenic |
| TGTGCAGATAATGTATAGAA+AGG | 0.489425 | 8.2:+10498864 | MS.gene26804:intron |
| ATTTGAATCACCTGGTGAAT+GGG | 0.489938 | 8.2:+10496439 | MS.gene26804:CDS |
| CCCCATCATAATCAATTCAA+AGG | 0.497677 | 8.2:+10497635 | MS.gene26804:CDS |
| AAAACTAAGTTTCTAATGAA+GGG | 0.499233 | 8.2:+10498988 | MS.gene26804:CDS |
| TTCATCCACAGATGTAGTGC+TGG | 0.503907 | 8.2:-10499172 | None:intergenic |
| GAACTTGTCTGATTTGATGA+TGG | 0.508845 | 8.2:-10496932 | None:intergenic |
| AAAACCTATACAGCAAAGTC+AGG | 0.510427 | 8.2:+10497842 | MS.gene26804:CDS |
| GAACTATGATGAAAATTGTC+TGG | 0.512526 | 8.2:-10496800 | None:intergenic |
| TGTATACCTCTTGTGTGTCT+CGG | 0.513829 | 8.2:-10498419 | None:intergenic |
| GATGCTAGGAGAAAAGCTAC+TGG | 0.514734 | 8.2:+10498055 | MS.gene26804:CDS |
| GGGGCCAAGAGCTAATGCTT+TGG | 0.515241 | 8.2:+10496973 | MS.gene26804:CDS |
| ACTTGATCCAAGATCTCTAC+AGG | 0.515937 | 8.2:+10499392 | MS.gene26804:CDS |
| GCATTAGCTCTTGGCCCCTC+GGG | 0.520251 | 8.2:-10496968 | None:intergenic |
| TGAACAAGAGGAATATAAGT+TGG | 0.522275 | 8.2:-10496776 | None:intergenic |
| GGAGCTGCCCCGTTGAGTAA+TGG | 0.524236 | 8.2:+10497656 | MS.gene26804:CDS |
| GTCAATAGACTTGATGGAAG+AGG | 0.526422 | 8.2:+10496854 | MS.gene26804:CDS |
| TTTCGAGGTGGCGCCAACAC+TGG | 0.533894 | 8.2:-10499024 | None:intergenic |
| TCCTTCCTCAGGGTACCCGA+GGG | 0.534598 | 8.2:+10496953 | MS.gene26804:CDS |
| TTATCATGTGCCACTTTACA+GGG | 0.536336 | 8.2:-10498326 | None:intergenic |
| TTCCTTCCTCAGGGTACCCG+AGG | 0.539305 | 8.2:+10496952 | MS.gene26804:CDS |
| TGGTGGTCCTCCCATTCACC+AGG | 0.542526 | 8.2:-10496449 | None:intergenic |
| GTGCAGATAATGTATAGAAA+GGG | 0.542850 | 8.2:+10498865 | MS.gene26804:intron |
| ACCCGTAATTGGTGGGAGCA+GGG | 0.547180 | 8.2:-10496282 | None:intergenic |
| TGTGGAGTTGCTGAGATGGT+TGG | 0.557085 | 8.2:+10498243 | MS.gene26804:CDS |
| GGGTAAGCTTATTACCTGAT+GGG | 0.560408 | 8.2:-10497062 | None:intergenic |
| CCCAGTGATGTAAGTAGAAG+CGG | 0.560429 | 8.2:+10497752 | MS.gene26804:CDS |
| ACAATAAAACCCGTAATTGG+TGG | 0.560985 | 8.2:-10496290 | None:intergenic |
| TGTAGAGATCTTGGATCAAG+TGG | 0.562297 | 8.2:-10499390 | None:intergenic |
| TGCAGTTTCTTGTTTCCATG+AGG | 0.563498 | 8.2:-10498019 | None:intergenic |
| AATTTAAAGACAGATGAACT+TGG | 0.563613 | 8.2:+10499090 | MS.gene26804:CDS |
| TGGCTAGGATTTGAATCACC+TGG | 0.564541 | 8.2:+10496431 | MS.gene26804:intron |
| AAATTGTCTGGTTGAACAAG+AGG | 0.565932 | 8.2:-10496788 | None:intergenic |
| TATAAGTTGGCGAAGAAATG+GGG | 0.569498 | 8.2:-10496763 | None:intergenic |
| GTGTGGTCATCAACACCTCA+TGG | 0.572729 | 8.2:+10498004 | MS.gene26804:CDS |
| ATCGGGGCCCTAGAATTAGT+AGG | 0.574334 | 8.2:+10497798 | MS.gene26804:CDS |
| CCGCTTCTACTTACATCACT+GGG | 0.578603 | 8.2:-10497752 | None:intergenic |
| CCAATTGATGTTGTCACAGT+CGG | 0.582496 | 8.2:+10499303 | MS.gene26804:CDS |
| GTGGGAGCTTCCCTGTAAAG+TGG | 0.586968 | 8.2:+10498316 | MS.gene26804:CDS |
| AACTCCACAAAATTGACCGC+TGG | 0.588632 | 8.2:-10498229 | None:intergenic |
| CTCTGATCAACAATAAACTC+AGG | 0.590513 | 8.2:-10496250 | None:intergenic |
| AAGCTTATTACCTGATGGGA+AGG | 0.591653 | 8.2:-10497058 | None:intergenic |
| CAATAAAACCCGTAATTGGT+GGG | 0.592162 | 8.2:-10496289 | None:intergenic |
| AGTCACCATTACCCCAAGAC+AGG | 0.594914 | 8.2:+10499254 | MS.gene26804:CDS |
| CCCCTCGGGTACCCTGAGGA+AGG | 0.595318 | 8.2:-10496954 | None:intergenic |
| GATCCAAGATCTCTACAGGC+AGG | 0.595943 | 8.2:+10499396 | MS.gene26804:CDS |
| AAACCGACAGAAGGTCATGC+AGG | 0.599786 | 8.2:+10498960 | MS.gene26804:CDS |
| AATTGCTAAACTTCGACCAA+AGG | 0.600391 | 8.2:+10497718 | MS.gene26804:CDS |
| ACATACTTCAATTTCAAATG+CGG | 0.601687 | 8.2:+10499122 | MS.gene26804:CDS |
| AGATCTCTACAGGCAGGCAA+AGG | 0.607123 | 8.2:+10499402 | MS.gene26804:CDS |
| TTTCGTCTCTACCTGTCTTG+GGG | 0.609585 | 8.2:-10499265 | None:intergenic |
| TCAACTCCAATCATAGCACC+TGG | 0.611265 | 8.2:-10496689 | None:intergenic |
| GGCAGCAAGATAAATGGAGT+GGG | 0.612024 | 8.2:+10498298 | MS.gene26804:CDS |
| AGAGTGCTTATGAAGATGCT+AGG | 0.613434 | 8.2:+10498041 | MS.gene26804:CDS |
| TGAATCACCTGGTGAATGGG+AGG | 0.616103 | 8.2:+10496442 | MS.gene26804:CDS |
| TTCAAAGACATGTTTAACGA+AGG | 0.618250 | 8.2:+10496223 | None:intergenic |
| TTACTATGAAAACCGACAGA+AGG | 0.618618 | 8.2:+10498951 | MS.gene26804:CDS |
| CCTTTGAATTGATTATGATG+GGG | 0.619417 | 8.2:-10497635 | None:intergenic |
| TGTCACCAGCACTACATCTG+TGG | 0.635296 | 8.2:+10499167 | MS.gene26804:CDS |
| TGGCAGCAAGATAAATGGAG+TGG | 0.635971 | 8.2:+10498297 | MS.gene26804:CDS |
| TCAGACAAGTTCCTTCCTCA+GGG | 0.638045 | 8.2:+10496943 | MS.gene26804:CDS |
| TCAGAAAACCCATTACTCAA+CGG | 0.638768 | 8.2:-10497665 | None:intergenic |
| AATGGAAGTGTTCCTAACAG+TGG | 0.638957 | 8.2:+10497013 | MS.gene26804:CDS |
| TCAATGTAGGTTAATGCCAG+CGG | 0.649389 | 8.2:+10498213 | MS.gene26804:intron |
| ACATTATTCAGCTTTCGAGG+TGG | 0.659451 | 8.2:-10499036 | None:intergenic |
| AAAGCTACTGGAAAATCTGG+AGG | 0.667052 | 8.2:+10498067 | MS.gene26804:CDS |
| TGTTATAAAATCATACAGTG+AGG | 0.670580 | 8.2:+10497952 | MS.gene26804:CDS |
| GTAGAGATCTTGGATCAAGT+GGG | 0.673059 | 8.2:-10499389 | None:intergenic |
| TGGTCCTGATATTCAGTACA+CGG | 0.673378 | 8.2:+10496490 | MS.gene26804:CDS |
| TTGGCCCCTCGGGTACCCTG+AGG | 0.673523 | 8.2:-10496958 | None:intergenic |
| AAAGCATTAAATATAACGTG+TGG | 0.673580 | 8.2:+10497987 | MS.gene26804:CDS |
| TAACAGCCGAGACACACAAG+AGG | 0.680258 | 8.2:+10498413 | MS.gene26804:CDS |
| CCTTCCTCAGGGTACCCGAG+GGG | 0.684367 | 8.2:+10496954 | MS.gene26804:CDS |
| CCGACAGAAGGTCATGCAGG+AGG | 0.689597 | 8.2:+10498963 | MS.gene26804:CDS |
| TTATTGGGTGAACAAAATCG+GGG | 0.719539 | 8.2:+10497782 | MS.gene26804:CDS |
| TTATACTGATCAATATAACA+GGG | 0.725652 | 8.2:+10497892 | MS.gene26804:CDS |
| TACTGATCAATATAACAGGG+AGG | 0.738774 | 8.2:+10497895 | MS.gene26804:CDS |
| TGAAAAGGTTGAGAATGATG+CGG | 0.755410 | 8.2:+10499191 | MS.gene26804:CDS |
| AGAAAACCCATTACTCAACG+GGG | 0.769685 | 8.2:-10497663 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTATATACCTTTTAA+AGG | + | chr8.2:10498729-10498748 | MS.gene26804:intron | 15.0% |
| !! | AAAACTAAGTTTCTAATGAA+GGG | + | chr8.2:10498988-10499007 | MS.gene26804:CDS | 20.0% |
| !! | TTATACTGATCAATATAACA+GGG | + | chr8.2:10497892-10497911 | MS.gene26804:CDS | 20.0% |
| !! | TTTATACTGATCAATATAAC+AGG | + | chr8.2:10497891-10497910 | MS.gene26804:CDS | 20.0% |
| !!! | ATGGTACTTTTTTTATGAAA+AGG | + | chr8.2:10497361-10497380 | MS.gene26804:intron | 20.0% |
| !!! | TTTTCATAAAAAAAGTACCA+TGG | - | chr8.2:10497362-10497381 | None:intergenic | 20.0% |
| ! | AAATTAAGAAAACCACTGTT+AGG | - | chr8.2:10497028-10497047 | None:intergenic | 25.0% |
| ! | AAATTCCAATATAGCTCAAA+AGG | - | chr8.2:10497086-10497105 | None:intergenic | 25.0% |
| ! | AACCTACATTGAAAAAGAAA+GGG | - | chr8.2:10498205-10498224 | None:intergenic | 25.0% |
| ! | AATTCCAATATAGCTCAAAA+GGG | - | chr8.2:10497085-10497104 | None:intergenic | 25.0% |
| ! | AATTTAAAGACAGATGAACT+TGG | + | chr8.2:10499090-10499109 | MS.gene26804:CDS | 25.0% |
| ! | ACATACTTCAATTTCAAATG+CGG | + | chr8.2:10499122-10499141 | MS.gene26804:CDS | 25.0% |
| ! | ATTGTTCGAATTTGTGAATA+TGG | + | chr8.2:10498562-10498581 | MS.gene26804:intron | 25.0% |
| ! | GAAAACTAAGTTTCTAATGA+AGG | + | chr8.2:10498987-10499006 | MS.gene26804:CDS | 25.0% |
| ! | GTCAAAATTATATTAACAGC+AGG | - | chr8.2:10498824-10498843 | None:intergenic | 25.0% |
| ! | TAAAATTGATAAGTGTTCCT+GGG | + | chr8.2:10498473-10498492 | MS.gene26804:intron | 25.0% |
| ! | TAACCTACATTGAAAAAGAA+AGG | - | chr8.2:10498206-10498225 | None:intergenic | 25.0% |
| ! | TAGCAAGTTACTACTATTAT+AGG | + | chr8.2:10497327-10497346 | MS.gene26804:intron | 25.0% |
| ! | TAGCAATTTCATTGTCAATA+GGG | - | chr8.2:10497925-10497944 | None:intergenic | 25.0% |
| ! | TATTATTGGGTGAACAAAAT+CGG | + | chr8.2:10497780-10497799 | MS.gene26804:CDS | 25.0% |
| ! | TCCTTTGAATTGATTATGAT+GGG | - | chr8.2:10497639-10497658 | None:intergenic | 25.0% |
| ! | TGTTATAAAATCATACAGTG+AGG | + | chr8.2:10497952-10497971 | MS.gene26804:CDS | 25.0% |
| ! | TTAAAATTGATAAGTGTTCC+TGG | + | chr8.2:10498472-10498491 | MS.gene26804:intron | 25.0% |
| ! | TTAGCAATTTCATTGTCAAT+AGG | - | chr8.2:10497926-10497945 | None:intergenic | 25.0% |
| ! | TTAGGTGTGTAATATACATA+AGG | - | chr8.2:10496623-10496642 | None:intergenic | 25.0% |
| !! | AAAGCATTAAATATAACGTG+TGG | + | chr8.2:10497987-10498006 | MS.gene26804:CDS | 25.0% |
| !! | TCCTATCTTTCTTTTCTTTT+CGG | + | chr8.2:10498093-10498112 | MS.gene26804:CDS | 25.0% |
| !!! | TAAAAAAAGTACCATGGAAA+AGG | - | chr8.2:10497356-10497375 | None:intergenic | 25.0% |
| !!! | TACATAAGTTTTAGAAGTAC+AGG | - | chr8.2:10498145-10498164 | None:intergenic | 25.0% |
| !!! | TTATTAGTTTGTGAACTTTG+TGG | + | chr8.2:10497411-10497430 | MS.gene26804:intron | 25.0% |
| AAAAATAATCACCGTACCTT+TGG | + | chr8.2:10496325-10496344 | MS.gene26804:intron | 30.0% | |
| AAAACATTATTCAGCTTTCG+AGG | - | chr8.2:10499042-10499061 | None:intergenic | 30.0% | |
| AAACATGTCAAAAGCAAAAG+TGG | - | chr8.2:10497277-10497296 | None:intergenic | 30.0% | |
| AACATGTCAAAAGCAAAAGT+GGG | - | chr8.2:10497276-10497295 | None:intergenic | 30.0% | |
| ACCGAAAAGAAAAGAAAGAT+AGG | - | chr8.2:10498097-10498116 | None:intergenic | 30.0% | |
| ACTATGGATCTAATGCTAAT+GGG | + | chr8.2:10497687-10497706 | MS.gene26804:CDS | 30.0% | |
| ATATCCATATTGAAGTCAAC+AGG | - | chr8.2:10498270-10498289 | None:intergenic | 30.0% | |
| ATGATAAAAGATGTGCCAAA+TGG | + | chr8.2:10498342-10498361 | MS.gene26804:CDS | 30.0% | |
| ATGTGCCTAAAATTTCCATT+TGG | - | chr8.2:10498360-10498379 | None:intergenic | 30.0% | |
| ATTATTGGGTGAACAAAATC+GGG | + | chr8.2:10497781-10497800 | MS.gene26804:CDS | 30.0% | |
| CATAAGCTGGTAAAAAATGT+GGG | + | chr8.2:10498752-10498771 | MS.gene26804:intron | 30.0% | |
| CATCTACACCAAAAATTCTA+TGG | - | chr8.2:10496472-10496491 | None:intergenic | 30.0% | |
| CCTTTGAATTGATTATGATG+GGG | - | chr8.2:10497638-10497657 | None:intergenic | 30.0% | |
| CTCCTTTGAATTGATTATGA+TGG | - | chr8.2:10497640-10497659 | None:intergenic | 30.0% | |
| GAACTATGATGAAAATTGTC+TGG | - | chr8.2:10496803-10496822 | None:intergenic | 30.0% | |
| GAATAGTGTGTTTATATGGA+AGG | + | chr8.2:10497213-10497232 | MS.gene26804:intron | 30.0% | |
| GTATATTACACACCTAACTA+TGG | + | chr8.2:10496626-10496645 | MS.gene26804:CDS | 30.0% | |
| GTGCAGATAATGTATAGAAA+GGG | + | chr8.2:10498865-10498884 | MS.gene26804:intron | 30.0% | |
| TACTCAATTGTTTCCTAACA+AGG | - | chr8.2:10498593-10498612 | None:intergenic | 30.0% | |
| TCAACTAAAAACTTGCATGT+CGG | - | chr8.2:10498510-10498529 | None:intergenic | 30.0% | |
| TGAACAAGAGGAATATAAGT+TGG | - | chr8.2:10496779-10496798 | None:intergenic | 30.0% | |
| TGTACAATAAAACCCGTAAT+TGG | - | chr8.2:10496296-10496315 | None:intergenic | 30.0% | |
| TGTCTCAATGATGTAAATGT+TGG | + | chr8.2:10498695-10498714 | MS.gene26804:intron | 30.0% | |
| TGTGCAGATAATGTATAGAA+AGG | + | chr8.2:10498864-10498883 | MS.gene26804:intron | 30.0% | |
| TTACATCATTGAGACAATCA+AGG | - | chr8.2:10498691-10498710 | None:intergenic | 30.0% | |
| TTGTTAGGAAACAATTGAGT+AGG | + | chr8.2:10498592-10498611 | MS.gene26804:intron | 30.0% | |
| ! | AAATGCTTCTATCTTTTCCA+GGG | + | chr8.2:10496578-10496597 | MS.gene26804:intron | 30.0% |
| ! | AAATTTTTCTCATCACTTGC+AGG | - | chr8.2:10499075-10499094 | None:intergenic | 30.0% |
| ! | AAGTTTCTAATGAAGGGTTT+TGG | + | chr8.2:10498994-10499013 | MS.gene26804:CDS | 30.0% |
| ! | AATATAAGTTGGCGAAGAAA+TGG | - | chr8.2:10496768-10496787 | None:intergenic | 30.0% |
| ! | AATTGTGTTGTTGTATTTGC+TGG | + | chr8.2:10497464-10497483 | MS.gene26804:intron | 30.0% |
| ! | ATAGCTATATTTTCCTTCTG+TGG | + | chr8.2:10497544-10497563 | MS.gene26804:intron | 30.0% |
| ! | ATATAAGTTGGCGAAGAAAT+GGG | - | chr8.2:10496767-10496786 | None:intergenic | 30.0% |
| ! | ATGTGCCAAATGGAAATTTT+AGG | + | chr8.2:10498352-10498371 | MS.gene26804:CDS | 30.0% |
| ! | GTGTTTATATGGAAGGATTT+TGG | + | chr8.2:10497220-10497239 | MS.gene26804:intron | 30.0% |
| ! | TAAATGCTTCTATCTTTTCC+AGG | + | chr8.2:10496577-10496596 | MS.gene26804:intron | 30.0% |
| ! | TAAGGATTGTATGGATTGTA+TGG | - | chr8.2:10496665-10496684 | None:intergenic | 30.0% |
| ! | TTTTATGAAAAGGACATGCT+TGG | + | chr8.2:10497371-10497390 | MS.gene26804:intron | 30.0% |
| !! | AAAGGTACGGTGATTATTTT+TGG | - | chr8.2:10496326-10496345 | None:intergenic | 30.0% |
| !! | AAATGGGGTTTTGATAATTG+GGG | - | chr8.2:10496751-10496770 | None:intergenic | 30.0% |
| !! | AGAAATGGGGTTTTGATAAT+TGG | - | chr8.2:10496753-10496772 | None:intergenic | 30.0% |
| !! | ATTTCTTCTGTTCTGAAGAT+TGG | + | chr8.2:10499228-10499247 | MS.gene26804:CDS | 30.0% |
| !! | CTTTTGCTTTTGACATGTTT+AGG | + | chr8.2:10497277-10497296 | MS.gene26804:intron | 30.0% |
| !! | GAAATGGGGTTTTGATAATT+GGG | - | chr8.2:10496752-10496771 | None:intergenic | 30.0% |
| !! | TCAATTGGTTCTGTATTAGA+TGG | - | chr8.2:10499291-10499310 | None:intergenic | 30.0% |
| !! | TGTTGACTTCAATATGGATA+TGG | + | chr8.2:10498269-10498288 | MS.gene26804:CDS | 30.0% |
| !! | TTTGCTGGCTTGTTTATATA+TGG | + | chr8.2:10497479-10497498 | MS.gene26804:intron | 30.0% |
| !! | TTTGCTGTATAGGTTTTGAT+AGG | - | chr8.2:10497839-10497858 | None:intergenic | 30.0% |
| !!! | AATTACGGGTTTTATTGTAC+AGG | + | chr8.2:10496295-10496314 | MS.gene26804:CDS | 30.0% |
| !!! | CATAGAATTTTTGGTGTAGA+TGG | + | chr8.2:10496470-10496489 | MS.gene26804:CDS | 30.0% |
| !!! | TCTGTAGATACTTTTTCCAA+TGG | + | chr8.2:10497602-10497621 | MS.gene26804:CDS | 30.0% |
| AAAACCTATACAGCAAAGTC+AGG | + | chr8.2:10497842-10497861 | MS.gene26804:CDS | 35.0% | |
| AAATTGTCTGGTTGAACAAG+AGG | - | chr8.2:10496791-10496810 | None:intergenic | 35.0% | |
| AATTATGTGTGCATGCGATT+AGG | - | chr8.2:10498632-10498651 | None:intergenic | 35.0% | |
| AATTGCTAAACTTCGACCAA+AGG | + | chr8.2:10497718-10497737 | MS.gene26804:CDS | 35.0% | |
| ACAATAAAACCCGTAATTGG+TGG | - | chr8.2:10496293-10496312 | None:intergenic | 35.0% | |
| ACATGTCAAAAGCAAAAGTG+GGG | - | chr8.2:10497275-10497294 | None:intergenic | 35.0% | |
| AGAAAAGCTACTGGAAAATC+TGG | + | chr8.2:10498064-10498083 | MS.gene26804:CDS | 35.0% | |
| AGAAGCGGTGATGTATTATT+GGG | + | chr8.2:10497767-10497786 | MS.gene26804:CDS | 35.0% | |
| ATCATAGCACCTGGAATATA+AGG | - | chr8.2:10496683-10496702 | None:intergenic | 35.0% | |
| ATTATCTGCACATGAGGAAT+GGG | - | chr8.2:10498856-10498875 | None:intergenic | 35.0% | |
| ATTTGAATCACCTGGTGAAT+GGG | + | chr8.2:10496439-10496458 | MS.gene26804:CDS | 35.0% | |
| CAATAAAACCCGTAATTGGT+GGG | - | chr8.2:10496292-10496311 | None:intergenic | 35.0% | |
| CCATACAATCCTTATATTCC+AGG | + | chr8.2:10496671-10496690 | MS.gene26804:CDS | 35.0% | |
| CCCCATCATAATCAATTCAA+AGG | + | chr8.2:10497635-10497654 | MS.gene26804:CDS | 35.0% | |
| CCTGGAATATAAGGATTGTA+TGG | - | chr8.2:10496674-10496693 | None:intergenic | 35.0% | |
| CTACACCAAAAATTCTATGG+TGG | - | chr8.2:10496469-10496488 | None:intergenic | 35.0% | |
| CTATACATTATCTGCACATG+AGG | - | chr8.2:10498862-10498881 | None:intergenic | 35.0% | |
| CTCTGATCAACAATAAACTC+AGG | - | chr8.2:10496253-10496272 | None:intergenic | 35.0% | |
| GACTATGGATCTAATGCTAA+TGG | + | chr8.2:10497686-10497705 | MS.gene26804:CDS | 35.0% | |
| GATAATGTATAGAAAGGGTC+TGG | + | chr8.2:10498870-10498889 | MS.gene26804:intron | 35.0% | |
| GCAAAGAAAGATTCGACAAA+TGG | + | chr8.2:10496995-10497014 | MS.gene26804:CDS | 35.0% | |
| GCATAAGCTGGTAAAAAATG+TGG | + | chr8.2:10498751-10498770 | MS.gene26804:intron | 35.0% | |
| GCTGGAATAGTGTGTTTATA+TGG | + | chr8.2:10497209-10497228 | MS.gene26804:intron | 35.0% | |
| GTACACGATATATGATCAAC+CGG | - | chr8.2:10496365-10496384 | None:intergenic | 35.0% | |
| TACCAGCTTATGCCTTTAAA+AGG | - | chr8.2:10498744-10498763 | None:intergenic | 35.0% | |
| TACTGATCAATATAACAGGG+AGG | + | chr8.2:10497895-10497914 | MS.gene26804:CDS | 35.0% | |
| TAGAAGCGGTGATGTATTAT+TGG | + | chr8.2:10497766-10497785 | MS.gene26804:CDS | 35.0% | |
| TAGCCACAAAAAATACCAAG+TGG | - | chr8.2:10496417-10496436 | None:intergenic | 35.0% | |
| TATGACACACAAGACACATA+CGG | - | chr8.2:10496537-10496556 | None:intergenic | 35.0% | |
| TCAATATGGATATGGACTTC+TGG | + | chr8.2:10498277-10498296 | MS.gene26804:CDS | 35.0% | |
| TCAATGCAAGTCAGAGTTAA+TGG | + | chr8.2:10499327-10499346 | MS.gene26804:CDS | 35.0% | |
| TCAGAAAACCCATTACTCAA+CGG | - | chr8.2:10497668-10497687 | None:intergenic | 35.0% | |
| TGAAAAGGTTGAGAATGATG+CGG | + | chr8.2:10499191-10499210 | MS.gene26804:CDS | 35.0% | |
| TGTCTTGTGTGTCATATGTT+GGG | + | chr8.2:10496541-10496560 | MS.gene26804:intron | 35.0% | |
| TTACTATGAAAACCGACAGA+AGG | + | chr8.2:10498951-10498970 | MS.gene26804:CDS | 35.0% | |
| TTATTGGGTGAACAAAATCG+GGG | + | chr8.2:10497782-10497801 | MS.gene26804:CDS | 35.0% | |
| ! | AAAGTGTTATCAATGGCAGA+AGG | - | chr8.2:10497246-10497265 | None:intergenic | 35.0% |
| ! | ATTATAGGTCACCTTTTCCA+TGG | + | chr8.2:10497342-10497361 | MS.gene26804:intron | 35.0% |
| ! | CTTACCCTTTTGAGCTATAT+TGG | + | chr8.2:10497078-10497097 | MS.gene26804:intron | 35.0% |
| ! | GAACTTGTCTGATTTGATGA+TGG | - | chr8.2:10496935-10496954 | None:intergenic | 35.0% |
| ! | GAAGCATTTAAATCAGCTGT+CGG | - | chr8.2:10496567-10496586 | None:intergenic | 35.0% |
| ! | GCTTGACAAAGTGTTATCAA+TGG | - | chr8.2:10497253-10497272 | None:intergenic | 35.0% |
| ! | TATAAGTTGGCGAAGAAATG+GGG | - | chr8.2:10496766-10496785 | None:intergenic | 35.0% |
| ! | TATATTCCAGGTGCTATGAT+TGG | + | chr8.2:10496683-10496702 | MS.gene26804:CDS | 35.0% |
| ! | TTGATAGGCAGATGATGTTT+TGG | - | chr8.2:10497824-10497843 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTGTGGTATTGT+AGG | + | chr8.2:10497553-10497572 | MS.gene26804:intron | 35.0% |
| !! | AATGGATTTTCTGAGTCTTC+TGG | + | chr8.2:10499345-10499364 | MS.gene26804:CDS | 35.0% |
| !! | ATTGGAGTTGATGGTTCATT+TGG | + | chr8.2:10496701-10496720 | MS.gene26804:CDS | 35.0% |
| !! | GTTTTGGCCTACTAATTCTA+GGG | - | chr8.2:10497808-10497827 | None:intergenic | 35.0% |
| !! | TACCTTTTAAAGGCATAAGC+TGG | + | chr8.2:10498739-10498758 | MS.gene26804:intron | 35.0% |
| !! | TGAGTCTTCTGGTGTTTTAA+AGG | + | chr8.2:10499356-10499375 | MS.gene26804:CDS | 35.0% |
| !! | TGGAAAAAGTATCTACAGAC+TGG | - | chr8.2:10497601-10497620 | None:intergenic | 35.0% |
| !! | TTATCATGTGCCACTTTACA+GGG | - | chr8.2:10498329-10498348 | None:intergenic | 35.0% |
| !! | TTTATCATGTGCCACTTTAC+AGG | - | chr8.2:10498330-10498349 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTATACCAGTGT+TGG | + | chr8.2:10499011-10499030 | MS.gene26804:CDS | 35.0% |
| !!! | ACTTGGTATTTTTTGTGGCT+AGG | + | chr8.2:10496416-10496435 | MS.gene26804:intron | 35.0% |
| !!! | AGTAATGGGTTTTCTGACTA+TGG | + | chr8.2:10497671-10497690 | MS.gene26804:CDS | 35.0% |
| !!! | CTTCTGGTGTTTTAAAGGTT+GGG | + | chr8.2:10499361-10499380 | MS.gene26804:CDS | 35.0% |
| !!! | GACCCTTTCTTTTTCAATGT+AGG | + | chr8.2:10498200-10498219 | MS.gene26804:intron | 35.0% |
| !!! | TCTTCTGGTGTTTTAAAGGT+TGG | + | chr8.2:10499360-10499379 | MS.gene26804:CDS | 35.0% |
| !!! | TGACCACTTGGTATTTTTTG+TGG | + | chr8.2:10496411-10496430 | MS.gene26804:intron | 35.0% |
| !!! | TGTTTTGGCCTACTAATTCT+AGG | - | chr8.2:10497809-10497828 | None:intergenic | 35.0% |
| AAACACACTATTCCAGCCTA+TGG | - | chr8.2:10497206-10497225 | None:intergenic | 40.0% | |
| AAAGCTACTGGAAAATCTGG+AGG | + | chr8.2:10498067-10498086 | MS.gene26804:CDS | 40.0% | |
| AAGCTTATTACCTGATGGGA+AGG | - | chr8.2:10497061-10497080 | None:intergenic | 40.0% | |
| ACATTATTCAGCTTTCGAGG+TGG | - | chr8.2:10499039-10499058 | None:intergenic | 40.0% | |
| ACTTCTGGCAGCAAGATAAA+TGG | + | chr8.2:10498292-10498311 | MS.gene26804:CDS | 40.0% | |
| ACTTGATCCAAGATCTCTAC+AGG | + | chr8.2:10499392-10499411 | MS.gene26804:CDS | 40.0% | |
| AGAAAACCCATTACTCAACG+GGG | - | chr8.2:10497666-10497685 | None:intergenic | 40.0% | |
| AGGGTAAGCTTATTACCTGA+TGG | - | chr8.2:10497066-10497085 | None:intergenic | 40.0% | |
| ATGAAAAGGACATGCTTGGA+GGG | + | chr8.2:10497375-10497394 | MS.gene26804:intron | 40.0% | |
| ATGACACACAAGACACATAC+GGG | - | chr8.2:10496536-10496555 | None:intergenic | 40.0% | |
| ATGGGGCAAAACATTTCCAT+TGG | - | chr8.2:10497621-10497640 | None:intergenic | 40.0% | |
| CAAACGCAGTTTGTCAAAAG+AGG | + | chr8.2:10497159-10497178 | MS.gene26804:intron | 40.0% | |
| CACTACATCTGTGGATGAAA+AGG | + | chr8.2:10499176-10499195 | MS.gene26804:CDS | 40.0% | |
| CAGAAAACCCATTACTCAAC+GGG | - | chr8.2:10497667-10497686 | None:intergenic | 40.0% | |
| CAGTATGACTAATCGAAGGA+AGG | - | chr8.2:10498181-10498200 | None:intergenic | 40.0% | |
| CATGAGGAATGGGTATTTGA+TGG | - | chr8.2:10498846-10498865 | None:intergenic | 40.0% | |
| CATTATCTGCACATGAGGAA+TGG | - | chr8.2:10498857-10498876 | None:intergenic | 40.0% | |
| CCAATTGATGTTGTCACAGT+CGG | + | chr8.2:10499303-10499322 | MS.gene26804:CDS | 40.0% | |
| GACTGTGCAAATCCATAGTT+AGG | - | chr8.2:10496641-10496660 | None:intergenic | 40.0% | |
| GATTTGAATCACCTGGTGAA+TGG | + | chr8.2:10496438-10496457 | MS.gene26804:CDS | 40.0% | |
| GCTTCTGTCAATAGACTTGA+TGG | + | chr8.2:10496848-10496867 | MS.gene26804:CDS | 40.0% | |
| GGGTAAGCTTATTACCTGAT+GGG | - | chr8.2:10497065-10497084 | None:intergenic | 40.0% | |
| GTAGAGATCTTGGATCAAGT+GGG | - | chr8.2:10499392-10499411 | None:intergenic | 40.0% | |
| GTCAATAGACTTGATGGAAG+AGG | + | chr8.2:10496854-10496873 | MS.gene26804:CDS | 40.0% | |
| GTGTCTTGTGTGTCATATGT+TGG | + | chr8.2:10496540-10496559 | MS.gene26804:intron | 40.0% | |
| TATGAAAAGGACATGCTTGG+AGG | + | chr8.2:10497374-10497393 | MS.gene26804:intron | 40.0% | |
| TCAATGTAGGTTAATGCCAG+CGG | + | chr8.2:10498213-10498232 | MS.gene26804:intron | 40.0% | |
| TGGTCCTGATATTCAGTACA+CGG | + | chr8.2:10496490-10496509 | MS.gene26804:CDS | 40.0% | |
| TGTAGAGATCTTGGATCAAG+TGG | - | chr8.2:10499393-10499412 | None:intergenic | 40.0% | |
| TGTATACCTCTTGTGTGTCT+CGG | - | chr8.2:10498422-10498441 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTATGAAGATGCT+AGG | + | chr8.2:10498041-10498060 | MS.gene26804:CDS | 40.0% |
| ! | ATCTCCTGACTTTGCTGTAT+AGG | - | chr8.2:10497849-10497868 | None:intergenic | 40.0% |
| ! | ATTTTGTGGAGTTGCTGAGA+TGG | + | chr8.2:10498239-10498258 | MS.gene26804:CDS | 40.0% |
| ! | CTCTTTTGACAAACTGCGTT+TGG | - | chr8.2:10497161-10497180 | None:intergenic | 40.0% |
| ! | GAGGACCACCATAGAATTTT+TGG | + | chr8.2:10496461-10496480 | MS.gene26804:CDS | 40.0% |
| ! | TATGCACTGTATTGACCACT+TGG | + | chr8.2:10496399-10496418 | MS.gene26804:intron | 40.0% |
| ! | TGCAGTTTCTTGTTTCCATG+AGG | - | chr8.2:10498022-10498041 | None:intergenic | 40.0% |
| ! | TTTGCCAAAGCATTAGCTCT+TGG | - | chr8.2:10496980-10496999 | None:intergenic | 40.0% |
| !! | AATGGAAGTGTTCCTAACAG+TGG | + | chr8.2:10497013-10497032 | MS.gene26804:CDS | 40.0% |
| !! | AATGTGGGTTCATCGACTTT+AGG | + | chr8.2:10498767-10498786 | MS.gene26804:intron | 40.0% |
| !! | GAATATGGTGTTGCCTTGTT+AGG | + | chr8.2:10498577-10498596 | MS.gene26804:intron | 40.0% |
| !! | TGGTCCTGTTGACTTCAATA+TGG | + | chr8.2:10498263-10498282 | MS.gene26804:CDS | 40.0% |
| AACTCCACAAAATTGACCGC+TGG | - | chr8.2:10498232-10498251 | None:intergenic | 45.0% | |
| AACTTTCATCTTGTGCACCC+TGG | - | chr8.2:10496598-10496617 | None:intergenic | 45.0% | |
| AATCACCGTACCTTTGGCAT+TGG | + | chr8.2:10496331-10496350 | MS.gene26804:intron | 45.0% | |
| ACCGCTTCTACTTACATCAC+TGG | - | chr8.2:10497756-10497775 | None:intergenic | 45.0% | |
| ACTATTCCAGCCTATGGCTA+TGG | - | chr8.2:10497200-10497219 | None:intergenic | 45.0% | |
| ATCACCGTACCTTTGGCATT+GGG | + | chr8.2:10496332-10496351 | MS.gene26804:intron | 45.0% | |
| ATCAGACAAGTTCCTTCCTC+AGG | + | chr8.2:10496942-10496961 | MS.gene26804:CDS | 45.0% | |
| CCCAGTGATGTAAGTAGAAG+CGG | + | chr8.2:10497752-10497771 | MS.gene26804:CDS | 45.0% | |
| CCGACTGTGACAACATCAAT+TGG | - | chr8.2:10499306-10499325 | None:intergenic | 45.0% | |
| CCGCTTCTACTTACATCACT+GGG | - | chr8.2:10497755-10497774 | None:intergenic | 45.0% | |
| CTAGCCTACAATACCACAGA+AGG | - | chr8.2:10497560-10497579 | None:intergenic | 45.0% | |
| CTCACCGTGTACTGAATATC+AGG | - | chr8.2:10496497-10496516 | None:intergenic | 45.0% | |
| GATGCTAGGAGAAAAGCTAC+TGG | + | chr8.2:10498055-10498074 | MS.gene26804:CDS | 45.0% | |
| GGCAGCAAGATAAATGGAGT+GGG | + | chr8.2:10498298-10498317 | MS.gene26804:CDS | 45.0% | |
| GGGTCAGTATGACTAATCGA+AGG | - | chr8.2:10498185-10498204 | None:intergenic | 45.0% | |
| GTTTCGTCTCTACCTGTCTT+GGG | - | chr8.2:10499269-10499288 | None:intergenic | 45.0% | |
| TCAACTCCAATCATAGCACC+TGG | - | chr8.2:10496692-10496711 | None:intergenic | 45.0% | |
| TCAGACAAGTTCCTTCCTCA+GGG | + | chr8.2:10496943-10496962 | MS.gene26804:CDS | 45.0% | |
| TGGCAGCAAGATAAATGGAG+TGG | + | chr8.2:10498297-10498316 | MS.gene26804:CDS | 45.0% | |
| TGGCTAGGATTTGAATCACC+TGG | + | chr8.2:10496431-10496450 | MS.gene26804:intron | 45.0% | |
| TTCATCCACAGATGTAGTGC+TGG | - | chr8.2:10499175-10499194 | None:intergenic | 45.0% | |
| TTTCGTCTCTACCTGTCTTG+GGG | - | chr8.2:10499268-10499287 | None:intergenic | 45.0% | |
| ! | AATGCCAGCGGTCAATTTTG+TGG | + | chr8.2:10498225-10498244 | MS.gene26804:CDS | 45.0% |
| ! | GGTGCTATGATTGGAGTTGA+TGG | + | chr8.2:10496692-10496711 | MS.gene26804:CDS | 45.0% |
| ! | TGTCGGTTATAAATGCTCCC+AGG | - | chr8.2:10498493-10498512 | None:intergenic | 45.0% |
| ! | TTTGGCATTGGGGTTGAATC+CGG | + | chr8.2:10496343-10496362 | MS.gene26804:intron | 45.0% |
| !! | GGAGTTGATGGTTCATTTGG+AGG | + | chr8.2:10496704-10496723 | MS.gene26804:CDS | 45.0% |
| !! | GGGGTTTTGATAATTGGGGA+GGG | - | chr8.2:10496747-10496766 | None:intergenic | 45.0% |
| !! | TGGGGTTTTGATAATTGGGG+AGG | - | chr8.2:10496748-10496767 | None:intergenic | 45.0% |
| !! | TGGGTTCATCGACTTTAGGA+GGG | + | chr8.2:10498771-10498790 | MS.gene26804:intron | 45.0% |
| !!! | CAGCTTCTGCTGCTTTTACT+AGG | + | chr8.2:10496897-10496916 | MS.gene26804:CDS | 45.0% |
| AAACCGACAGAAGGTCATGC+AGG | + | chr8.2:10498960-10498979 | MS.gene26804:CDS | 50.0% | |
| AGATCTCTACAGGCAGGCAA+AGG | + | chr8.2:10499402-10499421 | MS.gene26804:CDS | 50.0% | |
| AGTCACCATTACCCCAAGAC+AGG | + | chr8.2:10499254-10499273 | MS.gene26804:CDS | 50.0% | |
| ATCGGGGCCCTAGAATTAGT+AGG | + | chr8.2:10497798-10497817 | MS.gene26804:CDS | 50.0% | |
| CAACCCCAATGCCAAAGGTA+CGG | - | chr8.2:10496339-10496358 | None:intergenic | 50.0% | |
| CTCTACCTGTCTTGGGGTAA+TGG | - | chr8.2:10499262-10499281 | None:intergenic | 50.0% | |
| CTGGGAGCAACATGAACCTT+TGG | - | chr8.2:10497737-10497756 | None:intergenic | 50.0% | |
| GACAAACTGCGTTTGGCAGA+TGG | - | chr8.2:10497154-10497173 | None:intergenic | 50.0% | |
| GATCCAAGATCTCTACAGGC+AGG | + | chr8.2:10499396-10499415 | MS.gene26804:CDS | 50.0% | |
| GGATTCAACCCCAATGCCAA+AGG | - | chr8.2:10496344-10496363 | None:intergenic | 50.0% | |
| GGTTTCGTCTCTACCTGTCT+TGG | - | chr8.2:10499270-10499289 | None:intergenic | 50.0% | |
| GTGTCTCGGCTGTTAGTTAC+AGG | - | chr8.2:10498408-10498427 | None:intergenic | 50.0% | |
| GTGTGGTCATCAACACCTCA+TGG | + | chr8.2:10498004-10498023 | MS.gene26804:CDS | 50.0% | |
| TAACAGCCGAGACACACAAG+AGG | + | chr8.2:10498413-10498432 | MS.gene26804:CDS | 50.0% | |
| TACCCTGCTCCCACCAATTA+CGG | + | chr8.2:10496280-10496299 | MS.gene26804:CDS | 50.0% | |
| TCACCGTACCTTTGGCATTG+GGG | + | chr8.2:10496333-10496352 | MS.gene26804:intron | 50.0% | |
| TGAATCACCTGGTGAATGGG+AGG | + | chr8.2:10496442-10496461 | MS.gene26804:CDS | 50.0% | |
| TGAGCATGTCAAGTCAGTGC+TGG | + | chr8.2:10497111-10497130 | MS.gene26804:intron | 50.0% | |
| TGCTTCATCACCTTCCCATC+AGG | + | chr8.2:10497048-10497067 | MS.gene26804:CDS | 50.0% | |
| TGTCACCAGCACTACATCTG+TGG | + | chr8.2:10499167-10499186 | MS.gene26804:CDS | 50.0% | |
| TGTGGAGTTGCTGAGATGGT+TGG | + | chr8.2:10498243-10498262 | MS.gene26804:CDS | 50.0% | |
| TTGCCTGCCTGTAGAGATCT+TGG | - | chr8.2:10499402-10499421 | None:intergenic | 50.0% | |
| TTGTCAAAAGAGGCCTGTCG+TGG | + | chr8.2:10497169-10497188 | MS.gene26804:intron | 50.0% | |
| ! | CTTTAGGAGGGTCTTCAGCT+TGG | + | chr8.2:10498783-10498802 | MS.gene26804:intron | 50.0% |
| !! | GTGGGTTCATCGACTTTAGG+AGG | + | chr8.2:10498770-10498789 | MS.gene26804:intron | 50.0% |
| AACCCGTAATTGGTGGGAGC+AGG | - | chr8.2:10496286-10496305 | None:intergenic | 55.0% | |
| ACCCGTAATTGGTGGGAGCA+GGG | - | chr8.2:10496285-10496304 | None:intergenic | 55.0% | |
| ACCCTGCTCCCACCAATTAC+GGG | + | chr8.2:10496281-10496300 | MS.gene26804:CDS | 55.0% | |
| CAAGACACATACGGGCAGAG+AGG | - | chr8.2:10496528-10496547 | None:intergenic | 55.0% | |
| CCTCCTGCATGACCTTCTGT+CGG | - | chr8.2:10498966-10498985 | None:intergenic | 55.0% | |
| GAGCTGCCCCGTTGAGTAAT+GGG | + | chr8.2:10497657-10497676 | MS.gene26804:CDS | 55.0% | |
| GGGGCCAAGAGCTAATGCTT+TGG | + | chr8.2:10496973-10496992 | MS.gene26804:CDS | 55.0% | |
| GTGGGAGCTTCCCTGTAAAG+TGG | + | chr8.2:10498316-10498335 | MS.gene26804:CDS | 55.0% | |
| ! | AGCATTAGCTCTTGGCCCCT+CGG | - | chr8.2:10496972-10496991 | None:intergenic | 55.0% |
| !! | ATGTCAAGTCAGTGCTGGCG+TGG | + | chr8.2:10497116-10497135 | MS.gene26804:intron | 55.0% |
| CCGACAGAAGGTCATGCAGG+AGG | + | chr8.2:10498963-10498982 | MS.gene26804:CDS | 60.0% | |
| CGTGGCAGTGCCATAGCCAT+AGG | + | chr8.2:10497187-10497206 | MS.gene26804:intron | 60.0% | |
| GCAGTGCCATAGCCATAGGC+TGG | + | chr8.2:10497191-10497210 | MS.gene26804:intron | 60.0% | |
| GGAGCTGCCCCGTTGAGTAA+TGG | + | chr8.2:10497656-10497675 | MS.gene26804:CDS | 60.0% | |
| TGGTGGTCCTCCCATTCACC+AGG | - | chr8.2:10496452-10496471 | None:intergenic | 60.0% | |
| TTTCGAGGTGGCGCCAACAC+TGG | - | chr8.2:10499027-10499046 | None:intergenic | 60.0% | |
| ! | GCATTAGCTCTTGGCCCCTC+GGG | - | chr8.2:10496971-10496990 | None:intergenic | 60.0% |
| ! | TCCTTCCTCAGGGTACCCGA+GGG | + | chr8.2:10496953-10496972 | MS.gene26804:CDS | 60.0% |
| ! | TTCCTTCCTCAGGGTACCCG+AGG | + | chr8.2:10496952-10496971 | MS.gene26804:CDS | 60.0% |
| GGCTATGGCACTGCCACGAC+AGG | - | chr8.2:10497185-10497204 | None:intergenic | 65.0% | |
| ! | CCTTCCTCAGGGTACCCGAG+GGG | + | chr8.2:10496954-10496973 | MS.gene26804:CDS | 65.0% |
| CCCCTCGGGTACCCTGAGGA+AGG | - | chr8.2:10496957-10496976 | None:intergenic | 70.0% | |
| TTGGCCCCTCGGGTACCCTG+AGG | - | chr8.2:10496961-10496980 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10496232 | 10499446 | 10496232 | ID=MS.gene26804 |
| chr8.2 | mRNA | 10496232 | 10499446 | 10496232 | ID=MS.gene26804.t1;Parent=MS.gene26804 |
| chr8.2 | exon | 10496232 | 10496316 | 10496232 | ID=MS.gene26804.t1.exon1;Parent=MS.gene26804.t1 |
| chr8.2 | CDS | 10496232 | 10496316 | 10496232 | ID=cds.MS.gene26804.t1;Parent=MS.gene26804.t1 |
| chr8.2 | exon | 10496438 | 10496511 | 10496438 | ID=MS.gene26804.t1.exon2;Parent=MS.gene26804.t1 |
| chr8.2 | CDS | 10496438 | 10496511 | 10496438 | ID=cds.MS.gene26804.t1;Parent=MS.gene26804.t1 |
| chr8.2 | exon | 10496599 | 10497069 | 10496599 | ID=MS.gene26804.t1.exon3;Parent=MS.gene26804.t1 |
| chr8.2 | CDS | 10496599 | 10497069 | 10496599 | ID=cds.MS.gene26804.t1;Parent=MS.gene26804.t1 |
| chr8.2 | exon | 10497575 | 10498114 | 10497575 | ID=MS.gene26804.t1.exon4;Parent=MS.gene26804.t1 |
| chr8.2 | CDS | 10497575 | 10498114 | 10497575 | ID=cds.MS.gene26804.t1;Parent=MS.gene26804.t1 |
| chr8.2 | exon | 10498222 | 10498434 | 10498222 | ID=MS.gene26804.t1.exon5;Parent=MS.gene26804.t1 |
| chr8.2 | CDS | 10498222 | 10498434 | 10498222 | ID=cds.MS.gene26804.t1;Parent=MS.gene26804.t1 |
| chr8.2 | exon | 10498871 | 10499446 | 10498871 | ID=MS.gene26804.t1.exon6;Parent=MS.gene26804.t1 |
| chr8.2 | CDS | 10498871 | 10499446 | 10498871 | ID=cds.MS.gene26804.t1;Parent=MS.gene26804.t1 |
| Gene Sequence |
| Protein sequence |
