AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67868

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67868.t1 MTR_2g032660 95.971 695 23 3 1 691 1 694 0.0 1360
MS.gene67868.t1 MTR_4g123630 67.121 660 199 10 37 687 1 651 0.0 864
MS.gene67868.t1 MTR_2g063460 64.502 231 69 2 307 532 320 542 1.24e-99 318
MS.gene67868.t1 MTR_2g063460 64.502 231 69 2 307 532 322 544 1.35e-99 318
MS.gene67868.t1 MTR_4g005110 38.550 524 269 15 46 532 54 561 5.64e-92 299
MS.gene67868.t1 MTR_8g088390 58.921 241 85 3 302 532 286 522 7.57e-88 287
MS.gene67868.t1 MTR_8g088390 58.921 241 85 3 302 532 351 587 1.59e-87 288
MS.gene67868.t1 MTR_7g085500 49.301 286 125 4 257 532 319 594 2.44e-81 271
MS.gene67868.t1 MTR_6g032970 53.101 258 100 4 289 532 318 568 2.84e-79 265
MS.gene67868.t1 MTR_2g005840 61.053 190 74 0 343 532 232 421 3.58e-77 255
MS.gene67868.t1 MTR_2g005840 61.053 190 74 0 343 532 263 452 1.45e-76 254
MS.gene67868.t1 MTR_2g032070 81.609 87 3 1 1 87 1 74 2.95e-42 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67868.t1 AT1G48110 47.872 658 307 13 36 677 1 638 0.0 555
MS.gene67868.t1 AT1G48110 47.872 658 307 13 36 677 1 638 0.0 555
MS.gene67868.t1 AT3G17330 42.415 679 264 20 37 679 1 588 4.17e-152 454
MS.gene67868.t1 AT3G17330 42.415 679 264 20 37 679 1 588 4.17e-152 454
MS.gene67868.t1 AT3G17330 48.009 427 171 9 281 679 83 486 1.20e-121 372
MS.gene67868.t1 AT3G13460 39.316 585 273 20 15 532 38 607 7.99e-95 307
MS.gene67868.t1 AT3G13460 39.316 585 273 20 15 532 39 608 8.63e-95 307
MS.gene67868.t1 AT3G13460 39.316 585 273 20 15 532 36 605 8.63e-95 307
MS.gene67868.t1 AT1G79270 68.500 200 60 1 337 533 278 477 5.97e-93 298
MS.gene67868.t1 AT1G79270 68.500 200 60 1 337 533 278 477 5.97e-93 298
MS.gene67868.t1 AT1G79270 68.500 200 60 1 337 533 278 477 5.97e-93 298
MS.gene67868.t1 AT1G79270 68.500 200 60 1 337 533 293 492 9.33e-93 298
MS.gene67868.t1 AT3G13060 60.256 234 80 3 303 532 340 564 5.02e-89 291
MS.gene67868.t1 AT3G13060 60.256 234 80 3 303 532 318 542 5.50e-89 290
MS.gene67868.t1 AT3G13060 60.256 234 80 3 303 532 318 542 5.50e-89 290
MS.gene67868.t1 AT3G13060 60.256 234 80 3 303 532 330 554 6.45e-89 291
MS.gene67868.t1 AT1G55500 54.508 244 101 2 289 526 279 518 1.92e-83 274
MS.gene67868.t1 AT1G55500 54.508 244 101 2 289 526 335 574 1.94e-83 275
MS.gene67868.t1 AT1G55500 54.508 244 101 2 289 526 292 531 2.51e-83 274
MS.gene67868.t1 AT1G55500 54.508 244 101 2 289 526 335 574 2.62e-83 275
MS.gene67868.t1 AT1G55500 54.508 244 101 2 289 526 322 561 3.47e-83 275
MS.gene67868.t1 AT1G55500 54.508 244 101 2 289 526 335 574 4.10e-83 275
MS.gene67868.t1 AT5G61020 55.000 240 97 3 302 534 192 427 9.64e-83 270
MS.gene67868.t1 AT5G61020 55.000 240 97 3 302 534 194 429 1.13e-82 270
MS.gene67868.t1 AT5G58190 54.217 249 101 5 287 532 255 493 4.24e-80 265
MS.gene67868.t1 AT5G58190 54.217 249 101 5 287 532 254 492 4.54e-80 265
MS.gene67868.t1 AT3G03950 54.918 244 101 3 289 532 173 407 4.99e-79 258
MS.gene67868.t1 AT3G03950 54.918 244 101 3 289 532 177 411 5.09e-79 259
MS.gene67868.t1 AT3G03950 54.918 244 101 3 289 532 174 408 5.42e-79 258
MS.gene67868.t1 AT1G27960 53.947 228 83 3 307 532 215 422 7.42e-77 254
MS.gene67868.t1 AT1G09810 56.019 216 91 1 343 554 170 385 9.36e-77 253
MS.gene67868.t1 AT1G09810 56.019 216 91 1 343 554 212 427 1.29e-76 254
MS.gene67868.t1 AT1G09810 56.019 216 91 1 343 554 193 408 1.98e-76 253
MS.gene67868.t1 AT1G27960 53.947 228 83 3 307 532 289 496 3.83e-76 254
MS.gene67868.t1 AT3G13060 56.682 217 77 4 303 511 340 547 2.33e-71 242
MS.gene67868.t1 AT3G13460 32.981 473 235 20 15 420 39 496 3.10e-33 134
MS.gene67868.t1 AT3G13060 48.361 122 50 3 303 420 340 452 8.60e-24 105
MS.gene67868.t1 AT1G27960 45.299 117 42 3 307 421 289 385 2.48e-20 94.7
MS.gene67868.t1 AT4G11970 29.747 158 95 3 362 514 72 218 1.58e-14 76.6
MS.gene67868.t1 AT4G11970 29.747 158 95 3 362 514 72 218 2.08e-14 75.9
MS.gene67868.t1 AT4G11970 29.747 158 95 3 362 514 72 218 2.46e-14 75.9
MS.gene67868.t1 AT4G11970 29.747 158 95 3 362 514 72 218 1.15e-13 74.3
MS.gene67868.t1 AT4G11970 29.747 158 95 3 362 514 72 218 1.15e-13 74.3

Find 147 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGGTTAGCTGGCTCTTC+TGG 0.117523 2.4:-57831654 MS.gene67868:CDS
TACCCTGCTTCCACCAATTA+TGG 0.150443 2.4:-57835077 MS.gene67868:CDS
TTGACACATGCAAATGTTTC+TGG 0.179968 2.4:-57834402 MS.gene67868:CDS
AGTATGATGTGCCTAAAATT+TGG 0.182955 2.4:+57833319 None:intergenic
GTATCTCTGCTATTAGTTAC+TGG 0.212229 2.4:+57833277 None:intergenic
ACTCCAGATTGTTCAAAGTT+TGG 0.250796 2.4:+57835146 None:intergenic
TGAATTCTTCTCATACTTGC+TGG 0.263385 2.4:+57831935 None:intergenic
TGGCTCTGTTGACTTTAATA+AGG 0.265086 2.4:-57833419 MS.gene67868:CDS
TCAGTGCCAGTTAAAGTTAA+TGG 0.268987 2.4:-57831672 MS.gene67868:CDS
TGCAACCTGCTTCGGGTTAA+TGG 0.270209 2.4:+57831749 None:intergenic
GCTAACCCATTAACTTTAAC+TGG 0.275132 2.4:+57831666 None:intergenic
CCGTATGTATATTACAACTA+TGG 0.288528 2.4:-57834771 MS.gene67868:CDS
ATGCTTTGATCAACAAATTC+AGG 0.293456 2.4:+57835104 None:intergenic
CTCCAGATTGTTCAAAGTTT+GGG 0.301535 2.4:+57835147 None:intergenic
TGTACAATAATACCCATAAT+TGG 0.317280 2.4:+57835064 None:intergenic
TTTATGATATGCCACTTAAC+AGG 0.319471 2.4:+57833355 None:intergenic
ATGGGTTAGCTGGCTCTTCT+GGG 0.325136 2.4:-57831653 MS.gene67868:CDS
CCAGGTATATACGGATTATA+TGG 0.326972 2.4:+57834726 None:intergenic
TCATTCACAGACTTGATGTT+TGG 0.330984 2.4:+57831834 None:intergenic
AAATTACCCAGTAAGCATTC+TGG 0.345258 2.4:+57835351 None:intergenic
CAAAAGTTCAATGAAGCTTC+TGG 0.348903 2.4:-57834525 MS.gene67868:CDS
GATCCTAGTCCTAGGGCCTT+TGG 0.349547 2.4:+57833977 None:intergenic
CTAGGAACCAGAATGCTTAC+TGG 0.356092 2.4:-57835358 MS.gene67868:CDS
CCTGTAGATACTATCTCTAA+TGG 0.362924 2.4:-57834106 MS.gene67868:CDS
ATGTGCCTAAAATTTGGATT+TGG 0.363738 2.4:+57833325 None:intergenic
CTCGTTACCACCTCCTACCT+TGG 0.368057 2.4:+57833856 None:intergenic
AGTTCTGCAAACTCCGTGTT+TGG 0.378137 2.4:-57834591 MS.gene67868:CDS
TTAATAAGGACATGGACTTT+TGG 0.378991 2.4:-57833405 MS.gene67868:CDS
CATTCACAGACTTGATGTTT+GGG 0.382329 2.4:+57831835 None:intergenic
CAGTGCCAGTTAAAGTTAAT+GGG 0.383647 2.4:-57831671 MS.gene67868:CDS
ACCCTGCTTCCACCAATTAT+GGG 0.384468 2.4:-57835076 MS.gene67868:CDS
ACCATGGCACCAGGTATATA+CGG 0.392677 2.4:+57834717 None:intergenic
AAAGCATTACAACCACAAAA+AGG 0.392730 2.4:-57831597 MS.gene67868:CDS
GAAACTTCTGATTAGGAGCT+TGG 0.393810 2.4:+57832025 None:intergenic
ACGGAGTTTGCAGAACTATC+AGG 0.395503 2.4:+57834597 None:intergenic
TGAACCTATCTTTAAGATAG+AGG 0.398400 2.4:+57831776 None:intergenic
GCCAATGCTGGTATGAATAC+TGG 0.398898 2.4:+57831996 None:intergenic
GTGTGGTCTTCTACAGTTCA+TGG 0.411680 2.4:-57833704 MS.gene67868:CDS
TAAGAATGTCAAGTTGTTCT+CGG 0.421487 2.4:+57831703 None:intergenic
CATCACTTGATCCTAGTCCT+AGG 0.422765 2.4:+57833969 None:intergenic
AGCATCATCTGCTGTTCATC+AGG 0.423199 2.4:-57834361 MS.gene67868:intron
TACGGATTATATGGATTGTA+TGG 0.425791 2.4:+57834735 None:intergenic
GGAAATCCTCCTTGTTGTAT+TGG 0.428102 2.4:+57833807 None:intergenic
GAATTCTTCTCATACTTGCT+GGG 0.432505 2.4:+57831936 None:intergenic
CTCACCGTGTACTGGACATC+TGG 0.433997 2.4:+57834887 None:intergenic
TCTTCTGGGTTCTTGAAAGT+TGG 0.434025 2.4:-57831639 MS.gene67868:CDS
AGCCCAAACTTTGAACAATC+TGG 0.434855 2.4:-57835149 MS.gene67868:CDS
TACCCATAATTGGTGGAAGC+AGG 0.435738 2.4:+57835074 None:intergenic
GTAGGAGTTGATGGCTCATA+TGG 0.439213 2.4:-57834696 MS.gene67868:CDS
CTGTAGATACTATCTCTAAT+GGG 0.443517 2.4:-57834105 MS.gene67868:CDS
AAATGTTAGTGCTGATGTAT+TGG 0.445062 2.4:-57833945 MS.gene67868:CDS
GTTCTGCTCAGAATTTGAAA+TGG 0.453546 2.4:+57831875 None:intergenic
CCCTTCTGATACCATGGCCT+CGG 0.454290 2.4:+57834455 None:intergenic
GGTGCCATGGTAGGAGTTGA+TGG 0.455986 2.4:-57834705 MS.gene67868:CDS
GATAATGTATTCTAAAGGAT+TGG 0.459236 2.4:-57832147 MS.gene67868:CDS
TGTGGAGTTGCAGAGATGAT+TGG 0.464797 2.4:-57833439 MS.gene67868:CDS
AGGCCAAAGGCCCTAGGACT+AGG 0.465607 2.4:-57833980 MS.gene67868:CDS
GTTAAAGTTAATGGGTTAGC+TGG 0.467289 2.4:-57831663 MS.gene67868:CDS
GATTCGAATCACCCGGTGAA+TGG 0.467931 2.4:-57834943 MS.gene67868:CDS
TTCCTCCCATTGTTAGCTCT+CGG 0.469671 2.4:+57834432 None:intergenic
AATTATGGGTATTATTGTAC+AGG 0.476299 2.4:-57835062 MS.gene67868:intron
ATACTGGTCCTCCCATTCAC+CGG 0.477464 2.4:+57834931 None:intergenic
GCAAGTATGAGAAGAATTCA+AGG 0.480414 2.4:-57831932 MS.gene67868:CDS
AGTTCATGGAAACAAGAAGT+TGG 0.483158 2.4:-57833690 MS.gene67868:CDS
ATTCGAATCACCCGGTGAAT+GGG 0.484015 2.4:-57834942 MS.gene67868:CDS
TGCTTTGATCAACAAATTCA+GGG 0.484315 2.4:+57835105 None:intergenic
TAGTCAGACTCACCGTGTAC+TGG 0.484610 2.4:+57834879 None:intergenic
CAGGTTGCAGCAAAACAATC+TGG 0.488120 2.4:-57831735 MS.gene67868:CDS
GTTCATGGAAACAAGAAGTT+GGG 0.488312 2.4:-57833689 MS.gene67868:CDS
GTGGAAGCTTTCCTGTTAAG+TGG 0.491998 2.4:-57833366 MS.gene67868:CDS
ATCCTCCTTGTTGTATTGGT+CGG 0.502648 2.4:+57833811 None:intergenic
ACAACAATATTCAACTTTCG+AGG 0.503642 2.4:+57831969 None:intergenic
AATGTTAGTGCTGATGTATT+GGG 0.510099 2.4:-57833944 MS.gene67868:CDS
TGAACAAGGGGATCATAAGC+AGG 0.511266 2.4:+57834633 None:intergenic
ATCTCCTCTATCTTAAAGAT+AGG 0.511747 2.4:-57831780 MS.gene67868:CDS
TTTCGAGGAGGTGCCAATGC+TGG 0.512758 2.4:+57831984 None:intergenic
CCATATAATCCGTATATACC+TGG 0.512895 2.4:-57834726 MS.gene67868:CDS
GAAGTTGGGAAATGCTTATG+AGG 0.513881 2.4:-57833675 MS.gene67868:CDS
AATCGCCATTAACCCGAAGC+AGG 0.514583 2.4:-57831754 MS.gene67868:CDS
TCCAGTATTCATACCAGCAT+TGG 0.514740 2.4:-57831997 MS.gene67868:CDS
ATCACTTGATCCTAGTCCTA+GGG 0.516411 2.4:+57833970 None:intergenic
ATGCAAATGTTTCTGGAAGC+AGG 0.519305 2.4:-57834395 MS.gene67868:CDS
TCAAACAAGTTCCGAGGCCA+TGG 0.528567 2.4:-57834466 MS.gene67868:CDS
CCATTAGAGATAGTATCTAC+AGG 0.528741 2.4:+57834106 None:intergenic
ATAGTAGCTTCTTCACGAAG+TGG 0.535163 2.4:-57834055 MS.gene67868:CDS
TGGCAGATAATGTATTCTAA+AGG 0.535367 2.4:-57832152 MS.gene67868:intron
ACCCATAATTGGTGGAAGCA+GGG 0.538655 2.4:+57835075 None:intergenic
GTGAATGGGAGGACCAGTAT+AGG 0.542108 2.4:-57834928 MS.gene67868:CDS
CAACTTGACATTCTTACAGT+AGG 0.545279 2.4:-57831696 MS.gene67868:CDS
TCTGGAGTAATGAATAATGA+AGG 0.545782 2.4:-57835131 MS.gene67868:CDS
CATCAAGTCTGTGAATGAGC+AGG 0.551415 2.4:-57831829 MS.gene67868:CDS
AGTCTTCAGTTGCTAAGCTT+AGG 0.552338 2.4:-57834000 MS.gene67868:CDS
AGTTGCTAAGCTTAGGCCAA+AGG 0.552702 2.4:-57833993 MS.gene67868:CDS
AAGGGCCGAGAGCTAACAAT+GGG 0.557060 2.4:-57834437 MS.gene67868:CDS
TCTCGGCCCTTCTGATACCA+TGG 0.560650 2.4:+57834449 None:intergenic
CCATAGTTGTAATATACATA+CGG 0.561725 2.4:+57834771 None:intergenic
CGTATGATGTTTCTCAAGCT+AGG 0.561789 2.4:-57835376 MS.gene67868:CDS
TGAGAAGAATTCAAGGCTCA+AGG 0.565493 2.4:-57831925 MS.gene67868:CDS
TCCGTATATACCTGGTGCCA+TGG 0.566479 2.4:-57834718 MS.gene67868:CDS
TACTGGTCCTCCCATTCACC+GGG 0.566938 2.4:+57834932 None:intergenic
TGTTTGGGACATCAGAATTG+TGG 0.568309 2.4:+57831850 None:intergenic
TCCGAGGCCATGGTATCAGA+AGG 0.568894 2.4:-57834456 MS.gene67868:CDS
GCAGCAAAACAATCTGGCAT+TGG 0.571218 2.4:-57831729 MS.gene67868:CDS
ACAATAATACCCATAATTGG+TGG 0.572117 2.4:+57835067 None:intergenic
AAGCTTAGGCCAAAGGCCCT+AGG 0.576887 2.4:-57833986 MS.gene67868:CDS
TATATACCTGGTGCCATGGT+AGG 0.577950 2.4:-57834714 MS.gene67868:CDS
ACTTCTGCTTACAGAACCGC+TGG 0.578505 2.4:+57834566 None:intergenic
GTGATCAAAATCGAGGCCCT+AGG 0.582768 2.4:-57833922 MS.gene67868:CDS
TTGCATTATCATAGTCAAGA+GGG 0.582783 2.4:+57833786 None:intergenic
GTAAGCAGAAGTGATGGAAG+AGG 0.583085 2.4:-57834555 MS.gene67868:CDS
TTCTTCTCATACTTGCTGGG+TGG 0.584664 2.4:+57831939 None:intergenic
TTTGCATTATCATAGTCAAG+AGG 0.589581 2.4:+57833785 None:intergenic
AACTCCGTGTTTGGAGCCAG+CGG 0.593659 2.4:-57834582 MS.gene67868:CDS
AAAGCTTATACGACCAAGGT+AGG 0.595919 2.4:-57833869 MS.gene67868:CDS
TAGGAACCAGAATGCTTACT+GGG 0.603432 2.4:-57835357 MS.gene67868:intron
AAAATTGTCTAGTTGAACAA+GGG 0.608179 2.4:+57834620 None:intergenic
CGAATCACCCGGTGAATGGG+AGG 0.610737 2.4:-57834939 MS.gene67868:CDS
GTTGATGGCTCATATGGAGG+AGG 0.610742 2.4:-57834690 MS.gene67868:CDS
TGTTGACTTTAATAAGGACA+TGG 0.611375 2.4:-57833413 MS.gene67868:CDS
GAAAATTGTCTAGTTGAACA+AGG 0.611684 2.4:+57834619 None:intergenic
GATTTAGGATTCGAATCACC+CGG 0.616404 2.4:-57834950 MS.gene67868:intron
AACAAATCAAACAAGTTCCG+AGG 0.617188 2.4:-57834472 MS.gene67868:CDS
GAACAAGGGGATCATAAGCA+GGG 0.617569 2.4:+57834634 None:intergenic
TGAGCCATCAACTCCTACCA+TGG 0.618664 2.4:+57834701 None:intergenic
GTTATGCAGGTTAATGCTAG+CGG 0.619200 2.4:-57833469 MS.gene67868:intron
TCAACTCCTACCATGGCACC+AGG 0.621665 2.4:+57834708 None:intergenic
GCTTATACGACCAAGGTAGG+AGG 0.628706 2.4:-57833866 MS.gene67868:CDS
GGCCGAGAGCTAACAATGGG+AGG 0.631197 2.4:-57834434 MS.gene67868:CDS
TATACGACCAAGGTAGGAGG+TGG 0.632143 2.4:-57833863 MS.gene67868:CDS
AGAACCGCTGGCTCCAAACA+CGG 0.634702 2.4:+57834578 None:intergenic
TGGCAGCAAGATAAATGGAG+TGG 0.637215 2.4:-57833385 MS.gene67868:CDS
AAATTGTCTAGTTGAACAAG+GGG 0.637347 2.4:+57834621 None:intergenic
AAAGCATTAAATACAACGTG+TGG 0.642188 2.4:-57833721 MS.gene67868:CDS
GGAGTTGATGGCTCATATGG+AGG 0.645378 2.4:-57834693 MS.gene67868:CDS
TGGTCCAGATGTCCAGTACA+CGG 0.651143 2.4:-57834891 MS.gene67868:intron
CTAGGACTAGGATCAAGTGA+TGG 0.656294 2.4:-57833968 MS.gene67868:CDS
GGTTCTGTAAGCAGAAGTGA+TGG 0.658111 2.4:-57834561 MS.gene67868:CDS
ACAATATTCAACTTTCGAGG+AGG 0.668248 2.4:+57831972 None:intergenic
CCGAGGCCATGGTATCAGAA+GGG 0.669836 2.4:-57834455 MS.gene67868:CDS
GAAGGGCCGAGAGCTAACAA+TGG 0.669968 2.4:-57834438 MS.gene67868:CDS
GCTTTGATCAACAAATTCAG+GGG 0.670276 2.4:+57835106 None:intergenic
TGTTATAAAATCATACAGTG+AGG 0.670580 2.4:-57833756 MS.gene67868:CDS
TGTGAAAGCTTATACGACCA+AGG 0.670917 2.4:-57833873 MS.gene67868:CDS
TAATAGCAGAGATACACAAG+AGG 0.687410 2.4:-57833269 MS.gene67868:intron
GTATTGGGTGATCAAAATCG+AGG 0.696890 2.4:-57833929 MS.gene67868:CDS
TACCGACCAATACAACAAGG+AGG 0.733388 2.4:-57833813 MS.gene67868:CDS
TTATACCGACCAATACAACA+AGG 0.761173 2.4:-57833816 MS.gene67868:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATGTGATTTTATTTTAT+AGG - chr2.4:57833912-57833931 MS.gene67868:CDS 10.0%
!!! AAATGTGATTTTATTTTATA+GGG - chr2.4:57833913-57833932 MS.gene67868:CDS 10.0%
!! ACAAAACTTTGAATATTTAT+AGG + chr2.4:57833758-57833777 None:intergenic 15.0%
!! ACAAAATTATGAATATTTAC+AGG - chr2.4:57833943-57833962 MS.gene67868:CDS 15.0%
!! ATTAATGATTTATTATTTGG+TGG - chr2.4:57831974-57831993 MS.gene67868:CDS 15.0%
!! CAAAACTTTGAATATTTATA+GGG + chr2.4:57833757-57833776 None:intergenic 15.0%
!! CAAAATTATGAATATTTACA+GGG - chr2.4:57833944-57833963 MS.gene67868:CDS 15.0%
!!! AATTTACCTTGTTAATATTT+TGG + chr2.4:57833988-57834007 None:intergenic 15.0%
!!! ATTTACCTTGTTAATATTTT+GGG + chr2.4:57833987-57834006 None:intergenic 15.0%
!!! TAATTTTATCATTTTGGTTT+AGG - chr2.4:57831742-57831761 MS.gene67868:CDS 15.0%
!!! TAGTAAATTTTGCTTATTAT+CGG - chr2.4:57834712-57834731 MS.gene67868:CDS 15.0%
!! AATCAGATGGAAAATATTAT+AGG - chr2.4:57833883-57833902 MS.gene67868:CDS 20.0%
!! ACAGAAAAAAATAGAAAGAT+AGG + chr2.4:57833335-57833354 None:intergenic 20.0%
!! ATCAGATGGAAAATATTATA+GGG - chr2.4:57833884-57833903 MS.gene67868:CDS 20.0%
!! ATTAACCCAAAATATTAACA+AGG - chr2.4:57833979-57833998 MS.gene67868:CDS 20.0%
!! TATGAATTTAACTAGATGTT+TGG - chr2.4:57834499-57834518 MS.gene67868:CDS 20.0%
!! TATTCAAATGTAATCCAAAA+AGG + chr2.4:57832623-57832642 None:intergenic 20.0%
!! TCAAGTAAATAAATTCATGT+CGG + chr2.4:57834623-57834642 None:intergenic 20.0%
!! TGAAATATAAGAACACATTA+GGG - chr2.4:57833714-57833733 MS.gene67868:CDS 20.0%
!! TTGAAATATAAGAACACATT+AGG - chr2.4:57833713-57833732 MS.gene67868:CDS 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + chr2.4:57833849-57833868 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr2.4:57833789-57833808 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr2.4:57833788-57833807 None:intergenic 20.0%
!!! ATTTATTATTTGGTGGATTT+AGG - chr2.4:57831981-57832000 MS.gene67868:CDS 20.0%
!!! ATTTTTTTCTGTAAGTTTGA+CGG - chr2.4:57833343-57833362 MS.gene67868:CDS 20.0%
!!! TGTGTGTAATTTTATCATTT+TGG - chr2.4:57831736-57831755 MS.gene67868:CDS 20.0%
!!! TTATTTTTGGAAACTACTTT+TGG + chr2.4:57835386-57835405 None:intergenic 20.0%
!!! TTTTGGATTTAGTTGATATT+AGG - chr2.4:57834550-57834569 MS.gene67868:CDS 20.0%
!!! TTTTGGGTTAATTAAGTAAA+TGG + chr2.4:57833971-57833990 None:intergenic 20.0%
! AAAATTGTCTAGTTGAACAA+GGG + chr2.4:57832329-57832348 None:intergenic 25.0%
! AATCCAACATTAAAACCAAA+AGG + chr2.4:57834671-57834690 None:intergenic 25.0%
! AATTATGGGTATTATTGTAC+AGG - chr2.4:57831884-57831903 MS.gene67868:CDS 25.0%
! ACCATTGATATATCAAAGTT+CGG + chr2.4:57831648-57831667 None:intergenic 25.0%
! AGAATTAACAGTTGGATTTA+TGG + chr2.4:57834233-57834252 None:intergenic 25.0%
! AGTAATGTATTAGTGATTGA+TGG - chr2.4:57832769-57832788 MS.gene67868:intron 25.0%
! ATGTTAAAATTAGTCGTTGT+AGG - chr2.4:57834280-57834299 MS.gene67868:intron 25.0%
! CCATAGTTGTAATATACATA+CGG + chr2.4:57832178-57832197 None:intergenic 25.0%
! GAATTAACAGTTGGATTTAT+GGG + chr2.4:57834232-57834251 None:intergenic 25.0%
! TATAATGATTGTGTGTATTG+AGG - chr2.4:57831695-57831714 MS.gene67868:CDS 25.0%
! TCCAAAATCAAGATTAAAGT+AGG + chr2.4:57834537-57834556 None:intergenic 25.0%
! TCTTTAACAGAATTAACAGT+TGG + chr2.4:57834241-57834260 None:intergenic 25.0%
! TGTACAATAATACCCATAAT+TGG + chr2.4:57831885-57831904 None:intergenic 25.0%
! TGTTATAAAATCATACAGTG+AGG - chr2.4:57833190-57833209 MS.gene67868:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr2.4:57833821-57833840 MS.gene67868:CDS 25.0%
!! ATGTTCCAAATCCAAATTTT+AGG - chr2.4:57833616-57833635 MS.gene67868:CDS 25.0%
!! ATTTAGTTGATATTAGGATC+TGG - chr2.4:57834556-57834575 MS.gene67868:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr2.4:57833822-57833841 MS.gene67868:CDS 25.0%
!! GATAATGTATTCTAAAGGAT+TGG - chr2.4:57834799-57834818 MS.gene67868:intron 25.0%
!!! ATTTATGGGCTTTAGATAAA+AGG + chr2.4:57834218-57834237 None:intergenic 25.0%
!!! TTACCTTTTGGTTTTAATGT+TGG - chr2.4:57834665-57834684 MS.gene67868:CDS 25.0%
AAATGCATTTGCAAGTTCTT+TGG - chr2.4:57831915-57831934 MS.gene67868:CDS 30.0%
AAATTGTCTAGTTGAACAAG+GGG + chr2.4:57832328-57832347 None:intergenic 30.0%
AATTGAATCATTGGAGAACT+CGG + chr2.4:57834383-57834402 None:intergenic 30.0%
ACAACAATATTCAACTTTCG+AGG + chr2.4:57834980-57834999 None:intergenic 30.0%
ACAATAATACCCATAATTGG+TGG + chr2.4:57831882-57831901 None:intergenic 30.0%
AGAATAAGACACTCAAGAAA+TGG + chr2.4:57834347-57834366 None:intergenic 30.0%
AGTATGATGTGCCTAAAATT+TGG + chr2.4:57833630-57833649 None:intergenic 30.0%
ATCTCCTCTATCTTAAAGAT+AGG - chr2.4:57835166-57835185 MS.gene67868:CDS 30.0%
ATGCTTTGATCAACAAATTC+AGG + chr2.4:57831845-57831864 None:intergenic 30.0%
ATGTGCCTAAAATTTGGATT+TGG + chr2.4:57833624-57833643 None:intergenic 30.0%
CCGTATGTATATTACAACTA+TGG - chr2.4:57832175-57832194 MS.gene67868:intron 30.0%
CTGTAGATACTATCTCTAAT+GGG - chr2.4:57832841-57832860 MS.gene67868:intron 30.0%
GAAAATTGTCTAGTTGAACA+AGG + chr2.4:57832330-57832349 None:intergenic 30.0%
GAATTTAACTAGATGTTTGG+TGG - chr2.4:57834502-57834521 MS.gene67868:CDS 30.0%
GCAAACAACCATATGTTAAT+TGG + chr2.4:57834417-57834436 None:intergenic 30.0%
TCAAATGTAATCCAAAAAGG+AGG + chr2.4:57832620-57832639 None:intergenic 30.0%
TCCGAACTTTGATATATCAA+TGG - chr2.4:57831644-57831663 MS.gene67868:CDS 30.0%
TCTCCAATGATTCAATTGAT+TGG - chr2.4:57834386-57834405 MS.gene67868:CDS 30.0%
TGCTTTGATCAACAAATTCA+GGG + chr2.4:57831844-57831863 None:intergenic 30.0%
TGGCAGATAATGTATTCTAA+AGG - chr2.4:57834794-57834813 MS.gene67868:CDS 30.0%
TTAACCTGCATAACAAAAAC+AGG + chr2.4:57833471-57833490 None:intergenic 30.0%
TTGCATTATCATAGTCAAGA+GGG + chr2.4:57833163-57833182 None:intergenic 30.0%
TTTGCATTATCATAGTCAAG+AGG + chr2.4:57833164-57833183 None:intergenic 30.0%
! AAAGCATTAAATACAACGTG+TGG - chr2.4:57833225-57833244 MS.gene67868:intron 30.0%
! AAAGCATTACAACCACAAAA+AGG - chr2.4:57835349-57835368 MS.gene67868:intron 30.0%
! AAAGTATCAGCTGAAAAATC+TGG - chr2.4:57833302-57833321 MS.gene67868:CDS 30.0%
! ATTTTGCTTATTATCGGTCA+TGG - chr2.4:57834718-57834737 MS.gene67868:CDS 30.0%
! GCCTACTTTAATCTTGATTT+TGG - chr2.4:57834533-57834552 MS.gene67868:CDS 30.0%
! GGTATAATTTTCCTCCTTTT+TGG - chr2.4:57832606-57832625 MS.gene67868:intron 30.0%
! GTGTTTTCTTCTTTATCTCA+GGG - chr2.4:57832133-57832152 MS.gene67868:CDS 30.0%
! TAAGAATGTCAAGTTGTTCT+CGG + chr2.4:57835246-57835265 None:intergenic 30.0%
! TACGGATTATATGGATTGTA+TGG + chr2.4:57832214-57832233 None:intergenic 30.0%
! TCTGGAGTAATGAATAATGA+AGG - chr2.4:57831815-57831834 MS.gene67868:CDS 30.0%
! TGTGTTTTCTTCTTTATCTC+AGG - chr2.4:57832132-57832151 MS.gene67868:CDS 30.0%
! TTAATAAGGACATGGACTTT+TGG - chr2.4:57833541-57833560 MS.gene67868:intron 30.0%
! TTTATGATATGCCACTTAAC+AGG + chr2.4:57833594-57833613 None:intergenic 30.0%
! TTTGTGGTTGTAATGCTTTT+GGG + chr2.4:57835348-57835367 None:intergenic 30.0%
! TTTTGTGGTTGTAATGCTTT+TGG + chr2.4:57835349-57835368 None:intergenic 30.0%
!! AAATGTTAGTGCTGATGTAT+TGG - chr2.4:57833001-57833020 MS.gene67868:intron 30.0%
!! AATGTTAGTGCTGATGTATT+GGG - chr2.4:57833002-57833021 MS.gene67868:intron 30.0%
!! ATAAGCAGGGTTTTGATAAT+TGG + chr2.4:57832302-57832321 None:intergenic 30.0%
!! ATTTGCAAGTTCTTTGGTTT+TGG - chr2.4:57831921-57831940 MS.gene67868:CDS 30.0%
!! GTTGATGGAAATTTTTGACA+GGG - chr2.4:57833854-57833873 MS.gene67868:CDS 30.0%
!! TAAGCAGGGTTTTGATAATT+GGG + chr2.4:57832301-57832320 None:intergenic 30.0%
!! TGAACCTATCTTTAAGATAG+AGG + chr2.4:57835173-57835192 None:intergenic 30.0%
!! TGTTGACTTTAATAAGGACA+TGG - chr2.4:57833533-57833552 MS.gene67868:intron 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG - chr2.4:57833853-57833872 MS.gene67868:CDS 30.0%
!! TTAATGTCTGCTTTTCATAC+TGG - chr2.4:57833426-57833445 MS.gene67868:CDS 30.0%
!! TTTCTTTTGTAGGAGTGTAT+AGG - chr2.4:57832740-57832759 MS.gene67868:intron 30.0%
!! TTTTTGGAAACTACTTTTGG+CGG + chr2.4:57835383-57835402 None:intergenic 30.0%
!!! ATCATTTTGGTTTAGGTTGA+AGG - chr2.4:57831749-57831768 MS.gene67868:CDS 30.0%
!!! GACTTTTGAAACTTCTGATT+AGG + chr2.4:57834931-57834950 None:intergenic 30.0%
!!! TATAGGATTTTTGGTGTAGA+TGG - chr2.4:57832035-57832054 MS.gene67868:CDS 30.0%
!!! TCATTTTGGTTTAGGTTGAA+GGG - chr2.4:57831750-57831769 MS.gene67868:CDS 30.0%
AAACTGATCAACAGTTCACT+TGG + chr2.4:57834647-57834666 None:intergenic 35.0%
AAATTACCCAGTAAGCATTC+TGG + chr2.4:57831598-57831617 None:intergenic 35.0%
AACAAATCAAACAAGTTCCG+AGG - chr2.4:57832474-57832493 MS.gene67868:intron 35.0%
AACACATTAATATCAGCCAC+AGG + chr2.4:57832118-57832137 None:intergenic 35.0%
AACCTTAACCAAACACAAAC+AGG + chr2.4:57834443-57834462 None:intergenic 35.0%
ACAATATTCAACTTTCGAGG+AGG + chr2.4:57834977-57834996 None:intergenic 35.0%
ACTCCAGATTGTTCAAAGTT+TGG + chr2.4:57831803-57831822 None:intergenic 35.0%
AGTTCATGGAAACAAGAAGT+TGG - chr2.4:57833256-57833275 MS.gene67868:intron 35.0%
CAAAAGTTCAATGAAGCTTC+TGG - chr2.4:57832421-57832440 MS.gene67868:intron 35.0%
CAACTTGACATTCTTACAGT+AGG - chr2.4:57835250-57835269 MS.gene67868:intron 35.0%
CAGCCAATCAATTGAATCAT+TGG + chr2.4:57834392-57834411 None:intergenic 35.0%
CAGTGCCAGTTAAAGTTAAT+GGG - chr2.4:57835275-57835294 MS.gene67868:intron 35.0%
CATTCACAGACTTGATGTTT+GGG + chr2.4:57835114-57835133 None:intergenic 35.0%
CCATATAATCCGTATATACC+TGG - chr2.4:57832220-57832239 MS.gene67868:intron 35.0%
CCATTAGAGATAGTATCTAC+AGG + chr2.4:57832843-57832862 None:intergenic 35.0%
CCTGTAGATACTATCTCTAA+TGG - chr2.4:57832840-57832859 MS.gene67868:intron 35.0%
CTACACCAAAAATCCTATAC+TGG + chr2.4:57832034-57832053 None:intergenic 35.0%
CTCCAGATTGTTCAAAGTTT+GGG + chr2.4:57831802-57831821 None:intergenic 35.0%
GAATTCTTCTCATACTTGCT+GGG + chr2.4:57835013-57835032 None:intergenic 35.0%
GCAAGTATGAGAAGAATTCA+AGG - chr2.4:57835014-57835033 MS.gene67868:intron 35.0%
GCTAACCCATTAACTTTAAC+TGG + chr2.4:57835283-57835302 None:intergenic 35.0%
GCTTTGATCAACAAATTCAG+GGG + chr2.4:57831843-57831862 None:intergenic 35.0%
GTATCTCTGCTATTAGTTAC+TGG + chr2.4:57833672-57833691 None:intergenic 35.0%
GTTCATGGAAACAAGAAGTT+GGG - chr2.4:57833257-57833276 MS.gene67868:intron 35.0%
GTTCTGCTCAGAATTTGAAA+TGG + chr2.4:57835074-57835093 None:intergenic 35.0%
TAATAGCAGAGATACACAAG+AGG - chr2.4:57833677-57833696 MS.gene67868:CDS 35.0%
TCAGTGCCAGTTAAAGTTAA+TGG - chr2.4:57835274-57835293 MS.gene67868:intron 35.0%
TCATTCACAGACTTGATGTT+TGG + chr2.4:57835115-57835134 None:intergenic 35.0%
TGAATTCTTCTCATACTTGC+TGG + chr2.4:57835014-57835033 None:intergenic 35.0%
TGCTTAAGGAAAATGTCACA+AGG + chr2.4:57833817-57833836 None:intergenic 35.0%
TGGCTGAACCAATTAACATA+TGG - chr2.4:57834406-57834425 MS.gene67868:CDS 35.0%
TTAGGGACCAAAAATGTTGA+TGG - chr2.4:57833839-57833858 MS.gene67868:CDS 35.0%
TTATACCGACCAATACAACA+AGG - chr2.4:57833130-57833149 MS.gene67868:intron 35.0%
TTGACACATGCAAATGTTTC+TGG - chr2.4:57832544-57832563 MS.gene67868:intron 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr2.4:57833831-57833850 None:intergenic 35.0%
! AAGCTTCTGGTAACTTTTCT+AGG - chr2.4:57832434-57832453 MS.gene67868:intron 35.0%
! ACTTTTGGCAGCAAGATAAA+TGG - chr2.4:57833556-57833575 MS.gene67868:intron 35.0%
! CCAGGTATATACGGATTATA+TGG + chr2.4:57832223-57832242 None:intergenic 35.0%
! CTGTTGATCAGTTTACCTTT+TGG - chr2.4:57834653-57834672 MS.gene67868:CDS 35.0%
! GATTTTGCAGCAAATGCTAA+TGG - chr2.4:57832921-57832940 MS.gene67868:intron 35.0%
! TAGATGTTTGGTGGTTTACT+AGG - chr2.4:57834511-57834530 MS.gene67868:CDS 35.0%
! TTTTCTTCTTTATCTCAGGG+TGG - chr2.4:57832136-57832155 MS.gene67868:CDS 35.0%
!! AAGCAGGGTTTTGATAATTG+GGG + chr2.4:57832300-57832319 None:intergenic 35.0%
!! GTTAAAGTTAATGGGTTAGC+TGG - chr2.4:57835283-57835302 MS.gene67868:intron 35.0%
!! GTTTTGATCTACTAGTCCTA+GGG + chr2.4:57833043-57833062 None:intergenic 35.0%
!! TGGCTCTGTTGACTTTAATA+AGG - chr2.4:57833527-57833546 MS.gene67868:intron 35.0%
!!! CATTTTGGTTTAGGTTGAAG+GGG - chr2.4:57831751-57831770 MS.gene67868:CDS 35.0%
!!! GATAGCTGTGTTTTGAAAAC+TGG + chr2.4:57834139-57834158 None:intergenic 35.0%
!!! GTGAACGCTATTTCTTTTGT+AGG - chr2.4:57832730-57832749 MS.gene67868:intron 35.0%
!!! TCATCCTGTTTTTGTTATGC+AGG - chr2.4:57833464-57833483 MS.gene67868:intron 35.0%
!!! TGTTTTGATCTACTAGTCCT+AGG + chr2.4:57833044-57833063 None:intergenic 35.0%
AAAGCTTATACGACCAAGGT+AGG - chr2.4:57833077-57833096 MS.gene67868:intron 40.0%
AATCAGACTGCAGTACTATC+GGG - chr2.4:57834061-57834080 MS.gene67868:CDS 40.0%
AGCCCAAACTTTGAACAATC+TGG - chr2.4:57831797-57831816 MS.gene67868:CDS 40.0%
AGTCTTCAGTTGCTAAGCTT+AGG - chr2.4:57832946-57832965 MS.gene67868:intron 40.0%
ATAGTAGCTTCTTCACGAAG+TGG - chr2.4:57832891-57832910 MS.gene67868:intron 40.0%
ATCACTTGATCCTAGTCCTA+GGG + chr2.4:57832979-57832998 None:intergenic 40.0%
CAATCAGACTGCAGTACTAT+CGG - chr2.4:57834060-57834079 MS.gene67868:CDS 40.0%
CGTATGATGTTTCTCAAGCT+AGG - chr2.4:57831570-57831589 MS.gene67868:CDS 40.0%
GAAACTTCTGATTAGGAGCT+TGG + chr2.4:57834924-57834943 None:intergenic 40.0%
GAAGTTGGGAAATGCTTATG+AGG - chr2.4:57833271-57833290 MS.gene67868:CDS 40.0%
GACAGGGACTAAAAATCAGA+TGG - chr2.4:57833870-57833889 MS.gene67868:CDS 40.0%
GTATTGAATGTTCTTGCTCG+TGG - chr2.4:57834774-57834793 MS.gene67868:CDS 40.0%
GTATTGGGTGATCAAAATCG+AGG - chr2.4:57833017-57833036 MS.gene67868:intron 40.0%
GTTATGCAGGTTAATGCTAG+CGG - chr2.4:57833477-57833496 MS.gene67868:intron 40.0%
TAGGAACCAGAATGCTTACT+GGG - chr2.4:57831589-57831608 MS.gene67868:CDS 40.0%
TCCAGTATTCATACCAGCAT+TGG - chr2.4:57834949-57834968 MS.gene67868:intron 40.0%
TCTTCTGGGTTCTTGAAAGT+TGG - chr2.4:57835307-57835326 MS.gene67868:intron 40.0%
TGAGAAGAATTCAAGGCTCA+AGG - chr2.4:57835021-57835040 MS.gene67868:intron 40.0%
TGCCTGTTTGTGTTTGGTTA+AGG - chr2.4:57834438-57834457 MS.gene67868:CDS 40.0%
TGTGAAAGCTTATACGACCA+AGG - chr2.4:57833073-57833092 MS.gene67868:intron 40.0%
TTTGCTTGCCTGTTTGTGTT+TGG - chr2.4:57834432-57834451 MS.gene67868:CDS 40.0%
! AATGCTAGCGGTCAATTTTG+TGG - chr2.4:57833489-57833508 MS.gene67868:intron 40.0%
! ATCCTCCTTGTTGTATTGGT+CGG + chr2.4:57833138-57833157 None:intergenic 40.0%
! GAGGACCAGTATAGGATTTT+TGG - chr2.4:57832026-57832045 MS.gene67868:CDS 40.0%
! GATCGTGCATGATCTTTTGA+CGG + chr2.4:57834895-57834914 None:intergenic 40.0%
! GATTTAGGATTCGAATCACC+CGG - chr2.4:57831996-57832015 MS.gene67868:CDS 40.0%
! GGAAATCCTCCTTGTTGTAT+TGG + chr2.4:57833142-57833161 None:intergenic 40.0%
! GTATCTCTCTGTCCAGTTTT+GGG - chr2.4:57832092-57832111 MS.gene67868:CDS 40.0%
! GTTATGCTGTTCTGTTTTGC+AGG - chr2.4:57832791-57832810 MS.gene67868:intron 40.0%
! TGTATCTCTCTGTCCAGTTT+TGG - chr2.4:57832091-57832110 MS.gene67868:CDS 40.0%
! TGTTTGGGACATCAGAATTG+TGG + chr2.4:57835099-57835118 None:intergenic 40.0%
!! AGGGTTTTGATAATTGGGGA+GGG + chr2.4:57832296-57832315 None:intergenic 40.0%
!! ATGCAAATGTTTCTGGAAGC+AGG - chr2.4:57832551-57832570 MS.gene67868:intron 40.0%
!!! GTTTTGAAAACTGGTCCAGA+AGG + chr2.4:57834130-57834149 None:intergenic 40.0%
!!! TCTTTGGTTTTGGTGGTAAC+TGG - chr2.4:57831931-57831950 MS.gene67868:CDS 40.0%
!!! TGCAAGTTCTTTGGTTTTGG+TGG - chr2.4:57831924-57831943 MS.gene67868:CDS 40.0%
ACCATGGCACCAGGTATATA+CGG + chr2.4:57832232-57832251 None:intergenic 45.0%
ACCCATAATTGGTGGAAGCA+GGG + chr2.4:57831874-57831893 None:intergenic 45.0%
ACCCTGCTTCCACCAATTAT+GGG - chr2.4:57831870-57831889 MS.gene67868:CDS 45.0%
ACGGAGTTTGCAGAACTATC+AGG + chr2.4:57832352-57832371 None:intergenic 45.0%
AGCATCATCTGCTGTTCATC+AGG - chr2.4:57832585-57832604 MS.gene67868:intron 45.0%
AGTTCTGCAAACTCCGTGTT+TGG - chr2.4:57832355-57832374 MS.gene67868:intron 45.0%
AGTTGCTAAGCTTAGGCCAA+AGG - chr2.4:57832953-57832972 MS.gene67868:intron 45.0%
ATTCGAATCACCCGGTGAAT+GGG - chr2.4:57832004-57832023 MS.gene67868:CDS 45.0%
CAGGTTGCAGCAAAACAATC+TGG - chr2.4:57835211-57835230 MS.gene67868:intron 45.0%
CATCAAGTCTGTGAATGAGC+AGG - chr2.4:57835117-57835136 MS.gene67868:CDS 45.0%
CATCACTTGATCCTAGTCCT+AGG + chr2.4:57832980-57832999 None:intergenic 45.0%
CTAGGAACCAGAATGCTTAC+TGG - chr2.4:57831588-57831607 MS.gene67868:CDS 45.0%
CTAGGACTAGGATCAAGTGA+TGG - chr2.4:57832978-57832997 MS.gene67868:intron 45.0%
GAACAAGGGGATCATAAGCA+GGG + chr2.4:57832315-57832334 None:intergenic 45.0%
GCAGCAAAACAATCTGGCAT+TGG - chr2.4:57835217-57835236 MS.gene67868:intron 45.0%
GCCAATGCTGGTATGAATAC+TGG + chr2.4:57834953-57834972 None:intergenic 45.0%
GGTTCTGTAAGCAGAAGTGA+TGG - chr2.4:57832385-57832404 MS.gene67868:intron 45.0%
GTACTGCAGTCTGATTGAAC+TGG + chr2.4:57834057-57834076 None:intergenic 45.0%
GTGGAAGCTTTCCTGTTAAG+TGG - chr2.4:57833580-57833599 MS.gene67868:intron 45.0%
GTGTGGTCTTCTACAGTTCA+TGG - chr2.4:57833242-57833261 MS.gene67868:intron 45.0%
TACCCATAATTGGTGGAAGC+AGG + chr2.4:57831875-57831894 None:intergenic 45.0%
TACCCTGCTTCCACCAATTA+TGG - chr2.4:57831869-57831888 MS.gene67868:CDS 45.0%
TACCGACCAATACAACAAGG+AGG - chr2.4:57833133-57833152 MS.gene67868:intron 45.0%
TGAACAAGGGGATCATAAGC+AGG + chr2.4:57832316-57832335 None:intergenic 45.0%
TGGCAGCAAGATAAATGGAG+TGG - chr2.4:57833561-57833580 MS.gene67868:intron 45.0%
TGTGGAGTTGCAGAGATGAT+TGG - chr2.4:57833507-57833526 MS.gene67868:intron 45.0%
! AACAGCTGACTCTCAATCAG+CGG + chr2.4:57832669-57832688 None:intergenic 45.0%
! GATCTGGTTGTTGTTGCCAT+GGG - chr2.4:57834572-57834591 MS.gene67868:CDS 45.0%
! GTAAGCAGAAGTGATGGAAG+AGG - chr2.4:57832391-57832410 MS.gene67868:intron 45.0%
! TGTTTTGCTGCAACCTGCTT+CGG + chr2.4:57835208-57835227 None:intergenic 45.0%
! TTCCTCCCATTGTTAGCTCT+CGG + chr2.4:57832517-57832536 None:intergenic 45.0%
! TTCTTCTCATACTTGCTGGG+TGG + chr2.4:57835010-57835029 None:intergenic 45.0%
!! CAGGGTTTTGATAATTGGGG+AGG + chr2.4:57832297-57832316 None:intergenic 45.0%
!! GTAGGAGTTGATGGCTCATA+TGG - chr2.4:57832250-57832269 MS.gene67868:intron 45.0%
!! TATATACCTGGTGCCATGGT+AGG - chr2.4:57832232-57832251 MS.gene67868:intron 45.0%
!! ATAAAAAAATAATATAATCA+TGG + chr2.4:57834192-57834211 None:intergenic 5.0%
!! TATATTAATGATTTATTATT+TGG - chr2.4:57831971-57831990 MS.gene67868:CDS 5.0%
AAACCAACCGGTGAATTGGC+TGG - chr2.4:57834087-57834106 MS.gene67868:CDS 50.0%
AAGGGCCGAGAGCTAACAAT+GGG - chr2.4:57832509-57832528 MS.gene67868:intron 50.0%
AATCAGCGGCTGAAGTAGTC+GGG + chr2.4:57832655-57832674 None:intergenic 50.0%
AATCGCCATTAACCCGAAGC+AGG - chr2.4:57835192-57835211 MS.gene67868:intron 50.0%
ACTATCGGGCTCAAACCAAC+CGG - chr2.4:57834075-57834094 MS.gene67868:CDS 50.0%
ACTTCTGCTTACAGAACCGC+TGG + chr2.4:57832383-57832402 None:intergenic 50.0%
ATACTGGTCCTCCCATTCAC+CGG + chr2.4:57832018-57832037 None:intergenic 50.0%
ATGATGCACTGCTACACCCA+TGG + chr2.4:57834591-57834610 None:intergenic 50.0%
CAATCAGCGGCTGAAGTAGT+CGG + chr2.4:57832656-57832675 None:intergenic 50.0%
GATTCGAATCACCCGGTGAA+TGG - chr2.4:57832003-57832022 MS.gene67868:CDS 50.0%
GCTCAAACCAACCGGTGAAT+TGG - chr2.4:57834083-57834102 MS.gene67868:CDS 50.0%
GCTTATACGACCAAGGTAGG+AGG - chr2.4:57833080-57833099 MS.gene67868:intron 50.0%
GTGAATGGGAGGACCAGTAT+AGG - chr2.4:57832018-57832037 MS.gene67868:CDS 50.0%
GTGATCAAAATCGAGGCCCT+AGG - chr2.4:57833024-57833043 MS.gene67868:intron 50.0%
TAGTCAGACTCACCGTGTAC+TGG + chr2.4:57832070-57832089 None:intergenic 50.0%
TATACGACCAAGGTAGGAGG+TGG - chr2.4:57833083-57833102 MS.gene67868:intron 50.0%
TCAAACAAGTTCCGAGGCCA+TGG - chr2.4:57832480-57832499 MS.gene67868:intron 50.0%
TCCAGAAGGACCAGTTGAAC+CGG + chr2.4:57834116-57834135 None:intergenic 50.0%
TGAGCCATCAACTCCTACCA+TGG + chr2.4:57832248-57832267 None:intergenic 50.0%
TGGTCCAGATGTCCAGTACA+CGG - chr2.4:57832055-57832074 MS.gene67868:CDS 50.0%
! GGATCTGGTTGTTGTTGCCA+TGG - chr2.4:57834571-57834590 MS.gene67868:CDS 50.0%
! GTTTTGCTGCAACCTGCTTC+GGG + chr2.4:57835207-57835226 None:intergenic 50.0%
! TCCGTATATACCTGGTGCCA+TGG - chr2.4:57832228-57832247 MS.gene67868:intron 50.0%
! TGCAACCTGCTTCGGGTTAA+TGG + chr2.4:57835200-57835219 None:intergenic 50.0%
!! AATGGGTTAGCTGGCTCTTC+TGG - chr2.4:57835292-57835311 MS.gene67868:intron 50.0%
!! ATGGGTTAGCTGGCTCTTCT+GGG - chr2.4:57835293-57835312 MS.gene67868:intron 50.0%
!! GGAGTTGATGGCTCATATGG+AGG - chr2.4:57832253-57832272 MS.gene67868:intron 50.0%
!! GTTGATGGCTCATATGGAGG+AGG - chr2.4:57832256-57832275 MS.gene67868:intron 50.0%
AAGCTTAGGCCAAAGGCCCT+AGG - chr2.4:57832960-57832979 MS.gene67868:intron 55.0%
ATCAGCCACAGGCCCAAAAC+TGG + chr2.4:57832107-57832126 None:intergenic 55.0%
CCAGAAGGACCAGTTGAACC+GGG + chr2.4:57834115-57834134 None:intergenic 55.0%
CCCTTCTGATACCATGGCCT+CGG + chr2.4:57832494-57832513 None:intergenic 55.0%
CCGAGGCCATGGTATCAGAA+GGG - chr2.4:57832491-57832510 MS.gene67868:intron 55.0%
CTCACCGTGTACTGGACATC+TGG + chr2.4:57832062-57832081 None:intergenic 55.0%
CTCGTTACCACCTCCTACCT+TGG + chr2.4:57833093-57833112 None:intergenic 55.0%
GAACCAGCCAATTCACCGGT+TGG + chr2.4:57834093-57834112 None:intergenic 55.0%
GAAGGGCCGAGAGCTAACAA+TGG - chr2.4:57832508-57832527 MS.gene67868:intron 55.0%
GATCCTAGTCCTAGGGCCTT+TGG + chr2.4:57832972-57832991 None:intergenic 55.0%
TACTGGTCCTCCCATTCACC+GGG + chr2.4:57832017-57832036 None:intergenic 55.0%
TCAACTCCTACCATGGCACC+AGG + chr2.4:57832241-57832260 None:intergenic 55.0%
TCCGAGGCCATGGTATCAGA+AGG - chr2.4:57832490-57832509 MS.gene67868:intron 55.0%
TCTCGGCCCTTCTGATACCA+TGG + chr2.4:57832500-57832519 None:intergenic 55.0%
! AACTCCGTGTTTGGAGCCAG+CGG - chr2.4:57832364-57832383 MS.gene67868:intron 55.0%
! GCGGCAGCATCTCCTTTTTG+TGG + chr2.4:57835364-57835383 None:intergenic 55.0%
! GGTGCCATGGTAGGAGTTGA+TGG - chr2.4:57832241-57832260 MS.gene67868:intron 55.0%
!! AGAACCGCTGGCTCCAAACA+CGG + chr2.4:57832371-57832390 None:intergenic 55.0%
!! TTTCGAGGAGGTGCCAATGC+TGG + chr2.4:57834965-57834984 None:intergenic 55.0%
!!! TCTGTCCAGTTTTGGGCCTG+TGG - chr2.4:57832099-57832118 MS.gene67868:CDS 55.0%
AGGCCAAAGGCCCTAGGACT+AGG - chr2.4:57832966-57832985 MS.gene67868:intron 60.0%
CCCGGTTCAACTGGTCCTTC+TGG - chr2.4:57834112-57834131 MS.gene67868:CDS 60.0%
CCGGGAACCAGCCAATTCAC+CGG + chr2.4:57834097-57834116 None:intergenic 60.0%
CGAATCACCCGGTGAATGGG+AGG - chr2.4:57832007-57832026 MS.gene67868:CDS 60.0%
GGCCGAGAGCTAACAATGGG+AGG - chr2.4:57832512-57832531 MS.gene67868:intron 60.0%
! CCGGTGAATTGGCTGGTTCC+CGG - chr2.4:57834094-57834113 MS.gene67868:CDS 60.0%
! TGGCTGGTTCCCGGTTCAAC+TGG - chr2.4:57834103-57834122 MS.gene67868:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 57831563 57835405 57831563 ID=MS.gene67868
chr2.4 mRNA 57831563 57835405 57831563 ID=MS.gene67868.t1;Parent=MS.gene67868
chr2.4 exon 57835358 57835405 57835358 ID=MS.gene67868.t1.exon1;Parent=MS.gene67868.t1
chr2.4 CDS 57835358 57835405 57835358 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
chr2.4 exon 57835063 57835204 57835063 ID=MS.gene67868.t1.exon2;Parent=MS.gene67868.t1
chr2.4 CDS 57835063 57835204 57835063 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
chr2.4 exon 57834892 57834965 57834892 ID=MS.gene67868.t1.exon3;Parent=MS.gene67868.t1
chr2.4 CDS 57834892 57834965 57834892 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
chr2.4 exon 57834362 57834814 57834362 ID=MS.gene67868.t1.exon4;Parent=MS.gene67868.t1
chr2.4 CDS 57834362 57834814 57834362 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
chr2.4 exon 57833616 57834155 57833616 ID=MS.gene67868.t1.exon5;Parent=MS.gene67868.t1
chr2.4 CDS 57833616 57834155 57833616 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
chr2.4 exon 57833270 57833482 57833270 ID=MS.gene67868.t1.exon6;Parent=MS.gene67868.t1
chr2.4 CDS 57833270 57833482 57833270 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
chr2.4 exon 57831563 57832168 57831563 ID=MS.gene67868.t1.exon7;Parent=MS.gene67868.t1
chr2.4 CDS 57831563 57832168 57831563 ID=cds.MS.gene67868.t1;Parent=MS.gene67868.t1
Gene Sequence

>MS.gene67868

ATGGAAACGTATGATGTTTCTCAAGCTAGGAACCAGAATGCTTACTGGGTAATTTTTAATAAATTTTGTAATTTCTTGACTTCCGAACTTTGATATATCAATGGTTGTTTAATGATTTGATTTTCTTTTTAATATAATGATTGTGTGTATTGAGGTTGTATGATAGTCGATAATGTGTGTAATTTTATCATTTTGGTTTAGGTTGAAGGGGCTGATATAAATTCACAGTTCACAAGCCCAAACTTTGAACAATCTGGAGTAATGAATAATGAAGGAGCCCCTGAATTTGTTGATCAAAGCATGTATTACCCTGCTTCCACCAATTATGGGTATTATTGTACAGGTAAATTTAAAATGCATTTGCAAGTTCTTTGGTTTTGGTGGTAACTGGTATTTTATGCATCATATTATATTAATGATTTATTATTTGGTGGATTTAGGATTCGAATCACCCGGTGAATGGGAGGACCAGTATAGGATTTTTGGTGTAGATGGTCCAGATGTCCAGTACACGGTGAGTCTGACTACTGTATCTCTCTGTCCAGTTTTGGGCCTGTGGCTGATATTAATGTGTTTTCTTCTTTATCTCAGGGTGGACAAGATGAAAGTTTTCCGTATGTATATTACAACTATGGATATGCACAGTCTCCATACAATCCATATAATCCGTATATACCTGGTGCCATGGTAGGAGTTGATGGCTCATATGGAGGAGGACAATCTTATTACACCCTCCCCAATTATCAAAACCCTGCTTATGATCCCCTTGTTCAACTAGACAATTTTCCTGATAGTTCTGCAAACTCCGTGTTTGGAGCCAGCGGTTCTGTAAGCAGAAGTGATGGAAGAGGTTTGAAACAAAAGTTCAATGAAGCTTCTGGTAACTTTTCTAGGAACTCTTTAAAACTTTCAACAAATCAAACAAGTTCCGAGGCCATGGTATCAGAAGGGCCGAGAGCTAACAATGGGAGGAAGCAAGATTTGACACATGCAAATGTTTCTGGAAGCAGGTCTCTCAACGCAGCATCATCTGCTGTTCATCAGGTATAATTTTCCTCCTTTTTGGATTACATTTGAATATAATTTTGTCCCGACTACTTCAGCCGCTGATTGAGAGTCAGCTGTTCTATGACTACGAGTGACGTTAGTTGCTACTATTACGATGTTGTGAACGCTATTTCTTTTGTAGGAGTGTATAGGTAGATCAGTAATGTATTAGTGATTGATGGTTATGCTGTTCTGTTTTGCAGGATAGAAGAATTGATGCTTCAGTGCAACCTGTAGATACTATCTCTAATGGGAATGTTATTTCTCATCGTAATCAATTGATAGTAGCTTCTTCACGAAGTGGATTTTCTGATTTTGCAGCAAATGCTAATGGACAGTCTTCAGTTGCTAAGCTTAGGCCAAAGGCCCTAGGACTAGGATCAAGTGATGGAAATGTTAGTGCTGATGTATTGGGTGATCAAAATCGAGGCCCTAGGACTAGTAGATCAAAACATCAACTGTCTGTGAAAGCTTATACGACCAAGGTAGGAGGTGGTAACGAGCAAGACAACATCATCATTTATACCGACCAATACAACAAGGAGGATTTCCCTCTTGACTATGATAATGCAAAGTTTTTTGTTATAAAATCATACAGTGAGGATGATGTGCACAAAAGCATTAAATACAACGTGTGGTCTTCTACAGTTCATGGAAACAAGAAGTTGGGAAATGCTTATGAGGATACAAAGAAAGTATCAGCTGAAAAATCTGGAGTCTGTCCTATCTTTCTATTTTTTTCTGTAAGTTTGACGGTGTCTTAACTGAGATTTTTTTATGTTTTCTTTGTGTATCTAATATCTATTTGTAAGCTAATTAATGTCTGCTTTTCATACTGGATTTAATAATATTCTTCATCCTGTTTTTGTTATGCAGGTTAATGCTAGCGGTCAATTTTGTGGAGTTGCAGAGATGATTGGCTCTGTTGACTTTAATAAGGACATGGACTTTTGGCAGCAAGATAAATGGAGTGGAAGCTTTCCTGTTAAGTGGCATATCATAAAAGATGTTCCAAATCCAAATTTTAGGCACATCATACTAGAGAACAATGAAAACAAGCCAGTAACTAATAGCAGAGATACACAAGAGGTATTCATTATTTGTTGAAATATAAGAACACATTAGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCAAAGTTTTGTTTTTAGTCCCTACAAAATAAAATCACACTTTTTAGTCCTTGTGACATTTTCCTTAAGCATTTTAGGGACCAAAAATGTTGATGGAAATTTTTGACAGGGACTAAAAATCAGATGGAAAATATTATAGGGATTAAAAAATGTGATTTTATTTTATAGGGACTAAAAACAAAATTATGAATATTTACAGGGACCATTTACTTAATTAACCCAAAATATTAACAAGGTAAATTAGTAAAATCTAAAAATAGAAATCAGTTGTAGCAACTGTGATTCAATCCAGTTCAATCAGACTGCAGTACTATCGGGCTCAAACCAACCGGTGAATTGGCTGGTTCCCGGTTCAACTGGTCCTTCTGGACCAGTTTTCAAAACACAGCTATCAAGTTTATTATCAATATCAATCATGTTACGCCATGATTATATTATTTTTTTATTTTCCTTTTATCTAAAGCCCATAAATCCAACTGTTAATTCTGTTAAAGAGTTCTTTTATGAGATTTATATGTTAAAATTAGTCGTTGTAGGTAAAGTTTTTGCACTGAATTTGTTTGCTAAAATGATTATTTCCATTTCTTGAGTGTCTTATTCTGTTATATCAATTGCCGAGTTCTCCAATGATTCAATTGATTGGCTGAACCAATTAACATATGGTTGTTTGCTTGCCTGTTTGTGTTTGGTTAAGGTTTTAGCAGAGCTAATATGCTTGAAGAGAAAGCAATTGTATGAATTTAACTAGATGTTTGGTGGTTTACTAGGCCTACTTTAATCTTGATTTTGGATTTAGTTGATATTAGGATCTGGTTGTTGTTGCCATGGGTGTAGCAGTGCATCATAAATGATTACCGACATGAATTTATTTACTTGAACCAAGTGAACTGTTGATCAGTTTACCTTTTGGTTTTAATGTTGGATTAAACTAGTTGTTGTTTGTCTCTAGTAAATTTTGCTTATTATCGGTCATGGCTTTTTTTTTCTCTACTTGATTTAGAATATCGCGTATTGAATGTTCTTGCTCGTGGCAGATAATGTATTCTAAAGGATTGGAAATGCTGAAAATATTCAAAAATCATACTTTGAAGACATCGTTGCTTGATGACTTCATGTATTATGAAAACCGTCAAAAGATCATGCACGATCAGAAAGCCAAGCTCCTAATCAGAAGTTTCAAAAGTCCAGTATTCATACCAGCATTGGCACCTCCTCGAAAGTTGAATATTGTTGTTGACAAACCACCCAGCAAGTATGAGAAGAATTCAAGGCTCAAGGATGATTCTAATAGCTTAAATCAGATGTCCATTTCAAATTCTGAGCAGAACATCCACAATTCTGATGTCCCAAACATCAAGTCTGTGAATGAGCAGGCTGAGAAAATTGCAGTTAAAGAAGATATCTCCTCTATCTTAAAGATAGGTTCAATCGCCATTAACCCGAAGCAGGTTGCAGCAAAACAATCTGGCATTGGTAGCCGAGAACAACTTGACATTCTTACAGTAGGCTCAGTGCCAGTTAAAGTTAATGGGTTAGCTGGCTCTTCTGGGTTCTTGAAAGTTGGCAGTATACAACTTGACCCAAAAGCATTACAACCACAAAAAGGAGATGCTGCCGCCAAAAGTAGTTTCCAAAAATAA
Protein sequence

>MS.gene67868.t1

METYDVSQARNQNAYWVEGADINSQFTSPNFEQSGVMNNEGAPEFVDQSMYYPASTNYGYYCTGFESPGEWEDQYRIFGVDGPDVQYTGGQDESFPYVYYNYGYAQSPYNPYNPYIPGAMVGVDGSYGGGQSYYTLPNYQNPAYDPLVQLDNFPDSSANSVFGASGSVSRSDGRGLKQKFNEASGNFSRNSLKLSTNQTSSEAMVSEGPRANNGRKQDLTHANVSGSRSLNAASSAVHQDRRIDASVQPVDTISNGNVISHRNQLIVASSRSGFSDFAANANGQSSVAKLRPKALGLGSSDGNVSADVLGDQNRGPRTSRSKHQLSVKAYTTKVGGGNEQDNIIIYTDQYNKEDFPLDYDNAKFFVIKSYSEDDVHKSIKYNVWSSTVHGNKKLGNAYEDTKKVSAEKSGVCPIFLFFSVNASGQFCGVAEMIGSVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNPNFRHIILENNENKPVTNSRDTQEIMYSKGLEMLKIFKNHTLKTSLLDDFMYYENRQKIMHDQKAKLLIRSFKSPVFIPALAPPRKLNIVVDKPPSKYEKNSRLKDDSNSLNQMSISNSEQNIHNSDVPNIKSVNEQAEKIAVKEDISSILKIGSIAINPKQVAAKQSGIGSREQLDILTVGSVPVKVNGLAGSSGFLKVGSIQLDPKALQPQKGDAAAKSSFQK