Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030136.t1 | XP_003609844.1 | 94.8 | 652 | 33 | 1 | 1 | 652 | 1 | 651 | 0.00E+00 | 1213.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030136.t1 | Q9LJE5 | 37.1 | 560 | 276 | 15 | 7 | 503 | 62 | 608 | 2.4e-76 | 288.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030136.t1 | G7JQ12 | 94.8 | 652 | 33 | 1 | 1 | 652 | 1 | 651 | 0.0e+00 | 1213.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030136 | MS.gene90428 | PPI |
| MS.gene030136 | MS.gene90387 | PPI |
| MS.gene030136 | MS.gene60934 | PPI |
| MS.gene030136 | MS.gene90429 | PPI |
| MS.gene030136 | MS.gene071540 | PPI |
| MS.gene90430 | MS.gene030136 | PPI |
| MS.gene071541 | MS.gene030136 | PPI |
| MS.gene030136 | MS.gene071539 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030136.t1 | MTR_4g123630 | 97.393 | 652 | 16 | 1 | 1 | 652 | 1 | 651 | 0.0 | 1310 |
| MS.gene030136.t1 | MTR_2g032660 | 66.263 | 661 | 207 | 12 | 1 | 652 | 37 | 690 | 0.0 | 845 |
| MS.gene030136.t1 | MTR_4g005110 | 41.917 | 532 | 246 | 19 | 11 | 503 | 54 | 561 | 3.84e-100 | 320 |
| MS.gene030136.t1 | MTR_2g063460 | 42.680 | 485 | 233 | 14 | 35 | 506 | 95 | 547 | 3.49e-99 | 315 |
| MS.gene030136.t1 | MTR_2g063460 | 42.680 | 485 | 233 | 14 | 35 | 506 | 93 | 545 | 3.56e-99 | 315 |
| MS.gene030136.t1 | MTR_8g088390 | 37.911 | 517 | 253 | 16 | 35 | 503 | 26 | 522 | 2.23e-85 | 280 |
| MS.gene030136.t1 | MTR_8g088390 | 37.911 | 517 | 253 | 16 | 35 | 503 | 91 | 587 | 5.60e-85 | 280 |
| MS.gene030136.t1 | MTR_7g085500 | 48.505 | 301 | 118 | 7 | 224 | 503 | 310 | 594 | 4.19e-80 | 267 |
| MS.gene030136.t1 | MTR_2g005840 | 62.434 | 189 | 71 | 0 | 315 | 503 | 233 | 421 | 4.35e-79 | 259 |
| MS.gene030136.t1 | MTR_2g005840 | 62.434 | 189 | 71 | 0 | 315 | 503 | 264 | 452 | 1.09e-78 | 259 |
| MS.gene030136.t1 | MTR_6g032970 | 53.750 | 240 | 85 | 3 | 281 | 503 | 338 | 568 | 1.24e-76 | 257 |
| MS.gene030136.t1 | MTR_2g032070 | 72.340 | 47 | 13 | 0 | 6 | 52 | 28 | 74 | 9.53e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030136.t1 | AT1G48110 | 49.547 | 662 | 283 | 16 | 4 | 642 | 5 | 638 | 0.0 | 567 |
| MS.gene030136.t1 | AT1G48110 | 49.547 | 662 | 283 | 16 | 4 | 642 | 5 | 638 | 0.0 | 567 |
| MS.gene030136.t1 | AT3G17330 | 44.344 | 663 | 262 | 17 | 1 | 636 | 1 | 583 | 1.12e-163 | 482 |
| MS.gene030136.t1 | AT3G17330 | 44.344 | 663 | 262 | 17 | 1 | 636 | 1 | 583 | 1.12e-163 | 482 |
| MS.gene030136.t1 | AT3G17330 | 42.644 | 537 | 223 | 14 | 126 | 636 | 4 | 481 | 2.14e-116 | 357 |
| MS.gene030136.t1 | AT1G79270 | 68.878 | 196 | 61 | 0 | 309 | 504 | 282 | 477 | 2.49e-89 | 287 |
| MS.gene030136.t1 | AT1G79270 | 68.878 | 196 | 61 | 0 | 309 | 504 | 282 | 477 | 2.49e-89 | 287 |
| MS.gene030136.t1 | AT1G79270 | 68.878 | 196 | 61 | 0 | 309 | 504 | 282 | 477 | 2.49e-89 | 287 |
| MS.gene030136.t1 | AT1G79270 | 68.878 | 196 | 61 | 0 | 309 | 504 | 297 | 492 | 4.92e-89 | 287 |
| MS.gene030136.t1 | AT3G13460 | 58.577 | 239 | 83 | 3 | 281 | 507 | 375 | 609 | 6.70e-89 | 291 |
| MS.gene030136.t1 | AT3G13460 | 58.577 | 239 | 83 | 3 | 281 | 507 | 378 | 612 | 7.57e-89 | 291 |
| MS.gene030136.t1 | AT3G13460 | 58.577 | 239 | 83 | 3 | 281 | 507 | 377 | 611 | 8.04e-89 | 290 |
| MS.gene030136.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 345 | 564 | 9.70e-89 | 289 |
| MS.gene030136.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 323 | 542 | 1.14e-88 | 288 |
| MS.gene030136.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 323 | 542 | 1.14e-88 | 288 |
| MS.gene030136.t1 | AT3G13060 | 60.714 | 224 | 84 | 1 | 280 | 503 | 335 | 554 | 1.21e-88 | 289 |
| MS.gene030136.t1 | AT5G61020 | 55.794 | 233 | 91 | 3 | 281 | 505 | 199 | 427 | 4.05e-83 | 270 |
| MS.gene030136.t1 | AT5G61020 | 55.794 | 233 | 91 | 3 | 281 | 505 | 201 | 429 | 4.41e-83 | 270 |
| MS.gene030136.t1 | AT5G58190 | 56.054 | 223 | 90 | 3 | 285 | 503 | 275 | 493 | 2.21e-77 | 256 |
| MS.gene030136.t1 | AT5G58190 | 56.054 | 223 | 90 | 3 | 285 | 503 | 274 | 492 | 2.34e-77 | 256 |
| MS.gene030136.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 191 | 407 | 7.08e-76 | 249 |
| MS.gene030136.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 195 | 411 | 7.92e-76 | 249 |
| MS.gene030136.t1 | AT3G03950 | 56.250 | 224 | 90 | 3 | 281 | 503 | 192 | 408 | 8.35e-76 | 249 |
| MS.gene030136.t1 | AT1G09810 | 49.821 | 279 | 121 | 4 | 227 | 501 | 94 | 357 | 7.34e-75 | 247 |
| MS.gene030136.t1 | AT1G09810 | 49.821 | 279 | 121 | 4 | 227 | 501 | 136 | 399 | 8.76e-75 | 248 |
| MS.gene030136.t1 | AT1G09810 | 49.821 | 279 | 121 | 4 | 227 | 501 | 117 | 380 | 8.84e-75 | 247 |
| MS.gene030136.t1 | AT1G27960 | 53.304 | 227 | 83 | 3 | 280 | 503 | 216 | 422 | 1.53e-74 | 247 |
| MS.gene030136.t1 | AT1G27960 | 53.304 | 227 | 83 | 3 | 280 | 503 | 290 | 496 | 5.59e-74 | 248 |
| MS.gene030136.t1 | AT3G13060 | 59.184 | 196 | 76 | 1 | 280 | 475 | 345 | 536 | 3.23e-70 | 238 |
| MS.gene030136.t1 | AT3G13460 | 55.285 | 123 | 39 | 3 | 281 | 391 | 378 | 496 | 1.77e-30 | 126 |
| MS.gene030136.t1 | AT3G13060 | 49.107 | 112 | 53 | 1 | 280 | 391 | 345 | 452 | 1.51e-24 | 107 |
| MS.gene030136.t1 | AT1G27960 | 40.441 | 136 | 58 | 3 | 280 | 412 | 290 | 405 | 9.59e-20 | 92.8 |
| MS.gene030136.t1 | AT4G11970 | 29.282 | 181 | 100 | 4 | 322 | 485 | 49 | 218 | 2.81e-15 | 78.6 |
| MS.gene030136.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 3.21e-15 | 78.2 |
| MS.gene030136.t1 | AT4G11970 | 29.282 | 181 | 100 | 4 | 322 | 485 | 49 | 218 | 4.19e-15 | 78.2 |
| MS.gene030136.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 1.55e-14 | 77.0 |
| MS.gene030136.t1 | AT4G11970 | 29.747 | 158 | 95 | 3 | 333 | 485 | 72 | 218 | 1.55e-14 | 77.0 |
Find 149 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCGGCTGTTAGTTAC+AGG | 0.207434 | 8.3:-5635630 | None:intergenic |
| ATTTCTTCTGTTCTGAATAT+TGG | 0.221213 | 8.3:+5636453 | MS.gene030136:CDS |
| TTTATCATGTGCCACTTTAC+AGG | 0.241019 | 8.3:-5635552 | None:intergenic |
| TAGAAGCGGTGATGTATTAT+TGG | 0.272352 | 8.3:+5634991 | MS.gene030136:CDS |
| GACTATGGATCTAATGCTAA+TGG | 0.294071 | 8.3:+5634911 | MS.gene030136:CDS |
| ATCATAGCACCTGGAATATA+AGG | 0.296402 | 8.3:-5633905 | None:intergenic |
| TTGATAGGCAGATGATGTTT+TGG | 0.300677 | 8.3:-5635046 | None:intergenic |
| TACCCTGCTCCCACCAATTA+CGG | 0.302628 | 8.3:+5633505 | MS.gene030136:CDS |
| TGTACAATAAAACCCGTAAT+TGG | 0.304533 | 8.3:-5633518 | None:intergenic |
| TCAATTGGTTCTGTATTAGA+TGG | 0.309724 | 8.3:-5636513 | None:intergenic |
| TTGCCTGCCTGTAGAGATCT+TGG | 0.313418 | 8.3:-5636624 | None:intergenic |
| TTAGCAATTTCATTGTCAAT+AGG | 0.315116 | 8.3:-5635148 | None:intergenic |
| AGAAAAGCTACTGGAAAATC+TGG | 0.315736 | 8.3:+5635289 | MS.gene030136:CDS |
| GTATATTACACACCTAACTA+TGG | 0.315879 | 8.3:+5633851 | MS.gene030136:CDS |
| GTTTCGTCTCTACCTGTCTT+GGG | 0.344280 | 8.3:-5636491 | None:intergenic |
| TTTATACTGATCAATATAAC+AGG | 0.344509 | 8.3:+5635116 | MS.gene030136:CDS |
| GAGCTGCCCCGTTGAGTAAT+GGG | 0.349853 | 8.3:+5634882 | MS.gene030136:CDS |
| ACTTCTGGCAGCAAGATAAA+TGG | 0.351298 | 8.3:+5635517 | MS.gene030136:CDS |
| CTCTACCTGTCTTGGGGTAA+TGG | 0.360665 | 8.3:-5636484 | None:intergenic |
| TAGCAATTTCATTGTCAATA+GGG | 0.363005 | 8.3:-5635147 | None:intergenic |
| GCTTCTGTCAATAGACTTGA+TGG | 0.366272 | 8.3:+5634073 | MS.gene030136:CDS |
| TATTATTGGGTGAACAAAAT+CGG | 0.371689 | 8.3:+5635005 | MS.gene030136:CDS |
| TCAATGCAAGTCAGAGTTAA+TGG | 0.373259 | 8.3:+5636552 | MS.gene030136:CDS |
| TATATTCCAGGTGCTATGAT+TGG | 0.373959 | 8.3:+5633908 | MS.gene030136:CDS |
| AATATAAGTTGGCGAAGAAA+TGG | 0.379570 | 8.3:-5633990 | None:intergenic |
| CCATACAATCCTTATATTCC+AGG | 0.381940 | 8.3:+5633896 | MS.gene030136:CDS |
| ACCCTGCTCCCACCAATTAC+GGG | 0.382161 | 8.3:+5633506 | MS.gene030136:CDS |
| CTCACCGTGTACTGAATATC+AGG | 0.385752 | 8.3:-5633719 | None:intergenic |
| TGTTGACATCAATAAGGATA+TGG | 0.386422 | 8.3:+5635494 | MS.gene030136:CDS |
| ATTGGAGTTGATGGTTCATT+TGG | 0.388143 | 8.3:+5633926 | MS.gene030136:CDS |
| CTCCTTTGAATTGATTATGA+TGG | 0.392180 | 8.3:-5634862 | None:intergenic |
| GCAAAGAAAGATTCGACAAA+TGG | 0.395866 | 8.3:+5634220 | MS.gene030136:CDS |
| TCAATAAGGATATGGACTTC+TGG | 0.398499 | 8.3:+5635502 | MS.gene030136:CDS |
| ATATAAGTTGGCGAAGAAAT+GGG | 0.400966 | 8.3:-5633989 | None:intergenic |
| AAGTTTCTAATGAAGGGTTT+TGG | 0.402265 | 8.3:+5636219 | MS.gene030136:CDS |
| GAAAACTAAGTTTCTAATGA+AGG | 0.407105 | 8.3:+5636212 | MS.gene030136:CDS |
| ACCGCTTCTATTTACATCAC+TGG | 0.408688 | 8.3:-5634978 | None:intergenic |
| CAGAAAACCCATTACTCAAC+GGG | 0.408797 | 8.3:-5634889 | None:intergenic |
| GGTTTCGTCTCTACCTGTCT+TGG | 0.414202 | 8.3:-5636492 | None:intergenic |
| TAAGGATTGTATGGATTGTA+TGG | 0.416713 | 8.3:-5633887 | None:intergenic |
| TGCTTCATCACCTTCCCATC+AGG | 0.416964 | 8.3:+5634273 | MS.gene030136:CDS |
| AACCCGTAATTGGTGGGAGC+AGG | 0.422335 | 8.3:-5633508 | None:intergenic |
| TGGTCCTGTTGACATCAATA+AGG | 0.423599 | 8.3:+5635488 | MS.gene030136:CDS |
| ATCTCCCGACTTTGCTGTAT+AGG | 0.424723 | 8.3:-5635071 | None:intergenic |
| TCCTTTGAATTGATTATGAT+GGG | 0.425302 | 8.3:-5634861 | None:intergenic |
| CACTACATCTGTGGATGAAA+AGG | 0.427457 | 8.3:+5636401 | MS.gene030136:CDS |
| ATCAGACAAGTTCCTTCCTC+AGG | 0.430873 | 8.3:+5634167 | MS.gene030136:CDS |
| CCTGGAATATAAGGATTGTA+TGG | 0.432058 | 8.3:-5633896 | None:intergenic |
| TTTGCTGTATAGGCTTTGAT+AGG | 0.432522 | 8.3:-5635061 | None:intergenic |
| TTTGCCAAAGCATTAGCTCT+TGG | 0.434436 | 8.3:-5634202 | None:intergenic |
| GGTGCTATGATTGGAGTTGA+TGG | 0.439110 | 8.3:+5633917 | MS.gene030136:CDS |
| ATTATTGGGTGAACAAAATC+GGG | 0.439439 | 8.3:+5635006 | MS.gene030136:CDS |
| CTGGGAGCAACATGAACCTT+TGG | 0.447906 | 8.3:-5634959 | None:intergenic |
| ATATCCTTATTGATGTCAAC+AGG | 0.450331 | 8.3:-5635492 | None:intergenic |
| GATAATGTATAGAAAGGGTC+TGG | 0.450752 | 8.3:+5636095 | MS.gene030136:intron |
| AGAAGCGGTGATGTATTATT+GGG | 0.451767 | 8.3:+5634992 | MS.gene030136:CDS |
| ATGTGCCTAAAATTTCCATT+TGG | 0.458334 | 8.3:-5635582 | None:intergenic |
| GGAGTTGATGGTTCATTTGG+AGG | 0.459454 | 8.3:+5633929 | MS.gene030136:CDS |
| AGCATTAGCTCTTGGCCCCT+CGG | 0.460855 | 8.3:-5634194 | None:intergenic |
| CCGACTGTGACAACATCAAT+TGG | 0.462977 | 8.3:-5636528 | None:intergenic |
| ATGATAAAAGATGTGCCAAA+TGG | 0.472322 | 8.3:+5635567 | MS.gene030136:CDS |
| AAATTAAGAAAACCACTGTT+AGG | 0.473007 | 8.3:-5634250 | None:intergenic |
| GATTTGAATCACCTGGTGAA+TGG | 0.474628 | 8.3:+5633663 | MS.gene030136:CDS |
| GACTGTGCAAATCCATAGTT+AGG | 0.475651 | 8.3:-5633863 | None:intergenic |
| ACTATGGATCTAATGCTAAT+GGG | 0.477126 | 8.3:+5634912 | MS.gene030136:CDS |
| AAAACATTATTCAGCTTTCG+AGG | 0.481363 | 8.3:-5636264 | None:intergenic |
| CCTCCTGCATGACCTTCTGT+CGG | 0.484140 | 8.3:-5636188 | None:intergenic |
| ATGGGGCAAAACATTTCCAT+TGG | 0.484243 | 8.3:-5634843 | None:intergenic |
| TTAGGTGTGTAATATACATA+AGG | 0.485977 | 8.3:-5633845 | None:intergenic |
| ACCGAAAAGAAAAGAAAGAT+AGG | 0.487885 | 8.3:-5635319 | None:intergenic |
| TGTGCAGATAATGTATAGAA+AGG | 0.489425 | 8.3:+5636089 | MS.gene030136:intron |
| ATTTGAATCACCTGGTGAAT+GGG | 0.489938 | 8.3:+5633664 | MS.gene030136:CDS |
| CCCCATCATAATCAATTCAA+AGG | 0.497677 | 8.3:+5634860 | MS.gene030136:CDS |
| AAAACTAAGTTTCTAATGAA+GGG | 0.499233 | 8.3:+5636213 | MS.gene030136:CDS |
| TTCATCCACAGATGTAGTGC+TGG | 0.503907 | 8.3:-5636397 | None:intergenic |
| CAAAGCCTATACAGCAAAGT+CGG | 0.507526 | 8.3:+5635066 | MS.gene030136:CDS |
| GAACTTGTCTGATTTGATGA+TGG | 0.508845 | 8.3:-5634157 | None:intergenic |
| GAACTATGATGAAAATTGTC+TGG | 0.512526 | 8.3:-5634025 | None:intergenic |
| TGTATACCTCTTGTGTGTCT+CGG | 0.513829 | 8.3:-5635644 | None:intergenic |
| GATGCTAGGAGAAAAGCTAC+TGG | 0.514734 | 8.3:+5635280 | MS.gene030136:CDS |
| GGGGCCAAGAGCTAATGCTT+TGG | 0.515241 | 8.3:+5634198 | MS.gene030136:CDS |
| ACTTGATCCAAGATCTCTAC+AGG | 0.515937 | 8.3:+5636617 | MS.gene030136:CDS |
| GCATTAGCTCTTGGCCCCTC+GGG | 0.520251 | 8.3:-5634193 | None:intergenic |
| CCGCTTCTATTTACATCACT+GGG | 0.521176 | 8.3:-5634977 | None:intergenic |
| TGAACAAGAGGAATATAAGT+TGG | 0.522275 | 8.3:-5634001 | None:intergenic |
| GGAGCTGCCCCGTTGAGTAA+TGG | 0.524236 | 8.3:+5634881 | MS.gene030136:CDS |
| GTCAATAGACTTGATGGAAG+AGG | 0.526422 | 8.3:+5634079 | MS.gene030136:CDS |
| TTTCGAGGTGGCGCCAACAC+TGG | 0.533894 | 8.3:-5636249 | None:intergenic |
| TCCTTCCTCAGGGTACCCGA+GGG | 0.534598 | 8.3:+5634178 | MS.gene030136:CDS |
| TTATCATGTGCCACTTTACA+GGG | 0.536336 | 8.3:-5635551 | None:intergenic |
| TTCCTTCCTCAGGGTACCCG+AGG | 0.539305 | 8.3:+5634177 | MS.gene030136:CDS |
| TGGTGGTCCTCCCATTCACC+AGG | 0.542526 | 8.3:-5633674 | None:intergenic |
| GTGCAGATAATGTATAGAAA+GGG | 0.542850 | 8.3:+5636090 | MS.gene030136:intron |
| ACCCGTAATTGGTGGGAGCA+GGG | 0.547180 | 8.3:-5633507 | None:intergenic |
| CTCTGATCAACAACAAACTC+AGG | 0.549896 | 8.3:-5633475 | None:intergenic |
| AAAGCCTATACAGCAAAGTC+GGG | 0.551116 | 8.3:+5635067 | MS.gene030136:CDS |
| TGTGGAGTTGCTGAGATGGT+TGG | 0.557085 | 8.3:+5635468 | MS.gene030136:CDS |
| GGGTAAGCTTATTACCTGAT+GGG | 0.560408 | 8.3:-5634287 | None:intergenic |
| ACAATAAAACCCGTAATTGG+TGG | 0.560985 | 8.3:-5633515 | None:intergenic |
| TGTAGAGATCTTGGATCAAG+TGG | 0.562297 | 8.3:-5636615 | None:intergenic |
| TGCAGTTTCTTGTTTCCATG+AGG | 0.563498 | 8.3:-5635244 | None:intergenic |
| AATTTAAAGACAGATGAACT+TGG | 0.563613 | 8.3:+5636315 | MS.gene030136:CDS |
| TGGCTAGGATTTGAATCACC+TGG | 0.564541 | 8.3:+5633656 | MS.gene030136:intron |
| AAATTGTCTGGTTGAACAAG+AGG | 0.565932 | 8.3:-5634013 | None:intergenic |
| TATAAGTTGGCGAAGAAATG+GGG | 0.569498 | 8.3:-5633988 | None:intergenic |
| GTGTGGTCATCAACACCTCA+TGG | 0.572729 | 8.3:+5635229 | MS.gene030136:CDS |
| ATCGGGGCCCTAGAATTAGT+AGG | 0.574334 | 8.3:+5635023 | MS.gene030136:CDS |
| CCAATTGATGTTGTCACAGT+CGG | 0.582496 | 8.3:+5636528 | MS.gene030136:CDS |
| GTGGGAGCTTCCCTGTAAAG+TGG | 0.586968 | 8.3:+5635541 | MS.gene030136:CDS |
| AACTCCACAAAATTGACCGC+TGG | 0.588632 | 8.3:-5635454 | None:intergenic |
| CCCAGTGATGTAAATAGAAG+CGG | 0.589037 | 8.3:+5634977 | MS.gene030136:CDS |
| AAGCTTATTACCTGATGGGA+AGG | 0.591653 | 8.3:-5634283 | None:intergenic |
| CAATAAAACCCGTAATTGGT+GGG | 0.592162 | 8.3:-5633514 | None:intergenic |
| AGTCACCATTACCCCAAGAC+AGG | 0.594914 | 8.3:+5636479 | MS.gene030136:CDS |
| CCCCTCGGGTACCCTGAGGA+AGG | 0.595318 | 8.3:-5634179 | None:intergenic |
| GATCCAAGATCTCTACAGGC+AGG | 0.595943 | 8.3:+5636621 | MS.gene030136:CDS |
| AAACCGACAGAAGGTCATGC+AGG | 0.599786 | 8.3:+5636185 | MS.gene030136:CDS |
| AATTGCTAAACTTCGACCAA+AGG | 0.600391 | 8.3:+5634943 | MS.gene030136:CDS |
| ACATACTTCAATTTCAAATG+CGG | 0.601687 | 8.3:+5636347 | MS.gene030136:CDS |
| AGATCTCTACAGGCAGGCAA+AGG | 0.607123 | 8.3:+5636627 | MS.gene030136:CDS |
| TTTCGTCTCTACCTGTCTTG+GGG | 0.609585 | 8.3:-5636490 | None:intergenic |
| TCAACTCCAATCATAGCACC+TGG | 0.611265 | 8.3:-5633914 | None:intergenic |
| GGCAGCAAGATAAATGGAGT+GGG | 0.612024 | 8.3:+5635523 | MS.gene030136:CDS |
| AGAGTGCTTATGAAGATGCT+AGG | 0.613434 | 8.3:+5635266 | MS.gene030136:CDS |
| TGAATCACCTGGTGAATGGG+AGG | 0.616103 | 8.3:+5633667 | MS.gene030136:CDS |
| TTCAAAGACATGTTTAACGA+AGG | 0.618250 | 8.3:+5633448 | None:intergenic |
| TTACTATGAAAACCGACAGA+AGG | 0.618618 | 8.3:+5636176 | MS.gene030136:CDS |
| CCTTTGAATTGATTATGATG+GGG | 0.619417 | 8.3:-5634860 | None:intergenic |
| TGTCACCAGCACTACATCTG+TGG | 0.635296 | 8.3:+5636392 | MS.gene030136:CDS |
| TGGCAGCAAGATAAATGGAG+TGG | 0.635971 | 8.3:+5635522 | MS.gene030136:CDS |
| TCAGACAAGTTCCTTCCTCA+GGG | 0.638045 | 8.3:+5634168 | MS.gene030136:CDS |
| TCAGAAAACCCATTACTCAA+CGG | 0.638768 | 8.3:-5634890 | None:intergenic |
| AATGGAAGTGTTCCTAACAG+TGG | 0.638957 | 8.3:+5634238 | MS.gene030136:CDS |
| TCAATGTAGGTTAATGCCAG+CGG | 0.649389 | 8.3:+5635438 | MS.gene030136:intron |
| ACATTATTCAGCTTTCGAGG+TGG | 0.659451 | 8.3:-5636261 | None:intergenic |
| AAAGCTACTGGAAAATCTGG+AGG | 0.667052 | 8.3:+5635292 | MS.gene030136:CDS |
| TGTTATAAAATCATACAGTG+AGG | 0.670580 | 8.3:+5635177 | MS.gene030136:CDS |
| GTAGAGATCTTGGATCAAGT+GGG | 0.673059 | 8.3:-5636614 | None:intergenic |
| TGGTCCTGATATTCAGTACA+CGG | 0.673378 | 8.3:+5633715 | MS.gene030136:CDS |
| TTGGCCCCTCGGGTACCCTG+AGG | 0.673523 | 8.3:-5634183 | None:intergenic |
| AAAGCATTAAATATAACGTG+TGG | 0.673580 | 8.3:+5635212 | MS.gene030136:CDS |
| TAACAGCCGAGACACACAAG+AGG | 0.680258 | 8.3:+5635638 | MS.gene030136:CDS |
| CCTTCCTCAGGGTACCCGAG+GGG | 0.684367 | 8.3:+5634179 | MS.gene030136:CDS |
| CCGACAGAAGGTCATGCAGG+AGG | 0.689597 | 8.3:+5636188 | MS.gene030136:CDS |
| TGAAAAGGTTGAGAATGATG+TGG | 0.715647 | 8.3:+5636416 | MS.gene030136:CDS |
| TTATTGGGTGAACAAAATCG+GGG | 0.719539 | 8.3:+5635007 | MS.gene030136:CDS |
| TTATACTGATCAATATAACA+GGG | 0.725652 | 8.3:+5635117 | MS.gene030136:CDS |
| TACTGATCAATATAACAGGG+AGG | 0.738774 | 8.3:+5635120 | MS.gene030136:CDS |
| AGAAAACCCATTACTCAACG+GGG | 0.769685 | 8.3:-5634888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTATATACCTTTTAA+AGG | + | chr8.3:5635954-5635973 | MS.gene030136:intron | 15.0% |
| !! | AAAACTAAGTTTCTAATGAA+GGG | + | chr8.3:5636213-5636232 | MS.gene030136:CDS | 20.0% |
| !! | TTATACTGATCAATATAACA+GGG | + | chr8.3:5635117-5635136 | MS.gene030136:CDS | 20.0% |
| !! | TTTATACTGATCAATATAAC+AGG | + | chr8.3:5635116-5635135 | MS.gene030136:CDS | 20.0% |
| !!! | ATGGTACTTTTTTTATGAAA+AGG | + | chr8.3:5634586-5634605 | MS.gene030136:intron | 20.0% |
| !!! | TTTTCATAAAAAAAGTACCA+TGG | - | chr8.3:5634587-5634606 | None:intergenic | 20.0% |
| ! | AAATTAAGAAAACCACTGTT+AGG | - | chr8.3:5634253-5634272 | None:intergenic | 25.0% |
| ! | AAATTCCAATATAGCTCAAA+AGG | - | chr8.3:5634311-5634330 | None:intergenic | 25.0% |
| ! | AATTCCAATATAGCTCAAAA+GGG | - | chr8.3:5634310-5634329 | None:intergenic | 25.0% |
| ! | AATTTAAAGACAGATGAACT+TGG | + | chr8.3:5636315-5636334 | MS.gene030136:CDS | 25.0% |
| ! | ACATACTTCAATTTCAAATG+CGG | + | chr8.3:5636347-5636366 | MS.gene030136:CDS | 25.0% |
| ! | ATTGTTCGAATTTGTGAATA+TGG | + | chr8.3:5635787-5635806 | MS.gene030136:intron | 25.0% |
| ! | GAAAACTAAGTTTCTAATGA+AGG | + | chr8.3:5636212-5636231 | MS.gene030136:CDS | 25.0% |
| ! | GTCAAAATTATATTAACAGC+AGG | - | chr8.3:5636049-5636068 | None:intergenic | 25.0% |
| ! | TAAAATTGATAAGTGTTCCT+GGG | + | chr8.3:5635698-5635717 | MS.gene030136:intron | 25.0% |
| ! | TAACCTACATTGAAAAAGAA+CGG | - | chr8.3:5635431-5635450 | None:intergenic | 25.0% |
| ! | TAGCAAGTTACTACTATTAT+AGG | + | chr8.3:5634552-5634571 | MS.gene030136:intron | 25.0% |
| ! | TAGCAATTTCATTGTCAATA+GGG | - | chr8.3:5635150-5635169 | None:intergenic | 25.0% |
| ! | TATTATTGGGTGAACAAAAT+CGG | + | chr8.3:5635005-5635024 | MS.gene030136:CDS | 25.0% |
| ! | TCCTTTGAATTGATTATGAT+GGG | - | chr8.3:5634864-5634883 | None:intergenic | 25.0% |
| ! | TGTTATAAAATCATACAGTG+AGG | + | chr8.3:5635177-5635196 | MS.gene030136:CDS | 25.0% |
| ! | TTAAAATTGATAAGTGTTCC+TGG | + | chr8.3:5635697-5635716 | MS.gene030136:intron | 25.0% |
| ! | TTAGCAATTTCATTGTCAAT+AGG | - | chr8.3:5635151-5635170 | None:intergenic | 25.0% |
| ! | TTAGGTGTGTAATATACATA+AGG | - | chr8.3:5633848-5633867 | None:intergenic | 25.0% |
| !! | AAAGCATTAAATATAACGTG+TGG | + | chr8.3:5635212-5635231 | MS.gene030136:CDS | 25.0% |
| !! | ATTTCTTCTGTTCTGAATAT+TGG | + | chr8.3:5636453-5636472 | MS.gene030136:CDS | 25.0% |
| !! | TCCTATCTTTCTTTTCTTTT+CGG | + | chr8.3:5635318-5635337 | MS.gene030136:CDS | 25.0% |
| !!! | TAAAAAAAGTACCATGGAAA+AGG | - | chr8.3:5634581-5634600 | None:intergenic | 25.0% |
| !!! | TACATAAGTTTTAGAAGTAC+AGG | - | chr8.3:5635370-5635389 | None:intergenic | 25.0% |
| !!! | TTATTAGTTTGTGAACTTTG+TGG | + | chr8.3:5634636-5634655 | MS.gene030136:intron | 25.0% |
| AAAAATAATCACCGTACCTT+TGG | + | chr8.3:5633550-5633569 | MS.gene030136:intron | 30.0% | |
| AAAACATTATTCAGCTTTCG+AGG | - | chr8.3:5636267-5636286 | None:intergenic | 30.0% | |
| AAACATGTCAAAAGCAAAAG+TGG | - | chr8.3:5634502-5634521 | None:intergenic | 30.0% | |
| AACATGTCAAAAGCAAAAGT+GGG | - | chr8.3:5634501-5634520 | None:intergenic | 30.0% | |
| AACCTACATTGAAAAAGAAC+GGG | - | chr8.3:5635430-5635449 | None:intergenic | 30.0% | |
| ACCGAAAAGAAAAGAAAGAT+AGG | - | chr8.3:5635322-5635341 | None:intergenic | 30.0% | |
| ACTATGGATCTAATGCTAAT+GGG | + | chr8.3:5634912-5634931 | MS.gene030136:CDS | 30.0% | |
| ATATCCTTATTGATGTCAAC+AGG | - | chr8.3:5635495-5635514 | None:intergenic | 30.0% | |
| ATGATAAAAGATGTGCCAAA+TGG | + | chr8.3:5635567-5635586 | MS.gene030136:CDS | 30.0% | |
| ATGTGCCTAAAATTTCCATT+TGG | - | chr8.3:5635585-5635604 | None:intergenic | 30.0% | |
| ATTATTGGGTGAACAAAATC+GGG | + | chr8.3:5635006-5635025 | MS.gene030136:CDS | 30.0% | |
| CATAAGCTGGTAAAAAATGT+GGG | + | chr8.3:5635977-5635996 | MS.gene030136:intron | 30.0% | |
| CATCTACACCAAAAATTCTA+TGG | - | chr8.3:5633697-5633716 | None:intergenic | 30.0% | |
| CCTTTGAATTGATTATGATG+GGG | - | chr8.3:5634863-5634882 | None:intergenic | 30.0% | |
| CTCCTTTGAATTGATTATGA+TGG | - | chr8.3:5634865-5634884 | None:intergenic | 30.0% | |
| GAACTATGATGAAAATTGTC+TGG | - | chr8.3:5634028-5634047 | None:intergenic | 30.0% | |
| GAATAGTGTGTTTATATGGA+AGG | + | chr8.3:5634438-5634457 | MS.gene030136:intron | 30.0% | |
| GTATATTACACACCTAACTA+TGG | + | chr8.3:5633851-5633870 | MS.gene030136:CDS | 30.0% | |
| GTGCAGATAATGTATAGAAA+GGG | + | chr8.3:5636090-5636109 | MS.gene030136:intron | 30.0% | |
| TACTCAATTGTTTCCTAACA+AGG | - | chr8.3:5635818-5635837 | None:intergenic | 30.0% | |
| TCAACTAAAAACTTGCATGT+CGG | - | chr8.3:5635735-5635754 | None:intergenic | 30.0% | |
| TGAACAAGAGGAATATAAGT+TGG | - | chr8.3:5634004-5634023 | None:intergenic | 30.0% | |
| TGTACAATAAAACCCGTAAT+TGG | - | chr8.3:5633521-5633540 | None:intergenic | 30.0% | |
| TGTCTCAATGATGTAAATGT+TGG | + | chr8.3:5635920-5635939 | MS.gene030136:intron | 30.0% | |
| TGTGCAGATAATGTATAGAA+AGG | + | chr8.3:5636089-5636108 | MS.gene030136:intron | 30.0% | |
| TGTTGACATCAATAAGGATA+TGG | + | chr8.3:5635494-5635513 | MS.gene030136:CDS | 30.0% | |
| TTACATCATTGAGACAATCA+AGG | - | chr8.3:5635916-5635935 | None:intergenic | 30.0% | |
| TTGTTAGGAAACAATTGAGT+AGG | + | chr8.3:5635817-5635836 | MS.gene030136:intron | 30.0% | |
| ! | AAATGCTTCTTTCTTTTCCA+GGG | + | chr8.3:5633803-5633822 | MS.gene030136:intron | 30.0% |
| ! | AAATTTTTCTCATCACTTGC+AGG | - | chr8.3:5636300-5636319 | None:intergenic | 30.0% |
| ! | AAGTTTCTAATGAAGGGTTT+TGG | + | chr8.3:5636219-5636238 | MS.gene030136:CDS | 30.0% |
| ! | AATATAAGTTGGCGAAGAAA+TGG | - | chr8.3:5633993-5634012 | None:intergenic | 30.0% |
| ! | AATTGTGTTGTTGTATTTGC+TGG | + | chr8.3:5634689-5634708 | MS.gene030136:intron | 30.0% |
| ! | ATAGCTATATTTTCCTTCTG+TGG | + | chr8.3:5634769-5634788 | MS.gene030136:intron | 30.0% |
| ! | ATATAAGTTGGCGAAGAAAT+GGG | - | chr8.3:5633992-5634011 | None:intergenic | 30.0% |
| ! | ATGTGCCAAATGGAAATTTT+AGG | + | chr8.3:5635577-5635596 | MS.gene030136:CDS | 30.0% |
| ! | GTGTTTATATGGAAGGATTT+TGG | + | chr8.3:5634445-5634464 | MS.gene030136:intron | 30.0% |
| ! | TAAATGCTTCTTTCTTTTCC+AGG | + | chr8.3:5633802-5633821 | MS.gene030136:intron | 30.0% |
| ! | TAAGGATTGTATGGATTGTA+TGG | - | chr8.3:5633890-5633909 | None:intergenic | 30.0% |
| ! | TTTTATGAAAAGGACATGCT+TGG | + | chr8.3:5634596-5634615 | MS.gene030136:intron | 30.0% |
| !! | AAAGGTACGGTGATTATTTT+TGG | - | chr8.3:5633551-5633570 | None:intergenic | 30.0% |
| !! | AAATGGGGTTTTGATAATTG+GGG | - | chr8.3:5633976-5633995 | None:intergenic | 30.0% |
| !! | AGAAATGGGGTTTTGATAAT+TGG | - | chr8.3:5633978-5633997 | None:intergenic | 30.0% |
| !! | CTTTTGCTTTTGACATGTTT+AGG | + | chr8.3:5634502-5634521 | MS.gene030136:intron | 30.0% |
| !! | GAAATGGGGTTTTGATAATT+GGG | - | chr8.3:5633977-5633996 | None:intergenic | 30.0% |
| !! | TCAATTGGTTCTGTATTAGA+TGG | - | chr8.3:5636516-5636535 | None:intergenic | 30.0% |
| !!! | AATTACGGGTTTTATTGTAC+AGG | + | chr8.3:5633520-5633539 | MS.gene030136:CDS | 30.0% |
| !!! | CATAGAATTTTTGGTGTAGA+TGG | + | chr8.3:5633695-5633714 | MS.gene030136:CDS | 30.0% |
| !!! | TCTGTAGATACTTTTTCCAA+TGG | + | chr8.3:5634827-5634846 | MS.gene030136:CDS | 30.0% |
| AAATTGTCTGGTTGAACAAG+AGG | - | chr8.3:5634016-5634035 | None:intergenic | 35.0% | |
| AATTATGTGTGCATGCGATT+AGG | - | chr8.3:5635857-5635876 | None:intergenic | 35.0% | |
| AATTGCTAAACTTCGACCAA+AGG | + | chr8.3:5634943-5634962 | MS.gene030136:CDS | 35.0% | |
| ACAATAAAACCCGTAATTGG+TGG | - | chr8.3:5633518-5633537 | None:intergenic | 35.0% | |
| ACATGTCAAAAGCAAAAGTG+GGG | - | chr8.3:5634500-5634519 | None:intergenic | 35.0% | |
| AGAAAAGCTACTGGAAAATC+TGG | + | chr8.3:5635289-5635308 | MS.gene030136:CDS | 35.0% | |
| AGAAGCGGTGATGTATTATT+GGG | + | chr8.3:5634992-5635011 | MS.gene030136:CDS | 35.0% | |
| ATCATAGCACCTGGAATATA+AGG | - | chr8.3:5633908-5633927 | None:intergenic | 35.0% | |
| ATTATCTGCACATGAGGAAT+GGG | - | chr8.3:5636081-5636100 | None:intergenic | 35.0% | |
| ATTTGAATCACCTGGTGAAT+GGG | + | chr8.3:5633664-5633683 | MS.gene030136:CDS | 35.0% | |
| CAATAAAACCCGTAATTGGT+GGG | - | chr8.3:5633517-5633536 | None:intergenic | 35.0% | |
| CCATACAATCCTTATATTCC+AGG | + | chr8.3:5633896-5633915 | MS.gene030136:CDS | 35.0% | |
| CCCCATCATAATCAATTCAA+AGG | + | chr8.3:5634860-5634879 | MS.gene030136:CDS | 35.0% | |
| CCTGGAATATAAGGATTGTA+TGG | - | chr8.3:5633899-5633918 | None:intergenic | 35.0% | |
| CTACACCAAAAATTCTATGG+TGG | - | chr8.3:5633694-5633713 | None:intergenic | 35.0% | |
| CTATACATTATCTGCACATG+AGG | - | chr8.3:5636087-5636106 | None:intergenic | 35.0% | |
| GACTATGGATCTAATGCTAA+TGG | + | chr8.3:5634911-5634930 | MS.gene030136:CDS | 35.0% | |
| GATAATGTATAGAAAGGGTC+TGG | + | chr8.3:5636095-5636114 | MS.gene030136:intron | 35.0% | |
| GCAAAGAAAGATTCGACAAA+TGG | + | chr8.3:5634220-5634239 | MS.gene030136:CDS | 35.0% | |
| GCATAAGCTGGTAAAAAATG+TGG | + | chr8.3:5635976-5635995 | MS.gene030136:intron | 35.0% | |
| GCTGGAATAGTGTGTTTATA+TGG | + | chr8.3:5634434-5634453 | MS.gene030136:intron | 35.0% | |
| GTACACGATATATGATCAAC+CGG | - | chr8.3:5633590-5633609 | None:intergenic | 35.0% | |
| TACCAGCTTATGCCTTTAAA+AGG | - | chr8.3:5635969-5635988 | None:intergenic | 35.0% | |
| TACTGATCAATATAACAGGG+AGG | + | chr8.3:5635120-5635139 | MS.gene030136:CDS | 35.0% | |
| TAGAAGCGGTGATGTATTAT+TGG | + | chr8.3:5634991-5635010 | MS.gene030136:CDS | 35.0% | |
| TAGCCACAAAAAATACCAAG+TGG | - | chr8.3:5633642-5633661 | None:intergenic | 35.0% | |
| TATGACACACAAGACACATA+CGG | - | chr8.3:5633762-5633781 | None:intergenic | 35.0% | |
| TCAATAAGGATATGGACTTC+TGG | + | chr8.3:5635502-5635521 | MS.gene030136:CDS | 35.0% | |
| TCAATGCAAGTCAGAGTTAA+TGG | + | chr8.3:5636552-5636571 | MS.gene030136:CDS | 35.0% | |
| TCAGAAAACCCATTACTCAA+CGG | - | chr8.3:5634893-5634912 | None:intergenic | 35.0% | |
| TGAAAAGGTTGAGAATGATG+TGG | + | chr8.3:5636416-5636435 | MS.gene030136:CDS | 35.0% | |
| TGTCTTGTGTGTCATATGTT+GGG | + | chr8.3:5633766-5633785 | MS.gene030136:intron | 35.0% | |
| TTACTATGAAAACCGACAGA+AGG | + | chr8.3:5636176-5636195 | MS.gene030136:CDS | 35.0% | |
| TTATTGGGTGAACAAAATCG+GGG | + | chr8.3:5635007-5635026 | MS.gene030136:CDS | 35.0% | |
| ! | AAAGTGTTATCAATGGCAGA+AGG | - | chr8.3:5634471-5634490 | None:intergenic | 35.0% |
| ! | ATTATAGGTCACCTTTTCCA+TGG | + | chr8.3:5634567-5634586 | MS.gene030136:intron | 35.0% |
| ! | CTTACCCTTTTGAGCTATAT+TGG | + | chr8.3:5634303-5634322 | MS.gene030136:intron | 35.0% |
| ! | GAACTTGTCTGATTTGATGA+TGG | - | chr8.3:5634160-5634179 | None:intergenic | 35.0% |
| ! | GAAGCATTTAAATCAGCTGT+CGG | - | chr8.3:5633792-5633811 | None:intergenic | 35.0% |
| ! | GCTTGACAAAGTGTTATCAA+TGG | - | chr8.3:5634478-5634497 | None:intergenic | 35.0% |
| ! | TATAAGTTGGCGAAGAAATG+GGG | - | chr8.3:5633991-5634010 | None:intergenic | 35.0% |
| ! | TATATTCCAGGTGCTATGAT+TGG | + | chr8.3:5633908-5633927 | MS.gene030136:CDS | 35.0% |
| ! | TTGATAGGCAGATGATGTTT+TGG | - | chr8.3:5635049-5635068 | None:intergenic | 35.0% |
| ! | TTTGCTGTATAGGCTTTGAT+AGG | - | chr8.3:5635064-5635083 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTGTGGTATTGT+AGG | + | chr8.3:5634778-5634797 | MS.gene030136:intron | 35.0% |
| !! | AATGGATTTTCTGAGTCTTC+TGG | + | chr8.3:5636570-5636589 | MS.gene030136:CDS | 35.0% |
| !! | ATTGGAGTTGATGGTTCATT+TGG | + | chr8.3:5633926-5633945 | MS.gene030136:CDS | 35.0% |
| !! | GTTTTGGCCTACTAATTCTA+GGG | - | chr8.3:5635033-5635052 | None:intergenic | 35.0% |
| !! | TACCTTTTAAAGGCATAAGC+TGG | + | chr8.3:5635964-5635983 | MS.gene030136:intron | 35.0% |
| !! | TGAGTCTTCTGGTGTTTTAA+AGG | + | chr8.3:5636581-5636600 | MS.gene030136:CDS | 35.0% |
| !! | TGGAAAAAGTATCTACAGAC+TGG | - | chr8.3:5634826-5634845 | None:intergenic | 35.0% |
| !! | TTATCATGTGCCACTTTACA+GGG | - | chr8.3:5635554-5635573 | None:intergenic | 35.0% |
| !! | TTTATCATGTGCCACTTTAC+AGG | - | chr8.3:5635555-5635574 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTATACCAGTGT+TGG | + | chr8.3:5636236-5636255 | MS.gene030136:CDS | 35.0% |
| !!! | ACTTGGTATTTTTTGTGGCT+AGG | + | chr8.3:5633641-5633660 | MS.gene030136:intron | 35.0% |
| !!! | AGTAATGGGTTTTCTGACTA+TGG | + | chr8.3:5634896-5634915 | MS.gene030136:CDS | 35.0% |
| !!! | CTTCTGGTGTTTTAAAGGTT+GGG | + | chr8.3:5636586-5636605 | MS.gene030136:CDS | 35.0% |
| !!! | TCTTCTGGTGTTTTAAAGGT+TGG | + | chr8.3:5636585-5636604 | MS.gene030136:CDS | 35.0% |
| !!! | TGACCACTTGGTATTTTTTG+TGG | + | chr8.3:5633636-5633655 | MS.gene030136:intron | 35.0% |
| !!! | TGTTTTGGCCTACTAATTCT+AGG | - | chr8.3:5635034-5635053 | None:intergenic | 35.0% |
| AAACACACTATTCCAGCCTA+TGG | - | chr8.3:5634431-5634450 | None:intergenic | 40.0% | |
| AAAGCCTATACAGCAAAGTC+GGG | + | chr8.3:5635067-5635086 | MS.gene030136:CDS | 40.0% | |
| AAAGCTACTGGAAAATCTGG+AGG | + | chr8.3:5635292-5635311 | MS.gene030136:CDS | 40.0% | |
| AAGCTTATTACCTGATGGGA+AGG | - | chr8.3:5634286-5634305 | None:intergenic | 40.0% | |
| ACATTATTCAGCTTTCGAGG+TGG | - | chr8.3:5636264-5636283 | None:intergenic | 40.0% | |
| ACCGCTTCTATTTACATCAC+TGG | - | chr8.3:5634981-5635000 | None:intergenic | 40.0% | |
| ACTTCTGGCAGCAAGATAAA+TGG | + | chr8.3:5635517-5635536 | MS.gene030136:CDS | 40.0% | |
| ACTTGATCCAAGATCTCTAC+AGG | + | chr8.3:5636617-5636636 | MS.gene030136:CDS | 40.0% | |
| AGAAAACCCATTACTCAACG+GGG | - | chr8.3:5634891-5634910 | None:intergenic | 40.0% | |
| AGGGTAAGCTTATTACCTGA+TGG | - | chr8.3:5634291-5634310 | None:intergenic | 40.0% | |
| ATGAAAAGGACATGCTTGGA+GGG | + | chr8.3:5634600-5634619 | MS.gene030136:intron | 40.0% | |
| ATGACACACAAGACACATAC+GGG | - | chr8.3:5633761-5633780 | None:intergenic | 40.0% | |
| ATGGGGCAAAACATTTCCAT+TGG | - | chr8.3:5634846-5634865 | None:intergenic | 40.0% | |
| CAAACGCAGTTTGTCAAAAG+AGG | + | chr8.3:5634384-5634403 | MS.gene030136:intron | 40.0% | |
| CAAAGCCTATACAGCAAAGT+CGG | + | chr8.3:5635066-5635085 | MS.gene030136:CDS | 40.0% | |
| CACTACATCTGTGGATGAAA+AGG | + | chr8.3:5636401-5636420 | MS.gene030136:CDS | 40.0% | |
| CAGAAAACCCATTACTCAAC+GGG | - | chr8.3:5634892-5634911 | None:intergenic | 40.0% | |
| CAGTATGACTAATCGAAGGA+AGG | - | chr8.3:5635406-5635425 | None:intergenic | 40.0% | |
| CATGAGGAATGGGTATTTGA+TGG | - | chr8.3:5636071-5636090 | None:intergenic | 40.0% | |
| CATTATCTGCACATGAGGAA+TGG | - | chr8.3:5636082-5636101 | None:intergenic | 40.0% | |
| CCAATTGATGTTGTCACAGT+CGG | + | chr8.3:5636528-5636547 | MS.gene030136:CDS | 40.0% | |
| CCCAGTGATGTAAATAGAAG+CGG | + | chr8.3:5634977-5634996 | MS.gene030136:CDS | 40.0% | |
| CCGCTTCTATTTACATCACT+GGG | - | chr8.3:5634980-5634999 | None:intergenic | 40.0% | |
| CTCTGATCAACAACAAACTC+AGG | - | chr8.3:5633478-5633497 | None:intergenic | 40.0% | |
| GACTGTGCAAATCCATAGTT+AGG | - | chr8.3:5633866-5633885 | None:intergenic | 40.0% | |
| GATTTGAATCACCTGGTGAA+TGG | + | chr8.3:5633663-5633682 | MS.gene030136:CDS | 40.0% | |
| GCTTCTGTCAATAGACTTGA+TGG | + | chr8.3:5634073-5634092 | MS.gene030136:CDS | 40.0% | |
| GGGTAAGCTTATTACCTGAT+GGG | - | chr8.3:5634290-5634309 | None:intergenic | 40.0% | |
| GTAGAGATCTTGGATCAAGT+GGG | - | chr8.3:5636617-5636636 | None:intergenic | 40.0% | |
| GTCAATAGACTTGATGGAAG+AGG | + | chr8.3:5634079-5634098 | MS.gene030136:CDS | 40.0% | |
| GTGTCTTGTGTGTCATATGT+TGG | + | chr8.3:5633765-5633784 | MS.gene030136:intron | 40.0% | |
| TATGAAAAGGACATGCTTGG+AGG | + | chr8.3:5634599-5634618 | MS.gene030136:intron | 40.0% | |
| TCAATGTAGGTTAATGCCAG+CGG | + | chr8.3:5635438-5635457 | MS.gene030136:intron | 40.0% | |
| TGGTCCTGATATTCAGTACA+CGG | + | chr8.3:5633715-5633734 | MS.gene030136:CDS | 40.0% | |
| TGGTCCTGTTGACATCAATA+AGG | + | chr8.3:5635488-5635507 | MS.gene030136:CDS | 40.0% | |
| TGTAGAGATCTTGGATCAAG+TGG | - | chr8.3:5636618-5636637 | None:intergenic | 40.0% | |
| TGTATACCTCTTGTGTGTCT+CGG | - | chr8.3:5635647-5635666 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTATGAAGATGCT+AGG | + | chr8.3:5635266-5635285 | MS.gene030136:CDS | 40.0% |
| ! | ATTTTGTGGAGTTGCTGAGA+TGG | + | chr8.3:5635464-5635483 | MS.gene030136:CDS | 40.0% |
| ! | CTCTTTTGACAAACTGCGTT+TGG | - | chr8.3:5634386-5634405 | None:intergenic | 40.0% |
| ! | GAGGACCACCATAGAATTTT+TGG | + | chr8.3:5633686-5633705 | MS.gene030136:CDS | 40.0% |
| ! | TATGCACTGTATTGACCACT+TGG | + | chr8.3:5633624-5633643 | MS.gene030136:intron | 40.0% |
| ! | TGCAGTTTCTTGTTTCCATG+AGG | - | chr8.3:5635247-5635266 | None:intergenic | 40.0% |
| ! | TTTGCCAAAGCATTAGCTCT+TGG | - | chr8.3:5634205-5634224 | None:intergenic | 40.0% |
| !! | AATGGAAGTGTTCCTAACAG+TGG | + | chr8.3:5634238-5634257 | MS.gene030136:CDS | 40.0% |
| !! | GAATATGGTGTTGCCTTGTT+AGG | + | chr8.3:5635802-5635821 | MS.gene030136:intron | 40.0% |
| !!! | GACCCGTTCTTTTTCAATGT+AGG | + | chr8.3:5635425-5635444 | MS.gene030136:intron | 40.0% |
| AACTCCACAAAATTGACCGC+TGG | - | chr8.3:5635457-5635476 | None:intergenic | 45.0% | |
| AACTTTCATCTTGTGCACCC+TGG | - | chr8.3:5633823-5633842 | None:intergenic | 45.0% | |
| AATCACCGTACCTTTGGCAT+TGG | + | chr8.3:5633556-5633575 | MS.gene030136:intron | 45.0% | |
| ACTATTCCAGCCTATGGCTA+TGG | - | chr8.3:5634425-5634444 | None:intergenic | 45.0% | |
| ATCACCGTACCTTTGGCATT+GGG | + | chr8.3:5633557-5633576 | MS.gene030136:intron | 45.0% | |
| ATCAGACAAGTTCCTTCCTC+AGG | + | chr8.3:5634167-5634186 | MS.gene030136:CDS | 45.0% | |
| CCGACTGTGACAACATCAAT+TGG | - | chr8.3:5636531-5636550 | None:intergenic | 45.0% | |
| CTAGCCTACAATACCACAGA+AGG | - | chr8.3:5634785-5634804 | None:intergenic | 45.0% | |
| CTCACCGTGTACTGAATATC+AGG | - | chr8.3:5633722-5633741 | None:intergenic | 45.0% | |
| GATGCTAGGAGAAAAGCTAC+TGG | + | chr8.3:5635280-5635299 | MS.gene030136:CDS | 45.0% | |
| GGCAGCAAGATAAATGGAGT+GGG | + | chr8.3:5635523-5635542 | MS.gene030136:CDS | 45.0% | |
| GGGTCAGTATGACTAATCGA+AGG | - | chr8.3:5635410-5635429 | None:intergenic | 45.0% | |
| GTTTCGTCTCTACCTGTCTT+GGG | - | chr8.3:5636494-5636513 | None:intergenic | 45.0% | |
| TCAACTCCAATCATAGCACC+TGG | - | chr8.3:5633917-5633936 | None:intergenic | 45.0% | |
| TCAGACAAGTTCCTTCCTCA+GGG | + | chr8.3:5634168-5634187 | MS.gene030136:CDS | 45.0% | |
| TGAGCATGTCAAATCAGTGC+TGG | + | chr8.3:5634336-5634355 | MS.gene030136:intron | 45.0% | |
| TGGCAGCAAGATAAATGGAG+TGG | + | chr8.3:5635522-5635541 | MS.gene030136:CDS | 45.0% | |
| TGGCTAGGATTTGAATCACC+TGG | + | chr8.3:5633656-5633675 | MS.gene030136:intron | 45.0% | |
| TTCATCCACAGATGTAGTGC+TGG | - | chr8.3:5636400-5636419 | None:intergenic | 45.0% | |
| TTTCGTCTCTACCTGTCTTG+GGG | - | chr8.3:5636493-5636512 | None:intergenic | 45.0% | |
| ! | AATGCCAGCGGTCAATTTTG+TGG | + | chr8.3:5635450-5635469 | MS.gene030136:CDS | 45.0% |
| ! | ATCTCCCGACTTTGCTGTAT+AGG | - | chr8.3:5635074-5635093 | None:intergenic | 45.0% |
| ! | GGTGCTATGATTGGAGTTGA+TGG | + | chr8.3:5633917-5633936 | MS.gene030136:CDS | 45.0% |
| ! | TGTCGGTTATAAATGCTCCC+AGG | - | chr8.3:5635718-5635737 | None:intergenic | 45.0% |
| ! | TTTGGCATTGGGGTTGAATC+CGG | + | chr8.3:5633568-5633587 | MS.gene030136:intron | 45.0% |
| !! | AATGTGGGTTCGTCGACTTT+AGG | + | chr8.3:5635992-5636011 | MS.gene030136:intron | 45.0% |
| !! | GGAGTTGATGGTTCATTTGG+AGG | + | chr8.3:5633929-5633948 | MS.gene030136:CDS | 45.0% |
| !! | GGGGTTTTGATAATTGGGGA+GGG | - | chr8.3:5633972-5633991 | None:intergenic | 45.0% |
| !! | TGGGGTTTTGATAATTGGGG+AGG | - | chr8.3:5633973-5633992 | None:intergenic | 45.0% |
| !!! | CAGCTTCTGCTGCTTTTACT+AGG | + | chr8.3:5634122-5634141 | MS.gene030136:CDS | 45.0% |
| AAACCGACAGAAGGTCATGC+AGG | + | chr8.3:5636185-5636204 | MS.gene030136:CDS | 50.0% | |
| AGATCTCTACAGGCAGGCAA+AGG | + | chr8.3:5636627-5636646 | MS.gene030136:CDS | 50.0% | |
| AGTCACCATTACCCCAAGAC+AGG | + | chr8.3:5636479-5636498 | MS.gene030136:CDS | 50.0% | |
| ATCGGGGCCCTAGAATTAGT+AGG | + | chr8.3:5635023-5635042 | MS.gene030136:CDS | 50.0% | |
| CAACCCCAATGCCAAAGGTA+CGG | - | chr8.3:5633564-5633583 | None:intergenic | 50.0% | |
| CTCTACCTGTCTTGGGGTAA+TGG | - | chr8.3:5636487-5636506 | None:intergenic | 50.0% | |
| CTGGGAGCAACATGAACCTT+TGG | - | chr8.3:5634962-5634981 | None:intergenic | 50.0% | |
| GACAAACTGCGTTTGGCAGA+TGG | - | chr8.3:5634379-5634398 | None:intergenic | 50.0% | |
| GATCCAAGATCTCTACAGGC+AGG | + | chr8.3:5636621-5636640 | MS.gene030136:CDS | 50.0% | |
| GGATTCAACCCCAATGCCAA+AGG | - | chr8.3:5633569-5633588 | None:intergenic | 50.0% | |
| GGTTTCGTCTCTACCTGTCT+TGG | - | chr8.3:5636495-5636514 | None:intergenic | 50.0% | |
| GTGTCTCGGCTGTTAGTTAC+AGG | - | chr8.3:5635633-5635652 | None:intergenic | 50.0% | |
| GTGTGGTCATCAACACCTCA+TGG | + | chr8.3:5635229-5635248 | MS.gene030136:CDS | 50.0% | |
| TAACAGCCGAGACACACAAG+AGG | + | chr8.3:5635638-5635657 | MS.gene030136:CDS | 50.0% | |
| TACCCTGCTCCCACCAATTA+CGG | + | chr8.3:5633505-5633524 | MS.gene030136:CDS | 50.0% | |
| TCACCGTACCTTTGGCATTG+GGG | + | chr8.3:5633558-5633577 | MS.gene030136:intron | 50.0% | |
| TGAATCACCTGGTGAATGGG+AGG | + | chr8.3:5633667-5633686 | MS.gene030136:CDS | 50.0% | |
| TGCTTCATCACCTTCCCATC+AGG | + | chr8.3:5634273-5634292 | MS.gene030136:CDS | 50.0% | |
| TGTCACCAGCACTACATCTG+TGG | + | chr8.3:5636392-5636411 | MS.gene030136:CDS | 50.0% | |
| TGTGGAGTTGCTGAGATGGT+TGG | + | chr8.3:5635468-5635487 | MS.gene030136:CDS | 50.0% | |
| TTGCCTGCCTGTAGAGATCT+TGG | - | chr8.3:5636627-5636646 | None:intergenic | 50.0% | |
| TTGTCAAAAGAGGCCTGTCG+TGG | + | chr8.3:5634394-5634413 | MS.gene030136:intron | 50.0% | |
| ! | CTTTAGGAGGGTCTTCAGCT+TGG | + | chr8.3:5636008-5636027 | MS.gene030136:intron | 50.0% |
| !! | ATGTCAAATCAGTGCTGGCG+TGG | + | chr8.3:5634341-5634360 | MS.gene030136:intron | 50.0% |
| !! | TGGGTTCGTCGACTTTAGGA+GGG | + | chr8.3:5635996-5636015 | MS.gene030136:intron | 50.0% |
| AACCCGTAATTGGTGGGAGC+AGG | - | chr8.3:5633511-5633530 | None:intergenic | 55.0% | |
| ACCCGTAATTGGTGGGAGCA+GGG | - | chr8.3:5633510-5633529 | None:intergenic | 55.0% | |
| ACCCTGCTCCCACCAATTAC+GGG | + | chr8.3:5633506-5633525 | MS.gene030136:CDS | 55.0% | |
| CAAGACACATACGGGCAGAG+AGG | - | chr8.3:5633753-5633772 | None:intergenic | 55.0% | |
| CCTCCTGCATGACCTTCTGT+CGG | - | chr8.3:5636191-5636210 | None:intergenic | 55.0% | |
| GAGCTGCCCCGTTGAGTAAT+GGG | + | chr8.3:5634882-5634901 | MS.gene030136:CDS | 55.0% | |
| GGGGCCAAGAGCTAATGCTT+TGG | + | chr8.3:5634198-5634217 | MS.gene030136:CDS | 55.0% | |
| GTGGGAGCTTCCCTGTAAAG+TGG | + | chr8.3:5635541-5635560 | MS.gene030136:CDS | 55.0% | |
| ! | AGCATTAGCTCTTGGCCCCT+CGG | - | chr8.3:5634197-5634216 | None:intergenic | 55.0% |
| !! | GTGGGTTCGTCGACTTTAGG+AGG | + | chr8.3:5635995-5636014 | MS.gene030136:intron | 55.0% |
| CCGACAGAAGGTCATGCAGG+AGG | + | chr8.3:5636188-5636207 | MS.gene030136:CDS | 60.0% | |
| CGTGGCAGTGCCATAGCCAT+AGG | + | chr8.3:5634412-5634431 | MS.gene030136:intron | 60.0% | |
| GCAGTGCCATAGCCATAGGC+TGG | + | chr8.3:5634416-5634435 | MS.gene030136:intron | 60.0% | |
| GGAGCTGCCCCGTTGAGTAA+TGG | + | chr8.3:5634881-5634900 | MS.gene030136:CDS | 60.0% | |
| TGGTGGTCCTCCCATTCACC+AGG | - | chr8.3:5633677-5633696 | None:intergenic | 60.0% | |
| TTTCGAGGTGGCGCCAACAC+TGG | - | chr8.3:5636252-5636271 | None:intergenic | 60.0% | |
| ! | GCATTAGCTCTTGGCCCCTC+GGG | - | chr8.3:5634196-5634215 | None:intergenic | 60.0% |
| ! | TCCTTCCTCAGGGTACCCGA+GGG | + | chr8.3:5634178-5634197 | MS.gene030136:CDS | 60.0% |
| ! | TTCCTTCCTCAGGGTACCCG+AGG | + | chr8.3:5634177-5634196 | MS.gene030136:CDS | 60.0% |
| GGCTATGGCACTGCCACGAC+AGG | - | chr8.3:5634410-5634429 | None:intergenic | 65.0% | |
| ! | CCTTCCTCAGGGTACCCGAG+GGG | + | chr8.3:5634179-5634198 | MS.gene030136:CDS | 65.0% |
| CCCCTCGGGTACCCTGAGGA+AGG | - | chr8.3:5634182-5634201 | None:intergenic | 70.0% | |
| TTGGCCCCTCGGGTACCCTG+AGG | - | chr8.3:5634186-5634205 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 5633457 | 5636671 | 5633457 | ID=MS.gene030136 |
| chr8.3 | mRNA | 5633457 | 5636671 | 5633457 | ID=MS.gene030136.t1;Parent=MS.gene030136 |
| chr8.3 | exon | 5633457 | 5633541 | 5633457 | ID=MS.gene030136.t1.exon1;Parent=MS.gene030136.t1 |
| chr8.3 | CDS | 5633457 | 5633541 | 5633457 | ID=cds.MS.gene030136.t1;Parent=MS.gene030136.t1 |
| chr8.3 | exon | 5633663 | 5633736 | 5633663 | ID=MS.gene030136.t1.exon2;Parent=MS.gene030136.t1 |
| chr8.3 | CDS | 5633663 | 5633736 | 5633663 | ID=cds.MS.gene030136.t1;Parent=MS.gene030136.t1 |
| chr8.3 | exon | 5633824 | 5634294 | 5633824 | ID=MS.gene030136.t1.exon3;Parent=MS.gene030136.t1 |
| chr8.3 | CDS | 5633824 | 5634294 | 5633824 | ID=cds.MS.gene030136.t1;Parent=MS.gene030136.t1 |
| chr8.3 | exon | 5634800 | 5635339 | 5634800 | ID=MS.gene030136.t1.exon4;Parent=MS.gene030136.t1 |
| chr8.3 | CDS | 5634800 | 5635339 | 5634800 | ID=cds.MS.gene030136.t1;Parent=MS.gene030136.t1 |
| chr8.3 | exon | 5635447 | 5635659 | 5635447 | ID=MS.gene030136.t1.exon5;Parent=MS.gene030136.t1 |
| chr8.3 | CDS | 5635447 | 5635659 | 5635447 | ID=cds.MS.gene030136.t1;Parent=MS.gene030136.t1 |
| chr8.3 | exon | 5636096 | 5636671 | 5636096 | ID=MS.gene030136.t1.exon6;Parent=MS.gene030136.t1 |
| chr8.3 | CDS | 5636096 | 5636671 | 5636096 | ID=cds.MS.gene030136.t1;Parent=MS.gene030136.t1 |
| Gene Sequence |
| Protein sequence |
