AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55918

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55918.t1 MTR_2g032660 95.971 695 23 3 1 691 1 694 0.0 1360
MS.gene55918.t1 MTR_4g123630 67.121 660 199 10 37 687 1 651 0.0 864
MS.gene55918.t1 MTR_2g063460 64.502 231 69 2 307 532 320 542 1.24e-99 318
MS.gene55918.t1 MTR_2g063460 64.502 231 69 2 307 532 322 544 1.35e-99 318
MS.gene55918.t1 MTR_4g005110 38.550 524 269 15 46 532 54 561 5.64e-92 299
MS.gene55918.t1 MTR_8g088390 58.921 241 85 3 302 532 286 522 7.57e-88 287
MS.gene55918.t1 MTR_8g088390 58.921 241 85 3 302 532 351 587 1.59e-87 288
MS.gene55918.t1 MTR_7g085500 49.301 286 125 4 257 532 319 594 2.44e-81 271
MS.gene55918.t1 MTR_6g032970 53.101 258 100 4 289 532 318 568 2.84e-79 265
MS.gene55918.t1 MTR_2g005840 61.053 190 74 0 343 532 232 421 3.58e-77 255
MS.gene55918.t1 MTR_2g005840 61.053 190 74 0 343 532 263 452 1.45e-76 254
MS.gene55918.t1 MTR_2g032070 81.609 87 3 1 1 87 1 74 2.95e-42 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55918.t1 AT1G48110 47.872 658 307 13 36 677 1 638 0.0 555
MS.gene55918.t1 AT1G48110 47.872 658 307 13 36 677 1 638 0.0 555
MS.gene55918.t1 AT3G17330 42.415 679 264 20 37 679 1 588 4.17e-152 454
MS.gene55918.t1 AT3G17330 42.415 679 264 20 37 679 1 588 4.17e-152 454
MS.gene55918.t1 AT3G17330 48.009 427 171 9 281 679 83 486 1.20e-121 372
MS.gene55918.t1 AT3G13460 39.316 585 273 20 15 532 38 607 7.99e-95 307
MS.gene55918.t1 AT3G13460 39.316 585 273 20 15 532 39 608 8.63e-95 307
MS.gene55918.t1 AT3G13460 39.316 585 273 20 15 532 36 605 8.63e-95 307
MS.gene55918.t1 AT1G79270 68.500 200 60 1 337 533 278 477 5.97e-93 298
MS.gene55918.t1 AT1G79270 68.500 200 60 1 337 533 278 477 5.97e-93 298
MS.gene55918.t1 AT1G79270 68.500 200 60 1 337 533 278 477 5.97e-93 298
MS.gene55918.t1 AT1G79270 68.500 200 60 1 337 533 293 492 9.33e-93 298
MS.gene55918.t1 AT3G13060 60.256 234 80 3 303 532 340 564 5.02e-89 291
MS.gene55918.t1 AT3G13060 60.256 234 80 3 303 532 318 542 5.50e-89 290
MS.gene55918.t1 AT3G13060 60.256 234 80 3 303 532 318 542 5.50e-89 290
MS.gene55918.t1 AT3G13060 60.256 234 80 3 303 532 330 554 6.45e-89 291
MS.gene55918.t1 AT1G55500 54.508 244 101 2 289 526 279 518 1.92e-83 274
MS.gene55918.t1 AT1G55500 54.508 244 101 2 289 526 335 574 1.94e-83 275
MS.gene55918.t1 AT1G55500 54.508 244 101 2 289 526 292 531 2.51e-83 274
MS.gene55918.t1 AT1G55500 54.508 244 101 2 289 526 335 574 2.62e-83 275
MS.gene55918.t1 AT1G55500 54.508 244 101 2 289 526 322 561 3.47e-83 275
MS.gene55918.t1 AT1G55500 54.508 244 101 2 289 526 335 574 4.10e-83 275
MS.gene55918.t1 AT5G61020 55.000 240 97 3 302 534 192 427 9.64e-83 270
MS.gene55918.t1 AT5G61020 55.000 240 97 3 302 534 194 429 1.13e-82 270
MS.gene55918.t1 AT5G58190 54.217 249 101 5 287 532 255 493 4.24e-80 265
MS.gene55918.t1 AT5G58190 54.217 249 101 5 287 532 254 492 4.54e-80 265
MS.gene55918.t1 AT3G03950 54.918 244 101 3 289 532 173 407 4.99e-79 258
MS.gene55918.t1 AT3G03950 54.918 244 101 3 289 532 177 411 5.09e-79 259
MS.gene55918.t1 AT3G03950 54.918 244 101 3 289 532 174 408 5.42e-79 258
MS.gene55918.t1 AT1G27960 53.947 228 83 3 307 532 215 422 7.42e-77 254
MS.gene55918.t1 AT1G09810 56.019 216 91 1 343 554 170 385 9.36e-77 253
MS.gene55918.t1 AT1G09810 56.019 216 91 1 343 554 212 427 1.29e-76 254
MS.gene55918.t1 AT1G09810 56.019 216 91 1 343 554 193 408 1.98e-76 253
MS.gene55918.t1 AT1G27960 53.947 228 83 3 307 532 289 496 3.83e-76 254
MS.gene55918.t1 AT3G13060 56.682 217 77 4 303 511 340 547 2.33e-71 242
MS.gene55918.t1 AT3G13460 32.981 473 235 20 15 420 39 496 3.10e-33 134
MS.gene55918.t1 AT3G13060 48.361 122 50 3 303 420 340 452 8.60e-24 105
MS.gene55918.t1 AT1G27960 45.299 117 42 3 307 421 289 385 2.48e-20 94.7
MS.gene55918.t1 AT4G11970 29.747 158 95 3 362 514 72 218 1.58e-14 76.6
MS.gene55918.t1 AT4G11970 29.747 158 95 3 362 514 72 218 2.08e-14 75.9
MS.gene55918.t1 AT4G11970 29.747 158 95 3 362 514 72 218 2.46e-14 75.9
MS.gene55918.t1 AT4G11970 29.747 158 95 3 362 514 72 218 1.15e-13 74.3
MS.gene55918.t1 AT4G11970 29.747 158 95 3 362 514 72 218 1.15e-13 74.3

Find 149 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGGTTAGCTGGCTCTTC+TGG 0.117523 2.3:-57877996 MS.gene55918:CDS
TACCCTGCTTCCACCAATTA+TGG 0.150443 2.3:-57881419 MS.gene55918:CDS
TTGACACATGCAAATGTTTC+TGG 0.179968 2.3:-57880744 MS.gene55918:CDS
AGTATGATGTGCCTAAAATT+TGG 0.182955 2.3:+57879661 None:intergenic
GTATCCCTGCTATTAGTTAC+TGG 0.224610 2.3:+57879619 None:intergenic
ACTCCAGATTGTTCAAAGTT+TGG 0.250796 2.3:+57881488 None:intergenic
TGAATTCTTCTCATACTTGC+TGG 0.263385 2.3:+57878277 None:intergenic
TGGCTCTGTTGACTTTAATA+AGG 0.265086 2.3:-57879761 MS.gene55918:CDS
TCAGTGCCAGTTAAAGTTAA+TGG 0.268987 2.3:-57878014 MS.gene55918:CDS
TGCAACCTGCTTCGGGTTAA+TGG 0.270209 2.3:+57878091 None:intergenic
GCTAACCCATTAACTTTAAC+TGG 0.275132 2.3:+57878008 None:intergenic
CCGTATGTATATTACAACTA+TGG 0.288528 2.3:-57881113 MS.gene55918:CDS
CTCCAGATTGTTCAAAGTTT+GGG 0.301535 2.3:+57881489 None:intergenic
TGTACAATAATACCCATAAT+TGG 0.317280 2.3:+57881406 None:intergenic
TTTATGATATGCCACTTAAC+AGG 0.319471 2.3:+57879697 None:intergenic
ATGGGTTAGCTGGCTCTTCT+GGG 0.325136 2.3:-57877995 MS.gene55918:CDS
CCAGGTATATACGGATTATA+TGG 0.326972 2.3:+57881068 None:intergenic
TCATTCACAGACTTGATGTT+TGG 0.330984 2.3:+57878176 None:intergenic
AAATTACCCAGTAAGCATTC+TGG 0.345258 2.3:+57881693 None:intergenic
CAAAAGTTCAATGAAGCTTC+TGG 0.348903 2.3:-57880867 MS.gene55918:CDS
GATCCTAGTCCTAGGGCCTT+TGG 0.349547 2.3:+57880319 None:intergenic
ATGCTCTGATCAACAAATTC+AGG 0.351771 2.3:+57881446 None:intergenic
CTAGGAACCAGAATGCTTAC+TGG 0.356092 2.3:-57881700 MS.gene55918:CDS
CCTGTAGATACTATCTCTAA+TGG 0.362924 2.3:-57880448 MS.gene55918:CDS
ATGTGCCTAAAATTTGGATT+TGG 0.363738 2.3:+57879667 None:intergenic
CTCGTTACCACCTCCTACCT+TGG 0.368057 2.3:+57880198 None:intergenic
AGTTCTGCAAACTCCGTGTT+TGG 0.378137 2.3:-57880933 MS.gene55918:CDS
TTAATAAGGACATGGACTTT+TGG 0.378991 2.3:-57879747 MS.gene55918:CDS
CATTCACAGACTTGATGTTT+GGG 0.382329 2.3:+57878177 None:intergenic
CAGTGCCAGTTAAAGTTAAT+GGG 0.383647 2.3:-57878013 MS.gene55918:CDS
ACCCTGCTTCCACCAATTAT+GGG 0.384468 2.3:-57881418 MS.gene55918:CDS
ACCATGGCACCAGGTATATA+CGG 0.392677 2.3:+57881059 None:intergenic
AAAGCATTACAACCACAAAA+AGG 0.392730 2.3:-57877939 MS.gene55918:CDS
GAAACTTCTGATTAGGAGCT+TGG 0.393810 2.3:+57878367 None:intergenic
ACGGAGTTTGCAGAACTATC+AGG 0.395503 2.3:+57880939 None:intergenic
TGAACCTATCTTTAAGATAG+AGG 0.398400 2.3:+57878118 None:intergenic
GCCAATGCTGGTATGAATAC+TGG 0.398898 2.3:+57878338 None:intergenic
GTGTGGTCTTCTACAGTTCA+TGG 0.411680 2.3:-57880046 MS.gene55918:CDS
TAAGAATGTCAAGTTGTTCT+CGG 0.421487 2.3:+57878045 None:intergenic
CATCACTTGATCCTAGTCCT+AGG 0.422765 2.3:+57880311 None:intergenic
AGCATCATCTGCTGTTCATC+AGG 0.423199 2.3:-57880703 MS.gene55918:intron
TACGGATTATATGGATTGTA+TGG 0.425791 2.3:+57881077 None:intergenic
GGAAATCCTCCTTGTTGTAT+TGG 0.428102 2.3:+57880149 None:intergenic
GAATTCTTCTCATACTTGCT+GGG 0.432505 2.3:+57878278 None:intergenic
CTCACCGTGTACTGGACATC+TGG 0.433997 2.3:+57881229 None:intergenic
TCTTCTGGGTTCTTGAAAGT+TGG 0.434025 2.3:-57877981 MS.gene55918:CDS
AGCCCAAACTTTGAACAATC+TGG 0.434855 2.3:-57881491 MS.gene55918:CDS
TACCCATAATTGGTGGAAGC+AGG 0.435738 2.3:+57881416 None:intergenic
GTAGGAGTTGATGGCTCATA+TGG 0.439213 2.3:-57881038 MS.gene55918:CDS
CTGTAGATACTATCTCTAAT+GGG 0.443517 2.3:-57880447 MS.gene55918:CDS
AAATGTTAGTGCTGATGTAT+TGG 0.445062 2.3:-57880287 MS.gene55918:CDS
GTTCTGCTCAGAATTTGAAA+TGG 0.453546 2.3:+57878217 None:intergenic
CCCTTCTGATACCATGGCCT+CGG 0.454290 2.3:+57880797 None:intergenic
GGTGCCATGGTAGGAGTTGA+TGG 0.455986 2.3:-57881047 MS.gene55918:CDS
GATAATGTATTCTAAAGGAT+TGG 0.459236 2.3:-57878489 MS.gene55918:CDS
TGTGGAGTTGCAGAGATGAT+TGG 0.464797 2.3:-57879781 MS.gene55918:CDS
AGGCCAAAGGCCCTAGGACT+AGG 0.465607 2.3:-57880322 MS.gene55918:CDS
GTTAAAGTTAATGGGTTAGC+TGG 0.467289 2.3:-57878005 MS.gene55918:CDS
GATTCGAATCACCCGGTGAA+TGG 0.467931 2.3:-57881285 MS.gene55918:CDS
TTCCTCCCATTGTTAGCTCT+CGG 0.469671 2.3:+57880774 None:intergenic
AATTATGGGTATTATTGTAC+AGG 0.476299 2.3:-57881404 MS.gene55918:intron
ATACTGGTCCTCCCATTCAC+CGG 0.477464 2.3:+57881273 None:intergenic
GCAAGTATGAGAAGAATTCA+AGG 0.480414 2.3:-57878274 MS.gene55918:CDS
AGTTCATGGAAACAAGAAGT+TGG 0.483158 2.3:-57880032 MS.gene55918:CDS
ATTCGAATCACCCGGTGAAT+GGG 0.484015 2.3:-57881284 MS.gene55918:CDS
TAGTCAGACTCACCGTGTAC+TGG 0.484610 2.3:+57881221 None:intergenic
CAGGTTGCAGCAAAACAATC+TGG 0.488120 2.3:-57878077 MS.gene55918:CDS
GTTCATGGAAACAAGAAGTT+GGG 0.488312 2.3:-57880031 MS.gene55918:CDS
TGCTCTGATCAACAAATTCA+GGG 0.491217 2.3:+57881447 None:intergenic
GTGGAAGCTTTCCTGTTAAG+TGG 0.491998 2.3:-57879708 MS.gene55918:CDS
ACAAGCCAGTAACTAATAGC+AGG 0.497088 2.3:-57879624 MS.gene55918:CDS
ATCCTCCTTGTTGTATTGGT+CGG 0.502648 2.3:+57880153 None:intergenic
ACAACAATATTCAACTTTCG+AGG 0.503642 2.3:+57878311 None:intergenic
AATGTTAGTGCTGATGTATT+GGG 0.510099 2.3:-57880286 MS.gene55918:CDS
TGAACAAGGGGATCATAAGC+AGG 0.511266 2.3:+57880975 None:intergenic
ATCTCCTCTATCTTAAAGAT+AGG 0.511747 2.3:-57878122 MS.gene55918:CDS
TTTCGAGGAGGTGCCAATGC+TGG 0.512758 2.3:+57878326 None:intergenic
CCATATAATCCGTATATACC+TGG 0.512895 2.3:-57881068 MS.gene55918:CDS
GAAGTTGGGAAATGCTTATG+AGG 0.513881 2.3:-57880017 MS.gene55918:CDS
AATCGCCATTAACCCGAAGC+AGG 0.514583 2.3:-57878096 MS.gene55918:CDS
TCCAGTATTCATACCAGCAT+TGG 0.514740 2.3:-57878339 MS.gene55918:CDS
ATCACTTGATCCTAGTCCTA+GGG 0.516411 2.3:+57880312 None:intergenic
ATGCAAATGTTTCTGGAAGC+AGG 0.519305 2.3:-57880737 MS.gene55918:CDS
TCAAACAAGTTCCGAGGCCA+TGG 0.528567 2.3:-57880808 MS.gene55918:CDS
CCATTAGAGATAGTATCTAC+AGG 0.528741 2.3:+57880448 None:intergenic
ATAGTAGCTTCTTCACGAAG+TGG 0.535163 2.3:-57880397 MS.gene55918:CDS
TGGCAGATAATGTATTCTAA+AGG 0.535367 2.3:-57878494 MS.gene55918:intron
ACCCATAATTGGTGGAAGCA+GGG 0.538655 2.3:+57881417 None:intergenic
GTGAATGGGAGGACCAGTAT+AGG 0.542108 2.3:-57881270 MS.gene55918:CDS
CAACTTGACATTCTTACAGT+AGG 0.545279 2.3:-57878038 MS.gene55918:CDS
TCTGGAGTAATGAATAATGA+AGG 0.545782 2.3:-57881473 MS.gene55918:CDS
CATCAAGTCTGTGAATGAGC+AGG 0.551415 2.3:-57878171 MS.gene55918:CDS
AGTCTTCAGTTGCTAAGCTT+AGG 0.552338 2.3:-57880342 MS.gene55918:CDS
AGTTGCTAAGCTTAGGCCAA+AGG 0.552702 2.3:-57880335 MS.gene55918:CDS
AAGGGCCGAGAGCTAACAAT+GGG 0.557060 2.3:-57880779 MS.gene55918:CDS
TCTCGGCCCTTCTGATACCA+TGG 0.560650 2.3:+57880791 None:intergenic
CCATAGTTGTAATATACATA+CGG 0.561725 2.3:+57881113 None:intergenic
CGTATGATGTTTCTCAAGCT+AGG 0.561789 2.3:-57881718 MS.gene55918:CDS
TGAGAAGAATTCAAGGCTCA+AGG 0.565493 2.3:-57878267 MS.gene55918:CDS
TCCGTATATACCTGGTGCCA+TGG 0.566479 2.3:-57881060 MS.gene55918:CDS
TACTGGTCCTCCCATTCACC+GGG 0.566938 2.3:+57881274 None:intergenic
TGTTTGGGACATCAGAATTG+TGG 0.568309 2.3:+57878192 None:intergenic
TCCGAGGCCATGGTATCAGA+AGG 0.568894 2.3:-57880798 MS.gene55918:CDS
GCAGCAAAACAATCTGGCAT+TGG 0.571218 2.3:-57878071 MS.gene55918:CDS
ACAATAATACCCATAATTGG+TGG 0.572117 2.3:+57881409 None:intergenic
AAGCTTAGGCCAAAGGCCCT+AGG 0.576887 2.3:-57880328 MS.gene55918:CDS
TATATACCTGGTGCCATGGT+AGG 0.577950 2.3:-57881056 MS.gene55918:CDS
ACTTCTGCTTACAGAACCGC+TGG 0.578505 2.3:+57880908 None:intergenic
GTGATCAAAATCGAGGCCCT+AGG 0.582768 2.3:-57880264 MS.gene55918:CDS
TTGCATTATCATAGTCAAGA+GGG 0.582783 2.3:+57880128 None:intergenic
GTAAGCAGAAGTGATGGAAG+AGG 0.583085 2.3:-57880897 MS.gene55918:CDS
TTCTTCTCATACTTGCTGGG+TGG 0.584664 2.3:+57878281 None:intergenic
TTTGCATTATCATAGTCAAG+AGG 0.589581 2.3:+57880127 None:intergenic
AACTCCGTGTTTGGAGCCAG+CGG 0.593659 2.3:-57880924 MS.gene55918:CDS
AAAGCTTATACGACCAAGGT+AGG 0.595919 2.3:-57880211 MS.gene55918:CDS
TAGGAACCAGAATGCTTACT+GGG 0.603432 2.3:-57881699 MS.gene55918:intron
AAAATTGTCTAGTTGAACAA+GGG 0.608179 2.3:+57880962 None:intergenic
CGAATCACCCGGTGAATGGG+AGG 0.610737 2.3:-57881281 MS.gene55918:CDS
GTTGATGGCTCATATGGAGG+AGG 0.610742 2.3:-57881032 MS.gene55918:CDS
TGTTGACTTTAATAAGGACA+TGG 0.611375 2.3:-57879755 MS.gene55918:CDS
GAAAATTGTCTAGTTGAACA+AGG 0.611684 2.3:+57880961 None:intergenic
GATTTAGGATTCGAATCACC+CGG 0.616404 2.3:-57881292 MS.gene55918:intron
AACAAATCAAACAAGTTCCG+AGG 0.617188 2.3:-57880814 MS.gene55918:CDS
GAACAAGGGGATCATAAGCA+GGG 0.617569 2.3:+57880976 None:intergenic
TGAGCCATCAACTCCTACCA+TGG 0.618664 2.3:+57881043 None:intergenic
GTTATGCAGGTTAATGCTAG+CGG 0.619200 2.3:-57879811 MS.gene55918:intron
CAAGCCAGTAACTAATAGCA+GGG 0.620618 2.3:-57879623 MS.gene55918:CDS
TCAACTCCTACCATGGCACC+AGG 0.621665 2.3:+57881050 None:intergenic
GCTTATACGACCAAGGTAGG+AGG 0.628706 2.3:-57880208 MS.gene55918:CDS
GGCCGAGAGCTAACAATGGG+AGG 0.631197 2.3:-57880776 MS.gene55918:CDS
TATACGACCAAGGTAGGAGG+TGG 0.632143 2.3:-57880205 MS.gene55918:CDS
AGAACCGCTGGCTCCAAACA+CGG 0.634702 2.3:+57880920 None:intergenic
TGGCAGCAAGATAAATGGAG+TGG 0.637215 2.3:-57879727 MS.gene55918:CDS
AAATTGTCTAGTTGAACAAG+GGG 0.637347 2.3:+57880963 None:intergenic
AAAGCATTAAATACAACGTG+TGG 0.642188 2.3:-57880063 MS.gene55918:CDS
GGAGTTGATGGCTCATATGG+AGG 0.645378 2.3:-57881035 MS.gene55918:CDS
TGGTCCAGATGTCCAGTACA+CGG 0.651143 2.3:-57881233 MS.gene55918:intron
CTAGGACTAGGATCAAGTGA+TGG 0.656294 2.3:-57880310 MS.gene55918:CDS
GGTTCTGTAAGCAGAAGTGA+TGG 0.658111 2.3:-57880903 MS.gene55918:CDS
TAATAGCAGGGATACACAAG+AGG 0.658473 2.3:-57879611 MS.gene55918:intron
ACAATATTCAACTTTCGAGG+AGG 0.668248 2.3:+57878314 None:intergenic
CCGAGGCCATGGTATCAGAA+GGG 0.669836 2.3:-57880797 MS.gene55918:CDS
GAAGGGCCGAGAGCTAACAA+TGG 0.669968 2.3:-57880780 MS.gene55918:CDS
TGTTATAAAATCATACAGTG+AGG 0.670580 2.3:-57880098 MS.gene55918:CDS
TGTGAAAGCTTATACGACCA+AGG 0.670917 2.3:-57880215 MS.gene55918:CDS
GCTCTGATCAACAAATTCAG+GGG 0.687027 2.3:+57881448 None:intergenic
GTATTGGGTGATCAAAATCG+AGG 0.696890 2.3:-57880271 MS.gene55918:CDS
TACCGACCAATACAACAAGG+AGG 0.733388 2.3:-57880155 MS.gene55918:CDS
TTATACCGACCAATACAACA+AGG 0.761173 2.3:-57880158 MS.gene55918:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATGTGATTTTATTTTAT+AGG - chr2.3:57880254-57880273 MS.gene55918:CDS 10.0%
!!! AAATGTGATTTTATTTTATA+GGG - chr2.3:57880255-57880274 MS.gene55918:CDS 10.0%
!! ACAAAACTTTGAATATTTAT+AGG + chr2.3:57880100-57880119 None:intergenic 15.0%
!! ACAAAATTATGAATATTTAC+AGG - chr2.3:57880285-57880304 MS.gene55918:CDS 15.0%
!! ATTAATGATTTATTATTTGG+TGG - chr2.3:57878316-57878335 MS.gene55918:CDS 15.0%
!! CAAAACTTTGAATATTTATA+GGG + chr2.3:57880099-57880118 None:intergenic 15.0%
!! CAAAATTATGAATATTTACA+GGG - chr2.3:57880286-57880305 MS.gene55918:CDS 15.0%
!!! AATTTACCTTGTTAATATTT+TGG + chr2.3:57880330-57880349 None:intergenic 15.0%
!!! ATTTACCTTGTTAATATTTT+GGG + chr2.3:57880329-57880348 None:intergenic 15.0%
!!! TAATTTTATCATTTTGGTTT+AGG - chr2.3:57878084-57878103 MS.gene55918:CDS 15.0%
!!! TAGTAAATTTTGCTTATTAT+CGG - chr2.3:57881054-57881073 MS.gene55918:CDS 15.0%
!! AATCAGATGGAAAATATTAT+AGG - chr2.3:57880225-57880244 MS.gene55918:CDS 20.0%
!! ACAGAAAAAAATAGAAAGAT+AGG + chr2.3:57879677-57879696 None:intergenic 20.0%
!! ATCAGATGGAAAATATTATA+GGG - chr2.3:57880226-57880245 MS.gene55918:CDS 20.0%
!! ATTAACCCAAAATATTAACA+AGG - chr2.3:57880321-57880340 MS.gene55918:CDS 20.0%
!! TATGAATTTAACTAGATGTT+TGG - chr2.3:57880841-57880860 MS.gene55918:CDS 20.0%
!! TATTCAAATGTAATCCAAAA+AGG + chr2.3:57878965-57878984 None:intergenic 20.0%
!! TCAAGTAAATAAATTCATGT+CGG + chr2.3:57880965-57880984 None:intergenic 20.0%
!! TGAAATATAAGAACACATTA+GGG - chr2.3:57880056-57880075 MS.gene55918:CDS 20.0%
!! TTGAAATATAAGAACACATT+AGG - chr2.3:57880055-57880074 MS.gene55918:CDS 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + chr2.3:57880191-57880210 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr2.3:57880131-57880150 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr2.3:57880130-57880149 None:intergenic 20.0%
!!! ATTTATTATTTGGTGGATTT+AGG - chr2.3:57878323-57878342 MS.gene55918:CDS 20.0%
!!! ATTTTTTTCTGTAAGTTTGA+CGG - chr2.3:57879685-57879704 MS.gene55918:CDS 20.0%
!!! TGTGTGTAATTTTATCATTT+TGG - chr2.3:57878078-57878097 MS.gene55918:CDS 20.0%
!!! TTATTTTTGGAAACTACTTT+TGG + chr2.3:57881728-57881747 None:intergenic 20.0%
!!! TTTTGGATTTAGTTGATATT+AGG - chr2.3:57880892-57880911 MS.gene55918:CDS 20.0%
!!! TTTTGGGTTAATTAAGTAAA+TGG + chr2.3:57880313-57880332 None:intergenic 20.0%
! AAAATTGTCTAGTTGAACAA+GGG + chr2.3:57878671-57878690 None:intergenic 25.0%
! AATCCAACATTAAAACCAAA+AGG + chr2.3:57881013-57881032 None:intergenic 25.0%
! AATTATGGGTATTATTGTAC+AGG - chr2.3:57878226-57878245 MS.gene55918:CDS 25.0%
! ACCATTGATATATCAAAGTT+CGG + chr2.3:57877990-57878009 None:intergenic 25.0%
! AGAATTAACAGTTGGATTTA+TGG + chr2.3:57880575-57880594 None:intergenic 25.0%
! AGTAATGTATTAGTGATTGA+TGG - chr2.3:57879111-57879130 MS.gene55918:intron 25.0%
! ATGTTAAAATTAGTCGTTGT+AGG - chr2.3:57880622-57880641 MS.gene55918:intron 25.0%
! CCATAGTTGTAATATACATA+CGG + chr2.3:57878520-57878539 None:intergenic 25.0%
! GAATTAACAGTTGGATTTAT+GGG + chr2.3:57880574-57880593 None:intergenic 25.0%
! TATAATGATTGTGTGTATTG+AGG - chr2.3:57878037-57878056 MS.gene55918:CDS 25.0%
! TCCAAAATCAAGATTAAAGT+AGG + chr2.3:57880879-57880898 None:intergenic 25.0%
! TCTTTAACAGAATTAACAGT+TGG + chr2.3:57880583-57880602 None:intergenic 25.0%
! TGTACAATAATACCCATAAT+TGG + chr2.3:57878227-57878246 None:intergenic 25.0%
! TGTTATAAAATCATACAGTG+AGG - chr2.3:57879532-57879551 MS.gene55918:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr2.3:57880163-57880182 MS.gene55918:CDS 25.0%
!! ATGTTCCAAATCCAAATTTT+AGG - chr2.3:57879958-57879977 MS.gene55918:CDS 25.0%
!! ATTTAGTTGATATTAGGATC+TGG - chr2.3:57880898-57880917 MS.gene55918:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr2.3:57880164-57880183 MS.gene55918:CDS 25.0%
!! GATAATGTATTCTAAAGGAT+TGG - chr2.3:57881141-57881160 MS.gene55918:intron 25.0%
!!! ATTTATGGGCTTTAGATAAA+AGG + chr2.3:57880560-57880579 None:intergenic 25.0%
!!! TTACCTTTTGGTTTTAATGT+TGG - chr2.3:57881007-57881026 MS.gene55918:CDS 25.0%
AAATGCATTTGCAAGTTCTT+TGG - chr2.3:57878257-57878276 MS.gene55918:CDS 30.0%
AAATTGTCTAGTTGAACAAG+GGG + chr2.3:57878670-57878689 None:intergenic 30.0%
AATTGAATCATTGGAGAACT+CGG + chr2.3:57880725-57880744 None:intergenic 30.0%
ACAACAATATTCAACTTTCG+AGG + chr2.3:57881322-57881341 None:intergenic 30.0%
ACAATAATACCCATAATTGG+TGG + chr2.3:57878224-57878243 None:intergenic 30.0%
AGAATAAGACACTCAAGAAA+TGG + chr2.3:57880689-57880708 None:intergenic 30.0%
AGTATGATGTGCCTAAAATT+TGG + chr2.3:57879972-57879991 None:intergenic 30.0%
ATCTCCTCTATCTTAAAGAT+AGG - chr2.3:57881508-57881527 MS.gene55918:CDS 30.0%
ATGTGCCTAAAATTTGGATT+TGG + chr2.3:57879966-57879985 None:intergenic 30.0%
CCGTATGTATATTACAACTA+TGG - chr2.3:57878517-57878536 MS.gene55918:intron 30.0%
CTGTAGATACTATCTCTAAT+GGG - chr2.3:57879183-57879202 MS.gene55918:intron 30.0%
GAAAATTGTCTAGTTGAACA+AGG + chr2.3:57878672-57878691 None:intergenic 30.0%
GAATTTAACTAGATGTTTGG+TGG - chr2.3:57880844-57880863 MS.gene55918:CDS 30.0%
GCAAACAACCATATGTTAAT+TGG + chr2.3:57880759-57880778 None:intergenic 30.0%
TCAAATGTAATCCAAAAAGG+AGG + chr2.3:57878962-57878981 None:intergenic 30.0%
TCCGAACTTTGATATATCAA+TGG - chr2.3:57877986-57878005 MS.gene55918:CDS 30.0%
TCTCCAATGATTCAATTGAT+TGG - chr2.3:57880728-57880747 MS.gene55918:CDS 30.0%
TGGCAGATAATGTATTCTAA+AGG - chr2.3:57881136-57881155 MS.gene55918:CDS 30.0%
TTAACCTGCATAACAAAAAC+AGG + chr2.3:57879813-57879832 None:intergenic 30.0%
TTGCATTATCATAGTCAAGA+GGG + chr2.3:57879505-57879524 None:intergenic 30.0%
TTTGCATTATCATAGTCAAG+AGG + chr2.3:57879506-57879525 None:intergenic 30.0%
! AAAGCATTAAATACAACGTG+TGG - chr2.3:57879567-57879586 MS.gene55918:intron 30.0%
! AAAGCATTACAACCACAAAA+AGG - chr2.3:57881691-57881710 MS.gene55918:intron 30.0%
! AAAGTATCAGCTGAAAAATC+TGG - chr2.3:57879644-57879663 MS.gene55918:CDS 30.0%
! ATTTTGCTTATTATCGGTCA+TGG - chr2.3:57881060-57881079 MS.gene55918:CDS 30.0%
! GCCTACTTTAATCTTGATTT+TGG - chr2.3:57880875-57880894 MS.gene55918:CDS 30.0%
! GGTATAATTTTCCTCCTTTT+TGG - chr2.3:57878948-57878967 MS.gene55918:intron 30.0%
! GTGTTTTCTTCTTTATCTCA+GGG - chr2.3:57878475-57878494 MS.gene55918:CDS 30.0%
! TAAGAATGTCAAGTTGTTCT+CGG + chr2.3:57881588-57881607 None:intergenic 30.0%
! TACGGATTATATGGATTGTA+TGG + chr2.3:57878556-57878575 None:intergenic 30.0%
! TCTGGAGTAATGAATAATGA+AGG - chr2.3:57878157-57878176 MS.gene55918:CDS 30.0%
! TGTGTTTTCTTCTTTATCTC+AGG - chr2.3:57878474-57878493 MS.gene55918:CDS 30.0%
! TTAATAAGGACATGGACTTT+TGG - chr2.3:57879883-57879902 MS.gene55918:intron 30.0%
! TTTATGATATGCCACTTAAC+AGG + chr2.3:57879936-57879955 None:intergenic 30.0%
! TTTGTGGTTGTAATGCTTTT+GGG + chr2.3:57881690-57881709 None:intergenic 30.0%
! TTTTGTGGTTGTAATGCTTT+TGG + chr2.3:57881691-57881710 None:intergenic 30.0%
!! AAATGTTAGTGCTGATGTAT+TGG - chr2.3:57879343-57879362 MS.gene55918:intron 30.0%
!! AATGTTAGTGCTGATGTATT+GGG - chr2.3:57879344-57879363 MS.gene55918:intron 30.0%
!! ATAAGCAGGGTTTTGATAAT+TGG + chr2.3:57878644-57878663 None:intergenic 30.0%
!! ATTTGCAAGTTCTTTGGTTT+TGG - chr2.3:57878263-57878282 MS.gene55918:CDS 30.0%
!! GTTGATGGAAATTTTTGACA+GGG - chr2.3:57880196-57880215 MS.gene55918:CDS 30.0%
!! TAAGCAGGGTTTTGATAATT+GGG + chr2.3:57878643-57878662 None:intergenic 30.0%
!! TGAACCTATCTTTAAGATAG+AGG + chr2.3:57881515-57881534 None:intergenic 30.0%
!! TGTTGACTTTAATAAGGACA+TGG - chr2.3:57879875-57879894 MS.gene55918:intron 30.0%
!! TGTTGATGGAAATTTTTGAC+AGG - chr2.3:57880195-57880214 MS.gene55918:CDS 30.0%
!! TTAATGTCTGCTTTTCATAC+TGG - chr2.3:57879768-57879787 MS.gene55918:CDS 30.0%
!! TTTCTTTTGTAGGAGTGTAT+AGG - chr2.3:57879082-57879101 MS.gene55918:intron 30.0%
!! TTTTTGGAAACTACTTTTGG+CGG + chr2.3:57881725-57881744 None:intergenic 30.0%
!!! ATCATTTTGGTTTAGGTTGA+AGG - chr2.3:57878091-57878110 MS.gene55918:CDS 30.0%
!!! GACTTTTGAAACTTCTGATT+AGG + chr2.3:57881273-57881292 None:intergenic 30.0%
!!! TATAGGATTTTTGGTGTAGA+TGG - chr2.3:57878377-57878396 MS.gene55918:CDS 30.0%
!!! TCATTTTGGTTTAGGTTGAA+GGG - chr2.3:57878092-57878111 MS.gene55918:CDS 30.0%
AAACTGATCAACAGTTCACT+TGG + chr2.3:57880989-57881008 None:intergenic 35.0%
AAATTACCCAGTAAGCATTC+TGG + chr2.3:57877940-57877959 None:intergenic 35.0%
AACAAATCAAACAAGTTCCG+AGG - chr2.3:57878816-57878835 MS.gene55918:intron 35.0%
AACACATTAATATCAGCCAC+AGG + chr2.3:57878460-57878479 None:intergenic 35.0%
AACCTTAACCAAACACAAAC+AGG + chr2.3:57880785-57880804 None:intergenic 35.0%
ACAATATTCAACTTTCGAGG+AGG + chr2.3:57881319-57881338 None:intergenic 35.0%
ACTCCAGATTGTTCAAAGTT+TGG + chr2.3:57878145-57878164 None:intergenic 35.0%
AGTTCATGGAAACAAGAAGT+TGG - chr2.3:57879598-57879617 MS.gene55918:intron 35.0%
ATGCTCTGATCAACAAATTC+AGG + chr2.3:57878187-57878206 None:intergenic 35.0%
CAAAAGTTCAATGAAGCTTC+TGG - chr2.3:57878763-57878782 MS.gene55918:intron 35.0%
CAACTTGACATTCTTACAGT+AGG - chr2.3:57881592-57881611 MS.gene55918:intron 35.0%
CAGCCAATCAATTGAATCAT+TGG + chr2.3:57880734-57880753 None:intergenic 35.0%
CAGTGCCAGTTAAAGTTAAT+GGG - chr2.3:57881617-57881636 MS.gene55918:intron 35.0%
CATTCACAGACTTGATGTTT+GGG + chr2.3:57881456-57881475 None:intergenic 35.0%
CCATATAATCCGTATATACC+TGG - chr2.3:57878562-57878581 MS.gene55918:intron 35.0%
CCATTAGAGATAGTATCTAC+AGG + chr2.3:57879185-57879204 None:intergenic 35.0%
CCTGTAGATACTATCTCTAA+TGG - chr2.3:57879182-57879201 MS.gene55918:intron 35.0%
CTACACCAAAAATCCTATAC+TGG + chr2.3:57878376-57878395 None:intergenic 35.0%
CTCCAGATTGTTCAAAGTTT+GGG + chr2.3:57878144-57878163 None:intergenic 35.0%
GAATTCTTCTCATACTTGCT+GGG + chr2.3:57881355-57881374 None:intergenic 35.0%
GCAAGTATGAGAAGAATTCA+AGG - chr2.3:57881356-57881375 MS.gene55918:intron 35.0%
GCTAACCCATTAACTTTAAC+TGG + chr2.3:57881625-57881644 None:intergenic 35.0%
GTTCATGGAAACAAGAAGTT+GGG - chr2.3:57879599-57879618 MS.gene55918:intron 35.0%
GTTCTGCTCAGAATTTGAAA+TGG + chr2.3:57881416-57881435 None:intergenic 35.0%
TCAGTGCCAGTTAAAGTTAA+TGG - chr2.3:57881616-57881635 MS.gene55918:intron 35.0%
TCATTCACAGACTTGATGTT+TGG + chr2.3:57881457-57881476 None:intergenic 35.0%
TGAATTCTTCTCATACTTGC+TGG + chr2.3:57881356-57881375 None:intergenic 35.0%
TGCTCTGATCAACAAATTCA+GGG + chr2.3:57878186-57878205 None:intergenic 35.0%
TGCTTAAGGAAAATGTCACA+AGG + chr2.3:57880159-57880178 None:intergenic 35.0%
TGGCTGAACCAATTAACATA+TGG - chr2.3:57880748-57880767 MS.gene55918:CDS 35.0%
TTAGGGACCAAAAATGTTGA+TGG - chr2.3:57880181-57880200 MS.gene55918:CDS 35.0%
TTATACCGACCAATACAACA+AGG - chr2.3:57879472-57879491 MS.gene55918:intron 35.0%
TTGACACATGCAAATGTTTC+TGG - chr2.3:57878886-57878905 MS.gene55918:intron 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr2.3:57880173-57880192 None:intergenic 35.0%
! AAGCTTCTGGTAACTTTTCT+AGG - chr2.3:57878776-57878795 MS.gene55918:intron 35.0%
! ACTTTTGGCAGCAAGATAAA+TGG - chr2.3:57879898-57879917 MS.gene55918:intron 35.0%
! CCAGGTATATACGGATTATA+TGG + chr2.3:57878565-57878584 None:intergenic 35.0%
! CTGTTGATCAGTTTACCTTT+TGG - chr2.3:57880995-57881014 MS.gene55918:CDS 35.0%
! GATTTTGCAGCAAATGCTAA+TGG - chr2.3:57879263-57879282 MS.gene55918:intron 35.0%
! TAGATGTTTGGTGGTTTACT+AGG - chr2.3:57880853-57880872 MS.gene55918:CDS 35.0%
! TTTTCTTCTTTATCTCAGGG+TGG - chr2.3:57878478-57878497 MS.gene55918:CDS 35.0%
!! AAGCAGGGTTTTGATAATTG+GGG + chr2.3:57878642-57878661 None:intergenic 35.0%
!! GTTAAAGTTAATGGGTTAGC+TGG - chr2.3:57881625-57881644 MS.gene55918:intron 35.0%
!! GTTTTGATCTACTAGTCCTA+GGG + chr2.3:57879385-57879404 None:intergenic 35.0%
!! TGGCTCTGTTGACTTTAATA+AGG - chr2.3:57879869-57879888 MS.gene55918:intron 35.0%
!!! CATTTTGGTTTAGGTTGAAG+GGG - chr2.3:57878093-57878112 MS.gene55918:CDS 35.0%
!!! GATAGCTGTGTTTTGAAAAC+TGG + chr2.3:57880481-57880500 None:intergenic 35.0%
!!! GTGAACGCTATTTCTTTTGT+AGG - chr2.3:57879072-57879091 MS.gene55918:intron 35.0%
!!! TCATCCTGTTTTTGTTATGC+AGG - chr2.3:57879806-57879825 MS.gene55918:intron 35.0%
!!! TGTTTTGATCTACTAGTCCT+AGG + chr2.3:57879386-57879405 None:intergenic 35.0%
AAAGCTTATACGACCAAGGT+AGG - chr2.3:57879419-57879438 MS.gene55918:intron 40.0%
AATCAGACTGCAGTACTATC+GGG - chr2.3:57880403-57880422 MS.gene55918:CDS 40.0%
ACAAGCCAGTAACTAATAGC+AGG - chr2.3:57880006-57880025 MS.gene55918:CDS 40.0%
AGCCCAAACTTTGAACAATC+TGG - chr2.3:57878139-57878158 MS.gene55918:CDS 40.0%
AGTCTTCAGTTGCTAAGCTT+AGG - chr2.3:57879288-57879307 MS.gene55918:intron 40.0%
ATAGTAGCTTCTTCACGAAG+TGG - chr2.3:57879233-57879252 MS.gene55918:intron 40.0%
ATCACTTGATCCTAGTCCTA+GGG + chr2.3:57879321-57879340 None:intergenic 40.0%
CAAGCCAGTAACTAATAGCA+GGG - chr2.3:57880007-57880026 MS.gene55918:CDS 40.0%
CAATCAGACTGCAGTACTAT+CGG - chr2.3:57880402-57880421 MS.gene55918:CDS 40.0%
CGTATGATGTTTCTCAAGCT+AGG - chr2.3:57877912-57877931 MS.gene55918:CDS 40.0%
GAAACTTCTGATTAGGAGCT+TGG + chr2.3:57881266-57881285 None:intergenic 40.0%
GAAGTTGGGAAATGCTTATG+AGG - chr2.3:57879613-57879632 MS.gene55918:CDS 40.0%
GACAGGGACTAAAAATCAGA+TGG - chr2.3:57880212-57880231 MS.gene55918:CDS 40.0%
GCTCTGATCAACAAATTCAG+GGG + chr2.3:57878185-57878204 None:intergenic 40.0%
GTATCCCTGCTATTAGTTAC+TGG + chr2.3:57880014-57880033 None:intergenic 40.0%
GTATTGAATGTTCTTGCTCG+TGG - chr2.3:57881116-57881135 MS.gene55918:CDS 40.0%
GTATTGGGTGATCAAAATCG+AGG - chr2.3:57879359-57879378 MS.gene55918:intron 40.0%
GTTATGCAGGTTAATGCTAG+CGG - chr2.3:57879819-57879838 MS.gene55918:intron 40.0%
TAATAGCAGGGATACACAAG+AGG - chr2.3:57880019-57880038 MS.gene55918:CDS 40.0%
TAGGAACCAGAATGCTTACT+GGG - chr2.3:57877931-57877950 MS.gene55918:CDS 40.0%
TCCAGTATTCATACCAGCAT+TGG - chr2.3:57881291-57881310 MS.gene55918:intron 40.0%
TCTTCTGGGTTCTTGAAAGT+TGG - chr2.3:57881649-57881668 MS.gene55918:intron 40.0%
TGAGAAGAATTCAAGGCTCA+AGG - chr2.3:57881363-57881382 MS.gene55918:intron 40.0%
TGCCTGTTTGTGTTTGGTTA+AGG - chr2.3:57880780-57880799 MS.gene55918:CDS 40.0%
TGTGAAAGCTTATACGACCA+AGG - chr2.3:57879415-57879434 MS.gene55918:intron 40.0%
TTTGCTTGCCTGTTTGTGTT+TGG - chr2.3:57880774-57880793 MS.gene55918:CDS 40.0%
! AATGCTAGCGGTCAATTTTG+TGG - chr2.3:57879831-57879850 MS.gene55918:intron 40.0%
! ATCCTCCTTGTTGTATTGGT+CGG + chr2.3:57879480-57879499 None:intergenic 40.0%
! GAGGACCAGTATAGGATTTT+TGG - chr2.3:57878368-57878387 MS.gene55918:CDS 40.0%
! GATCGTGCATGATCTTTTGA+CGG + chr2.3:57881237-57881256 None:intergenic 40.0%
! GATTTAGGATTCGAATCACC+CGG - chr2.3:57878338-57878357 MS.gene55918:CDS 40.0%
! GGAAATCCTCCTTGTTGTAT+TGG + chr2.3:57879484-57879503 None:intergenic 40.0%
! GTATCTCTCTGTCCAGTTTT+GGG - chr2.3:57878434-57878453 MS.gene55918:CDS 40.0%
! GTTATGCTGTTCTGTTTTGC+AGG - chr2.3:57879133-57879152 MS.gene55918:intron 40.0%
! TGTATCTCTCTGTCCAGTTT+TGG - chr2.3:57878433-57878452 MS.gene55918:CDS 40.0%
! TGTTTGGGACATCAGAATTG+TGG + chr2.3:57881441-57881460 None:intergenic 40.0%
!! AGGGTTTTGATAATTGGGGA+GGG + chr2.3:57878638-57878657 None:intergenic 40.0%
!! ATGCAAATGTTTCTGGAAGC+AGG - chr2.3:57878893-57878912 MS.gene55918:intron 40.0%
!!! GTTTTGAAAACTGGTCCAGA+AGG + chr2.3:57880472-57880491 None:intergenic 40.0%
!!! TCTTTGGTTTTGGTGGTAAC+TGG - chr2.3:57878273-57878292 MS.gene55918:CDS 40.0%
!!! TGCAAGTTCTTTGGTTTTGG+TGG - chr2.3:57878266-57878285 MS.gene55918:CDS 40.0%
ACCATGGCACCAGGTATATA+CGG + chr2.3:57878574-57878593 None:intergenic 45.0%
ACCCATAATTGGTGGAAGCA+GGG + chr2.3:57878216-57878235 None:intergenic 45.0%
ACCCTGCTTCCACCAATTAT+GGG - chr2.3:57878212-57878231 MS.gene55918:CDS 45.0%
ACGGAGTTTGCAGAACTATC+AGG + chr2.3:57878694-57878713 None:intergenic 45.0%
AGCATCATCTGCTGTTCATC+AGG - chr2.3:57878927-57878946 MS.gene55918:intron 45.0%
AGTTCTGCAAACTCCGTGTT+TGG - chr2.3:57878697-57878716 MS.gene55918:intron 45.0%
AGTTGCTAAGCTTAGGCCAA+AGG - chr2.3:57879295-57879314 MS.gene55918:intron 45.0%
ATTCGAATCACCCGGTGAAT+GGG - chr2.3:57878346-57878365 MS.gene55918:CDS 45.0%
CAGGTTGCAGCAAAACAATC+TGG - chr2.3:57881553-57881572 MS.gene55918:intron 45.0%
CATCAAGTCTGTGAATGAGC+AGG - chr2.3:57881459-57881478 MS.gene55918:CDS 45.0%
CATCACTTGATCCTAGTCCT+AGG + chr2.3:57879322-57879341 None:intergenic 45.0%
CTAGGAACCAGAATGCTTAC+TGG - chr2.3:57877930-57877949 MS.gene55918:CDS 45.0%
CTAGGACTAGGATCAAGTGA+TGG - chr2.3:57879320-57879339 MS.gene55918:intron 45.0%
GAACAAGGGGATCATAAGCA+GGG + chr2.3:57878657-57878676 None:intergenic 45.0%
GCAGCAAAACAATCTGGCAT+TGG - chr2.3:57881559-57881578 MS.gene55918:intron 45.0%
GCCAATGCTGGTATGAATAC+TGG + chr2.3:57881295-57881314 None:intergenic 45.0%
GGTTCTGTAAGCAGAAGTGA+TGG - chr2.3:57878727-57878746 MS.gene55918:intron 45.0%
GTACTGCAGTCTGATTGAAC+TGG + chr2.3:57880399-57880418 None:intergenic 45.0%
GTGGAAGCTTTCCTGTTAAG+TGG - chr2.3:57879922-57879941 MS.gene55918:intron 45.0%
GTGTGGTCTTCTACAGTTCA+TGG - chr2.3:57879584-57879603 MS.gene55918:intron 45.0%
TACCCATAATTGGTGGAAGC+AGG + chr2.3:57878217-57878236 None:intergenic 45.0%
TACCCTGCTTCCACCAATTA+TGG - chr2.3:57878211-57878230 MS.gene55918:CDS 45.0%
TACCGACCAATACAACAAGG+AGG - chr2.3:57879475-57879494 MS.gene55918:intron 45.0%
TGAACAAGGGGATCATAAGC+AGG + chr2.3:57878658-57878677 None:intergenic 45.0%
TGGCAGCAAGATAAATGGAG+TGG - chr2.3:57879903-57879922 MS.gene55918:intron 45.0%
TGTGGAGTTGCAGAGATGAT+TGG - chr2.3:57879849-57879868 MS.gene55918:intron 45.0%
! AACAGCTGACTCTCAATCAG+CGG + chr2.3:57879011-57879030 None:intergenic 45.0%
! GATCTGGTTGTTGTTGCCAT+GGG - chr2.3:57880914-57880933 MS.gene55918:CDS 45.0%
! GTAAGCAGAAGTGATGGAAG+AGG - chr2.3:57878733-57878752 MS.gene55918:intron 45.0%
! TGTTTTGCTGCAACCTGCTT+CGG + chr2.3:57881550-57881569 None:intergenic 45.0%
! TTCCTCCCATTGTTAGCTCT+CGG + chr2.3:57878859-57878878 None:intergenic 45.0%
! TTCTTCTCATACTTGCTGGG+TGG + chr2.3:57881352-57881371 None:intergenic 45.0%
!! CAGGGTTTTGATAATTGGGG+AGG + chr2.3:57878639-57878658 None:intergenic 45.0%
!! GTAGGAGTTGATGGCTCATA+TGG - chr2.3:57878592-57878611 MS.gene55918:intron 45.0%
!! TATATACCTGGTGCCATGGT+AGG - chr2.3:57878574-57878593 MS.gene55918:intron 45.0%
!! ATAAAAAAATAATATAATCA+TGG + chr2.3:57880534-57880553 None:intergenic 5.0%
!! TATATTAATGATTTATTATT+TGG - chr2.3:57878313-57878332 MS.gene55918:CDS 5.0%
AAACCAACCGGTGAATTGGC+TGG - chr2.3:57880429-57880448 MS.gene55918:CDS 50.0%
AAGGGCCGAGAGCTAACAAT+GGG - chr2.3:57878851-57878870 MS.gene55918:intron 50.0%
AATCAGCGGCTGAAGTAGTC+GGG + chr2.3:57878997-57879016 None:intergenic 50.0%
AATCGCCATTAACCCGAAGC+AGG - chr2.3:57881534-57881553 MS.gene55918:intron 50.0%
ACTATCGGGCTCAAACCAAC+CGG - chr2.3:57880417-57880436 MS.gene55918:CDS 50.0%
ACTTCTGCTTACAGAACCGC+TGG + chr2.3:57878725-57878744 None:intergenic 50.0%
ATACTGGTCCTCCCATTCAC+CGG + chr2.3:57878360-57878379 None:intergenic 50.0%
ATGATGCACTGCTACACCCA+TGG + chr2.3:57880933-57880952 None:intergenic 50.0%
CAATCAGCGGCTGAAGTAGT+CGG + chr2.3:57878998-57879017 None:intergenic 50.0%
GATTCGAATCACCCGGTGAA+TGG - chr2.3:57878345-57878364 MS.gene55918:CDS 50.0%
GCTCAAACCAACCGGTGAAT+TGG - chr2.3:57880425-57880444 MS.gene55918:CDS 50.0%
GCTTATACGACCAAGGTAGG+AGG - chr2.3:57879422-57879441 MS.gene55918:intron 50.0%
GTGAATGGGAGGACCAGTAT+AGG - chr2.3:57878360-57878379 MS.gene55918:CDS 50.0%
GTGATCAAAATCGAGGCCCT+AGG - chr2.3:57879366-57879385 MS.gene55918:intron 50.0%
TAGTCAGACTCACCGTGTAC+TGG + chr2.3:57878412-57878431 None:intergenic 50.0%
TATACGACCAAGGTAGGAGG+TGG - chr2.3:57879425-57879444 MS.gene55918:intron 50.0%
TCAAACAAGTTCCGAGGCCA+TGG - chr2.3:57878822-57878841 MS.gene55918:intron 50.0%
TCCAGAAGGACCAGTTGAAC+CGG + chr2.3:57880458-57880477 None:intergenic 50.0%
TGAGCCATCAACTCCTACCA+TGG + chr2.3:57878590-57878609 None:intergenic 50.0%
TGGTCCAGATGTCCAGTACA+CGG - chr2.3:57878397-57878416 MS.gene55918:CDS 50.0%
! GGATCTGGTTGTTGTTGCCA+TGG - chr2.3:57880913-57880932 MS.gene55918:CDS 50.0%
! GTTTTGCTGCAACCTGCTTC+GGG + chr2.3:57881549-57881568 None:intergenic 50.0%
! TCCGTATATACCTGGTGCCA+TGG - chr2.3:57878570-57878589 MS.gene55918:intron 50.0%
! TGCAACCTGCTTCGGGTTAA+TGG + chr2.3:57881542-57881561 None:intergenic 50.0%
!! AATGGGTTAGCTGGCTCTTC+TGG - chr2.3:57881634-57881653 MS.gene55918:intron 50.0%
!! ATGGGTTAGCTGGCTCTTCT+GGG - chr2.3:57881635-57881654 MS.gene55918:intron 50.0%
!! GGAGTTGATGGCTCATATGG+AGG - chr2.3:57878595-57878614 MS.gene55918:intron 50.0%
!! GTTGATGGCTCATATGGAGG+AGG - chr2.3:57878598-57878617 MS.gene55918:intron 50.0%
AAGCTTAGGCCAAAGGCCCT+AGG - chr2.3:57879302-57879321 MS.gene55918:intron 55.0%
ATCAGCCACAGGCCCAAAAC+TGG + chr2.3:57878449-57878468 None:intergenic 55.0%
CCAGAAGGACCAGTTGAACC+GGG + chr2.3:57880457-57880476 None:intergenic 55.0%
CCCTTCTGATACCATGGCCT+CGG + chr2.3:57878836-57878855 None:intergenic 55.0%
CCGAGGCCATGGTATCAGAA+GGG - chr2.3:57878833-57878852 MS.gene55918:intron 55.0%
CTCACCGTGTACTGGACATC+TGG + chr2.3:57878404-57878423 None:intergenic 55.0%
CTCGTTACCACCTCCTACCT+TGG + chr2.3:57879435-57879454 None:intergenic 55.0%
GAACCAGCCAATTCACCGGT+TGG + chr2.3:57880435-57880454 None:intergenic 55.0%
GAAGGGCCGAGAGCTAACAA+TGG - chr2.3:57878850-57878869 MS.gene55918:intron 55.0%
GATCCTAGTCCTAGGGCCTT+TGG + chr2.3:57879314-57879333 None:intergenic 55.0%
TACTGGTCCTCCCATTCACC+GGG + chr2.3:57878359-57878378 None:intergenic 55.0%
TCAACTCCTACCATGGCACC+AGG + chr2.3:57878583-57878602 None:intergenic 55.0%
TCCGAGGCCATGGTATCAGA+AGG - chr2.3:57878832-57878851 MS.gene55918:intron 55.0%
TCTCGGCCCTTCTGATACCA+TGG + chr2.3:57878842-57878861 None:intergenic 55.0%
! AACTCCGTGTTTGGAGCCAG+CGG - chr2.3:57878706-57878725 MS.gene55918:intron 55.0%
! GCGGCAGCATCTCCTTTTTG+TGG + chr2.3:57881706-57881725 None:intergenic 55.0%
! GGTGCCATGGTAGGAGTTGA+TGG - chr2.3:57878583-57878602 MS.gene55918:intron 55.0%
!! AGAACCGCTGGCTCCAAACA+CGG + chr2.3:57878713-57878732 None:intergenic 55.0%
!! TTTCGAGGAGGTGCCAATGC+TGG + chr2.3:57881307-57881326 None:intergenic 55.0%
!!! TCTGTCCAGTTTTGGGCCTG+TGG - chr2.3:57878441-57878460 MS.gene55918:CDS 55.0%
AGGCCAAAGGCCCTAGGACT+AGG - chr2.3:57879308-57879327 MS.gene55918:intron 60.0%
CCCGGTTCAACTGGTCCTTC+TGG - chr2.3:57880454-57880473 MS.gene55918:CDS 60.0%
CCGGGAACCAGCCAATTCAC+CGG + chr2.3:57880439-57880458 None:intergenic 60.0%
CGAATCACCCGGTGAATGGG+AGG - chr2.3:57878349-57878368 MS.gene55918:CDS 60.0%
GGCCGAGAGCTAACAATGGG+AGG - chr2.3:57878854-57878873 MS.gene55918:intron 60.0%
! CCGGTGAATTGGCTGGTTCC+CGG - chr2.3:57880436-57880455 MS.gene55918:CDS 60.0%
! TGGCTGGTTCCCGGTTCAAC+TGG - chr2.3:57880445-57880464 MS.gene55918:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 57877905 57881747 57877905 ID=MS.gene55918
chr2.3 mRNA 57877905 57881747 57877905 ID=MS.gene55918.t1;Parent=MS.gene55918
chr2.3 exon 57881700 57881747 57881700 ID=MS.gene55918.t1.exon1;Parent=MS.gene55918.t1
chr2.3 CDS 57881700 57881747 57881700 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
chr2.3 exon 57881405 57881546 57881405 ID=MS.gene55918.t1.exon2;Parent=MS.gene55918.t1
chr2.3 CDS 57881405 57881546 57881405 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
chr2.3 exon 57881234 57881307 57881234 ID=MS.gene55918.t1.exon3;Parent=MS.gene55918.t1
chr2.3 CDS 57881234 57881307 57881234 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
chr2.3 exon 57880704 57881156 57880704 ID=MS.gene55918.t1.exon4;Parent=MS.gene55918.t1
chr2.3 CDS 57880704 57881156 57880704 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
chr2.3 exon 57879958 57880497 57879958 ID=MS.gene55918.t1.exon5;Parent=MS.gene55918.t1
chr2.3 CDS 57879958 57880497 57879958 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
chr2.3 exon 57879612 57879824 57879612 ID=MS.gene55918.t1.exon6;Parent=MS.gene55918.t1
chr2.3 CDS 57879612 57879824 57879612 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
chr2.3 exon 57877905 57878510 57877905 ID=MS.gene55918.t1.exon7;Parent=MS.gene55918.t1
chr2.3 CDS 57877905 57878510 57877905 ID=cds.MS.gene55918.t1;Parent=MS.gene55918.t1
Gene Sequence

>MS.gene55918

ATGGAAACGTATGATGTTTCTCAAGCTAGGAACCAGAATGCTTACTGGGTAATTTTTAATAAATTTTGTAATTTCTTGACTTCCGAACTTTGATATATCAATGGTTGTTTAATGATTTGATTTTCTTTTTAATATAATGATTGTGTGTATTGAGGTTGTATGATAGTCGATAATGTGTGTAATTTTATCATTTTGGTTTAGGTTGAAGGGGCTGATATAAATTCACAGTTCACAAGCCCAAACTTTGAACAATCTGGAGTAATGAATAATGAAGGAGCCCCTGAATTTGTTGATCAGAGCATGTATTACCCTGCTTCCACCAATTATGGGTATTATTGTACAGGTAAATTTAAAATGCATTTGCAAGTTCTTTGGTTTTGGTGGTAACTGGTATTTTATGCATCATATTATATTAATGATTTATTATTTGGTGGATTTAGGATTCGAATCACCCGGTGAATGGGAGGACCAGTATAGGATTTTTGGTGTAGATGGTCCAGATGTCCAGTACACGGTGAGTCTGACTACTGTATCTCTCTGTCCAGTTTTGGGCCTGTGGCTGATATTAATGTGTTTTCTTCTTTATCTCAGGGTGGACAAGATGAAAGTTTTCCGTATGTATATTACAACTATGGATATGCACAGTCTCCATACAATCCATATAATCCGTATATACCTGGTGCCATGGTAGGAGTTGATGGCTCATATGGAGGAGGACAATCTTATTACACCCTCCCCAATTATCAAAACCCTGCTTATGATCCCCTTGTTCAACTAGACAATTTTCCTGATAGTTCTGCAAACTCCGTGTTTGGAGCCAGCGGTTCTGTAAGCAGAAGTGATGGAAGAGGTTTGAAACAAAAGTTCAATGAAGCTTCTGGTAACTTTTCTAGGAACTCTTTAAAACTTTCAACAAATCAAACAAGTTCCGAGGCCATGGTATCAGAAGGGCCGAGAGCTAACAATGGGAGGAAGCAAGATTTGACACATGCAAATGTTTCTGGAAGCAGGTCTCTCAACGCAGCATCATCTGCTGTTCATCAGGTATAATTTTCCTCCTTTTTGGATTACATTTGAATATAATTTTGTCCCGACTACTTCAGCCGCTGATTGAGAGTCAGCTGTTCTATGACTACGAGTGACGTTAGTTGCTACTATTACGATGTTGTGAACGCTATTTCTTTTGTAGGAGTGTATAGGTAGATCAGTAATGTATTAGTGATTGATGGTTATGCTGTTCTGTTTTGCAGGATAGAAGAATTGATGCTTCAGTGCAACCTGTAGATACTATCTCTAATGGGAATGTTATTTCTCATCGTAATCAATTGATAGTAGCTTCTTCACGAAGTGGATTTTCTGATTTTGCAGCAAATGCTAATGGACAGTCTTCAGTTGCTAAGCTTAGGCCAAAGGCCCTAGGACTAGGATCAAGTGATGGAAATGTTAGTGCTGATGTATTGGGTGATCAAAATCGAGGCCCTAGGACTAGTAGATCAAAACATCAACTGTCTGTGAAAGCTTATACGACCAAGGTAGGAGGTGGTAACGAGCAAGACAACATCATCATTTATACCGACCAATACAACAAGGAGGATTTCCCTCTTGACTATGATAATGCAAAGTTTTTTGTTATAAAATCATACAGTGAGGATGATGTGCACAAAAGCATTAAATACAACGTGTGGTCTTCTACAGTTCATGGAAACAAGAAGTTGGGAAATGCTTATGAGGATACAAAGAAAGTATCAGCTGAAAAATCTGGAGTCTGTCCTATCTTTCTATTTTTTTCTGTAAGTTTGACGGTGTCTTAACTGAGATTTTTTTATGTTTTCTTTGTGTATCTAATATCTATTTGTAAGCTAATTAATGTCTGCTTTTCATACTGGATTTAATAATATTCTTCATCCTGTTTTTGTTATGCAGGTTAATGCTAGCGGTCAATTTTGTGGAGTTGCAGAGATGATTGGCTCTGTTGACTTTAATAAGGACATGGACTTTTGGCAGCAAGATAAATGGAGTGGAAGCTTTCCTGTTAAGTGGCATATCATAAAAGATGTTCCAAATCCAAATTTTAGGCACATCATACTAGAGAACAATGAAAACAAGCCAGTAACTAATAGCAGGGATACACAAGAGGTATTCATTATTTGTTGAAATATAAGAACACATTAGGGTTAATTAAGTTTTTAGTCCCTATAAATATTCAAAGTTTTGTTTTTAGTCCCTACAAAATAAAATCACACTTTTTAGTCCTTGTGACATTTTCCTTAAGCATTTTAGGGACCAAAAATGTTGATGGAAATTTTTGACAGGGACTAAAAATCAGATGGAAAATATTATAGGGATTAAAAAATGTGATTTTATTTTATAGGGACTAAAAACAAAATTATGAATATTTACAGGGACCATTTACTTAATTAACCCAAAATATTAACAAGGTAAATTAGTAAAATCTAAAAATAGAAATCAGTTGTAGCAACTGTGATTCAATCCAGTTCAATCAGACTGCAGTACTATCGGGCTCAAACCAACCGGTGAATTGGCTGGTTCCCGGTTCAACTGGTCCTTCTGGACCAGTTTTCAAAACACAGCTATCAAGTTTATTATCAATATCAATCATGTTACGCCATGATTATATTATTTTTTTATTTTCCTTTTATCTAAAGCCCATAAATCCAACTGTTAATTCTGTTAAAGAGTTCTTTTATGAGATTTATATGTTAAAATTAGTCGTTGTAGGTAAAGTTTTTGCACTGAATTTGTTTGCTAAAATGATTATTTCCATTTCTTGAGTGTCTTATTCTGTTATATCAATTGCCGAGTTCTCCAATGATTCAATTGATTGGCTGAACCAATTAACATATGGTTGTTTGCTTGCCTGTTTGTGTTTGGTTAAGGTTTTAGCAGAGCTAATATGCTTGAAGAGAAAGCAATTGTATGAATTTAACTAGATGTTTGGTGGTTTACTAGGCCTACTTTAATCTTGATTTTGGATTTAGTTGATATTAGGATCTGGTTGTTGTTGCCATGGGTGTAGCAGTGCATCATAAATGATTACCGACATGAATTTATTTACTTGAACCAAGTGAACTGTTGATCAGTTTACCTTTTGGTTTTAATGTTGGATTAAACTAGTTGTTGTTTGTCTCTAGTAAATTTTGCTTATTATCGGTCATGGCTTTTTTTTTCTCTACTTGATTTAGAATATCGCGTATTGAATGTTCTTGCTCGTGGCAGATAATGTATTCTAAAGGATTGGAAATGCTGAAAATATTCAAAAATCATACTTTGAAGACATCGTTGCTTGATGACTTCATGTATTATGAAAACCGTCAAAAGATCATGCACGATCAGAAAGCCAAGCTCCTAATCAGAAGTTTCAAAAGTCCAGTATTCATACCAGCATTGGCACCTCCTCGAAAGTTGAATATTGTTGTTGACAAACCACCCAGCAAGTATGAGAAGAATTCAAGGCTCAAGGATGATTCTAATAGCTTAAATCAGATGTCCATTTCAAATTCTGAGCAGAACATCCACAATTCTGATGTCCCAAACATCAAGTCTGTGAATGAGCAGGCTGAGAAAATTGCAGTTAAAGAAGATATCTCCTCTATCTTAAAGATAGGTTCAATCGCCATTAACCCGAAGCAGGTTGCAGCAAAACAATCTGGCATTGGTAGCCGAGAACAACTTGACATTCTTACAGTAGGCTCAGTGCCAGTTAAAGTTAATGGGTTAGCTGGCTCTTCTGGGTTCTTGAAAGTTGGCAGTATACAACTTGACCCAAAAGCATTACAACCACAAAAAGGAGATGCTGCCGCCAAAAGTAGTTTCCAAAAATAA
Protein sequence

>MS.gene55918.t1

METYDVSQARNQNAYWVEGADINSQFTSPNFEQSGVMNNEGAPEFVDQSMYYPASTNYGYYCTGFESPGEWEDQYRIFGVDGPDVQYTGGQDESFPYVYYNYGYAQSPYNPYNPYIPGAMVGVDGSYGGGQSYYTLPNYQNPAYDPLVQLDNFPDSSANSVFGASGSVSRSDGRGLKQKFNEASGNFSRNSLKLSTNQTSSEAMVSEGPRANNGRKQDLTHANVSGSRSLNAASSAVHQDRRIDASVQPVDTISNGNVISHRNQLIVASSRSGFSDFAANANGQSSVAKLRPKALGLGSSDGNVSADVLGDQNRGPRTSRSKHQLSVKAYTTKVGGGNEQDNIIIYTDQYNKEDFPLDYDNAKFFVIKSYSEDDVHKSIKYNVWSSTVHGNKKLGNAYEDTKKVSAEKSGVCPIFLFFSVNASGQFCGVAEMIGSVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNPNFRHIILENNENKPVTNSRDTQEIMYSKGLEMLKIFKNHTLKTSLLDDFMYYENRQKIMHDQKAKLLIRSFKSPVFIPALAPPRKLNIVVDKPPSKYEKNSRLKDDSNSLNQMSISNSEQNIHNSDVPNIKSVNEQAEKIAVKEDISSILKIGSIAINPKQVAAKQSGIGSREQLDILTVGSVPVKVNGLAGSSGFLKVGSIQLDPKALQPQKGDAAAKSSFQK