Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61469.t1 | PNY12257.1 | 45.7 | 464 | 211 | 7 | 1 | 439 | 1 | 448 | 6.80E-98 | 367.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61469.t1 | Q8H1R7 | 26.4 | 444 | 257 | 15 | 17 | 428 | 2 | 407 | 2.5e-24 | 114.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61469.t1 | A0A2K3PAF9 | 45.7 | 464 | 211 | 7 | 1 | 439 | 1 | 448 | 4.9e-98 | 367.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047137 | MS.gene61469 | PPI |
MS.gene61469 | MS.gene51793 | PPI |
MS.gene61469 | MS.gene033694 | PPI |
MS.gene61469 | MS.gene01653 | PPI |
MS.gene61469 | MS.gene54960 | PPI |
MS.gene61469 | MS.gene024262 | PPI |
MS.gene61469 | MS.gene072003 | PPI |
MS.gene61469 | MS.gene045772 | PPI |
MS.gene61469 | MS.gene065373 | PPI |
MS.gene61469 | MS.gene51795 | PPI |
MS.gene61469 | MS.gene002112 | PPI |
MS.gene61469 | MS.gene047136 | PPI |
MS.gene61469 | MS.gene072000 | PPI |
MS.gene61469 | MS.gene033695 | PPI |
MS.gene61469 | MS.gene54959 | PPI |
MS.gene61469 | MS.gene071257 | PPI |
MS.gene61469 | MS.gene78164 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61469.t1 | MTR_8g014260 | 46.383 | 470 | 202 | 12 | 1 | 439 | 1 | 451 | 2.14e-116 | 348 |
MS.gene61469.t1 | MTR_8g014160 | 44.592 | 453 | 163 | 11 | 12 | 439 | 36 | 425 | 1.13e-100 | 307 |
MS.gene61469.t1 | MTR_8g445780 | 45.714 | 420 | 172 | 10 | 1 | 394 | 1 | 390 | 2.40e-99 | 302 |
MS.gene61469.t1 | MTR_8g077460 | 40.363 | 441 | 195 | 12 | 1 | 439 | 1 | 375 | 5.14e-88 | 273 |
MS.gene61469.t1 | MTR_2g083840 | 41.950 | 441 | 208 | 13 | 7 | 418 | 11 | 432 | 7.43e-84 | 265 |
MS.gene61469.t1 | MTR_8g062270 | 41.920 | 427 | 199 | 14 | 17 | 410 | 16 | 426 | 1.30e-82 | 261 |
MS.gene61469.t1 | MTR_8g467800 | 38.889 | 450 | 213 | 13 | 5 | 414 | 2 | 429 | 1.88e-81 | 258 |
MS.gene61469.t1 | MTR_4g024710 | 49.147 | 293 | 139 | 4 | 154 | 439 | 58 | 347 | 3.19e-80 | 252 |
MS.gene61469.t1 | MTR_5g092960 | 41.020 | 451 | 212 | 15 | 17 | 430 | 19 | 452 | 1.03e-79 | 254 |
MS.gene61469.t1 | MTR_4g113810 | 72.619 | 168 | 25 | 2 | 111 | 257 | 1 | 168 | 6.64e-78 | 239 |
MS.gene61469.t1 | MTR_8g468840 | 38.330 | 467 | 236 | 15 | 1 | 436 | 2 | 447 | 8.64e-78 | 249 |
MS.gene61469.t1 | MTR_8g468810 | 39.434 | 459 | 216 | 17 | 1 | 418 | 1 | 438 | 1.67e-77 | 248 |
MS.gene61469.t1 | MTR_4g024745 | 50.719 | 278 | 124 | 5 | 153 | 422 | 11 | 283 | 2.48e-73 | 232 |
MS.gene61469.t1 | MTR_8g058970 | 38.697 | 491 | 232 | 20 | 3 | 439 | 2 | 477 | 9.92e-73 | 236 |
MS.gene61469.t1 | MTR_4g032730 | 36.876 | 461 | 223 | 18 | 1 | 413 | 1 | 441 | 1.69e-66 | 220 |
MS.gene61469.t1 | MTR_8g469020 | 36.653 | 472 | 233 | 19 | 12 | 439 | 2 | 451 | 3.45e-66 | 219 |
MS.gene61469.t1 | MTR_8g014210 | 52.564 | 234 | 99 | 5 | 212 | 439 | 4 | 231 | 2.20e-64 | 207 |
MS.gene61469.t1 | MTR_8g062080 | 34.526 | 475 | 235 | 18 | 5 | 439 | 7 | 445 | 1.40e-61 | 206 |
MS.gene61469.t1 | MTR_8g070950 | 36.831 | 467 | 234 | 20 | 1 | 439 | 1 | 434 | 2.48e-61 | 206 |
MS.gene61469.t1 | MTR_8g058965 | 36.632 | 475 | 234 | 16 | 12 | 439 | 2 | 456 | 3.45e-61 | 206 |
MS.gene61469.t1 | MTR_8g062010 | 35.667 | 457 | 240 | 18 | 8 | 439 | 3 | 430 | 3.17e-60 | 202 |
MS.gene61469.t1 | MTR_8g062310 | 35.421 | 463 | 229 | 17 | 6 | 439 | 7 | 428 | 5.81e-60 | 202 |
MS.gene61469.t1 | MTR_5g092960 | 41.033 | 368 | 171 | 12 | 17 | 353 | 19 | 371 | 1.62e-58 | 197 |
MS.gene61469.t1 | MTR_8g468760 | 35.463 | 454 | 214 | 13 | 10 | 430 | 2 | 409 | 6.34e-57 | 193 |
MS.gene61469.t1 | MTR_4g050250 | 36.047 | 430 | 213 | 16 | 3 | 385 | 4 | 418 | 8.95e-57 | 193 |
MS.gene61469.t1 | MTR_8g468810 | 37.755 | 392 | 184 | 15 | 1 | 353 | 1 | 371 | 9.61e-57 | 192 |
MS.gene61469.t1 | MTR_8g467800 | 35.866 | 329 | 159 | 10 | 5 | 302 | 2 | 309 | 1.52e-44 | 159 |
MS.gene61469.t1 | MTR_8g014230 | 78.261 | 92 | 20 | 0 | 348 | 439 | 13 | 104 | 4.29e-44 | 150 |
MS.gene61469.t1 | MTR_8g062300 | 32.220 | 509 | 243 | 23 | 1 | 439 | 1 | 477 | 2.94e-43 | 158 |
MS.gene61469.t1 | MTR_8g468810 | 35.522 | 335 | 163 | 11 | 1 | 302 | 1 | 315 | 5.31e-43 | 154 |
MS.gene61469.t1 | MTR_8g468810 | 35.821 | 335 | 162 | 12 | 1 | 302 | 1 | 315 | 7.03e-43 | 154 |
MS.gene61469.t1 | MTR_8g468810 | 35.821 | 335 | 162 | 12 | 1 | 302 | 1 | 315 | 7.68e-43 | 154 |
MS.gene61469.t1 | MTR_8g014220 | 43.256 | 215 | 48 | 5 | 1 | 196 | 1 | 160 | 7.55e-39 | 138 |
MS.gene61469.t1 | MTR_8g467790 | 30.446 | 404 | 190 | 17 | 17 | 386 | 148 | 494 | 4.52e-38 | 145 |
MS.gene61469.t1 | MTR_5g021550 | 48.299 | 147 | 61 | 2 | 5 | 148 | 4 | 138 | 2.98e-37 | 134 |
MS.gene61469.t1 | MTR_8g014290 | 45.522 | 134 | 67 | 2 | 15 | 148 | 8 | 135 | 6.75e-32 | 119 |
MS.gene61469.t1 | MTR_5g084070 | 30.415 | 434 | 230 | 14 | 6 | 408 | 2 | 394 | 7.64e-32 | 126 |
MS.gene61469.t1 | MTR_1g041245 | 30.930 | 430 | 207 | 16 | 17 | 425 | 11 | 371 | 3.05e-31 | 124 |
MS.gene61469.t1 | MTR_4g024720 | 46.763 | 139 | 60 | 4 | 1 | 138 | 1 | 126 | 5.71e-31 | 118 |
MS.gene61469.t1 | MTR_2g086020 | 32.683 | 410 | 167 | 19 | 43 | 439 | 2 | 315 | 1.09e-27 | 112 |
MS.gene61469.t1 | MTR_7g056433 | 27.938 | 451 | 234 | 18 | 12 | 439 | 7 | 389 | 5.61e-27 | 112 |
MS.gene61469.t1 | MTR_7g032380 | 28.125 | 416 | 207 | 12 | 17 | 425 | 11 | 341 | 5.76e-26 | 108 |
MS.gene61469.t1 | MTR_5g080710 | 28.341 | 434 | 239 | 14 | 9 | 408 | 25 | 420 | 2.49e-25 | 108 |
MS.gene61469.t1 | MTR_7g033915 | 27.626 | 438 | 206 | 15 | 17 | 433 | 11 | 358 | 7.95e-24 | 102 |
MS.gene61469.t1 | MTR_7g098510 | 26.282 | 468 | 236 | 17 | 2 | 439 | 3 | 391 | 9.72e-24 | 102 |
MS.gene61469.t1 | MTR_7g034115 | 25.463 | 432 | 235 | 14 | 17 | 430 | 11 | 373 | 1.19e-23 | 102 |
MS.gene61469.t1 | MTR_7g115270 | 27.231 | 437 | 238 | 17 | 16 | 432 | 11 | 387 | 1.80e-23 | 102 |
MS.gene61469.t1 | MTR_4g056040 | 27.766 | 479 | 270 | 19 | 12 | 435 | 4 | 461 | 2.62e-23 | 102 |
MS.gene61469.t1 | MTR_3g108560 | 26.355 | 406 | 226 | 11 | 14 | 410 | 17 | 358 | 4.93e-23 | 100 |
MS.gene61469.t1 | MTR_4g080787 | 26.452 | 465 | 262 | 20 | 16 | 428 | 18 | 454 | 6.96e-23 | 101 |
MS.gene61469.t1 | MTR_7g098570 | 27.231 | 437 | 242 | 16 | 7 | 430 | 10 | 383 | 3.66e-22 | 99.0 |
MS.gene61469.t1 | MTR_6g022500 | 27.962 | 422 | 195 | 15 | 17 | 408 | 101 | 443 | 3.76e-22 | 99.0 |
MS.gene61469.t1 | MTR_4g024770 | 58.462 | 65 | 27 | 0 | 1 | 65 | 8 | 72 | 1.11e-21 | 89.0 |
MS.gene61469.t1 | MTR_3g105060 | 27.143 | 420 | 201 | 15 | 17 | 414 | 14 | 350 | 3.21e-21 | 95.1 |
MS.gene61469.t1 | MTR_7g056430 | 27.907 | 430 | 213 | 16 | 16 | 430 | 8 | 355 | 3.98e-21 | 97.1 |
MS.gene61469.t1 | MTR_7g056420 | 27.907 | 430 | 213 | 16 | 16 | 430 | 8 | 355 | 4.52e-21 | 96.7 |
MS.gene61469.t1 | MTR_3g108150 | 25.591 | 465 | 201 | 16 | 16 | 432 | 12 | 379 | 5.67e-21 | 94.7 |
MS.gene61469.t1 | MTR_5g073370 | 27.934 | 426 | 203 | 17 | 14 | 413 | 2 | 349 | 6.05e-21 | 94.4 |
MS.gene61469.t1 | MTR_2g072720 | 25.169 | 445 | 259 | 15 | 5 | 406 | 27 | 440 | 7.45e-21 | 95.1 |
MS.gene61469.t1 | MTR_3g082890 | 27.426 | 474 | 239 | 17 | 1 | 439 | 81 | 484 | 9.97e-21 | 94.7 |
MS.gene61469.t1 | MTR_5g039950 | 24.018 | 433 | 238 | 13 | 8 | 408 | 14 | 387 | 2.00e-20 | 93.2 |
MS.gene61469.t1 | MTR_7g026500 | 26.620 | 432 | 218 | 17 | 3 | 406 | 2 | 362 | 3.98e-20 | 92.4 |
MS.gene61469.t1 | MTR_2g036470 | 25.408 | 429 | 228 | 16 | 3 | 408 | 4 | 363 | 4.23e-20 | 92.0 |
MS.gene61469.t1 | MTR_3g107100 | 25.814 | 430 | 217 | 15 | 11 | 412 | 5 | 360 | 4.41e-20 | 92.0 |
MS.gene61469.t1 | MTR_7g032370 | 26.161 | 409 | 217 | 11 | 29 | 425 | 2 | 337 | 1.57e-19 | 89.7 |
MS.gene61469.t1 | MTR_7g098480 | 24.838 | 463 | 232 | 12 | 2 | 432 | 3 | 381 | 1.78e-19 | 90.9 |
MS.gene61469.t1 | MTR_8g014180 | 64.815 | 54 | 19 | 0 | 1 | 54 | 1 | 54 | 1.99e-19 | 82.0 |
MS.gene61469.t1 | MTR_4g056070 | 28.256 | 453 | 236 | 20 | 12 | 394 | 4 | 437 | 2.64e-19 | 90.1 |
MS.gene61469.t1 | MTR_0543s0010 | 26.009 | 446 | 242 | 20 | 8 | 438 | 77 | 449 | 6.21e-19 | 89.0 |
MS.gene61469.t1 | MTR_4g080773 | 26.350 | 463 | 268 | 20 | 16 | 428 | 18 | 457 | 7.24e-19 | 89.4 |
MS.gene61469.t1 | MTR_4g080773 | 26.350 | 463 | 268 | 20 | 16 | 428 | 18 | 457 | 8.51e-19 | 89.0 |
MS.gene61469.t1 | MTR_7g056447 | 35.000 | 200 | 91 | 6 | 16 | 198 | 8 | 185 | 1.72e-18 | 85.9 |
MS.gene61469.t1 | MTR_7g033990 | 26.593 | 455 | 207 | 17 | 17 | 433 | 11 | 376 | 3.96e-18 | 86.3 |
MS.gene61469.t1 | MTR_0492s0020 | 25.170 | 441 | 227 | 16 | 8 | 426 | 77 | 436 | 4.52e-18 | 86.3 |
MS.gene61469.t1 | MTR_1g108820 | 26.429 | 420 | 208 | 16 | 17 | 409 | 8 | 353 | 5.03e-18 | 85.9 |
MS.gene61469.t1 | MTR_4g055990 | 26.210 | 496 | 268 | 20 | 12 | 435 | 4 | 473 | 6.39e-18 | 86.3 |
MS.gene61469.t1 | MTR_4g055990 | 26.210 | 496 | 268 | 20 | 12 | 435 | 4 | 473 | 6.83e-18 | 86.3 |
MS.gene61469.t1 | MTR_1g085120 | 25.408 | 429 | 248 | 12 | 16 | 430 | 91 | 461 | 1.65e-17 | 85.1 |
MS.gene61469.t1 | MTR_4g056020 | 25.977 | 435 | 235 | 18 | 12 | 397 | 4 | 400 | 3.08e-17 | 84.0 |
MS.gene61469.t1 | MTR_1g085120 | 25.408 | 429 | 248 | 12 | 16 | 430 | 166 | 536 | 3.12e-17 | 84.3 |
MS.gene61469.t1 | MTR_3g036250 | 25.653 | 421 | 214 | 16 | 14 | 414 | 2 | 343 | 4.47e-17 | 82.8 |
MS.gene61469.t1 | MTR_5g073420 | 26.492 | 419 | 196 | 16 | 17 | 408 | 11 | 344 | 7.16e-17 | 82.4 |
MS.gene61469.t1 | MTR_3g113782 | 50.000 | 64 | 32 | 0 | 1 | 64 | 1 | 64 | 1.39e-16 | 75.1 |
MS.gene61469.t1 | MTR_1089s0010 | 24.939 | 409 | 219 | 13 | 17 | 409 | 8 | 344 | 1.58e-16 | 81.3 |
MS.gene61469.t1 | MTR_3g023630 | 24.528 | 424 | 208 | 16 | 17 | 411 | 8 | 348 | 1.58e-16 | 81.3 |
MS.gene61469.t1 | MTR_5g008950 | 25.527 | 427 | 221 | 18 | 19 | 425 | 1 | 350 | 1.92e-16 | 80.9 |
MS.gene61469.t1 | MTR_1g038710 | 25.664 | 452 | 263 | 16 | 2 | 408 | 4 | 427 | 3.04e-16 | 80.9 |
MS.gene61469.t1 | MTR_3g109982 | 25.370 | 473 | 255 | 20 | 6 | 410 | 2 | 444 | 1.17e-15 | 79.7 |
MS.gene61469.t1 | MTR_3g099830 | 26.139 | 417 | 201 | 19 | 17 | 408 | 12 | 346 | 1.49e-15 | 78.2 |
MS.gene61469.t1 | MTR_2g007500 | 30.916 | 262 | 122 | 11 | 7 | 240 | 4 | 234 | 4.64e-15 | 76.3 |
MS.gene61469.t1 | MTR_5g058100 | 26.905 | 420 | 209 | 21 | 17 | 412 | 9 | 354 | 5.73e-15 | 76.6 |
MS.gene61469.t1 | MTR_3g082890 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 6.46e-15 | 76.6 |
MS.gene61469.t1 | MTR_4g055580 | 25.000 | 492 | 273 | 18 | 12 | 435 | 95 | 558 | 7.15e-15 | 77.0 |
MS.gene61469.t1 | MTR_7g055943 | 25.236 | 424 | 210 | 16 | 17 | 408 | 40 | 388 | 8.03e-15 | 76.6 |
MS.gene61469.t1 | MTR_3g040700 | 24.020 | 408 | 202 | 16 | 15 | 398 | 41 | 364 | 1.22e-14 | 75.9 |
MS.gene61469.t1 | MTR_3g108560 | 25.581 | 344 | 185 | 10 | 14 | 350 | 17 | 296 | 5.14e-14 | 73.2 |
MS.gene61469.t1 | MTR_3g114200 | 53.030 | 66 | 27 | 2 | 4 | 65 | 2 | 67 | 8.17e-14 | 69.3 |
MS.gene61469.t1 | MTR_7g098590 | 48.571 | 70 | 35 | 1 | 3 | 71 | 4 | 73 | 1.11e-13 | 68.2 |
MS.gene61469.t1 | MTR_0009s0080 | 23.799 | 458 | 248 | 17 | 6 | 437 | 8 | 390 | 1.40e-13 | 72.8 |
MS.gene61469.t1 | MTR_3g023270 | 25.519 | 337 | 168 | 14 | 7 | 304 | 2 | 294 | 3.21e-13 | 70.9 |
MS.gene61469.t1 | MTR_7g081290 | 53.333 | 60 | 28 | 0 | 6 | 65 | 7 | 66 | 3.24e-13 | 69.7 |
MS.gene61469.t1 | MTR_6g011460 | 24.940 | 417 | 211 | 14 | 17 | 408 | 46 | 385 | 3.25e-13 | 71.6 |
MS.gene61469.t1 | MTR_5g008920 | 24.471 | 425 | 222 | 15 | 7 | 408 | 2 | 350 | 3.46e-13 | 71.2 |
MS.gene61469.t1 | MTR_5g007090 | 24.554 | 448 | 248 | 19 | 11 | 406 | 22 | 431 | 5.50e-13 | 71.2 |
MS.gene61469.t1 | MTR_1g115245 | 28.148 | 270 | 140 | 11 | 2 | 251 | 12 | 247 | 5.93e-13 | 69.7 |
MS.gene61469.t1 | MTR_7g033945 | 57.143 | 56 | 23 | 1 | 17 | 71 | 11 | 66 | 7.60e-13 | 67.0 |
MS.gene61469.t1 | MTR_7g033940 | 60.417 | 48 | 19 | 0 | 19 | 66 | 96 | 143 | 8.52e-13 | 67.8 |
MS.gene61469.t1 | MTR_5g039490 | 21.564 | 422 | 238 | 14 | 1 | 408 | 1 | 343 | 1.34e-12 | 69.3 |
MS.gene61469.t1 | MTR_1g108820 | 29.717 | 212 | 102 | 8 | 17 | 208 | 8 | 192 | 1.38e-12 | 68.9 |
MS.gene61469.t1 | MTR_4g032845 | 24.000 | 425 | 268 | 14 | 16 | 406 | 2 | 405 | 1.75e-12 | 69.3 |
MS.gene61469.t1 | MTR_3g467400 | 55.172 | 58 | 25 | 1 | 17 | 73 | 3 | 60 | 1.82e-12 | 68.9 |
MS.gene61469.t1 | MTR_1g016340 | 24.609 | 447 | 257 | 16 | 7 | 412 | 9 | 416 | 2.20e-12 | 68.9 |
MS.gene61469.t1 | MTR_1g038760 | 48.333 | 60 | 31 | 0 | 8 | 67 | 6 | 65 | 2.26e-12 | 68.6 |
MS.gene61469.t1 | MTR_1g016340 | 24.609 | 447 | 257 | 16 | 7 | 412 | 4 | 411 | 2.39e-12 | 68.9 |
MS.gene61469.t1 | MTR_1g038760 | 48.333 | 60 | 31 | 0 | 8 | 67 | 6 | 65 | 2.53e-12 | 68.2 |
MS.gene61469.t1 | MTR_3g107120 | 29.680 | 219 | 110 | 10 | 11 | 202 | 3 | 204 | 2.94e-12 | 68.6 |
MS.gene61469.t1 | MTR_7g034110 | 27.315 | 216 | 96 | 7 | 17 | 202 | 11 | 195 | 3.42e-12 | 67.8 |
MS.gene61469.t1 | MTR_3g048290 | 23.207 | 474 | 261 | 18 | 17 | 428 | 23 | 455 | 5.16e-12 | 68.2 |
MS.gene61469.t1 | MTR_7g110960 | 52.083 | 48 | 23 | 0 | 4 | 51 | 3 | 50 | 1.33e-11 | 60.1 |
MS.gene61469.t1 | MTR_8g085430 | 55.357 | 56 | 24 | 1 | 17 | 71 | 11 | 66 | 1.36e-11 | 65.9 |
MS.gene61469.t1 | MTR_2g082880 | 24.654 | 434 | 255 | 16 | 11 | 408 | 4 | 401 | 1.63e-11 | 66.2 |
MS.gene61469.t1 | MTR_2g101950 | 25.806 | 310 | 168 | 11 | 8 | 296 | 29 | 297 | 1.64e-11 | 65.9 |
MS.gene61469.t1 | MTR_2g101950 | 25.806 | 310 | 168 | 11 | 8 | 296 | 71 | 339 | 1.73e-11 | 65.9 |
MS.gene61469.t1 | MTR_8g017280 | 41.538 | 65 | 34 | 1 | 11 | 71 | 30 | 94 | 1.89e-11 | 65.1 |
MS.gene61469.t1 | MTR_6g045333 | 22.353 | 425 | 247 | 17 | 4 | 408 | 52 | 413 | 2.03e-11 | 65.9 |
MS.gene61469.t1 | MTR_5g083890 | 62.500 | 48 | 18 | 0 | 16 | 63 | 5 | 52 | 2.08e-11 | 66.2 |
MS.gene61469.t1 | MTR_4g134150 | 29.756 | 205 | 97 | 8 | 16 | 202 | 13 | 188 | 2.91e-11 | 63.5 |
MS.gene61469.t1 | MTR_1g066830 | 23.544 | 412 | 231 | 13 | 17 | 409 | 8 | 354 | 3.44e-11 | 65.1 |
MS.gene61469.t1 | MTR_8g017280 | 42.188 | 64 | 33 | 1 | 12 | 71 | 31 | 94 | 3.48e-11 | 65.1 |
MS.gene61469.t1 | MTR_2g101950 | 25.806 | 310 | 168 | 11 | 8 | 296 | 70 | 338 | 3.56e-11 | 65.1 |
MS.gene61469.t1 | MTR_1g095750 | 40.964 | 83 | 45 | 1 | 5 | 83 | 34 | 116 | 3.57e-11 | 61.2 |
MS.gene61469.t1 | MTR_2g101950 | 25.806 | 310 | 168 | 11 | 8 | 296 | 71 | 339 | 3.60e-11 | 65.1 |
MS.gene61469.t1 | MTR_2g094750 | 25.990 | 404 | 218 | 17 | 9 | 353 | 82 | 463 | 3.61e-11 | 65.5 |
MS.gene61469.t1 | MTR_7g007340 | 30.732 | 205 | 103 | 6 | 6 | 203 | 2 | 174 | 4.07e-11 | 64.7 |
MS.gene61469.t1 | MTR_5g087940 | 54.098 | 61 | 25 | 2 | 6 | 63 | 14 | 74 | 5.66e-11 | 64.3 |
MS.gene61469.t1 | MTR_3g026920 | 21.395 | 430 | 245 | 14 | 11 | 408 | 13 | 381 | 6.04e-11 | 64.3 |
MS.gene61469.t1 | MTR_2g082860 | 51.724 | 58 | 27 | 1 | 6 | 63 | 17 | 73 | 6.83e-11 | 60.1 |
MS.gene61469.t1 | MTR_2g007400 | 25.000 | 444 | 249 | 21 | 8 | 425 | 3 | 388 | 8.89e-11 | 63.9 |
MS.gene61469.t1 | MTR_7g114710 | 27.143 | 210 | 106 | 6 | 17 | 204 | 13 | 197 | 8.94e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61469.t1 | AT4G26340 | 26.742 | 445 | 254 | 16 | 17 | 428 | 2 | 407 | 4.14e-26 | 110 |
MS.gene61469.t1 | AT3G50710 | 29.318 | 440 | 223 | 20 | 17 | 412 | 2 | 397 | 4.29e-22 | 98.6 |
MS.gene61469.t1 | AT4G10400 | 25.472 | 424 | 237 | 16 | 17 | 408 | 2 | 378 | 5.37e-21 | 95.1 |
MS.gene61469.t1 | AT4G10400 | 25.472 | 424 | 237 | 16 | 17 | 408 | 2 | 378 | 5.37e-21 | 95.1 |
MS.gene61469.t1 | AT4G10400 | 25.472 | 424 | 237 | 16 | 17 | 408 | 2 | 378 | 5.37e-21 | 95.1 |
MS.gene61469.t1 | AT3G60040 | 26.492 | 419 | 229 | 19 | 16 | 390 | 12 | 395 | 1.04e-20 | 95.1 |
MS.gene61469.t1 | AT3G60040 | 26.841 | 421 | 225 | 20 | 16 | 390 | 231 | 614 | 1.81e-20 | 94.7 |
MS.gene61469.t1 | AT3G60040 | 26.841 | 421 | 225 | 20 | 16 | 390 | 232 | 615 | 1.81e-20 | 94.7 |
MS.gene61469.t1 | AT3G60040 | 26.492 | 419 | 229 | 19 | 16 | 390 | 229 | 612 | 2.18e-20 | 94.4 |
MS.gene61469.t1 | AT3G60040 | 26.492 | 419 | 229 | 19 | 16 | 390 | 231 | 614 | 2.35e-20 | 94.4 |
MS.gene61469.t1 | AT4G00160 | 28.298 | 470 | 259 | 21 | 1 | 430 | 1 | 432 | 2.47e-18 | 87.4 |
MS.gene61469.t1 | AT5G53840 | 25.670 | 448 | 268 | 18 | 15 | 430 | 16 | 430 | 2.54e-18 | 87.4 |
MS.gene61469.t1 | AT5G56420 | 25.943 | 424 | 244 | 17 | 16 | 408 | 5 | 389 | 1.13e-17 | 85.1 |
MS.gene61469.t1 | AT5G56420 | 25.943 | 424 | 244 | 17 | 16 | 408 | 5 | 389 | 1.13e-17 | 85.1 |
MS.gene61469.t1 | AT5G56420 | 25.943 | 424 | 244 | 17 | 16 | 408 | 5 | 389 | 1.13e-17 | 85.1 |
MS.gene61469.t1 | AT2G26860 | 27.211 | 441 | 234 | 17 | 17 | 412 | 2 | 400 | 7.12e-17 | 82.8 |
MS.gene61469.t1 | AT2G26860 | 27.211 | 441 | 234 | 17 | 17 | 412 | 2 | 400 | 7.12e-17 | 82.8 |
MS.gene61469.t1 | AT2G04230 | 25.107 | 466 | 273 | 22 | 10 | 432 | 6 | 438 | 1.02e-16 | 82.4 |
MS.gene61469.t1 | AT5G22730 | 23.516 | 438 | 260 | 17 | 16 | 408 | 27 | 434 | 1.92e-16 | 81.6 |
MS.gene61469.t1 | AT5G22730 | 23.516 | 438 | 260 | 17 | 16 | 408 | 27 | 434 | 1.92e-16 | 81.6 |
MS.gene61469.t1 | AT3G59200 | 30.392 | 204 | 105 | 6 | 17 | 200 | 7 | 193 | 3.06e-16 | 80.5 |
MS.gene61469.t1 | AT5G56560 | 27.040 | 429 | 229 | 22 | 14 | 404 | 2 | 384 | 3.62e-16 | 80.5 |
MS.gene61469.t1 | AT3G59200 | 30.392 | 204 | 105 | 6 | 17 | 200 | 7 | 193 | 6.45e-16 | 80.1 |
MS.gene61469.t1 | AT3G58900 | 26.648 | 349 | 172 | 14 | 17 | 306 | 2 | 325 | 8.27e-16 | 78.6 |
MS.gene61469.t1 | AT3G58900 | 26.648 | 349 | 172 | 14 | 17 | 306 | 2 | 325 | 8.27e-16 | 78.6 |
MS.gene61469.t1 | AT4G13965 | 25.503 | 447 | 257 | 17 | 17 | 430 | 10 | 413 | 9.55e-16 | 79.3 |
MS.gene61469.t1 | AT1G78750 | 24.837 | 459 | 267 | 20 | 1 | 410 | 1 | 430 | 9.57e-16 | 79.3 |
MS.gene61469.t1 | AT1G78750 | 24.837 | 459 | 267 | 20 | 1 | 410 | 1 | 430 | 9.57e-16 | 79.3 |
MS.gene61469.t1 | AT5G56380 | 27.209 | 430 | 241 | 16 | 17 | 404 | 2 | 401 | 9.99e-16 | 79.3 |
MS.gene61469.t1 | AT5G56380 | 27.209 | 430 | 241 | 16 | 17 | 404 | 2 | 401 | 9.99e-16 | 79.3 |
MS.gene61469.t1 | AT3G58900 | 26.946 | 334 | 169 | 13 | 17 | 300 | 2 | 310 | 1.30e-15 | 77.8 |
MS.gene61469.t1 | AT1G69630 | 25.983 | 458 | 256 | 21 | 1 | 410 | 1 | 423 | 1.83e-15 | 78.6 |
MS.gene61469.t1 | AT3G52680 | 25.703 | 498 | 251 | 24 | 1 | 438 | 6 | 444 | 4.60e-15 | 77.4 |
MS.gene61469.t1 | AT3G58900 | 25.982 | 331 | 176 | 12 | 17 | 300 | 2 | 310 | 5.18e-15 | 77.4 |
MS.gene61469.t1 | AT1G16930 | 23.830 | 470 | 290 | 15 | 10 | 439 | 8 | 449 | 8.81e-15 | 76.6 |
MS.gene61469.t1 | AT1G16930 | 23.830 | 470 | 290 | 15 | 10 | 439 | 8 | 449 | 8.81e-15 | 76.6 |
MS.gene61469.t1 | AT1G16930 | 23.830 | 470 | 290 | 15 | 10 | 439 | 8 | 449 | 8.81e-15 | 76.6 |
MS.gene61469.t1 | AT5G22700 | 24.099 | 444 | 269 | 15 | 3 | 407 | 29 | 443 | 1.47e-14 | 75.9 |
MS.gene61469.t1 | AT5G56400 | 25.658 | 456 | 240 | 21 | 1 | 408 | 16 | 420 | 3.46e-14 | 74.7 |
MS.gene61469.t1 | AT5G38590 | 23.195 | 457 | 261 | 17 | 17 | 436 | 2 | 405 | 3.55e-14 | 74.3 |
MS.gene61469.t1 | AT3G44810 | 26.518 | 313 | 184 | 12 | 19 | 302 | 9 | 304 | 7.86e-14 | 73.6 |
MS.gene61469.t1 | AT5G22700 | 24.419 | 430 | 257 | 15 | 17 | 407 | 6 | 406 | 8.50e-14 | 73.6 |
MS.gene61469.t1 | AT5G22700 | 24.419 | 430 | 257 | 15 | 17 | 407 | 6 | 406 | 8.50e-14 | 73.6 |
MS.gene61469.t1 | AT5G22700 | 24.419 | 430 | 257 | 15 | 17 | 407 | 6 | 406 | 8.50e-14 | 73.6 |
MS.gene61469.t1 | AT5G22700 | 24.419 | 430 | 257 | 15 | 17 | 407 | 6 | 406 | 8.50e-14 | 73.6 |
MS.gene61469.t1 | AT1G06630 | 23.907 | 389 | 249 | 14 | 16 | 380 | 11 | 376 | 9.88e-14 | 73.2 |
MS.gene61469.t1 | AT1G06630 | 23.907 | 389 | 249 | 14 | 16 | 380 | 11 | 376 | 9.88e-14 | 73.2 |
MS.gene61469.t1 | AT1G06630 | 23.907 | 389 | 249 | 14 | 16 | 380 | 11 | 376 | 9.88e-14 | 73.2 |
MS.gene61469.t1 | AT1G06630 | 23.907 | 389 | 249 | 14 | 16 | 380 | 11 | 376 | 9.88e-14 | 73.2 |
MS.gene61469.t1 | AT1G06630 | 23.907 | 389 | 249 | 14 | 16 | 380 | 11 | 376 | 1.05e-13 | 73.2 |
MS.gene61469.t1 | AT1G06630 | 23.907 | 389 | 249 | 14 | 16 | 380 | 20 | 385 | 1.06e-13 | 73.2 |
MS.gene61469.t1 | AT1G06630 | 27.193 | 228 | 133 | 7 | 16 | 223 | 11 | 225 | 1.20e-13 | 72.0 |
MS.gene61469.t1 | AT5G38570 | 24.495 | 396 | 235 | 13 | 17 | 405 | 2 | 340 | 1.40e-13 | 72.4 |
MS.gene61469.t1 | AT1G06630 | 26.337 | 243 | 146 | 7 | 16 | 238 | 11 | 240 | 1.97e-13 | 71.6 |
MS.gene61469.t1 | AT1G06630 | 26.337 | 243 | 146 | 7 | 16 | 238 | 11 | 240 | 1.97e-13 | 71.6 |
MS.gene61469.t1 | AT5G56390 | 26.174 | 447 | 250 | 17 | 17 | 423 | 2 | 408 | 2.25e-13 | 72.0 |
MS.gene61469.t1 | AT5G25860 | 23.758 | 463 | 274 | 17 | 9 | 425 | 4 | 433 | 2.39e-13 | 72.0 |
MS.gene61469.t1 | AT3G58860 | 27.160 | 243 | 145 | 8 | 14 | 238 | 4 | 232 | 4.27e-13 | 71.2 |
MS.gene61469.t1 | AT3G14710 | 22.902 | 441 | 263 | 15 | 5 | 408 | 13 | 413 | 4.62e-13 | 71.2 |
MS.gene61469.t1 | AT3G26920 | 27.431 | 288 | 175 | 11 | 170 | 438 | 67 | 339 | 1.04e-12 | 69.3 |
MS.gene61469.t1 | AT3G26920 | 27.431 | 288 | 175 | 11 | 170 | 438 | 67 | 339 | 1.04e-12 | 69.3 |
MS.gene61469.t1 | AT4G13985 | 23.778 | 450 | 278 | 17 | 1 | 408 | 1 | 427 | 1.15e-12 | 70.1 |
MS.gene61469.t1 | AT5G22610 | 23.266 | 447 | 260 | 17 | 1 | 408 | 1 | 403 | 1.42e-12 | 69.7 |
MS.gene61469.t1 | AT3G49020 | 25.054 | 459 | 262 | 23 | 8 | 425 | 13 | 430 | 1.75e-12 | 69.3 |
MS.gene61469.t1 | AT5G44490 | 23.230 | 452 | 272 | 20 | 1 | 408 | 1 | 421 | 1.96e-12 | 69.3 |
MS.gene61469.t1 | AT5G44490 | 23.230 | 452 | 272 | 20 | 1 | 408 | 1 | 421 | 2.01e-12 | 69.3 |
MS.gene61469.t1 | AT1G49610 | 28.829 | 222 | 105 | 8 | 10 | 227 | 19 | 191 | 3.14e-12 | 68.2 |
MS.gene61469.t1 | AT3G58940 | 28.037 | 214 | 108 | 8 | 17 | 201 | 2 | 198 | 3.88e-12 | 68.6 |
MS.gene61469.t1 | AT3G58940 | 28.037 | 214 | 108 | 8 | 17 | 201 | 2 | 198 | 3.88e-12 | 68.6 |
MS.gene61469.t1 | AT5G22610 | 23.922 | 464 | 266 | 20 | 1 | 408 | 1 | 433 | 5.78e-12 | 67.8 |
MS.gene61469.t1 | AT5G53635 | 23.465 | 456 | 281 | 17 | 19 | 438 | 2 | 425 | 7.81e-12 | 67.4 |
MS.gene61469.t1 | AT3G03040 | 26.549 | 339 | 174 | 13 | 17 | 306 | 2 | 314 | 7.94e-12 | 67.4 |
MS.gene61469.t1 | AT4G09920 | 28.879 | 232 | 114 | 9 | 17 | 223 | 2 | 207 | 8.59e-12 | 66.2 |
MS.gene61469.t1 | AT4G09920 | 28.879 | 232 | 114 | 9 | 17 | 223 | 2 | 207 | 8.59e-12 | 66.2 |
MS.gene61469.t1 | AT4G09920 | 28.879 | 232 | 114 | 9 | 17 | 223 | 2 | 207 | 8.59e-12 | 66.2 |
MS.gene61469.t1 | AT5G22660 | 24.942 | 429 | 252 | 15 | 16 | 404 | 12 | 410 | 9.65e-12 | 67.0 |
MS.gene61469.t1 | AT5G38396 | 24.159 | 327 | 194 | 12 | 17 | 304 | 2 | 313 | 1.11e-11 | 67.0 |
MS.gene61469.t1 | AT4G09920 | 29.469 | 207 | 97 | 8 | 17 | 200 | 2 | 182 | 1.28e-11 | 65.9 |
MS.gene61469.t1 | AT4G09920 | 29.469 | 207 | 97 | 8 | 17 | 200 | 2 | 182 | 1.28e-11 | 65.9 |
MS.gene61469.t1 | AT4G13960 | 32.576 | 132 | 75 | 3 | 17 | 148 | 2 | 119 | 1.81e-11 | 66.2 |
MS.gene61469.t1 | AT4G13960 | 32.576 | 132 | 75 | 3 | 17 | 148 | 2 | 119 | 1.81e-11 | 66.2 |
MS.gene61469.t1 | AT3G58880 | 26.542 | 373 | 214 | 17 | 17 | 351 | 3 | 353 | 1.97e-11 | 66.2 |
MS.gene61469.t1 | AT5G38386 | 26.736 | 288 | 156 | 14 | 17 | 294 | 2 | 244 | 2.13e-11 | 65.9 |
MS.gene61469.t1 | AT5G38386 | 26.736 | 288 | 156 | 14 | 17 | 294 | 2 | 244 | 2.13e-11 | 65.9 |
MS.gene61469.t1 | AT3G42770 | 25.362 | 414 | 245 | 19 | 19 | 399 | 1 | 383 | 2.14e-11 | 66.2 |
MS.gene61469.t1 | AT5G44960 | 25.641 | 429 | 240 | 19 | 14 | 408 | 2 | 385 | 2.27e-11 | 65.9 |
MS.gene61469.t1 | AT4G14103 | 29.004 | 231 | 121 | 10 | 15 | 222 | 6 | 216 | 2.40e-11 | 65.5 |
MS.gene61469.t1 | AT4G14103 | 29.004 | 231 | 121 | 10 | 15 | 222 | 6 | 216 | 2.40e-11 | 65.5 |
MS.gene61469.t1 | AT5G22670 | 23.095 | 433 | 265 | 14 | 10 | 404 | 4 | 406 | 2.41e-11 | 65.9 |
MS.gene61469.t1 | AT4G14103 | 29.565 | 230 | 119 | 11 | 16 | 222 | 7 | 216 | 2.68e-11 | 65.9 |
MS.gene61469.t1 | AT4G27050 | 31.579 | 209 | 107 | 10 | 17 | 200 | 4 | 201 | 2.78e-11 | 65.9 |
MS.gene61469.t1 | AT4G27050 | 31.579 | 209 | 107 | 10 | 17 | 200 | 4 | 201 | 2.78e-11 | 65.9 |
MS.gene61469.t1 | AT4G27050 | 31.579 | 209 | 107 | 10 | 17 | 200 | 4 | 201 | 2.78e-11 | 65.9 |
MS.gene61469.t1 | AT4G27050 | 31.579 | 209 | 107 | 10 | 17 | 200 | 4 | 201 | 2.78e-11 | 65.9 |
MS.gene61469.t1 | AT4G27050 | 31.579 | 209 | 107 | 10 | 17 | 200 | 4 | 201 | 2.78e-11 | 65.9 |
MS.gene61469.t1 | AT3G59000 | 34.074 | 135 | 69 | 4 | 17 | 148 | 2 | 119 | 3.12e-11 | 65.1 |
MS.gene61469.t1 | AT3G59190 | 28.226 | 248 | 132 | 12 | 5 | 226 | 2 | 229 | 4.01e-11 | 65.1 |
MS.gene61469.t1 | AT5G38392 | 28.889 | 225 | 131 | 9 | 17 | 233 | 2 | 205 | 4.14e-11 | 62.8 |
MS.gene61469.t1 | AT3G58930 | 29.323 | 133 | 80 | 3 | 17 | 149 | 2 | 120 | 8.58e-11 | 64.3 |
MS.gene61469.t1 | AT3G58930 | 29.323 | 133 | 80 | 3 | 17 | 149 | 2 | 120 | 8.58e-11 | 64.3 |
MS.gene61469.t1 | AT3G58930 | 29.323 | 133 | 80 | 3 | 17 | 149 | 2 | 120 | 8.58e-11 | 64.3 |
MS.gene61469.t1 | AT3G59000 | 34.074 | 135 | 69 | 4 | 17 | 148 | 2 | 119 | 8.73e-11 | 64.3 |
MS.gene61469.t1 | AT5G54820 | 28.151 | 238 | 128 | 10 | 15 | 232 | 5 | 219 | 9.11e-11 | 63.9 |
Find 86 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAATTAAATGGCAGAATTC+TGG | 0.255043 | 8.3:-13476330 | None:intergenic |
AAAATACGCCGTTTACAAAA+AGG | 0.268378 | 8.3:-13475249 | None:intergenic |
GCTTGTTTCAACAGAGCTTT+TGG | 0.290992 | 8.3:-13475080 | None:intergenic |
TAACGTTTCCGAATCTGATT+TGG | 0.294060 | 8.3:-13475898 | None:intergenic |
TTCCTCGAGTGATCATTCTT+TGG | 0.294564 | 8.3:+13475964 | MS.gene61469:CDS |
ATTCTGCCATTTAATTCATT+TGG | 0.301991 | 8.3:+13476335 | MS.gene61469:CDS |
ACGCATCTTCTGAATTTGAT+AGG | 0.307512 | 8.3:-13475287 | None:intergenic |
CTCGCAGATGGCGCAACATT+TGG | 0.322807 | 8.3:+13475110 | MS.gene61469:CDS |
TGAGTTCCAAATGAATTAAA+TGG | 0.327000 | 8.3:-13476341 | None:intergenic |
GATTATTGATGATATTTCAT+TGG | 0.361849 | 8.3:+13476785 | MS.gene61469:CDS |
GAAACTCCCTGGTATGAAAA+TGG | 0.366711 | 8.3:+13475688 | MS.gene61469:CDS |
AAGTGTGATATGATACAATT+AGG | 0.369344 | 8.3:-13476669 | None:intergenic |
ACATGGGTCCGCTCCATCAT+TGG | 0.371891 | 8.3:+13475364 | MS.gene61469:CDS |
TGGCGTAATCCTCATAATAA+AGG | 0.376607 | 8.3:-13475766 | None:intergenic |
TGACAACAAACAGTGGCTTC+TGG | 0.377083 | 8.3:+13476284 | MS.gene61469:intron |
TCAACAAATAATAGCTCATC+TGG | 0.390858 | 8.3:-13476726 | None:intergenic |
GAATACTTACCTTTATTATG+AGG | 0.396465 | 8.3:+13475757 | MS.gene61469:CDS |
TTATCCCAGAGAGAGCATTA+AGG | 0.398455 | 8.3:-13476009 | None:intergenic |
AAGCTCCTTAATGCTCTCTC+TGG | 0.404539 | 8.3:+13476004 | MS.gene61469:CDS |
CGTAGGTGGGAAACAAATAT+TGG | 0.406304 | 8.3:-13475786 | None:intergenic |
GAAATGAATGCATTCCTTGT+TGG | 0.409529 | 8.3:+13475713 | MS.gene61469:CDS |
CTTCAGTTTAAAGGATATCA+AGG | 0.411493 | 8.3:+13476699 | MS.gene61469:CDS |
AACGTTTCCGAATCTGATTT+GGG | 0.413465 | 8.3:-13475897 | None:intergenic |
AACCTTACCCAAATCAGATT+CGG | 0.426958 | 8.3:+13475890 | MS.gene61469:CDS |
GTCAAATTTGTCAAATTCAA+AGG | 0.439842 | 8.3:-13475167 | None:intergenic |
CAGCACAAGAACAAGAAGAT+AGG | 0.441410 | 8.3:+13475005 | MS.gene61469:CDS |
GAGCTTGAATAAACATTTGA+AGG | 0.443022 | 8.3:-13475987 | None:intergenic |
CATGGGTCCGCTCCATCATT+GGG | 0.443272 | 8.3:+13475365 | MS.gene61469:CDS |
GAATGTCGCACTTCTTACTT+AGG | 0.444977 | 8.3:-13476809 | None:intergenic |
ATGTGGCTCACTATACAGTC+TGG | 0.448412 | 8.3:-13475040 | None:intergenic |
TCTGGAAAATGTAGATCAGC+AGG | 0.455486 | 8.3:-13476312 | None:intergenic |
TGGCAGAGTCGAACTCTAAA+CGG | 0.464206 | 8.3:+13474975 | MS.gene61469:CDS |
CAGGAAGAGTCGCCTTTACC+AGG | 0.466233 | 8.3:+13476624 | MS.gene61469:intron |
CGCATCTTCTGAATTTGATA+GGG | 0.471086 | 8.3:-13475286 | None:intergenic |
GACAACAAACAGTGGCTTCT+GGG | 0.482789 | 8.3:+13476285 | MS.gene61469:intron |
GGGATAAAACATCTATCGTT+GGG | 0.485986 | 8.3:+13476025 | MS.gene61469:CDS |
TTCCGAATCTGATTTGGGTA+AGG | 0.486090 | 8.3:-13475892 | None:intergenic |
CTTGAGGTCATGCCCAATGA+TGG | 0.488065 | 8.3:-13475377 | None:intergenic |
ATCGTTGGTCCATGTCATCT+TGG | 0.488259 | 8.3:-13475204 | None:intergenic |
CAACTCAGTCAAATATAAGT+TGG | 0.492762 | 8.3:-13476869 | None:intergenic |
CCGCAATATCATCGAGTATG+AGG | 0.496313 | 8.3:-13475408 | None:intergenic |
TGGGATAAAACATCTATCGT+TGG | 0.498569 | 8.3:+13476024 | MS.gene61469:CDS |
ATAAGTTATATAAAGTGCTA+AGG | 0.498850 | 8.3:+13476835 | MS.gene61469:CDS |
ATTAACATGTAGTTCAGTCT+TGG | 0.508129 | 8.3:+13475602 | MS.gene61469:intron |
CTTGGTTGTGCAGCCCATCC+TGG | 0.512064 | 8.3:-13476642 | None:intergenic |
TGCAAACTCTTCAACGTAGG+TGG | 0.512529 | 8.3:-13475800 | None:intergenic |
TGTGCAGCCCATCCTGGTAA+AGG | 0.521373 | 8.3:-13476636 | None:intergenic |
AGTTTCAACTTCTTCAGTGA+TGG | 0.522559 | 8.3:-13475671 | None:intergenic |
AACATGTAGTTCAGTCTTGG+TGG | 0.524885 | 8.3:+13475605 | MS.gene61469:intron |
CTAGGATAGGGCAGCCAACA+AGG | 0.529192 | 8.3:-13475727 | None:intergenic |
ATATATACCACAATTTACTA+AGG | 0.540347 | 8.3:+13475634 | MS.gene61469:CDS |
CTGAAGAAGTTGAAACTCCC+TGG | 0.545724 | 8.3:+13475677 | MS.gene61469:CDS |
AGCTCCTTAATGCTCTCTCT+GGG | 0.549116 | 8.3:+13476005 | MS.gene61469:CDS |
GCAGATGTTCAATAGATACA+TGG | 0.554380 | 8.3:+13475347 | MS.gene61469:CDS |
TAAGTTATATAAAGTGCTAA+GGG | 0.555537 | 8.3:+13476836 | MS.gene61469:CDS |
CATCATTGGGCATGACCTCA+AGG | 0.556610 | 8.3:+13475378 | MS.gene61469:CDS |
GCAAACTCTTCAACGTAGGT+GGG | 0.556690 | 8.3:-13475799 | None:intergenic |
AAGAGTCGCCTTTACCAGGA+TGG | 0.557947 | 8.3:+13476628 | MS.gene61469:CDS |
ATTTGGAACTCATTCTTCCG+TGG | 0.566307 | 8.3:+13476352 | MS.gene61469:CDS |
TTAGGAAGAGCTTAAATCGT+TGG | 0.569149 | 8.3:-13475219 | None:intergenic |
ATGATACAATTAGGAACACT+TGG | 0.569360 | 8.3:-13476660 | None:intergenic |
TGGGTAAGGTTAAGATAGTG+AGG | 0.571605 | 8.3:-13475878 | None:intergenic |
TTATATAAAGTGCTAAGGGA+TGG | 0.571621 | 8.3:+13476840 | MS.gene61469:CDS |
TATACCACAATTTACTAAGG+TGG | 0.575916 | 8.3:+13475637 | MS.gene61469:CDS |
CTCATGTACAAAATCTCTCG+TGG | 0.589169 | 8.3:+13475312 | MS.gene61469:CDS |
TCTCATAATTCAAAATGACC+AGG | 0.592219 | 8.3:+13476428 | MS.gene61469:CDS |
ATTTGCAAACTCTTCAACGT+AGG | 0.595550 | 8.3:-13475803 | None:intergenic |
CAAATTTGACGATGATGACA+TGG | 0.595922 | 8.3:+13475180 | MS.gene61469:CDS |
CAAGCATTCTATCTCGCAGA+TGG | 0.596388 | 8.3:+13475098 | MS.gene61469:CDS |
AAAGAATGATCACTCGAGGA+AGG | 0.599289 | 8.3:-13475962 | None:intergenic |
TGAACCACCTTAGTAAATTG+TGG | 0.601928 | 8.3:-13475641 | None:intergenic |
AGAGTCGCCTTTACCAGGAT+GGG | 0.602681 | 8.3:+13476629 | MS.gene61469:CDS |
GATGTTGATATCGCTTCTGT+TGG | 0.605436 | 8.3:+13475827 | MS.gene61469:CDS |
TGTGGCTCACTATACAGTCT+GGG | 0.612098 | 8.3:-13475039 | None:intergenic |
CAGATGTTCAATAGATACAT+GGG | 0.617815 | 8.3:+13475348 | MS.gene61469:CDS |
AGAAAATTTGAGTTGAACCA+CGG | 0.622054 | 8.3:-13476369 | None:intergenic |
AGGTTAAGATAGTGAGGACA+AGG | 0.625769 | 8.3:-13475872 | None:intergenic |
GGCCAAAGAATGATCACTCG+AGG | 0.634076 | 8.3:-13475966 | None:intergenic |
TGACATGGACCAAGATGACA+TGG | 0.648584 | 8.3:+13475195 | MS.gene61469:CDS |
GTTGGGTTGCTCAACAACAA+AGG | 0.654398 | 8.3:+13476042 | MS.gene61469:CDS |
CCTCATACTCGATGATATTG+CGG | 0.656199 | 8.3:+13475408 | MS.gene61469:CDS |
CTGGAAAATGTAGATCAGCA+GGG | 0.656936 | 8.3:-13476311 | None:intergenic |
GTATGAGGTCGAGTTCCTTG+AGG | 0.658595 | 8.3:-13475393 | None:intergenic |
GGTCATGCCCAATGATGGAG+CGG | 0.674038 | 8.3:-13475372 | None:intergenic |
TTGGAAGGAAAGACATGATG+TGG | 0.683179 | 8.3:-13475057 | None:intergenic |
TTAAGATAGTGAGGACAAGG+CGG | 0.728130 | 8.3:-13475869 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAATTTCACATCATTAAG+TGG | - | chr8.3:13476503-13476522 | None:intergenic | 20.0% |
!! | ATATATACCACAATTTACTA+AGG | + | chr8.3:13475634-13475653 | MS.gene61469:CDS | 20.0% |
!! | GTATAGTTTATTATCATAGT+TGG | + | chr8.3:13476064-13476083 | MS.gene61469:intron | 20.0% |
!! | TCTAATTACAAGCTAATATT+AGG | + | chr8.3:13476245-13476264 | MS.gene61469:intron | 20.0% |
!! | TTTATCAGTCATTTACAATT+TGG | - | chr8.3:13476104-13476123 | None:intergenic | 20.0% |
!!! | ATAAGTTATATAAAGTGCTA+AGG | + | chr8.3:13476835-13476854 | MS.gene61469:CDS | 20.0% |
!!! | GATTATTGATGATATTTCAT+TGG | + | chr8.3:13476785-13476804 | MS.gene61469:CDS | 20.0% |
!!! | GTTGAGTATATTTTGAAAAA+AGG | + | chr8.3:13476744-13476763 | MS.gene61469:CDS | 20.0% |
!!! | TAAGTTATATAAAGTGCTAA+GGG | + | chr8.3:13476836-13476855 | MS.gene61469:CDS | 20.0% |
!!! | TTAACTTTTCTTCAGTTTAA+AGG | + | chr8.3:13476690-13476709 | MS.gene61469:CDS | 20.0% |
! | AAGATGTAATCATGCATATA+TGG | - | chr8.3:13476576-13476595 | None:intergenic | 25.0% |
! | AAGTGTGATATGATACAATT+AGG | - | chr8.3:13476672-13476691 | None:intergenic | 25.0% |
! | AATGAAATAGATTACACAAG+AGG | + | chr8.3:13476537-13476556 | MS.gene61469:intron | 25.0% |
! | ATTACATCTTATGTATGTTG+TGG | + | chr8.3:13476586-13476605 | MS.gene61469:intron | 25.0% |
! | GAATACTTACCTTTATTATG+AGG | + | chr8.3:13475757-13475776 | MS.gene61469:CDS | 25.0% |
! | GTCAAATTTGTCAAATTCAA+AGG | - | chr8.3:13475170-13475189 | None:intergenic | 25.0% |
! | TGAGTTCCAAATGAATTAAA+TGG | - | chr8.3:13476344-13476363 | None:intergenic | 25.0% |
!! | ATTCTGCCATTTAATTCATT+TGG | + | chr8.3:13476335-13476354 | MS.gene61469:CDS | 25.0% |
!!! | TATTCAGATTTTCTAGGATA+GGG | - | chr8.3:13475742-13475761 | None:intergenic | 25.0% |
AAAATACGCCGTTTACAAAA+AGG | - | chr8.3:13475252-13475271 | None:intergenic | 30.0% | |
AAATACGCCGTTTACAAAAA+GGG | - | chr8.3:13475251-13475270 | None:intergenic | 30.0% | |
ATATCACTAACAATAGTCCT+AGG | + | chr8.3:13476178-13476197 | MS.gene61469:intron | 30.0% | |
ATGATACAATTAGGAACACT+TGG | - | chr8.3:13476663-13476682 | None:intergenic | 30.0% | |
ATTAACATGTAGTTCAGTCT+TGG | + | chr8.3:13475602-13475621 | MS.gene61469:intron | 30.0% | |
CAGATGTTCAATAGATACAT+GGG | + | chr8.3:13475348-13475367 | MS.gene61469:CDS | 30.0% | |
CTTCAGTTTAAAGGATATCA+AGG | + | chr8.3:13476699-13476718 | MS.gene61469:CDS | 30.0% | |
GAGCTTGAATAAACATTTGA+AGG | - | chr8.3:13475990-13476009 | None:intergenic | 30.0% | |
GCATATATGGTAATAAATCG+AGG | - | chr8.3:13476563-13476582 | None:intergenic | 30.0% | |
GGACTATTGTTAGTGATATT+AGG | - | chr8.3:13476177-13476196 | None:intergenic | 30.0% | |
TATACCACAATTTACTAAGG+TGG | + | chr8.3:13475637-13475656 | MS.gene61469:CDS | 30.0% | |
TCAACAAATAATAGCTCATC+TGG | - | chr8.3:13476729-13476748 | None:intergenic | 30.0% | |
TCTCATAATTCAAAATGACC+AGG | + | chr8.3:13476428-13476447 | MS.gene61469:CDS | 30.0% | |
TGAATTAAATGGCAGAATTC+TGG | - | chr8.3:13476333-13476352 | None:intergenic | 30.0% | |
TTACAAAAAGGGAAAAGGTT+AGG | - | chr8.3:13475240-13475259 | None:intergenic | 30.0% | |
! | ACCTTTTCCCTTTTTGTAAA+CGG | + | chr8.3:13475241-13475260 | MS.gene61469:CDS | 30.0% |
! | GAGTTCTAATGTTTGTTCAA+TGG | + | chr8.3:13476457-13476476 | MS.gene61469:intron | 30.0% |
! | GGTAAGTATTCAGATTTTCT+AGG | - | chr8.3:13475748-13475767 | None:intergenic | 30.0% |
! | GTTAGTGATATTAGGTATTG+CGG | - | chr8.3:13476169-13476188 | None:intergenic | 30.0% |
! | TTAGTGATATTAGGTATTGC+GGG | - | chr8.3:13476168-13476187 | None:intergenic | 30.0% |
! | TTATATAAAGTGCTAAGGGA+TGG | + | chr8.3:13476840-13476859 | MS.gene61469:CDS | 30.0% |
!! | AGAAAATTTGAGTTGAACCA+CGG | - | chr8.3:13476372-13476391 | None:intergenic | 30.0% |
!!! | GTATTCAGATTTTCTAGGAT+AGG | - | chr8.3:13475743-13475762 | None:intergenic | 30.0% |
AACCTTACCCAAATCAGATT+CGG | + | chr8.3:13475890-13475909 | MS.gene61469:CDS | 35.0% | |
AACGTTTCCGAATCTGATTT+GGG | - | chr8.3:13475900-13475919 | None:intergenic | 35.0% | |
ACATTAGAACTCATCAAACC+TGG | - | chr8.3:13476449-13476468 | None:intergenic | 35.0% | |
ACGCATCTTCTGAATTTGAT+AGG | - | chr8.3:13475290-13475309 | None:intergenic | 35.0% | |
AGTTTCAACTTCTTCAGTGA+TGG | - | chr8.3:13475674-13475693 | None:intergenic | 35.0% | |
ATCCTTTACTCTACTATCCT+AGG | - | chr8.3:13476198-13476217 | None:intergenic | 35.0% | |
ATTTGCAAACTCTTCAACGT+AGG | - | chr8.3:13475806-13475825 | None:intergenic | 35.0% | |
CAAATTTGACGATGATGACA+TGG | + | chr8.3:13475180-13475199 | MS.gene61469:CDS | 35.0% | |
CGCATCTTCTGAATTTGATA+GGG | - | chr8.3:13475289-13475308 | None:intergenic | 35.0% | |
GAAATGAATGCATTCCTTGT+TGG | + | chr8.3:13475713-13475732 | MS.gene61469:CDS | 35.0% | |
GCAGATGTTCAATAGATACA+TGG | + | chr8.3:13475347-13475366 | MS.gene61469:CDS | 35.0% | |
GGGATAAAACATCTATCGTT+GGG | + | chr8.3:13476025-13476044 | MS.gene61469:CDS | 35.0% | |
TAACGTTTCCGAATCTGATT+TGG | - | chr8.3:13475901-13475920 | None:intergenic | 35.0% | |
TGAACCACCTTAGTAAATTG+TGG | - | chr8.3:13475644-13475663 | None:intergenic | 35.0% | |
TGGCGTAATCCTCATAATAA+AGG | - | chr8.3:13475769-13475788 | None:intergenic | 35.0% | |
TGGGATAAAACATCTATCGT+TGG | + | chr8.3:13476024-13476043 | MS.gene61469:CDS | 35.0% | |
TTAGGAAGAGCTTAAATCGT+TGG | - | chr8.3:13475222-13475241 | None:intergenic | 35.0% | |
!! | ATTTCAGCCATTTTCATACC+AGG | - | chr8.3:13475698-13475717 | None:intergenic | 35.0% |
!! | TTTCAGCCATTTTCATACCA+GGG | - | chr8.3:13475697-13475716 | None:intergenic | 35.0% |
AAAGAATGATCACTCGAGGA+AGG | - | chr8.3:13475965-13475984 | None:intergenic | 40.0% | |
AACATGTAGTTCAGTCTTGG+TGG | + | chr8.3:13475605-13475624 | MS.gene61469:intron | 40.0% | |
AGGTTAAGATAGTGAGGACA+AGG | - | chr8.3:13475875-13475894 | None:intergenic | 40.0% | |
CAGCACAAGAACAAGAAGAT+AGG | + | chr8.3:13475005-13475024 | MS.gene61469:CDS | 40.0% | |
CCTCATACTCGATGATATTG+CGG | + | chr8.3:13475408-13475427 | MS.gene61469:CDS | 40.0% | |
CGTAGGTGGGAAACAAATAT+TGG | - | chr8.3:13475789-13475808 | None:intergenic | 40.0% | |
CTCATGTACAAAATCTCTCG+TGG | + | chr8.3:13475312-13475331 | MS.gene61469:CDS | 40.0% | |
CTGGAAAATGTAGATCAGCA+GGG | - | chr8.3:13476314-13476333 | None:intergenic | 40.0% | |
GAAACTCCCTGGTATGAAAA+TGG | + | chr8.3:13475688-13475707 | MS.gene61469:CDS | 40.0% | |
GAATGTCGCACTTCTTACTT+AGG | - | chr8.3:13476812-13476831 | None:intergenic | 40.0% | |
GATGTTGATATCGCTTCTGT+TGG | + | chr8.3:13475827-13475846 | MS.gene61469:CDS | 40.0% | |
GCCGTTTACAAAAAGGGAAA+AGG | - | chr8.3:13475245-13475264 | None:intergenic | 40.0% | |
GTCCTAGGATAGTAGAGTAA+AGG | + | chr8.3:13476193-13476212 | MS.gene61469:intron | 40.0% | |
TCGTTGTTGACAACAAACAG+TGG | + | chr8.3:13476277-13476296 | MS.gene61469:intron | 40.0% | |
TCTGGAAAATGTAGATCAGC+AGG | - | chr8.3:13476315-13476334 | None:intergenic | 40.0% | |
TGGGTAAGGTTAAGATAGTG+AGG | - | chr8.3:13475881-13475900 | None:intergenic | 40.0% | |
TTAAGATAGTGAGGACAAGG+CGG | - | chr8.3:13475872-13475891 | None:intergenic | 40.0% | |
TTCCTCGAGTGATCATTCTT+TGG | + | chr8.3:13475964-13475983 | MS.gene61469:CDS | 40.0% | |
TTGGAAGGAAAGACATGATG+TGG | - | chr8.3:13475060-13475079 | None:intergenic | 40.0% | |
! | ACTTGAATTTGCTTGCCTGA+GGG | - | chr8.3:13475488-13475507 | None:intergenic | 40.0% |
! | ATTTGGAACTCATTCTTCCG+TGG | + | chr8.3:13476352-13476371 | MS.gene61469:CDS | 40.0% |
! | GCTTGTTTCAACAGAGCTTT+TGG | - | chr8.3:13475083-13475102 | None:intergenic | 40.0% |
! | GTTTCAACAGAGCTTTTGGT+TGG | - | chr8.3:13475079-13475098 | None:intergenic | 40.0% |
!! | TTATCCCAGAGAGAGCATTA+AGG | - | chr8.3:13476012-13476031 | None:intergenic | 40.0% |
!! | TTCCGAATCTGATTTGGGTA+AGG | - | chr8.3:13475895-13475914 | None:intergenic | 40.0% |
AAGCTCCTTAATGCTCTCTC+TGG | + | chr8.3:13476004-13476023 | MS.gene61469:CDS | 45.0% | |
AGCTCCTTAATGCTCTCTCT+GGG | + | chr8.3:13476005-13476024 | MS.gene61469:CDS | 45.0% | |
ATCGTTGGTCCATGTCATCT+TGG | - | chr8.3:13475207-13475226 | None:intergenic | 45.0% | |
ATGTGGCTCACTATACAGTC+TGG | - | chr8.3:13475043-13475062 | None:intergenic | 45.0% | |
CAAGCATTCTATCTCGCAGA+TGG | + | chr8.3:13475098-13475117 | MS.gene61469:CDS | 45.0% | |
CCGCAATATCATCGAGTATG+AGG | - | chr8.3:13475411-13475430 | None:intergenic | 45.0% | |
CTGAAGAAGTTGAAACTCCC+TGG | + | chr8.3:13475677-13475696 | MS.gene61469:CDS | 45.0% | |
GACAACAAACAGTGGCTTCT+GGG | + | chr8.3:13476285-13476304 | MS.gene61469:intron | 45.0% | |
GAGATTAGTGCAAGCAGAGA+GGG | - | chr8.3:13475461-13475480 | None:intergenic | 45.0% | |
GCAAACTCTTCAACGTAGGT+GGG | - | chr8.3:13475802-13475821 | None:intergenic | 45.0% | |
TGACAACAAACAGTGGCTTC+TGG | + | chr8.3:13476284-13476303 | MS.gene61469:intron | 45.0% | |
TGACATGGACCAAGATGACA+TGG | + | chr8.3:13475195-13475214 | MS.gene61469:CDS | 45.0% | |
TGCAAACTCTTCAACGTAGG+TGG | - | chr8.3:13475803-13475822 | None:intergenic | 45.0% | |
TGGCAGAGTCGAACTCTAAA+CGG | + | chr8.3:13474975-13474994 | MS.gene61469:CDS | 45.0% | |
TGTGGCTCACTATACAGTCT+GGG | - | chr8.3:13475042-13475061 | None:intergenic | 45.0% | |
! | GACTTGAATTTGCTTGCCTG+AGG | - | chr8.3:13475489-13475508 | None:intergenic | 45.0% |
! | GTTGGGTTGCTCAACAACAA+AGG | + | chr8.3:13476042-13476061 | MS.gene61469:CDS | 45.0% |
!! | CAACAGAGCTTTTGGTTGGA+AGG | - | chr8.3:13475075-13475094 | None:intergenic | 45.0% |
AAGAGTCGCCTTTACCAGGA+TGG | + | chr8.3:13476628-13476647 | MS.gene61469:CDS | 50.0% | |
AGAGTCGCCTTTACCAGGAT+GGG | + | chr8.3:13476629-13476648 | MS.gene61469:CDS | 50.0% | |
ATTAGTGCAAGCAGAGAGGG+CGG | - | chr8.3:13475458-13475477 | None:intergenic | 50.0% | |
CATCATTGGGCATGACCTCA+AGG | + | chr8.3:13475378-13475397 | MS.gene61469:CDS | 50.0% | |
CGAGATTAGTGCAAGCAGAG+AGG | - | chr8.3:13475462-13475481 | None:intergenic | 50.0% | |
CTTGAGGTCATGCCCAATGA+TGG | - | chr8.3:13475380-13475399 | None:intergenic | 50.0% | |
GGCCAAAGAATGATCACTCG+AGG | - | chr8.3:13475969-13475988 | None:intergenic | 50.0% | |
GTATGAGGTCGAGTTCCTTG+AGG | - | chr8.3:13475396-13475415 | None:intergenic | 50.0% | |
ACATGGGTCCGCTCCATCAT+TGG | + | chr8.3:13475364-13475383 | MS.gene61469:CDS | 55.0% | |
CAGGAAGAGTCGCCTTTACC+AGG | + | chr8.3:13476624-13476643 | MS.gene61469:intron | 55.0% | |
CATGGGTCCGCTCCATCATT+GGG | + | chr8.3:13475365-13475384 | MS.gene61469:CDS | 55.0% | |
CTAGGATAGGGCAGCCAACA+AGG | - | chr8.3:13475730-13475749 | None:intergenic | 55.0% | |
CTCGCAGATGGCGCAACATT+TGG | + | chr8.3:13475110-13475129 | MS.gene61469:CDS | 55.0% | |
GCACTAATCTCGTCTCCCTC+AGG | + | chr8.3:13475470-13475489 | MS.gene61469:intron | 55.0% | |
GTGGTGTCTTTCGTCATCGC+AGG | + | chr8.3:13476605-13476624 | MS.gene61469:intron | 55.0% | |
TGTGCAGCCCATCCTGGTAA+AGG | - | chr8.3:13476639-13476658 | None:intergenic | 55.0% | |
! | GGTCATGCCCAATGATGGAG+CGG | - | chr8.3:13475375-13475394 | None:intergenic | 55.0% |
CTTGGTTGTGCAGCCCATCC+TGG | - | chr8.3:13476645-13476664 | None:intergenic | 60.0% | |
AAGCAGAGAGGGCGGTAGGC+AGG | - | chr8.3:13475450-13475469 | None:intergenic | 65.0% | |
GTGCAAGCAGAGAGGGCGGT+AGG | - | chr8.3:13475454-13475473 | None:intergenic | 65.0% | |
CAGAGAGGGCGGTAGGCAGG+TGG | - | chr8.3:13475447-13475466 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 13474974 | 13476887 | 13474974 | ID=MS.gene61469 |
chr8.3 | mRNA | 13474974 | 13476887 | 13474974 | ID=MS.gene61469.t1;Parent=MS.gene61469 |
chr8.3 | exon | 13474974 | 13475429 | 13474974 | ID=MS.gene61469.t1.exon1;Parent=MS.gene61469.t1 |
chr8.3 | CDS | 13474974 | 13475429 | 13474974 | ID=cds.MS.gene61469.t1;Parent=MS.gene61469.t1 |
chr8.3 | exon | 13475614 | 13476063 | 13475614 | ID=MS.gene61469.t1.exon2;Parent=MS.gene61469.t1 |
chr8.3 | CDS | 13475614 | 13476063 | 13475614 | ID=cds.MS.gene61469.t1;Parent=MS.gene61469.t1 |
chr8.3 | exon | 13476297 | 13476449 | 13476297 | ID=MS.gene61469.t1.exon3;Parent=MS.gene61469.t1 |
chr8.3 | CDS | 13476297 | 13476449 | 13476297 | ID=cds.MS.gene61469.t1;Parent=MS.gene61469.t1 |
chr8.3 | exon | 13476627 | 13476887 | 13476627 | ID=MS.gene61469.t1.exon4;Parent=MS.gene61469.t1 |
chr8.3 | CDS | 13476627 | 13476887 | 13476627 | ID=cds.MS.gene61469.t1;Parent=MS.gene61469.t1 |
Gene Sequence |
Protein sequence |