Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63092.t1 | XP_003628590.2 | 73.3 | 424 | 58 | 3 | 1 | 374 | 15 | 433 | 4.60E-164 | 587.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63092.t1 | Q9FM89 | 26.8 | 444 | 213 | 19 | 11 | 369 | 6 | 422 | 7.8e-19 | 96.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63092.t1 | G7LEM1 | 73.3 | 424 | 58 | 3 | 1 | 374 | 15 | 433 | 3.3e-164 | 587.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63092 | MS.gene002112 | PPI |
| MS.gene63092 | MS.gene065373 | PPI |
| MS.gene63092 | MS.gene54959 | PPI |
| MS.gene63092 | MS.gene51795 | PPI |
| MS.gene047137 | MS.gene63092 | PPI |
| MS.gene63092 | MS.gene047136 | PPI |
| MS.gene63092 | MS.gene072000 | PPI |
| MS.gene63092 | MS.gene033695 | PPI |
| MS.gene63092 | MS.gene78164 | PPI |
| MS.gene54960 | MS.gene63092 | PPI |
| MS.gene63092 | MS.gene01653 | PPI |
| MS.gene072003 | MS.gene63092 | PPI |
| MS.gene63092 | MS.gene024262 | PPI |
| MS.gene071257 | MS.gene63092 | PPI |
| MS.gene63092 | MS.gene51793 | PPI |
| MS.gene63092 | MS.gene033694 | PPI |
| MS.gene63092 | MS.gene045772 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63092.t1 | MTR_8g062310 | 73.585 | 424 | 57 | 3 | 1 | 374 | 15 | 433 | 0.0 | 597 |
| MS.gene63092.t1 | MTR_8g070950 | 52.414 | 435 | 126 | 11 | 11 | 374 | 15 | 439 | 1.59e-130 | 381 |
| MS.gene63092.t1 | MTR_8g062010 | 51.049 | 429 | 141 | 8 | 11 | 373 | 9 | 434 | 1.06e-124 | 366 |
| MS.gene63092.t1 | MTR_8g062080 | 48.753 | 441 | 144 | 12 | 1 | 369 | 15 | 445 | 1.53e-116 | 346 |
| MS.gene63092.t1 | MTR_8g469020 | 45.055 | 455 | 154 | 10 | 11 | 374 | 7 | 456 | 4.51e-113 | 337 |
| MS.gene63092.t1 | MTR_8g058965 | 46.389 | 457 | 148 | 12 | 5 | 370 | 7 | 457 | 1.98e-108 | 325 |
| MS.gene63092.t1 | MTR_8g062300 | 44.276 | 463 | 161 | 13 | 6 | 373 | 21 | 481 | 2.34e-102 | 311 |
| MS.gene63092.t1 | MTR_2g086020 | 45.977 | 348 | 150 | 8 | 37 | 374 | 1 | 320 | 1.39e-81 | 252 |
| MS.gene63092.t1 | MTR_4g050250 | 41.748 | 412 | 137 | 11 | 2 | 315 | 14 | 420 | 4.16e-80 | 252 |
| MS.gene63092.t1 | MTR_8g467790 | 43.380 | 355 | 142 | 12 | 10 | 313 | 147 | 493 | 8.20e-68 | 222 |
| MS.gene63092.t1 | MTR_2g083840 | 36.674 | 439 | 196 | 13 | 11 | 369 | 21 | 457 | 1.19e-65 | 215 |
| MS.gene63092.t1 | MTR_8g014160 | 39.848 | 394 | 199 | 12 | 8 | 369 | 38 | 425 | 3.56e-61 | 202 |
| MS.gene63092.t1 | MTR_8g468760 | 37.907 | 430 | 193 | 17 | 1 | 368 | 1 | 418 | 3.05e-60 | 200 |
| MS.gene63092.t1 | MTR_8g468810 | 34.956 | 452 | 200 | 17 | 5 | 369 | 19 | 463 | 4.44e-57 | 193 |
| MS.gene63092.t1 | MTR_8g014260 | 33.941 | 439 | 207 | 14 | 11 | 369 | 16 | 451 | 8.00e-55 | 187 |
| MS.gene63092.t1 | MTR_8g077460 | 37.531 | 397 | 198 | 17 | 1 | 369 | 1 | 375 | 1.23e-53 | 182 |
| MS.gene63092.t1 | MTR_8g468840 | 34.545 | 440 | 198 | 15 | 11 | 366 | 14 | 447 | 4.54e-52 | 179 |
| MS.gene63092.t1 | MTR_8g468810 | 39.583 | 288 | 138 | 11 | 5 | 263 | 19 | 299 | 1.67e-46 | 161 |
| MS.gene63092.t1 | MTR_8g468810 | 39.583 | 288 | 138 | 11 | 5 | 263 | 19 | 299 | 3.00e-46 | 161 |
| MS.gene63092.t1 | MTR_8g468810 | 39.583 | 288 | 138 | 11 | 5 | 263 | 19 | 299 | 6.50e-46 | 160 |
| MS.gene63092.t1 | MTR_8g468810 | 39.583 | 288 | 138 | 11 | 5 | 263 | 19 | 299 | 1.16e-45 | 160 |
| MS.gene63092.t1 | MTR_8g062270 | 35.806 | 391 | 192 | 17 | 10 | 359 | 15 | 387 | 2.72e-45 | 161 |
| MS.gene63092.t1 | MTR_8g062270 | 32.105 | 190 | 103 | 10 | 186 | 368 | 283 | 453 | 1.92e-13 | 71.6 |
| MS.gene63092.t1 | MTR_4g032730 | 39.871 | 311 | 140 | 11 | 5 | 279 | 7 | 306 | 3.56e-41 | 150 |
| MS.gene63092.t1 | MTR_4g032730 | 37.634 | 93 | 56 | 1 | 276 | 368 | 376 | 466 | 6.36e-12 | 67.0 |
| MS.gene63092.t1 | MTR_8g467800 | 40.433 | 277 | 138 | 8 | 11 | 263 | 20 | 293 | 4.98e-41 | 147 |
| MS.gene63092.t1 | MTR_8g445780 | 33.333 | 384 | 178 | 15 | 11 | 322 | 13 | 390 | 1.11e-40 | 148 |
| MS.gene63092.t1 | MTR_8g467800 | 40.433 | 277 | 138 | 8 | 11 | 263 | 20 | 293 | 4.46e-40 | 147 |
| MS.gene63092.t1 | MTR_8g058970 | 37.793 | 299 | 139 | 11 | 10 | 263 | 18 | 314 | 3.07e-39 | 145 |
| MS.gene63092.t1 | MTR_8g058970 | 48.810 | 84 | 39 | 2 | 289 | 369 | 395 | 477 | 3.53e-18 | 86.3 |
| MS.gene63092.t1 | MTR_7g032380 | 32.031 | 384 | 218 | 13 | 1 | 369 | 1 | 356 | 5.51e-37 | 137 |
| MS.gene63092.t1 | MTR_5g092960 | 36.156 | 307 | 156 | 10 | 10 | 279 | 18 | 321 | 1.09e-33 | 129 |
| MS.gene63092.t1 | MTR_5g092960 | 36.770 | 291 | 144 | 10 | 10 | 263 | 18 | 305 | 1.42e-33 | 130 |
| MS.gene63092.t1 | MTR_5g092960 | 38.393 | 112 | 59 | 4 | 257 | 368 | 360 | 461 | 1.69e-15 | 78.2 |
| MS.gene63092.t1 | MTR_5g008950 | 28.385 | 384 | 237 | 14 | 13 | 373 | 1 | 369 | 2.22e-33 | 128 |
| MS.gene63092.t1 | MTR_1g041245 | 30.693 | 404 | 227 | 17 | 1 | 369 | 1 | 386 | 2.91e-33 | 128 |
| MS.gene63092.t1 | MTR_5g021550 | 50.685 | 146 | 58 | 5 | 11 | 144 | 19 | 162 | 3.04e-31 | 116 |
| MS.gene63092.t1 | MTR_7g115270 | 29.873 | 395 | 231 | 12 | 11 | 366 | 12 | 399 | 1.43e-30 | 120 |
| MS.gene63092.t1 | MTR_7g098510 | 30.435 | 391 | 231 | 14 | 7 | 369 | 14 | 391 | 1.79e-29 | 117 |
| MS.gene63092.t1 | MTR_3g467400 | 28.678 | 401 | 210 | 15 | 11 | 370 | 3 | 368 | 2.08e-29 | 117 |
| MS.gene63092.t1 | MTR_3g105060 | 30.130 | 385 | 220 | 16 | 10 | 369 | 13 | 373 | 3.17e-29 | 116 |
| MS.gene63092.t1 | MTR_7g032370 | 30.352 | 369 | 217 | 15 | 23 | 369 | 2 | 352 | 6.04e-28 | 112 |
| MS.gene63092.t1 | MTR_8g014290 | 44.444 | 153 | 65 | 6 | 11 | 145 | 10 | 160 | 9.57e-28 | 107 |
| MS.gene63092.t1 | MTR_3g108150 | 30.829 | 386 | 227 | 12 | 11 | 368 | 13 | 386 | 2.43e-27 | 111 |
| MS.gene63092.t1 | MTR_7g056433 | 29.008 | 393 | 230 | 14 | 11 | 369 | 12 | 389 | 3.72e-27 | 111 |
| MS.gene63092.t1 | MTR_7g033915 | 28.753 | 393 | 226 | 14 | 1 | 368 | 1 | 364 | 3.96e-27 | 110 |
| MS.gene63092.t1 | MTR_3g023630 | 29.921 | 381 | 231 | 12 | 8 | 366 | 5 | 371 | 1.11e-26 | 109 |
| MS.gene63092.t1 | MTR_3g099800 | 59.770 | 87 | 34 | 1 | 281 | 366 | 19 | 105 | 5.77e-26 | 100 |
| MS.gene63092.t1 | MTR_7g033990 | 29.310 | 406 | 215 | 18 | 1 | 363 | 1 | 377 | 2.18e-25 | 106 |
| MS.gene63092.t1 | MTR_1g085120 | 29.073 | 399 | 243 | 13 | 2 | 369 | 82 | 471 | 2.27e-25 | 107 |
| MS.gene63092.t1 | MTR_1g085120 | 29.073 | 399 | 243 | 13 | 2 | 369 | 157 | 546 | 3.08e-25 | 107 |
| MS.gene63092.t1 | MTR_3g036250 | 28.609 | 381 | 225 | 15 | 11 | 366 | 5 | 363 | 7.21e-25 | 104 |
| MS.gene63092.t1 | MTR_6g022500 | 29.744 | 390 | 231 | 18 | 10 | 369 | 100 | 476 | 1.83e-23 | 101 |
| MS.gene63092.t1 | MTR_7g034115 | 28.093 | 388 | 239 | 15 | 1 | 361 | 1 | 375 | 3.52e-23 | 100 |
| MS.gene63092.t1 | MTR_6g011460 | 29.293 | 396 | 235 | 16 | 5 | 369 | 40 | 421 | 3.78e-23 | 100 |
| MS.gene63092.t1 | MTR_7g098570 | 28.906 | 384 | 238 | 14 | 10 | 368 | 19 | 392 | 1.15e-22 | 99.4 |
| MS.gene63092.t1 | MTR_5g073420 | 29.041 | 365 | 219 | 15 | 1 | 341 | 1 | 349 | 2.74e-22 | 97.4 |
| MS.gene63092.t1 | MTR_2g007450 | 27.570 | 428 | 228 | 16 | 4 | 367 | 9 | 418 | 4.74e-22 | 97.1 |
| MS.gene63092.t1 | MTR_3g107160 | 26.980 | 404 | 238 | 15 | 3 | 370 | 2 | 384 | 5.57e-22 | 96.7 |
| MS.gene63092.t1 | MTR_0543s0010 | 28.158 | 380 | 235 | 15 | 11 | 368 | 86 | 449 | 6.43e-22 | 97.1 |
| MS.gene63092.t1 | MTR_1g108820 | 29.114 | 395 | 226 | 19 | 10 | 367 | 7 | 384 | 7.08e-22 | 96.3 |
| MS.gene63092.t1 | MTR_7g114710 | 28.232 | 379 | 227 | 13 | 10 | 369 | 12 | 364 | 7.80e-22 | 95.9 |
| MS.gene63092.t1 | MTR_8g014210 | 42.222 | 135 | 72 | 6 | 235 | 369 | 103 | 231 | 7.94e-22 | 93.2 |
| MS.gene63092.t1 | MTR_3g107100 | 28.117 | 409 | 223 | 19 | 11 | 369 | 11 | 398 | 1.12e-21 | 95.9 |
| MS.gene63092.t1 | MTR_7g056447 | 38.798 | 183 | 102 | 6 | 11 | 189 | 9 | 185 | 1.96e-21 | 93.6 |
| MS.gene63092.t1 | MTR_7g026500 | 27.250 | 400 | 238 | 13 | 11 | 372 | 14 | 398 | 2.01e-21 | 95.1 |
| MS.gene63092.t1 | MTR_4g024710 | 30.108 | 279 | 122 | 10 | 160 | 369 | 73 | 347 | 2.62e-21 | 94.0 |
| MS.gene63092.t1 | MTR_1089s0010 | 28.535 | 389 | 233 | 16 | 10 | 369 | 7 | 379 | 2.73e-21 | 94.7 |
| MS.gene63092.t1 | MTR_7g007080 | 31.486 | 397 | 216 | 23 | 11 | 370 | 4 | 381 | 6.65e-21 | 93.6 |
| MS.gene63092.t1 | MTR_5g045170 | 27.569 | 399 | 242 | 15 | 3 | 368 | 6 | 390 | 2.42e-20 | 92.0 |
| MS.gene63092.t1 | MTR_8g014220 | 36.667 | 180 | 71 | 6 | 11 | 186 | 19 | 159 | 9.86e-20 | 85.5 |
| MS.gene63092.t1 | MTR_6g040270 | 29.367 | 395 | 214 | 21 | 13 | 367 | 10 | 379 | 2.94e-19 | 88.6 |
| MS.gene63092.t1 | MTR_7g034110 | 27.907 | 344 | 188 | 13 | 1 | 327 | 1 | 301 | 3.28e-19 | 88.2 |
| MS.gene63092.t1 | MTR_6g044572 | 27.750 | 400 | 237 | 16 | 10 | 369 | 1 | 388 | 3.96e-19 | 88.6 |
| MS.gene63092.t1 | MTR_5g058000 | 27.792 | 403 | 220 | 16 | 6 | 368 | 3 | 374 | 5.02e-19 | 87.8 |
| MS.gene63092.t1 | MTR_7g056277 | 26.154 | 390 | 235 | 13 | 11 | 368 | 259 | 627 | 5.31e-19 | 89.0 |
| MS.gene63092.t1 | MTR_4g098590 | 28.333 | 360 | 216 | 14 | 13 | 336 | 1 | 354 | 5.39e-19 | 87.8 |
| MS.gene63092.t1 | MTR_3g107120 | 28.429 | 401 | 229 | 17 | 11 | 370 | 9 | 392 | 5.40e-19 | 88.2 |
| MS.gene63092.t1 | MTR_6g044560 | 27.139 | 409 | 246 | 16 | 1 | 369 | 168 | 564 | 1.17e-18 | 87.8 |
| MS.gene63092.t1 | MTR_5g083890 | 27.226 | 393 | 235 | 17 | 11 | 356 | 6 | 394 | 1.41e-18 | 87.4 |
| MS.gene63092.t1 | MTR_4g056020 | 33.019 | 212 | 124 | 5 | 11 | 211 | 9 | 213 | 1.66e-18 | 87.0 |
| MS.gene63092.t1 | MTR_2g007500 | 33.498 | 203 | 98 | 8 | 4 | 192 | 7 | 186 | 2.20e-18 | 85.5 |
| MS.gene63092.t1 | MTR_5g058100 | 26.420 | 405 | 233 | 15 | 5 | 368 | 3 | 383 | 2.36e-18 | 85.9 |
| MS.gene63092.t1 | MTR_7g056287 | 26.154 | 390 | 235 | 13 | 11 | 368 | 3 | 371 | 5.61e-18 | 84.7 |
| MS.gene63092.t1 | MTR_2g007400 | 26.942 | 412 | 230 | 21 | 10 | 369 | 11 | 403 | 5.64e-18 | 85.1 |
| MS.gene63092.t1 | MTR_2g008310 | 28.643 | 398 | 219 | 20 | 10 | 369 | 1 | 371 | 9.31e-18 | 84.3 |
| MS.gene63092.t1 | MTR_4g024720 | 39.024 | 164 | 66 | 7 | 11 | 144 | 17 | 176 | 1.02e-17 | 81.3 |
| MS.gene63092.t1 | MTR_5g008920 | 35.751 | 193 | 115 | 6 | 3 | 192 | 4 | 190 | 1.54e-17 | 83.6 |
| MS.gene63092.t1 | MTR_8g085430 | 34.742 | 213 | 104 | 10 | 1 | 192 | 1 | 199 | 1.57e-17 | 83.2 |
| MS.gene63092.t1 | MTR_7g088260 | 27.470 | 415 | 214 | 18 | 5 | 369 | 85 | 462 | 2.01e-17 | 84.0 |
| MS.gene63092.t1 | MTR_8g014230 | 45.238 | 84 | 44 | 2 | 279 | 362 | 17 | 98 | 2.32e-17 | 77.4 |
| MS.gene63092.t1 | MTR_3g040700 | 26.409 | 337 | 216 | 15 | 11 | 328 | 43 | 366 | 4.02e-17 | 82.8 |
| MS.gene63092.t1 | MTR_3g082890 | 27.295 | 414 | 220 | 19 | 11 | 369 | 97 | 484 | 4.45e-17 | 82.8 |
| MS.gene63092.t1 | MTR_7g007340 | 29.223 | 373 | 212 | 15 | 10 | 363 | 12 | 351 | 4.87e-17 | 82.0 |
| MS.gene63092.t1 | MTR_0492s0020 | 27.299 | 348 | 215 | 15 | 11 | 336 | 86 | 417 | 9.32e-17 | 81.6 |
| MS.gene63092.t1 | MTR_1g053025 | 27.114 | 402 | 232 | 18 | 10 | 366 | 1 | 386 | 1.70e-16 | 80.5 |
| MS.gene63092.t1 | MTR_4g056030 | 32.394 | 213 | 124 | 7 | 11 | 211 | 9 | 213 | 1.87e-16 | 80.9 |
| MS.gene63092.t1 | MTR_4g039440 | 28.133 | 391 | 239 | 16 | 10 | 369 | 33 | 412 | 2.29e-16 | 80.5 |
| MS.gene63092.t1 | MTR_5g039490 | 23.438 | 384 | 246 | 11 | 10 | 370 | 19 | 377 | 3.47e-16 | 79.7 |
| MS.gene63092.t1 | MTR_3g108560 | 34.409 | 186 | 106 | 6 | 11 | 192 | 20 | 193 | 1.12e-15 | 77.4 |
| MS.gene63092.t1 | MTR_2g008320 | 25.971 | 412 | 232 | 19 | 4 | 370 | 45 | 428 | 1.37e-15 | 78.2 |
| MS.gene63092.t1 | MTR_2g007360 | 27.000 | 400 | 212 | 16 | 10 | 367 | 11 | 372 | 1.50e-15 | 77.8 |
| MS.gene63092.t1 | MTR_3g108560 | 34.409 | 186 | 106 | 6 | 11 | 192 | 20 | 193 | 1.52e-15 | 77.8 |
| MS.gene63092.t1 | MTR_3g095600 | 25.208 | 361 | 187 | 12 | 10 | 359 | 3 | 291 | 4.02e-15 | 75.5 |
| MS.gene63092.t1 | MTR_2g005990 | 27.047 | 403 | 235 | 19 | 10 | 367 | 5 | 393 | 4.17e-15 | 76.6 |
| MS.gene63092.t1 | MTR_1g038710 | 33.838 | 198 | 105 | 8 | 11 | 191 | 19 | 207 | 6.00e-15 | 76.3 |
| MS.gene63092.t1 | MTR_5g087940 | 32.673 | 202 | 104 | 6 | 11 | 211 | 26 | 196 | 2.86e-14 | 73.9 |
| MS.gene63092.t1 | MTR_7g056420 | 33.696 | 184 | 88 | 8 | 11 | 191 | 9 | 161 | 3.35e-14 | 74.7 |
| MS.gene63092.t1 | MTR_7g056430 | 33.696 | 184 | 88 | 8 | 11 | 191 | 9 | 161 | 3.42e-14 | 74.7 |
| MS.gene63092.t1 | MTR_2g100590 | 31.718 | 227 | 128 | 10 | 10 | 217 | 41 | 259 | 4.75e-14 | 73.6 |
| MS.gene63092.t1 | MTR_2g100590 | 31.718 | 227 | 128 | 10 | 10 | 217 | 41 | 259 | 5.45e-14 | 73.2 |
| MS.gene63092.t1 | MTR_2g100590 | 31.718 | 227 | 128 | 10 | 10 | 217 | 41 | 259 | 5.95e-14 | 73.6 |
| MS.gene63092.t1 | MTR_5g065100 | 27.513 | 378 | 234 | 17 | 1 | 368 | 1 | 348 | 9.15e-14 | 72.8 |
| MS.gene63092.t1 | MTR_4g024745 | 45.333 | 75 | 39 | 2 | 278 | 352 | 212 | 284 | 1.50e-13 | 70.9 |
| MS.gene63092.t1 | MTR_6g018660 | 35.196 | 179 | 100 | 7 | 5 | 170 | 14 | 189 | 1.60e-13 | 71.6 |
| MS.gene63092.t1 | MTR_7g084080 | 31.336 | 217 | 113 | 8 | 4 | 212 | 10 | 198 | 2.46e-13 | 70.1 |
| MS.gene63092.t1 | MTR_1g108820 | 32.447 | 188 | 111 | 7 | 10 | 191 | 7 | 184 | 3.18e-13 | 70.5 |
| MS.gene63092.t1 | MTR_5g061680 | 34.483 | 203 | 117 | 10 | 1 | 194 | 1 | 196 | 3.18e-13 | 70.5 |
| MS.gene63092.t1 | MTR_3g463830 | 33.728 | 169 | 98 | 6 | 9 | 170 | 61 | 222 | 6.32e-13 | 69.7 |
| MS.gene63092.t1 | MTR_4g024770 | 62.500 | 48 | 17 | 1 | 11 | 58 | 24 | 70 | 7.80e-13 | 63.9 |
| MS.gene63092.t1 | MTR_1g077420 | 32.461 | 191 | 114 | 8 | 11 | 193 | 4 | 187 | 1.47e-12 | 67.8 |
| MS.gene63092.t1 | MTR_4g134150 | 34.225 | 187 | 105 | 9 | 11 | 192 | 14 | 187 | 2.18e-12 | 66.6 |
| MS.gene63092.t1 | MTR_3g115430 | 41.250 | 80 | 42 | 2 | 290 | 369 | 51 | 125 | 2.41e-12 | 63.9 |
| MS.gene63092.t1 | MTR_1g066830 | 32.161 | 199 | 109 | 8 | 6 | 191 | 3 | 188 | 2.47e-12 | 68.2 |
| MS.gene63092.t1 | MTR_5g084070 | 31.183 | 186 | 116 | 6 | 9 | 191 | 11 | 187 | 3.04e-12 | 68.2 |
| MS.gene63092.t1 | MTR_7g033945 | 34.615 | 182 | 96 | 7 | 1 | 170 | 1 | 171 | 3.08e-12 | 65.1 |
| MS.gene63092.t1 | MTR_6g088705 | 31.280 | 211 | 110 | 10 | 11 | 211 | 19 | 204 | 4.24e-12 | 65.9 |
| MS.gene63092.t1 | MTR_7g033940 | 51.515 | 66 | 31 | 1 | 13 | 78 | 96 | 160 | 4.96e-12 | 65.5 |
| MS.gene63092.t1 | MTR_6g018570 | 29.680 | 219 | 114 | 8 | 5 | 212 | 28 | 217 | 5.84e-12 | 67.0 |
| MS.gene63092.t1 | MTR_1g095750 | 40.964 | 83 | 47 | 2 | 10 | 91 | 45 | 126 | 6.65e-12 | 63.2 |
| MS.gene63092.t1 | MTR_6g018560 | 29.954 | 217 | 116 | 7 | 5 | 212 | 28 | 217 | 8.06e-12 | 66.6 |
| MS.gene63092.t1 | MTR_3g087260 | 29.242 | 277 | 147 | 13 | 11 | 263 | 12 | 263 | 1.14e-11 | 66.2 |
| MS.gene63092.t1 | MTR_5g080710 | 30.890 | 191 | 116 | 7 | 9 | 191 | 31 | 213 | 1.38e-11 | 65.9 |
| MS.gene63092.t1 | MTR_4g092430 | 31.818 | 198 | 111 | 9 | 11 | 193 | 43 | 231 | 1.77e-11 | 65.9 |
| MS.gene63092.t1 | MTR_3g109982 | 32.796 | 186 | 113 | 5 | 11 | 192 | 13 | 190 | 1.78e-11 | 66.2 |
| MS.gene63092.t1 | MTR_4g092430 | 31.818 | 198 | 111 | 9 | 11 | 193 | 43 | 231 | 2.00e-11 | 65.5 |
| MS.gene63092.t1 | MTR_8g014180 | 68.889 | 45 | 12 | 2 | 11 | 55 | 17 | 59 | 2.13e-11 | 59.3 |
| MS.gene63092.t1 | MTR_2g100570 | 28.502 | 207 | 124 | 7 | 10 | 199 | 71 | 270 | 3.36e-11 | 64.7 |
| MS.gene63092.t1 | MTR_4g092440 | 32.000 | 200 | 114 | 9 | 11 | 195 | 32 | 224 | 3.89e-11 | 64.7 |
| MS.gene63092.t1 | MTR_2g100570 | 28.502 | 207 | 124 | 7 | 10 | 199 | 71 | 270 | 4.35e-11 | 64.7 |
| MS.gene63092.t1 | MTR_2g100570 | 28.502 | 207 | 124 | 7 | 10 | 199 | 71 | 270 | 5.47e-11 | 64.3 |
| MS.gene63092.t1 | MTR_4g092440 | 32.000 | 200 | 114 | 9 | 11 | 195 | 32 | 224 | 5.63e-11 | 64.3 |
| MS.gene63092.t1 | MTR_4g093690 | 26.515 | 264 | 158 | 12 | 11 | 256 | 18 | 263 | 6.93e-11 | 62.8 |
| MS.gene63092.t1 | MTR_6g025160 | 27.184 | 206 | 115 | 6 | 11 | 211 | 101 | 276 | 7.12e-11 | 63.5 |
| MS.gene63092.t1 | MTR_4g051640 | 44.286 | 70 | 38 | 1 | 11 | 80 | 30 | 98 | 8.14e-11 | 60.5 |
| MS.gene63092.t1 | MTR_7g098590 | 39.560 | 91 | 51 | 2 | 5 | 95 | 12 | 98 | 9.73e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63092.t1 | AT4G10400 | 28.469 | 418 | 230 | 15 | 10 | 368 | 1 | 408 | 1.91e-24 | 103 |
| MS.gene63092.t1 | AT4G10400 | 28.469 | 418 | 230 | 15 | 10 | 368 | 1 | 408 | 1.91e-24 | 103 |
| MS.gene63092.t1 | AT4G10400 | 28.469 | 418 | 230 | 15 | 10 | 368 | 1 | 408 | 1.91e-24 | 103 |
| MS.gene63092.t1 | AT5G56420 | 25.951 | 447 | 213 | 18 | 11 | 369 | 6 | 422 | 1.89e-21 | 95.5 |
| MS.gene63092.t1 | AT5G56420 | 25.951 | 447 | 213 | 18 | 11 | 369 | 6 | 422 | 1.89e-21 | 95.5 |
| MS.gene63092.t1 | AT5G56420 | 25.951 | 447 | 213 | 18 | 11 | 369 | 6 | 422 | 1.89e-21 | 95.5 |
| MS.gene63092.t1 | AT5G38590 | 27.007 | 411 | 224 | 14 | 10 | 354 | 1 | 401 | 5.42e-21 | 94.0 |
| MS.gene63092.t1 | AT1G78750 | 25.551 | 454 | 238 | 21 | 4 | 366 | 11 | 455 | 2.36e-20 | 92.4 |
| MS.gene63092.t1 | AT1G78750 | 25.551 | 454 | 238 | 21 | 4 | 366 | 11 | 455 | 2.36e-20 | 92.4 |
| MS.gene63092.t1 | AT1G16930 | 35.814 | 215 | 105 | 12 | 11 | 205 | 15 | 216 | 1.60e-19 | 90.1 |
| MS.gene63092.t1 | AT1G16930 | 35.814 | 215 | 105 | 12 | 11 | 205 | 15 | 216 | 1.60e-19 | 90.1 |
| MS.gene63092.t1 | AT1G16930 | 35.814 | 215 | 105 | 12 | 11 | 205 | 15 | 216 | 1.60e-19 | 90.1 |
| MS.gene63092.t1 | AT3G59200 | 30.620 | 258 | 139 | 11 | 11 | 239 | 7 | 253 | 1.16e-18 | 86.7 |
| MS.gene63092.t1 | AT4G09920 | 35.450 | 189 | 108 | 7 | 10 | 191 | 1 | 182 | 2.65e-18 | 84.7 |
| MS.gene63092.t1 | AT4G09920 | 35.450 | 189 | 108 | 7 | 10 | 191 | 1 | 182 | 2.65e-18 | 84.7 |
| MS.gene63092.t1 | AT4G09920 | 35.450 | 189 | 108 | 7 | 10 | 191 | 1 | 182 | 2.65e-18 | 84.7 |
| MS.gene63092.t1 | AT4G09920 | 35.450 | 189 | 108 | 7 | 10 | 191 | 1 | 182 | 2.75e-18 | 85.1 |
| MS.gene63092.t1 | AT4G09920 | 35.450 | 189 | 108 | 7 | 10 | 191 | 1 | 182 | 2.75e-18 | 85.1 |
| MS.gene63092.t1 | AT3G59200 | 30.620 | 258 | 139 | 11 | 11 | 239 | 7 | 253 | 4.09e-18 | 86.3 |
| MS.gene63092.t1 | AT3G60040 | 31.250 | 224 | 128 | 7 | 11 | 211 | 13 | 233 | 9.13e-18 | 85.5 |
| MS.gene63092.t1 | AT4G26340 | 26.267 | 434 | 231 | 17 | 10 | 369 | 1 | 419 | 9.87e-18 | 84.7 |
| MS.gene63092.t1 | AT3G60040 | 31.250 | 224 | 128 | 7 | 11 | 211 | 233 | 453 | 1.04e-17 | 85.5 |
| MS.gene63092.t1 | AT3G60040 | 31.250 | 224 | 128 | 7 | 11 | 211 | 232 | 452 | 1.06e-17 | 85.5 |
| MS.gene63092.t1 | AT3G60040 | 31.250 | 224 | 128 | 7 | 11 | 211 | 230 | 450 | 1.14e-17 | 85.1 |
| MS.gene63092.t1 | AT3G60040 | 31.250 | 224 | 128 | 7 | 11 | 211 | 232 | 452 | 1.15e-17 | 85.1 |
| MS.gene63092.t1 | AT1G69630 | 31.980 | 197 | 120 | 7 | 4 | 193 | 11 | 200 | 1.66e-17 | 84.0 |
| MS.gene63092.t1 | AT5G38590 | 28.832 | 274 | 161 | 9 | 10 | 258 | 1 | 265 | 2.88e-17 | 81.6 |
| MS.gene63092.t1 | AT4G14103 | 30.855 | 269 | 141 | 14 | 11 | 246 | 8 | 264 | 7.22e-16 | 79.0 |
| MS.gene63092.t1 | AT4G13965 | 25.761 | 427 | 240 | 17 | 6 | 366 | 5 | 420 | 8.89e-16 | 78.6 |
| MS.gene63092.t1 | AT1G78760 | 28.384 | 229 | 141 | 10 | 11 | 226 | 16 | 234 | 9.37e-16 | 79.0 |
| MS.gene63092.t1 | AT4G14103 | 30.855 | 269 | 141 | 14 | 11 | 246 | 8 | 264 | 1.52e-15 | 77.8 |
| MS.gene63092.t1 | AT4G14103 | 30.855 | 269 | 141 | 14 | 11 | 246 | 8 | 264 | 1.52e-15 | 77.8 |
| MS.gene63092.t1 | AT5G22670 | 30.303 | 198 | 124 | 6 | 1 | 193 | 1 | 189 | 6.61e-15 | 76.3 |
| MS.gene63092.t1 | AT3G59190 | 31.658 | 199 | 109 | 9 | 11 | 191 | 12 | 201 | 8.27e-15 | 75.5 |
| MS.gene63092.t1 | AT3G59190 | 31.658 | 199 | 109 | 9 | 11 | 191 | 12 | 201 | 8.76e-15 | 76.3 |
| MS.gene63092.t1 | AT5G44940 | 27.981 | 411 | 206 | 18 | 11 | 369 | 5 | 377 | 1.36e-14 | 74.7 |
| MS.gene63092.t1 | AT2G26860 | 32.653 | 196 | 114 | 7 | 10 | 194 | 1 | 189 | 1.85e-14 | 74.7 |
| MS.gene63092.t1 | AT2G26860 | 32.653 | 196 | 114 | 7 | 10 | 194 | 1 | 189 | 1.85e-14 | 74.7 |
| MS.gene63092.t1 | AT2G26030 | 33.679 | 193 | 101 | 9 | 11 | 190 | 4 | 182 | 3.90e-14 | 73.9 |
| MS.gene63092.t1 | AT2G26030 | 33.679 | 193 | 101 | 9 | 11 | 190 | 4 | 182 | 3.90e-14 | 73.9 |
| MS.gene63092.t1 | AT2G26030 | 33.679 | 193 | 101 | 9 | 11 | 190 | 4 | 182 | 4.29e-14 | 73.6 |
| MS.gene63092.t1 | AT3G44060 | 33.508 | 191 | 107 | 8 | 16 | 194 | 4 | 186 | 5.20e-14 | 73.6 |
| MS.gene63092.t1 | AT5G56370 | 26.185 | 443 | 220 | 22 | 10 | 368 | 1 | 420 | 5.74e-14 | 73.2 |
| MS.gene63092.t1 | AT5G56370 | 26.185 | 443 | 220 | 22 | 10 | 368 | 1 | 420 | 5.74e-14 | 73.2 |
| MS.gene63092.t1 | AT5G50270 | 25.995 | 427 | 212 | 18 | 10 | 351 | 1 | 408 | 8.02e-14 | 72.8 |
| MS.gene63092.t1 | AT5G22700 | 32.836 | 201 | 106 | 9 | 4 | 193 | 39 | 221 | 1.44e-13 | 72.0 |
| MS.gene63092.t1 | AT5G22700 | 32.990 | 194 | 104 | 8 | 11 | 193 | 6 | 184 | 1.45e-13 | 72.0 |
| MS.gene63092.t1 | AT5G22700 | 32.990 | 194 | 104 | 8 | 11 | 193 | 6 | 184 | 1.45e-13 | 72.0 |
| MS.gene63092.t1 | AT5G22700 | 32.990 | 194 | 104 | 8 | 11 | 193 | 6 | 184 | 1.45e-13 | 72.0 |
| MS.gene63092.t1 | AT5G22700 | 32.990 | 194 | 104 | 8 | 11 | 193 | 6 | 184 | 1.45e-13 | 72.0 |
| MS.gene63092.t1 | AT5G22700 | 32.990 | 194 | 104 | 8 | 11 | 193 | 43 | 221 | 1.55e-13 | 72.0 |
| MS.gene63092.t1 | AT1G48400 | 30.693 | 202 | 115 | 9 | 11 | 198 | 10 | 200 | 2.61e-13 | 71.6 |
| MS.gene63092.t1 | AT3G59170 | 28.525 | 305 | 137 | 18 | 11 | 247 | 7 | 298 | 2.70e-13 | 71.2 |
| MS.gene63092.t1 | AT1G48400 | 30.693 | 202 | 115 | 9 | 11 | 198 | 10 | 200 | 2.89e-13 | 71.2 |
| MS.gene63092.t1 | AT1G80470 | 32.308 | 195 | 122 | 9 | 8 | 197 | 12 | 201 | 3.17e-13 | 71.2 |
| MS.gene63092.t1 | AT3G49150 | 32.727 | 220 | 122 | 11 | 11 | 213 | 16 | 226 | 8.79e-13 | 69.7 |
| MS.gene63092.t1 | AT5G60610 | 34.146 | 205 | 112 | 10 | 10 | 205 | 1 | 191 | 1.19e-12 | 68.9 |
| MS.gene63092.t1 | AT5G60610 | 34.146 | 205 | 112 | 10 | 10 | 205 | 1 | 191 | 1.19e-12 | 68.9 |
| MS.gene63092.t1 | AT5G44950 | 31.088 | 193 | 112 | 9 | 11 | 193 | 4 | 185 | 3.70e-12 | 67.8 |
| MS.gene63092.t1 | AT3G26922 | 27.586 | 261 | 141 | 11 | 5 | 256 | 7 | 228 | 5.36e-12 | 66.2 |
| MS.gene63092.t1 | AT1G21990 | 31.602 | 231 | 131 | 9 | 11 | 225 | 9 | 228 | 6.76e-12 | 67.0 |
| MS.gene63092.t1 | AT3G49040 | 28.731 | 268 | 142 | 12 | 11 | 256 | 17 | 257 | 6.86e-12 | 66.2 |
| MS.gene63092.t1 | AT5G22660 | 31.633 | 196 | 104 | 8 | 11 | 193 | 13 | 191 | 7.19e-12 | 66.2 |
| MS.gene63092.t1 | AT4G22280 | 29.630 | 243 | 141 | 9 | 10 | 240 | 1 | 225 | 8.91e-12 | 66.2 |
| MS.gene63092.t1 | AT5G53840 | 28.205 | 195 | 125 | 7 | 4 | 193 | 11 | 195 | 8.92e-12 | 66.6 |
| MS.gene63092.t1 | AT4G22280 | 29.630 | 243 | 141 | 9 | 10 | 240 | 1 | 225 | 1.22e-11 | 66.2 |
| MS.gene63092.t1 | AT5G56440 | 33.846 | 195 | 103 | 9 | 10 | 191 | 1 | 182 | 1.32e-11 | 66.2 |
| MS.gene63092.t1 | AT2G29930 | 31.720 | 186 | 113 | 7 | 11 | 191 | 12 | 188 | 2.76e-11 | 65.1 |
| MS.gene63092.t1 | AT2G29930 | 31.720 | 186 | 113 | 7 | 11 | 191 | 12 | 188 | 2.76e-11 | 65.1 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 2.80e-11 | 64.3 |
| MS.gene63092.t1 | AT1G78730 | 23.095 | 420 | 239 | 21 | 9 | 366 | 20 | 417 | 3.48e-11 | 64.7 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 3.95e-11 | 64.3 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 3.95e-11 | 64.3 |
| MS.gene63092.t1 | AT3G59230 | 28.866 | 291 | 151 | 14 | 11 | 258 | 12 | 289 | 4.34e-11 | 64.7 |
| MS.gene63092.t1 | AT5G56370 | 31.227 | 269 | 133 | 15 | 10 | 246 | 1 | 249 | 4.36e-11 | 63.9 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 4.38e-11 | 64.3 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 4.38e-11 | 64.3 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 4.38e-11 | 64.3 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 12 | 202 | 4.38e-11 | 64.3 |
| MS.gene63092.t1 | AT1G52650 | 29.353 | 201 | 119 | 7 | 10 | 196 | 1 | 192 | 4.57e-11 | 64.3 |
| MS.gene63092.t1 | AT1G06630 | 27.835 | 194 | 124 | 6 | 11 | 191 | 21 | 211 | 4.92e-11 | 64.3 |
| MS.gene63092.t1 | AT1G06630 | 28.241 | 216 | 136 | 8 | 11 | 211 | 12 | 223 | 6.23e-11 | 63.9 |
| MS.gene63092.t1 | AT1G66320 | 24.332 | 337 | 217 | 15 | 5 | 312 | 23 | 350 | 6.56e-11 | 63.9 |
| MS.gene63092.t1 | AT4G13985 | 25.962 | 208 | 132 | 9 | 1 | 193 | 9 | 209 | 6.71e-11 | 63.9 |
| MS.gene63092.t1 | AT3G52680 | 32.000 | 225 | 120 | 9 | 11 | 217 | 21 | 230 | 8.22e-11 | 63.2 |
| MS.gene63092.t1 | AT1G32375 | 29.851 | 201 | 109 | 9 | 10 | 193 | 1 | 186 | 9.08e-11 | 63.5 |
| MS.gene63092.t1 | AT1G32375 | 29.851 | 201 | 109 | 9 | 10 | 193 | 1 | 186 | 9.08e-11 | 63.5 |
| MS.gene63092.t1 | AT5G41840 | 29.384 | 211 | 113 | 10 | 7 | 191 | 10 | 210 | 9.44e-11 | 63.5 |
Find 91 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGAGCCGTTTGTCTTCT+AGG | 0.157954 | 8.1:-42888370 | MS.gene63092:CDS |
| TTTGCGTAACGGACTTGTTT+TGG | 0.287410 | 8.1:-42887009 | MS.gene63092:CDS |
| CTGCCCCAAGCTCGAAGATT+TGG | 0.293891 | 8.1:-42887785 | MS.gene63092:CDS |
| TTTGAAGGTGATTGAGAATA+GGG | 0.309567 | 8.1:+42887569 | None:intergenic |
| GGCTACACATTGGGCATTGC+AGG | 0.327474 | 8.1:-42887658 | MS.gene63092:CDS |
| CTGAAGTATATTTGCATAGA+AGG | 0.331495 | 8.1:-42887074 | MS.gene63092:CDS |
| GTGTTCTGCTTCCACGATCT+TGG | 0.332447 | 8.1:-42888320 | MS.gene63092:CDS |
| CATCTTGGTGGCTACACATT+GGG | 0.346345 | 8.1:-42887667 | MS.gene63092:CDS |
| CATCAAATTCATAGATGAAA+TGG | 0.346428 | 8.1:+42888219 | None:intergenic |
| AACAAATTCACTTTGACAAT+AGG | 0.350640 | 8.1:+42887594 | None:intergenic |
| CCACCTCTGGAAAGATCTTC+AGG | 0.351277 | 8.1:-42888342 | MS.gene63092:CDS |
| ATCTCCAAATCTTCGAGCTT+GGG | 0.358832 | 8.1:+42887781 | None:intergenic |
| TGCAGGCAACTTTCCCACTA+TGG | 0.361052 | 8.1:-42887641 | MS.gene63092:CDS |
| CTTCTAGGTGGCGCCACCTC+TGG | 0.361912 | 8.1:-42888355 | MS.gene63092:CDS |
| TGGAAACTTTGCAGTCTATC+TGG | 0.377861 | 8.1:-42887916 | MS.gene63092:intron |
| ATCTGGTGGTAAATACAATA+TGG | 0.383544 | 8.1:-42887899 | MS.gene63092:CDS |
| ATCTTCGAGCTTGGGGCAGC+CGG | 0.383876 | 8.1:+42887789 | None:intergenic |
| CTTCTATGCAAATATACTTC+AGG | 0.390562 | 8.1:+42887075 | None:intergenic |
| GCTTGGACTTACCTTCATCT+TGG | 0.407476 | 8.1:-42887682 | MS.gene63092:CDS |
| TCCGTTACGCAAAATATATT+CGG | 0.420752 | 8.1:+42887019 | None:intergenic |
| CTTGGGGCAGCCGGAGAGAA+AGG | 0.421545 | 8.1:+42887798 | None:intergenic |
| GACGCAGACGGGTCTCCTTA+AGG | 0.422348 | 8.1:-42886876 | None:intergenic |
| AAGAAATGCTTCCGCCATAG+TGG | 0.431234 | 8.1:+42887627 | None:intergenic |
| TTGCAACAGACGTTCTTGTT+GGG | 0.455034 | 8.1:+42888393 | None:intergenic |
| TCAATAGTTGCCTTTCTCTC+CGG | 0.462166 | 8.1:-42887808 | MS.gene63092:CDS |
| AATCTCCAAATCTTCGAGCT+TGG | 0.468488 | 8.1:+42887780 | None:intergenic |
| AACTTAACTTTGACGCAGAC+GGG | 0.482850 | 8.1:-42886887 | MS.gene63092:CDS |
| GAGATCAAGTTCTTCAAGGC+GGG | 0.483714 | 8.1:+42888136 | None:intergenic |
| TGGACTTACCTTCATCTTGG+TGG | 0.487659 | 8.1:-42887679 | MS.gene63092:CDS |
| GTATTTCAACCTCTTGAAGC+TGG | 0.488329 | 8.1:+42887720 | None:intergenic |
| AGGTGGGATATGAGACATCT+AGG | 0.488525 | 8.1:+42887095 | None:intergenic |
| GTTGCAACAGACGTTCTTGT+TGG | 0.488706 | 8.1:+42888392 | None:intergenic |
| TTGTGTGGATGGAATCAGTT+TGG | 0.490640 | 8.1:-42887755 | MS.gene63092:CDS |
| ATTTGCATAGAAGGATATCA+AGG | 0.494802 | 8.1:-42887065 | MS.gene63092:CDS |
| AAGTCGAATGTATTGAAATG+TGG | 0.501176 | 8.1:-42888178 | MS.gene63092:CDS |
| GAATGTGGCGCGATCTGCGG+AGG | 0.501492 | 8.1:+42888249 | None:intergenic |
| ACACCAATGATAATTTCGCT+TGG | 0.513716 | 8.1:-42887699 | MS.gene63092:CDS |
| TTGGAGATTTATTGTGTGGA+TGG | 0.515453 | 8.1:-42887766 | MS.gene63092:CDS |
| CAACTTAACTTTGACGCAGA+CGG | 0.518393 | 8.1:-42886888 | MS.gene63092:CDS |
| TGATGAGATCAAGTTCTTCA+AGG | 0.519787 | 8.1:+42888132 | None:intergenic |
| GGCGCCACCTAGAAGACAAA+CGG | 0.523348 | 8.1:+42888363 | None:intergenic |
| AGTCCAAGCGAAATTATCAT+TGG | 0.524718 | 8.1:+42887696 | None:intergenic |
| GACTACTTATTCTGTCGATG+TGG | 0.529175 | 8.1:+42888453 | None:intergenic |
| CGTCTGCGTCAAAGTTAAGT+TGG | 0.530509 | 8.1:+42886889 | None:intergenic |
| GCATGCATGGCGACTACGAA+TGG | 0.531190 | 8.1:-42888482 | None:intergenic |
| AGACGTTCTTGTTGGGAGGA+AGG | 0.532307 | 8.1:+42888400 | None:intergenic |
| GCAACAACCTCGTTTCCCTC+AGG | 0.532637 | 8.1:-42888064 | MS.gene63092:intron |
| TCATCTTGGTGGCTACACAT+TGG | 0.533164 | 8.1:-42887668 | MS.gene63092:CDS |
| ATGTGGGTCCGTTCTGCCAT+TGG | 0.540518 | 8.1:-42888161 | MS.gene63092:CDS |
| ATATGACACAGAACTGAATC+CGG | 0.542257 | 8.1:+42888428 | None:intergenic |
| CTAGGAACAGTTGTTGATTG+TGG | 0.543151 | 8.1:+42887113 | None:intergenic |
| GTTGTTGCAGCTCATGAAGA+AGG | 0.544005 | 8.1:+42888079 | None:intergenic |
| CTATGCAAATATACTTCAGG+TGG | 0.545118 | 8.1:+42887078 | None:intergenic |
| ATGTGTAGCCACCAAGATGA+AGG | 0.546460 | 8.1:+42887671 | None:intergenic |
| TCCCATGTTCGTAAAGATGA+TGG | 0.547163 | 8.1:+42887137 | None:intergenic |
| TCTCCAAATCTTCGAGCTTG+GGG | 0.548834 | 8.1:+42887782 | None:intergenic |
| AGATACAACTTCTTCAGTGA+TGG | 0.549162 | 8.1:+42887850 | None:intergenic |
| AACCATCATCTTTACGAACA+TGG | 0.549310 | 8.1:-42887139 | MS.gene63092:CDS |
| CGACAGAATAAGTAGTCTAC+CGG | 0.557714 | 8.1:-42888447 | MS.gene63092:CDS |
| CCTAGAAGACAAACGGCTCA+TGG | 0.560672 | 8.1:+42888370 | None:intergenic |
| AAGCTTTCTCCAGCTTCAAG+AGG | 0.569171 | 8.1:-42887729 | MS.gene63092:CDS |
| AGTCGAATGTATTGAAATGT+GGG | 0.575102 | 8.1:-42888177 | MS.gene63092:CDS |
| ACCATCATCTTTACGAACAT+GGG | 0.576385 | 8.1:-42887138 | MS.gene63092:CDS |
| AGAAATGCTTCCGCCATAGT+GGG | 0.576983 | 8.1:+42887628 | None:intergenic |
| CAACAGACGTTCTTGTTGGG+AGG | 0.577111 | 8.1:+42888396 | None:intergenic |
| AGATCAAGTTCTTCAAGGCG+GGG | 0.579251 | 8.1:+42888137 | None:intergenic |
| AAGATTAACAAATATACCGA+GGG | 0.582923 | 8.1:-42886925 | MS.gene63092:CDS |
| CAGCTCATGAAGAAGGAAGG+AGG | 0.585175 | 8.1:+42888086 | None:intergenic |
| GTCACGTCATTCAACATCAA+AGG | 0.588332 | 8.1:-42887521 | MS.gene63092:intron |
| AGCTCATGAAGAAGGAAGGA+GGG | 0.594219 | 8.1:+42888087 | None:intergenic |
| GATCAAGTTCTTCAAGGCGG+GGG | 0.597189 | 8.1:+42888138 | None:intergenic |
| TTTGAATGTGGCGCGATCTG+CGG | 0.599793 | 8.1:+42888246 | None:intergenic |
| ACTACTTATTCTGTCGATGT+GGG | 0.610730 | 8.1:+42888454 | None:intergenic |
| TTGCAGCTCATGAAGAAGGA+AGG | 0.613912 | 8.1:+42888083 | None:intergenic |
| CCTGAAGATCTTTCCAGAGG+TGG | 0.623862 | 8.1:+42888342 | None:intergenic |
| AGATTTGGAGATTTATTGTG+TGG | 0.626661 | 8.1:-42887770 | MS.gene63092:CDS |
| AATGTGGCGCGATCTGCGGA+GGG | 0.630677 | 8.1:+42888250 | None:intergenic |
| TAAATTACCTGAGGGAAACG+AGG | 0.631468 | 8.1:+42888057 | None:intergenic |
| AAAGATTAACAAATATACCG+AGG | 0.643261 | 8.1:-42886926 | MS.gene63092:CDS |
| AGCAATCGAAGCCAAGATCG+TGG | 0.645548 | 8.1:+42888309 | None:intergenic |
| AAACTTTGCAGTCTATCTGG+TGG | 0.646236 | 8.1:-42887913 | MS.gene63092:intron |
| AGGCAACTTTCCCACTATGG+CGG | 0.646590 | 8.1:-42887638 | MS.gene63092:CDS |
| TGCATGGCGACTACGAATGG+AGG | 0.648797 | 8.1:-42888479 | MS.gene63092:CDS |
| TATGCAAATATACTTCAGGT+GGG | 0.673254 | 8.1:+42887079 | None:intergenic |
| TGGCAAGTGACAGATCCCCT+CGG | 0.678473 | 8.1:+42886909 | None:intergenic |
| TCATGAAGAAGGAAGGAGGG+AGG | 0.681213 | 8.1:+42888090 | None:intergenic |
| TGAGCCGTTTGTCTTCTAGG+TGG | 0.697856 | 8.1:-42888367 | MS.gene63092:CDS |
| TGAGATCAAGTTCTTCAAGG+CGG | 0.698198 | 8.1:+42888135 | None:intergenic |
| ACACCTGAAGATCTTTCCAG+AGG | 0.719122 | 8.1:+42888339 | None:intergenic |
| GAAGTTGTATCTAAGCACAA+CGG | 0.731831 | 8.1:-42887839 | MS.gene63092:CDS |
| AGATTAACAAATATACCGAG+GGG | 0.744560 | 8.1:-42886924 | MS.gene63092:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATTTAAAGAAGAAT+TGG | + | chr8.1:42887387-42887406 | None:intergenic | 10.0% |
| !! | AATTAATTTAAAGAAGAATT+GGG | + | chr8.1:42887386-42887405 | None:intergenic | 10.0% |
| !! | CTTTATATATAAATATAGTT+TGG | - | chr8.1:42887874-42887893 | MS.gene63092:CDS | 10.0% |
| !!! | ATTCATTATTATCATTTTGA+AGG | + | chr8.1:42887803-42887822 | None:intergenic | 15.0% |
| !! | AATTCTGGATAATTTATATC+AGG | + | chr8.1:42887959-42887978 | None:intergenic | 20.0% |
| !! | GTTTAAATTAAATTACCTGA+GGG | + | chr8.1:42887308-42887327 | None:intergenic | 20.0% |
| !!! | AATTTTTAATCCTACGAAAT+TGG | - | chr8.1:42887402-42887421 | MS.gene63092:intron | 20.0% |
| !!! | TTGTTAATCTTTTGATAGAA+CGG | + | chr8.1:42888420-42888439 | None:intergenic | 20.0% |
| ! | AAAGATTAACAAATATACCG+AGG | - | chr8.1:42888428-42888447 | MS.gene63092:CDS | 25.0% |
| ! | AACAAATTCACTTTGACAAT+AGG | + | chr8.1:42887763-42887782 | None:intergenic | 25.0% |
| ! | AAGATTAACAAATATACCGA+GGG | - | chr8.1:42888429-42888448 | MS.gene63092:CDS | 25.0% |
| ! | AGTTTATTTGAATCCATCTT+TGG | - | chr8.1:42888108-42888127 | MS.gene63092:CDS | 25.0% |
| ! | ATGACTCGAAAATATATTTG+TGG | + | chr8.1:42888170-42888189 | None:intergenic | 25.0% |
| ! | CATCAAATTCATAGATGAAA+TGG | + | chr8.1:42887138-42887157 | None:intergenic | 25.0% |
| ! | GGTTTAAATTAAATTACCTG+AGG | + | chr8.1:42887309-42887328 | None:intergenic | 25.0% |
| !! | CAGAATATTTGAGTTAAAAC+AGG | + | chr8.1:42888013-42888032 | None:intergenic | 25.0% |
| !! | TGTTCTAAATAGCAAAATTC+TGG | + | chr8.1:42887974-42887993 | None:intergenic | 25.0% |
| !!! | CTGTTTTAACTCAAATATTC+TGG | - | chr8.1:42888011-42888030 | MS.gene63092:intron | 25.0% |
| AAGTCGAATGTATTGAAATG+TGG | - | chr8.1:42887176-42887195 | MS.gene63092:intron | 30.0% | |
| AGATTAACAAATATACCGAG+GGG | - | chr8.1:42888430-42888449 | MS.gene63092:CDS | 30.0% | |
| AGATTTGGAGATTTATTGTG+TGG | - | chr8.1:42887584-42887603 | MS.gene63092:CDS | 30.0% | |
| AGTCGAATGTATTGAAATGT+GGG | - | chr8.1:42887177-42887196 | MS.gene63092:intron | 30.0% | |
| ATCTGGTGGTAAATACAATA+TGG | - | chr8.1:42887455-42887474 | MS.gene63092:intron | 30.0% | |
| ATTTGCATAGAAGGATATCA+AGG | - | chr8.1:42888289-42888308 | MS.gene63092:CDS | 30.0% | |
| CTGAAGTATATTTGCATAGA+AGG | - | chr8.1:42888280-42888299 | MS.gene63092:CDS | 30.0% | |
| CTTCTATGCAAATATACTTC+AGG | + | chr8.1:42888282-42888301 | None:intergenic | 30.0% | |
| TATGCAAATATACTTCAGGT+GGG | + | chr8.1:42888278-42888297 | None:intergenic | 30.0% | |
| TCCGTTACGCAAAATATATT+CGG | + | chr8.1:42888338-42888357 | None:intergenic | 30.0% | |
| TTTGAAGGTGATTGAGAATA+GGG | + | chr8.1:42887788-42887807 | None:intergenic | 30.0% | |
| ! | TGAAATGGAACTTTTGAATG+TGG | + | chr8.1:42887123-42887142 | None:intergenic | 30.0% |
| !! | TTTTGAAGGTGATTGAGAAT+AGG | + | chr8.1:42887789-42887808 | None:intergenic | 30.0% |
| AAATTGGTGAACTCATGTGT+TGG | - | chr8.1:42887418-42887437 | MS.gene63092:intron | 35.0% | |
| AACCATCATCTTTACGAACA+TGG | - | chr8.1:42888215-42888234 | MS.gene63092:CDS | 35.0% | |
| ACACCAATGATAATTTCGCT+TGG | - | chr8.1:42887655-42887674 | MS.gene63092:CDS | 35.0% | |
| ACCATCATCTTTACGAACAT+GGG | - | chr8.1:42888216-42888235 | MS.gene63092:CDS | 35.0% | |
| ACTACTTATTCTGTCGATGT+GGG | + | chr8.1:42886903-42886922 | None:intergenic | 35.0% | |
| AGAAATGTGAACAAACCTTG+TGG | + | chr8.1:42888086-42888105 | None:intergenic | 35.0% | |
| AGATACAACTTCTTCAGTGA+TGG | + | chr8.1:42887507-42887526 | None:intergenic | 35.0% | |
| AGTCCAAGCGAAATTATCAT+TGG | + | chr8.1:42887661-42887680 | None:intergenic | 35.0% | |
| ATACATAGACAGACCAAAGA+TGG | + | chr8.1:42888124-42888143 | None:intergenic | 35.0% | |
| ATATGACACAGAACTGAATC+CGG | + | chr8.1:42886929-42886948 | None:intergenic | 35.0% | |
| CTATGCAAATATACTTCAGG+TGG | + | chr8.1:42888279-42888298 | None:intergenic | 35.0% | |
| GAAGTTGTATCTAAGCACAA+CGG | - | chr8.1:42887515-42887534 | MS.gene63092:intron | 35.0% | |
| TATACAATGATGGCAAGTGA+TGG | + | chr8.1:42887914-42887933 | None:intergenic | 35.0% | |
| TCTCATAATCAATAGCCACA+AGG | - | chr8.1:42888068-42888087 | MS.gene63092:CDS | 35.0% | |
| TGATGAGATCAAGTTCTTCA+AGG | + | chr8.1:42887225-42887244 | None:intergenic | 35.0% | |
| TTGGAGATTTATTGTGTGGA+TGG | - | chr8.1:42887588-42887607 | MS.gene63092:CDS | 35.0% | |
| TTTATATCAGGAACCTGAAG+TGG | + | chr8.1:42887947-42887966 | None:intergenic | 35.0% | |
| ! | GCCGAATATATTTTGCGTAA+CGG | - | chr8.1:42888334-42888353 | MS.gene63092:CDS | 35.0% |
| AAACTTTGCAGTCTATCTGG+TGG | - | chr8.1:42887441-42887460 | MS.gene63092:intron | 40.0% | |
| AACTTAACTTTGACGCAGAC+GGG | - | chr8.1:42888467-42888486 | MS.gene63092:CDS | 40.0% | |
| AATCTCCAAATCTTCGAGCT+TGG | + | chr8.1:42887577-42887596 | None:intergenic | 40.0% | |
| ATCTCCAAATCTTCGAGCTT+GGG | + | chr8.1:42887576-42887595 | None:intergenic | 40.0% | |
| ATTGTATCTGTGATAGCTGC+TGG | + | chr8.1:42887330-42887349 | None:intergenic | 40.0% | |
| CAACTTAACTTTGACGCAGA+CGG | - | chr8.1:42888466-42888485 | MS.gene63092:CDS | 40.0% | |
| CATGAGTTCACCAATTTCGT+AGG | + | chr8.1:42887415-42887434 | None:intergenic | 40.0% | |
| CCACTGCATGTATACAATGA+TGG | + | chr8.1:42887924-42887943 | None:intergenic | 40.0% | |
| CCATCATTGTATACATGCAG+TGG | - | chr8.1:42887921-42887940 | MS.gene63092:intron | 40.0% | |
| CGACAGAATAAGTAGTCTAC+CGG | - | chr8.1:42886907-42886926 | MS.gene63092:CDS | 40.0% | |
| GACTACTTATTCTGTCGATG+TGG | + | chr8.1:42886904-42886923 | None:intergenic | 40.0% | |
| GTATTTCAACCTCTTGAAGC+TGG | + | chr8.1:42887637-42887656 | None:intergenic | 40.0% | |
| GTCACGTCATTCAACATCAA+AGG | - | chr8.1:42887833-42887852 | MS.gene63092:CDS | 40.0% | |
| GTCATCTTGTTCCATGTTAC+TGG | - | chr8.1:42888185-42888204 | MS.gene63092:CDS | 40.0% | |
| TAAATTACCTGAGGGAAACG+AGG | + | chr8.1:42887300-42887319 | None:intergenic | 40.0% | |
| TCAATAGTTGCCTTTCTCTC+CGG | - | chr8.1:42887546-42887565 | MS.gene63092:CDS | 40.0% | |
| TCCCATGTTCGTAAAGATGA+TGG | + | chr8.1:42888220-42888239 | None:intergenic | 40.0% | |
| TCTTGTTCCATGTTACTGGT+AGG | - | chr8.1:42888189-42888208 | MS.gene63092:CDS | 40.0% | |
| TGAGATCAAGTTCTTCAAGG+CGG | + | chr8.1:42887222-42887241 | None:intergenic | 40.0% | |
| TGGAAACTTTGCAGTCTATC+TGG | - | chr8.1:42887438-42887457 | MS.gene63092:intron | 40.0% | |
| TTGCAACAGACGTTCTTGTT+GGG | + | chr8.1:42886964-42886983 | None:intergenic | 40.0% | |
| TTGTGTGGATGGAATCAGTT+TGG | - | chr8.1:42887599-42887618 | MS.gene63092:CDS | 40.0% | |
| ! | CTAGGAACAGTTGTTGATTG+TGG | + | chr8.1:42888244-42888263 | None:intergenic | 40.0% |
| !!! | TTTGCGTAACGGACTTGTTT+TGG | - | chr8.1:42888345-42888364 | MS.gene63092:CDS | 40.0% |
| AAGAAATGCTTCCGCCATAG+TGG | + | chr8.1:42887730-42887749 | None:intergenic | 45.0% | |
| AAGCTTTCTCCAGCTTCAAG+AGG | - | chr8.1:42887625-42887644 | MS.gene63092:CDS | 45.0% | |
| ACACCTGAAGATCTTTCCAG+AGG | + | chr8.1:42887018-42887037 | None:intergenic | 45.0% | |
| AGAAATGCTTCCGCCATAGT+GGG | + | chr8.1:42887729-42887748 | None:intergenic | 45.0% | |
| AGATCAAGTTCTTCAAGGCG+GGG | + | chr8.1:42887220-42887239 | None:intergenic | 45.0% | |
| AGCTCATGAAGAAGGAAGGA+GGG | + | chr8.1:42887270-42887289 | None:intergenic | 45.0% | |
| AGGTGGGATATGAGACATCT+AGG | + | chr8.1:42888262-42888281 | None:intergenic | 45.0% | |
| ATGTGTAGCCACCAAGATGA+AGG | + | chr8.1:42887686-42887705 | None:intergenic | 45.0% | |
| CGTCTGCGTCAAAGTTAAGT+TGG | + | chr8.1:42888468-42888487 | None:intergenic | 45.0% | |
| GAGATCAAGTTCTTCAAGGC+GGG | + | chr8.1:42887221-42887240 | None:intergenic | 45.0% | |
| GCTTGGACTTACCTTCATCT+TGG | - | chr8.1:42887672-42887691 | MS.gene63092:CDS | 45.0% | |
| GTTGCAACAGACGTTCTTGT+TGG | + | chr8.1:42886965-42886984 | None:intergenic | 45.0% | |
| GTTGTTGCAGCTCATGAAGA+AGG | + | chr8.1:42887278-42887297 | None:intergenic | 45.0% | |
| TCTCCAAATCTTCGAGCTTG+GGG | + | chr8.1:42887575-42887594 | None:intergenic | 45.0% | |
| TGGACTTACCTTCATCTTGG+TGG | - | chr8.1:42887675-42887694 | MS.gene63092:CDS | 45.0% | |
| TGTTCCATGTTACTGGTAGG+AGG | - | chr8.1:42888192-42888211 | MS.gene63092:CDS | 45.0% | |
| TTGCAGCTCATGAAGAAGGA+AGG | + | chr8.1:42887274-42887293 | None:intergenic | 45.0% | |
| ! | CATCTTGGTGGCTACACATT+GGG | - | chr8.1:42887687-42887706 | MS.gene63092:CDS | 45.0% |
| ! | TCATCTTGGTGGCTACACAT+TGG | - | chr8.1:42887686-42887705 | MS.gene63092:CDS | 45.0% |
| AGACGTTCTTGTTGGGAGGA+AGG | + | chr8.1:42886957-42886976 | None:intergenic | 50.0% | |
| AGCAATCGAAGCCAAGATCG+TGG | + | chr8.1:42887048-42887067 | None:intergenic | 50.0% | |
| AGGCAACTTTCCCACTATGG+CGG | - | chr8.1:42887716-42887735 | MS.gene63092:CDS | 50.0% | |
| ATACATGCAGTGGCCACTTC+AGG | - | chr8.1:42887931-42887950 | MS.gene63092:intron | 50.0% | |
| CAACAGACGTTCTTGTTGGG+AGG | + | chr8.1:42886961-42886980 | None:intergenic | 50.0% | |
| CAGCTCATGAAGAAGGAAGG+AGG | + | chr8.1:42887271-42887290 | None:intergenic | 50.0% | |
| CCATGAGCCGTTTGTCTTCT+AGG | - | chr8.1:42886984-42887003 | MS.gene63092:CDS | 50.0% | |
| CCTAGAAGACAAACGGCTCA+TGG | + | chr8.1:42886987-42887006 | None:intergenic | 50.0% | |
| CCTGAAGATCTTTCCAGAGG+TGG | + | chr8.1:42887015-42887034 | None:intergenic | 50.0% | |
| GATCAAGTTCTTCAAGGCGG+GGG | + | chr8.1:42887219-42887238 | None:intergenic | 50.0% | |
| GGTTCCTCCTACCAGTAACA+TGG | + | chr8.1:42888199-42888218 | None:intergenic | 50.0% | |
| GTGTTCTGCTTCCACGATCT+TGG | - | chr8.1:42887034-42887053 | MS.gene63092:CDS | 50.0% | |
| TCATGAAGAAGGAAGGAGGG+AGG | + | chr8.1:42887267-42887286 | None:intergenic | 50.0% | |
| TGAGCCGTTTGTCTTCTAGG+TGG | - | chr8.1:42886987-42887006 | MS.gene63092:CDS | 50.0% | |
| TGCAGGCAACTTTCCCACTA+TGG | - | chr8.1:42887713-42887732 | MS.gene63092:CDS | 50.0% | |
| TTTGAATGTGGCGCGATCTG+CGG | + | chr8.1:42887111-42887130 | None:intergenic | 50.0% | |
| ! | CCACCTCTGGAAAGATCTTC+AGG | - | chr8.1:42887012-42887031 | MS.gene63092:CDS | 50.0% |
| ATGTGGGTCCGTTCTGCCAT+TGG | - | chr8.1:42887193-42887212 | MS.gene63092:intron | 55.0% | |
| CTGCCCCAAGCTCGAAGATT+TGG | - | chr8.1:42887569-42887588 | MS.gene63092:CDS | 55.0% | |
| GCAACAACCTCGTTTCCCTC+AGG | - | chr8.1:42887290-42887309 | MS.gene63092:intron | 55.0% | |
| GGCGCCACCTAGAAGACAAA+CGG | + | chr8.1:42886994-42887013 | None:intergenic | 55.0% | |
| TGGCAAGTGACAGATCCCCT+CGG | + | chr8.1:42888448-42888467 | None:intergenic | 55.0% | |
| ! | GGCTACACATTGGGCATTGC+AGG | - | chr8.1:42887696-42887715 | MS.gene63092:CDS | 55.0% |
| AATGTGGCGCGATCTGCGGA+GGG | + | chr8.1:42887107-42887126 | None:intergenic | 60.0% | |
| ATCTTCGAGCTTGGGGCAGC+CGG | + | chr8.1:42887568-42887587 | None:intergenic | 60.0% | |
| TTCTTCAAGGCGGGGGCCAA+TGG | + | chr8.1:42887212-42887231 | None:intergenic | 60.0% | |
| CTTCTAGGTGGCGCCACCTC+TGG | - | chr8.1:42886999-42887018 | MS.gene63092:CDS | 65.0% | |
| CTTGGGGCAGCCGGAGAGAA+AGG | + | chr8.1:42887559-42887578 | None:intergenic | 65.0% | |
| GAATGTGGCGCGATCTGCGG+AGG | + | chr8.1:42887108-42887127 | None:intergenic | 65.0% | |
| GGCGGGGGCCAATGGCAGAA+CGG | + | chr8.1:42887204-42887223 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 42886878 | 42888498 | 42886878 | ID=MS.gene63092 |
| chr8.1 | mRNA | 42886878 | 42888498 | 42886878 | ID=MS.gene63092.t1;Parent=MS.gene63092 |
| chr8.1 | exon | 42888065 | 42888498 | 42888065 | ID=MS.gene63092.t1.exon1;Parent=MS.gene63092.t1 |
| chr8.1 | CDS | 42888065 | 42888498 | 42888065 | ID=cds.MS.gene63092.t1;Parent=MS.gene63092.t1 |
| chr8.1 | exon | 42887522 | 42887924 | 42887522 | ID=MS.gene63092.t1.exon2;Parent=MS.gene63092.t1 |
| chr8.1 | CDS | 42887522 | 42887924 | 42887522 | ID=cds.MS.gene63092.t1;Parent=MS.gene63092.t1 |
| chr8.1 | exon | 42886878 | 42887165 | 42886878 | ID=MS.gene63092.t1.exon3;Parent=MS.gene63092.t1 |
| chr8.1 | CDS | 42886878 | 42887165 | 42886878 | ID=cds.MS.gene63092.t1;Parent=MS.gene63092.t1 |
| Gene Sequence |
| Protein sequence |
