Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63141.t1 | KEH22406.1 | 78.2 | 234 | 33 | 1 | 136 | 369 | 65 | 280 | 4.10E-96 | 361.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63141.t1 | Q9SZL8 | 33.9 | 192 | 123 | 4 | 163 | 352 | 77 | 266 | 1.0e-18 | 95.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63141.t1 | A0A072TZ24 | 78.2 | 234 | 33 | 1 | 136 | 369 | 65 | 280 | 2.9e-96 | 361.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene63141.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049853 | MS.gene63141 | 0.830126 | 3.50E-55 | -1.69E-46 |
| MS.gene052447 | MS.gene63141 | 0.848579 | 5.60E-60 | -1.69E-46 |
| MS.gene05329 | MS.gene63141 | 0.846514 | 2.07E-59 | -1.69E-46 |
| MS.gene055017 | MS.gene63141 | 0.815255 | 1.02E-51 | -1.69E-46 |
| MS.gene055952 | MS.gene63141 | 0.811883 | 5.60E-51 | -1.69E-46 |
| MS.gene058580 | MS.gene63141 | 0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene059276 | MS.gene63141 | 0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene059458 | MS.gene63141 | 0.815167 | 1.06E-51 | -1.69E-46 |
| MS.gene059460 | MS.gene63141 | 0.819408 | 1.18E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63141.t1 | MTR_7g446520 | 70.064 | 314 | 46 | 3 | 56 | 369 | 15 | 280 | 2.53e-146 | 417 |
| MS.gene63141.t1 | MTR_7g028855 | 69.307 | 303 | 52 | 4 | 1 | 302 | 1 | 263 | 7.73e-134 | 390 |
| MS.gene63141.t1 | MTR_7g446480 | 54.768 | 367 | 71 | 8 | 3 | 369 | 2 | 273 | 1.39e-115 | 338 |
| MS.gene63141.t1 | MTR_7g446510 | 57.143 | 224 | 80 | 5 | 150 | 369 | 77 | 288 | 1.65e-73 | 231 |
| MS.gene63141.t1 | MTR_1g070355 | 31.818 | 242 | 159 | 2 | 128 | 369 | 47 | 282 | 8.73e-33 | 129 |
| MS.gene63141.t1 | MTR_5g076070 | 26.415 | 265 | 161 | 3 | 105 | 369 | 31 | 261 | 1.63e-27 | 110 |
| MS.gene63141.t1 | MTR_6g022080 | 25.871 | 201 | 145 | 3 | 124 | 321 | 48 | 247 | 1.84e-18 | 84.3 |
| MS.gene63141.t1 | MTR_8g467420 | 43.836 | 73 | 41 | 0 | 142 | 214 | 61 | 133 | 1.02e-16 | 77.4 |
| MS.gene63141.t1 | MTR_6g053140 | 32.353 | 170 | 99 | 5 | 105 | 272 | 51 | 206 | 3.02e-16 | 77.4 |
| MS.gene63141.t1 | MTR_0402s0040 | 33.728 | 169 | 104 | 4 | 161 | 326 | 28 | 191 | 3.87e-16 | 80.1 |
| MS.gene63141.t1 | MTR_3g448650 | 42.500 | 80 | 46 | 0 | 155 | 234 | 78 | 157 | 2.68e-14 | 70.9 |
| MS.gene63141.t1 | MTR_2g101460 | 30.233 | 172 | 107 | 1 | 105 | 276 | 14 | 172 | 4.41e-14 | 70.9 |
| MS.gene63141.t1 | MTR_0060s0090 | 38.462 | 78 | 48 | 0 | 164 | 241 | 61 | 138 | 7.83e-14 | 68.9 |
| MS.gene63141.t1 | MTR_2g101460 | 34.426 | 122 | 80 | 0 | 155 | 276 | 41 | 162 | 3.20e-13 | 68.2 |
| MS.gene63141.t1 | MTR_4g035820 | 29.767 | 215 | 133 | 7 | 165 | 369 | 81 | 287 | 3.81e-13 | 71.2 |
| MS.gene63141.t1 | MTR_6g051425 | 26.471 | 204 | 146 | 3 | 169 | 369 | 27 | 229 | 7.42e-13 | 69.3 |
| MS.gene63141.t1 | MTR_2g098880 | 36.842 | 114 | 69 | 3 | 156 | 267 | 58 | 170 | 7.78e-13 | 68.2 |
| MS.gene63141.t1 | MTR_2g098880 | 36.842 | 114 | 69 | 3 | 156 | 267 | 70 | 182 | 1.07e-12 | 67.8 |
| MS.gene63141.t1 | MTR_1g008290 | 33.607 | 122 | 76 | 2 | 219 | 340 | 10 | 126 | 1.76e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63141.t1 | AT4G38180 | 34.031 | 191 | 122 | 4 | 163 | 351 | 77 | 265 | 3.93e-18 | 86.7 |
| MS.gene63141.t1 | AT3G07500 | 37.719 | 114 | 67 | 3 | 154 | 266 | 28 | 138 | 3.30e-12 | 65.9 |
| MS.gene63141.t1 | AT4G15090 | 25.837 | 209 | 149 | 5 | 163 | 369 | 55 | 259 | 1.11e-11 | 66.6 |
| MS.gene63141.t1 | AT4G15090 | 25.837 | 209 | 149 | 5 | 163 | 369 | 55 | 259 | 1.11e-11 | 66.6 |
| MS.gene63141.t1 | AT4G15090 | 25.837 | 209 | 149 | 5 | 163 | 369 | 55 | 259 | 1.11e-11 | 66.6 |
| MS.gene63141.t1 | AT4G15090 | 25.837 | 209 | 149 | 5 | 163 | 369 | 55 | 259 | 1.11e-11 | 66.6 |
| MS.gene63141.t1 | AT4G15090 | 25.837 | 209 | 149 | 5 | 163 | 369 | 55 | 259 | 1.11e-11 | 66.6 |
Find 70 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.048057 | 8.1:+43571514 | MS.gene63141:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 8.1:+43572374 | MS.gene63141:CDS |
| TGCATTTACACCTTGTTTAT+CGG | 0.260369 | 8.1:+43572301 | MS.gene63141:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 8.1:+43572215 | MS.gene63141:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 8.1:+43571739 | MS.gene63141:CDS |
| ATTAACTGCTGAAGGAATAA+TGG | 0.327415 | 8.1:+43571960 | MS.gene63141:CDS |
| CTGTTAAGAAGAGTGATATT+AGG | 0.348071 | 8.1:+43572052 | MS.gene63141:CDS |
| GTAGAACCGTAATCATATTT+CGG | 0.389914 | 8.1:-43571541 | None:intergenic |
| ACCACCATCATCACTTTCAT+TGG | 0.398625 | 8.1:-43571731 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 8.1:+43572375 | MS.gene63141:CDS |
| TGCTGAAGGAATAATGGAAA+TGG | 0.417359 | 8.1:+43571966 | MS.gene63141:CDS |
| TGTAAATGCACAACACTAGA+TGG | 0.434308 | 8.1:-43572288 | None:intergenic |
| GGTTCACCGAAATATGATTA+CGG | 0.436818 | 8.1:+43571535 | MS.gene63141:CDS |
| GACGATAGTTCTGATGAAAC+TGG | 0.443925 | 8.1:+43571706 | MS.gene63141:CDS |
| GATTATAGTGTTGGTGATAA+AGG | 0.444719 | 8.1:+43571763 | MS.gene63141:CDS |
| GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 8.1:+43572133 | MS.gene63141:CDS |
| TTTAAGTACTGTAAGTGTAA+AGG | 0.451106 | 8.1:+43572024 | MS.gene63141:CDS |
| AAGGGTGGATATCCTGGTGT+TGG | 0.458467 | 8.1:+43572414 | MS.gene63141:CDS |
| GCTCAGAAGGGTGGATATCC+TGG | 0.461189 | 8.1:+43572408 | MS.gene63141:CDS |
| AAACCTATCCGATGATTGTT+GGG | 0.461967 | 8.1:+43571584 | MS.gene63141:CDS |
| TAGTGAACACGAAGCCTAGC+TGG | 0.465685 | 8.1:-43572201 | None:intergenic |
| GCAGATAAAGCACAAATTGA+TGG | 0.466709 | 8.1:+43572336 | MS.gene63141:CDS |
| CACTAGATGGAGTAAGTTCA+TGG | 0.468010 | 8.1:-43572275 | None:intergenic |
| TGTTCTGGTGATTATAGTGT+TGG | 0.469535 | 8.1:+43571754 | MS.gene63141:CDS |
| AGGGTGGATATCCTGGTGTT+GGG | 0.476260 | 8.1:+43572415 | MS.gene63141:CDS |
| CAATATTCTACCACTGATGA+TGG | 0.484309 | 8.1:+43572564 | MS.gene63141:CDS |
| AATAATGGAAATGGAATTTG+CGG | 0.487093 | 8.1:+43571975 | MS.gene63141:CDS |
| GGGATACATTGTGGCTCAGA+AGG | 0.492920 | 8.1:+43572395 | MS.gene63141:CDS |
| GAAACCTATCCGATGATTGT+TGG | 0.493181 | 8.1:+43571583 | MS.gene63141:CDS |
| AATGTAGATGATAGTTCTGA+TGG | 0.493462 | 8.1:+43571640 | MS.gene63141:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 8.1:+43572104 | MS.gene63141:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 8.1:+43571924 | MS.gene63141:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 8.1:+43571913 | MS.gene63141:CDS |
| AGTGAAGGTCATGGTAATGA+AGG | 0.507811 | 8.1:+43571859 | MS.gene63141:CDS |
| ATAATGGAAATGGAATTTGC+GGG | 0.512795 | 8.1:+43571976 | MS.gene63141:CDS |
| CCGATGATTGTTGGGAGTCA+AGG | 0.516932 | 8.1:+43571592 | MS.gene63141:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 8.1:+43571952 | MS.gene63141:CDS |
| CCTTGACTCCCAACAATCAT+CGG | 0.519588 | 8.1:-43571592 | None:intergenic |
| AGCATTTATCAAGGTCAGAT+AGG | 0.519899 | 8.1:+43572142 | MS.gene63141:CDS |
| CAGAATTCTCAAGCGAATGC+AGG | 0.540569 | 8.1:+43571682 | MS.gene63141:CDS |
| TGATTACGGTTCTACGAATG+TGG | 0.550987 | 8.1:+43571549 | MS.gene63141:CDS |
| TGTTTATCGGCAAATATTCG+AGG | 0.554010 | 8.1:+43572314 | MS.gene63141:CDS |
| CGAATATTTGCCGATAAACA+AGG | 0.558539 | 8.1:-43572311 | None:intergenic |
| TTCTTAGTGAACCCAACACC+AGG | 0.567834 | 8.1:-43572426 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 8.1:+43571929 | MS.gene63141:CDS |
| ACTCCCAACAATCATCGGAT+AGG | 0.580782 | 8.1:-43571587 | None:intergenic |
| TACATTGTGGCTCAGAAGGG+TGG | 0.583038 | 8.1:+43572399 | MS.gene63141:CDS |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 8.1:+43572105 | MS.gene63141:CDS |
| AGAGGAATGTGGATCAGTTG+AGG | 0.594052 | 8.1:-43572538 | None:intergenic |
| TCATATAATGGGATACATTG+TGG | 0.603031 | 8.1:+43572386 | MS.gene63141:CDS |
| GGAGCCAATGAAAGTGATGA+TGG | 0.608934 | 8.1:+43571727 | MS.gene63141:CDS |
| GGTGAAGATGATGAAAGTCA+AGG | 0.619507 | 8.1:+43571784 | MS.gene63141:CDS |
| GGTCATGGTAATGAAGGTCA+TGG | 0.621031 | 8.1:+43571865 | MS.gene63141:CDS |
| GATAGTTCTGATGGGAGTCG+TGG | 0.630048 | 8.1:+43571649 | MS.gene63141:CDS |
| GAATATTGACAAGAGGAATG+TGG | 0.631435 | 8.1:-43572549 | None:intergenic |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 8.1:+43572106 | MS.gene63141:CDS |
| ATGTAGATGATAGTTCTGAT+GGG | 0.634382 | 8.1:+43571641 | MS.gene63141:CDS |
| GGATACATTGTGGCTCAGAA+GGG | 0.635876 | 8.1:+43572396 | MS.gene63141:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 8.1:+43572187 | MS.gene63141:CDS |
| ATTGATGGTCTTCAATTACA+CGG | 0.645357 | 8.1:+43572351 | MS.gene63141:CDS |
| AGTGGTAGAATATTGACAAG+AGG | 0.645661 | 8.1:-43572556 | None:intergenic |
| AATGAAGGTCATGGTAGTGA+AGG | 0.653004 | 8.1:+43571874 | MS.gene63141:CDS |
| TTTCAAACGTCCATCATCAG+TGG | 0.659865 | 8.1:-43572574 | None:intergenic |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 8.1:+43571918 | MS.gene63141:CDS |
| TTAACGATGAGATTGTAATG+AGG | 0.666140 | 8.1:+43572082 | MS.gene63141:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.683798 | 8.1:+43571850 | MS.gene63141:CDS |
| AGTGAAGGTGATGAAACTGA+AGG | 0.712471 | 8.1:+43571829 | MS.gene63141:CDS |
| AGTGAAAGTGATGAAAGTGA+AGG | 0.717258 | 8.1:+43571814 | MS.gene63141:CDS |
| ACTGAAGGTGATGAAAGTGA+AGG | 0.722369 | 8.1:+43571844 | MS.gene63141:CDS |
| GCCAATGAAAGTGATGATGG+TGG | 0.745932 | 8.1:+43571730 | MS.gene63141:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAACAATGACTTTA+CGG | + | chr8.1:43571507-43571526 | MS.gene63141:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | + | chr8.1:43572374-43572393 | MS.gene63141:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | + | chr8.1:43572375-43572394 | MS.gene63141:CDS | 20.0% |
| !!! | AAAAATGTGTGTTGTTATTA+AGG | + | chr8.1:43572473-43572492 | MS.gene63141:CDS | 20.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | + | chr8.1:43571952-43571971 | MS.gene63141:CDS | 25.0% |
| !! | AATAATGGAAATGGAATTTG+CGG | + | chr8.1:43571975-43571994 | MS.gene63141:CDS | 25.0% |
| !! | ATAACATATCTACCCTTTTT+GGG | - | chr8.1:43572231-43572250 | None:intergenic | 25.0% |
| !! | TTTAAGTACTGTAAGTGTAA+AGG | + | chr8.1:43572024-43572043 | MS.gene63141:CDS | 25.0% |
| ATTAACTGCTGAAGGAATAA+TGG | + | chr8.1:43571960-43571979 | MS.gene63141:CDS | 30.0% | |
| CTGTTAAGAAGAGTGATATT+AGG | + | chr8.1:43572052-43572071 | MS.gene63141:CDS | 30.0% | |
| GTAGAACCGTAATCATATTT+CGG | - | chr8.1:43571544-43571563 | None:intergenic | 30.0% | |
| TTAACGATGAGATTGTAATG+AGG | + | chr8.1:43572082-43572101 | MS.gene63141:CDS | 30.0% | |
| ! | AACAATGACTTTACGGATTT+TGG | + | chr8.1:43571514-43571533 | MS.gene63141:CDS | 30.0% |
| ! | ATAATGGAAATGGAATTTGC+GGG | + | chr8.1:43571976-43571995 | MS.gene63141:CDS | 30.0% |
| ! | ATTGATGGTCTTCAATTACA+CGG | + | chr8.1:43572351-43572370 | MS.gene63141:CDS | 30.0% |
| ! | CATAACATATCTACCCTTTT+TGG | - | chr8.1:43572232-43572251 | None:intergenic | 30.0% |
| ! | TCATATAATGGGATACATTG+TGG | + | chr8.1:43572386-43572405 | MS.gene63141:CDS | 30.0% |
| ! | TGCATTTACACCTTGTTTAT+CGG | + | chr8.1:43572301-43572320 | MS.gene63141:CDS | 30.0% |
| !! | AATGTAGATGATAGTTCTGA+TGG | + | chr8.1:43571640-43571659 | MS.gene63141:CDS | 30.0% |
| !! | ATGTAGATGATAGTTCTGAT+GGG | + | chr8.1:43571641-43571660 | MS.gene63141:CDS | 30.0% |
| !! | GATTATAGTGTTGGTGATAA+AGG | + | chr8.1:43571763-43571782 | MS.gene63141:CDS | 30.0% |
| AAACCTATCCGATGATTGTT+GGG | + | chr8.1:43571584-43571603 | MS.gene63141:CDS | 35.0% | |
| AGCATTTATCAAGGTCAGAT+AGG | + | chr8.1:43572142-43572161 | MS.gene63141:CDS | 35.0% | |
| AGTGAAAGTGATGAAAGTGA+AGG | + | chr8.1:43571814-43571833 | MS.gene63141:CDS | 35.0% | |
| AGTGGTAGAATATTGACAAG+AGG | - | chr8.1:43572559-43572578 | None:intergenic | 35.0% | |
| CAATATTCTACCACTGATGA+TGG | + | chr8.1:43572564-43572583 | MS.gene63141:CDS | 35.0% | |
| CGAATATTTGCCGATAAACA+AGG | - | chr8.1:43572314-43572333 | None:intergenic | 35.0% | |
| GAATATTGACAAGAGGAATG+TGG | - | chr8.1:43572552-43572571 | None:intergenic | 35.0% | |
| GCAGATAAAGCACAAATTGA+TGG | + | chr8.1:43572336-43572355 | MS.gene63141:CDS | 35.0% | |
| GGTTCACCGAAATATGATTA+CGG | + | chr8.1:43571535-43571554 | MS.gene63141:CDS | 35.0% | |
| TGTAAATGCACAACACTAGA+TGG | - | chr8.1:43572291-43572310 | None:intergenic | 35.0% | |
| TGTTCTGGTGATTATAGTGT+TGG | + | chr8.1:43571754-43571773 | MS.gene63141:CDS | 35.0% | |
| TGTTTATCGGCAAATATTCG+AGG | + | chr8.1:43572314-43572333 | MS.gene63141:CDS | 35.0% | |
| ! | GAAGATGATGATGTAGTTGT+TGG | + | chr8.1:43571913-43571932 | MS.gene63141:CDS | 35.0% |
| ! | TGCTGAAGGAATAATGGAAA+TGG | + | chr8.1:43571966-43571985 | MS.gene63141:CDS | 35.0% |
| !! | GAGAGAAGAAGCATTTATCA+AGG | + | chr8.1:43572133-43572152 | MS.gene63141:CDS | 35.0% |
| ACCACCATCATCACTTTCAT+TGG | - | chr8.1:43571734-43571753 | None:intergenic | 40.0% | |
| ACTGAAGGTGATGAAAGTGA+AGG | + | chr8.1:43571844-43571863 | MS.gene63141:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | + | chr8.1:43572106-43572125 | MS.gene63141:CDS | 40.0% | |
| AGTGAAGGTGATGAAACTGA+AGG | + | chr8.1:43571829-43571848 | MS.gene63141:CDS | 40.0% | |
| CACTAGATGGAGTAAGTTCA+TGG | - | chr8.1:43572278-43572297 | None:intergenic | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | + | chr8.1:43572105-43572124 | MS.gene63141:CDS | 40.0% | |
| GAAACCTATCCGATGATTGT+TGG | + | chr8.1:43571583-43571602 | MS.gene63141:CDS | 40.0% | |
| GGTGAAGATGATGAAAGTCA+AGG | + | chr8.1:43571784-43571803 | MS.gene63141:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | + | chr8.1:43572216-43572235 | MS.gene63141:CDS | 40.0% | |
| TGATTACGGTTCTACGAATG+TGG | + | chr8.1:43571549-43571568 | MS.gene63141:CDS | 40.0% | |
| TGTTCACTACAGACCCAAAA+AGG | + | chr8.1:43572215-43572234 | MS.gene63141:CDS | 40.0% | |
| TTTCAAACGTCCATCATCAG+TGG | - | chr8.1:43572577-43572596 | None:intergenic | 40.0% | |
| ! | AATGAAGGTCATGGTAGTGA+AGG | + | chr8.1:43571874-43571893 | MS.gene63141:CDS | 40.0% |
| ! | AGTGAAGGTCATGGTAATGA+AGG | + | chr8.1:43571859-43571878 | MS.gene63141:CDS | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | + | chr8.1:43571918-43571937 | MS.gene63141:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | + | chr8.1:43571924-43571943 | MS.gene63141:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | + | chr8.1:43571929-43571948 | MS.gene63141:CDS | 40.0% |
| !! | GACGATAGTTCTGATGAAAC+TGG | + | chr8.1:43571706-43571725 | MS.gene63141:CDS | 40.0% |
| ACTCCCAACAATCATCGGAT+AGG | - | chr8.1:43571590-43571609 | None:intergenic | 45.0% | |
| AGAGGAATGTGGATCAGTTG+AGG | - | chr8.1:43572541-43572560 | None:intergenic | 45.0% | |
| CAGAATTCTCAAGCGAATGC+AGG | + | chr8.1:43571682-43571701 | MS.gene63141:CDS | 45.0% | |
| CCTTGACTCCCAACAATCAT+CGG | - | chr8.1:43571595-43571614 | None:intergenic | 45.0% | |
| GCAGTATGTATGCAACAAGC+AGG | + | chr8.1:43572104-43572123 | MS.gene63141:CDS | 45.0% | |
| GGAGCCAATGAAAGTGATGA+TGG | + | chr8.1:43571727-43571746 | MS.gene63141:CDS | 45.0% | |
| GGATACATTGTGGCTCAGAA+GGG | + | chr8.1:43572396-43572415 | MS.gene63141:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr8.1:43571850-43571869 | MS.gene63141:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | - | chr8.1:43572429-43572448 | None:intergenic | 45.0% | |
| ! | GGTCATGGTAATGAAGGTCA+TGG | + | chr8.1:43571865-43571884 | MS.gene63141:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | + | chr8.1:43571739-43571758 | MS.gene63141:CDS | 45.0% |
| !! | GCCAATGAAAGTGATGATGG+TGG | + | chr8.1:43571730-43571749 | MS.gene63141:CDS | 45.0% |
| AAGGGTGGATATCCTGGTGT+TGG | + | chr8.1:43572414-43572433 | MS.gene63141:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | + | chr8.1:43572415-43572434 | MS.gene63141:CDS | 50.0% | |
| CCGATGATTGTTGGGAGTCA+AGG | + | chr8.1:43571592-43571611 | MS.gene63141:CDS | 50.0% | |
| GGGATACATTGTGGCTCAGA+AGG | + | chr8.1:43572395-43572414 | MS.gene63141:CDS | 50.0% | |
| TACATTGTGGCTCAGAAGGG+TGG | + | chr8.1:43572399-43572418 | MS.gene63141:CDS | 50.0% | |
| TAGTGAACACGAAGCCTAGC+TGG | - | chr8.1:43572204-43572223 | None:intergenic | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr8.1:43572187-43572206 | MS.gene63141:CDS | 50.0% |
| !! | GATAGTTCTGATGGGAGTCG+TGG | + | chr8.1:43571649-43571668 | MS.gene63141:CDS | 50.0% |
| GCTCAGAAGGGTGGATATCC+TGG | + | chr8.1:43572408-43572427 | MS.gene63141:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 43571499 | 43572608 | 43571499 | ID=MS.gene63141 |
| chr8.1 | mRNA | 43571499 | 43572608 | 43571499 | ID=MS.gene63141.t1;Parent=MS.gene63141 |
| chr8.1 | exon | 43571499 | 43572608 | 43571499 | ID=MS.gene63141.t1.exon1;Parent=MS.gene63141.t1 |
| chr8.1 | CDS | 43571499 | 43572608 | 43571499 | ID=cds.MS.gene63141.t1;Parent=MS.gene63141.t1 |
| Gene Sequence |
| Protein sequence |
