AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63435

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63435.t1 MTR_6g084710 94.221 571 27 3 1 567 1 569 0.0 1072
MS.gene63435.t1 MTR_6g084710 94.235 503 24 2 1 500 1 501 0.0 945
MS.gene63435.t1 MTR_1g029810 45.383 379 192 6 175 549 42 409 1.05e-96 301
MS.gene63435.t1 MTR_1g029810 45.383 379 192 6 175 549 42 409 3.57e-96 300
MS.gene63435.t1 MTR_8g094590 44.737 380 192 10 175 549 58 424 6.38e-96 299
MS.gene63435.t1 MTR_3g096930 44.709 378 194 11 175 549 69 434 1.07e-93 294
MS.gene63435.t1 MTR_4g023650 42.746 386 198 10 175 549 46 419 1.44e-92 290
MS.gene63435.t1 MTR_4g023630 41.495 388 200 11 175 549 46 419 6.47e-90 283
MS.gene63435.t1 MTR_8g094590 44.847 359 180 10 175 528 58 403 2.37e-88 279
MS.gene63435.t1 MTR_8g094590 44.275 262 130 8 175 432 58 307 2.87e-61 205
MS.gene63435.t1 MTR_3g006820 31.218 394 226 15 175 549 45 412 3.38e-48 173
MS.gene63435.t1 MTR_1g061940 28.608 388 229 12 189 551 82 446 2.33e-38 148
MS.gene63435.t1 MTR_7g102750 27.901 405 246 13 186 567 77 458 1.66e-35 139
MS.gene63435.t1 MTR_2g084550 26.807 429 263 12 147 551 38 439 4.47e-35 138
MS.gene63435.t1 MTR_8g075090 28.760 379 220 14 190 549 112 459 5.72e-35 138
MS.gene63435.t1 MTR_4g056420 27.889 398 239 16 179 551 64 438 1.50e-34 136
MS.gene63435.t1 MTR_8g075090 28.760 379 220 14 190 549 112 459 1.70e-34 136
MS.gene63435.t1 MTR_7g080230 30.827 399 220 19 180 549 59 430 5.90e-34 135
MS.gene63435.t1 MTR_5g016260 31.347 386 201 17 188 549 86 431 1.37e-32 132
MS.gene63435.t1 MTR_5g016260 31.347 386 201 17 188 549 86 431 2.75e-32 132
MS.gene63435.t1 MTR_7g021510 28.333 420 219 17 179 555 59 439 1.50e-31 128
MS.gene63435.t1 MTR_5g022880 28.307 378 225 15 190 549 112 461 1.74e-31 128
MS.gene63435.t1 MTR_4g095270 30.233 387 206 17 188 550 78 424 1.88e-31 129
MS.gene63435.t1 MTR_4g095270 30.233 387 206 17 188 550 78 424 2.37e-31 129
MS.gene63435.t1 MTR_7g102750 28.313 332 200 10 186 498 77 389 3.82e-29 120
MS.gene63435.t1 MTR_8g075090 28.613 346 202 13 190 516 112 431 5.07e-28 117
MS.gene63435.t1 MTR_5g080890 27.895 380 231 16 185 549 80 431 1.85e-27 115
MS.gene63435.t1 MTR_5g080960 27.895 380 231 16 185 549 80 431 3.02e-27 114
MS.gene63435.t1 MTR_5g061690 26.700 397 238 15 190 566 101 464 1.67e-26 113
MS.gene63435.t1 MTR_8g075010 25.849 383 228 14 190 549 100 449 5.10e-26 112
MS.gene63435.t1 MTR_8g096990 27.461 386 225 16 184 549 79 429 8.36e-26 110
MS.gene63435.t1 MTR_1g078240 28.606 409 245 17 175 558 52 438 1.30e-25 110
MS.gene63435.t1 MTR_2g059460 24.519 416 256 13 152 549 29 404 1.38e-25 109
MS.gene63435.t1 MTR_5g044770 27.513 378 223 16 189 549 85 428 3.41e-25 108
MS.gene63435.t1 MTR_2g059490 25.935 401 259 12 162 549 33 408 1.99e-24 106
MS.gene63435.t1 MTR_3g028120 24.734 376 247 13 186 549 85 436 2.44e-24 106
MS.gene63435.t1 MTR_1g078240 28.362 409 247 18 175 558 52 439 2.68e-24 106
MS.gene63435.t1 MTR_7g117430 27.202 386 231 18 181 549 132 484 5.42e-24 105
MS.gene63435.t1 MTR_5g008070 27.143 420 241 19 148 549 52 424 1.22e-22 101
MS.gene63435.t1 MTR_8g038310 23.207 474 280 19 93 552 11 414 2.75e-22 99.8
MS.gene63435.t1 MTR_1g078240 30.466 279 170 10 175 434 52 325 7.35e-22 98.2
MS.gene63435.t1 MTR_6g085010 24.933 373 228 16 191 549 157 491 1.09e-21 99.0
MS.gene63435.t1 MTR_4g007740 27.877 391 239 18 174 549 115 477 2.41e-21 97.8
MS.gene63435.t1 MTR_5g008110 27.704 379 225 18 189 549 66 413 2.66e-21 97.1
MS.gene63435.t1 MTR_2g028190 25.323 387 241 12 182 549 94 451 7.10e-21 95.9
MS.gene63435.t1 MTR_5g038360 23.989 371 245 12 191 549 89 434 1.76e-20 94.7
MS.gene63435.t1 MTR_1g115210 25.323 387 234 17 181 549 137 486 7.19e-20 93.2
MS.gene63435.t1 MTR_7g080230 28.531 354 200 17 223 549 33 360 7.41e-20 92.4
MS.gene63435.t1 MTR_4g045857 29.114 237 152 7 180 408 51 279 1.43e-19 89.7
MS.gene63435.t1 MTR_0024s0040 24.933 373 238 13 191 549 64 408 1.49e-19 91.7
MS.gene63435.t1 MTR_0036s0050 26.823 384 219 16 189 549 89 433 2.61e-19 91.3
MS.gene63435.t1 MTR_3g053980 27.056 377 241 13 182 549 134 485 7.40e-19 90.1
MS.gene63435.t1 MTR_5g061690 26.623 308 193 11 266 566 44 325 1.21e-18 88.6
MS.gene63435.t1 MTR_1g111350 24.543 383 238 16 181 549 122 467 1.44e-17 85.9
MS.gene63435.t1 MTR_3g053710 24.096 415 259 16 155 549 88 466 1.68e-17 85.9
MS.gene63435.t1 MTR_5g091130 27.363 402 229 18 182 550 183 554 5.90e-16 81.3
MS.gene63435.t1 MTR_3g046300 25.500 400 236 17 182 549 89 458 1.18e-15 80.1
MS.gene63435.t1 MTR_6g090290 24.582 419 264 17 150 549 49 434 4.79e-15 77.8
MS.gene63435.t1 MTR_5g044570 23.978 367 224 15 191 549 90 409 5.98e-15 77.4
MS.gene63435.t1 MTR_1g039270 23.469 392 236 18 181 549 119 469 6.03e-15 77.8
MS.gene63435.t1 MTR_6g088760 24.359 312 188 12 180 461 78 371 6.57e-15 77.8
MS.gene63435.t1 MTR_4g109760 25.905 359 213 13 209 549 73 396 1.32e-13 73.2
MS.gene63435.t1 MTR_3g068000 23.393 389 249 17 195 554 78 446 3.66e-13 72.4
MS.gene63435.t1 MTR_7g062360 19.750 400 265 14 187 551 49 427 5.03e-12 68.6
MS.gene63435.t1 MTR_5g072060 33.884 121 73 3 265 380 389 507 3.65e-11 66.2
MS.gene63435.t1 MTR_8g103880 24.538 379 226 18 191 549 117 455 3.83e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63435.t1 AT1G49050 49.400 583 251 9 2 555 7 574 0.0 541
MS.gene63435.t1 AT1G49050 60.858 373 139 4 190 555 29 401 9.77e-163 470
MS.gene63435.t1 AT1G49050 45.435 460 209 8 2 434 7 451 9.42e-127 380
MS.gene63435.t1 AT1G77480 45.932 381 190 8 174 549 50 419 1.22e-104 322
MS.gene63435.t1 AT1G77480 45.932 381 190 8 174 549 50 419 6.29e-104 321
MS.gene63435.t1 AT1G44130 42.239 393 206 7 160 549 25 399 1.26e-100 310
MS.gene63435.t1 AT4G33490 41.889 413 224 10 141 549 11 411 3.45e-100 310
MS.gene63435.t1 AT4G33490 40.488 410 223 11 141 546 8 400 7.45e-91 285
MS.gene63435.t1 AT5G43100 32.558 387 212 16 188 558 73 426 2.58e-42 159
MS.gene63435.t1 AT3G02740 31.969 391 224 16 179 549 71 439 8.64e-42 157
MS.gene63435.t1 AT5G43100 32.558 387 212 16 188 558 73 426 1.92e-41 159
MS.gene63435.t1 AT3G02740 31.854 383 221 15 185 549 4 364 3.72e-40 151
MS.gene63435.t1 AT5G22850 28.462 390 244 11 179 549 67 440 5.98e-39 149
MS.gene63435.t1 AT2G36670 28.082 438 262 15 144 551 45 459 1.75e-38 148
MS.gene63435.t1 AT1G65240 30.617 405 229 14 175 555 56 432 2.39e-38 147
MS.gene63435.t1 AT5G36260 30.348 402 229 16 179 555 64 439 9.79e-38 145
MS.gene63435.t1 AT2G36670 27.540 443 263 15 144 551 45 464 6.92e-37 144
MS.gene63435.t1 AT1G08210 28.827 392 241 10 179 551 118 490 7.74e-37 144
MS.gene63435.t1 AT1G08210 28.827 392 241 10 179 551 104 476 7.94e-37 144
MS.gene63435.t1 AT1G08210 28.827 392 241 10 179 551 70 442 8.03e-37 143
MS.gene63435.t1 AT2G36670 29.124 388 230 13 190 555 33 397 2.79e-36 141
MS.gene63435.t1 AT2G36670 29.124 388 230 13 190 555 33 397 2.79e-36 141
MS.gene63435.t1 AT3G50050 31.746 378 211 15 188 549 90 436 8.63e-36 142
MS.gene63435.t1 AT1G05840 30.750 400 221 18 179 549 66 438 9.56e-36 140
MS.gene63435.t1 AT1G08210 27.685 419 238 13 179 551 70 469 1.42e-31 129
MS.gene63435.t1 AT2G17760 27.378 431 253 17 137 549 61 449 3.58e-30 124
MS.gene63435.t1 AT4G35880 27.513 378 224 14 190 549 106 451 6.09e-29 121
MS.gene63435.t1 AT3G25700 24.286 420 278 16 155 552 51 452 1.26e-27 116
MS.gene63435.t1 AT4G35880 27.826 345 204 13 190 516 106 423 1.47e-25 110
MS.gene63435.t1 AT5G10080 26.122 490 299 20 85 549 2 453 4.05e-25 109
MS.gene63435.t1 AT5G10770 26.265 415 255 15 155 549 90 473 5.74e-22 99.8
MS.gene63435.t1 AT2G28010 24.433 397 242 15 165 549 41 391 8.69e-22 98.2
MS.gene63435.t1 AT3G51350 25.131 382 234 14 190 549 101 452 1.13e-21 99.0
MS.gene63435.t1 AT2G23945 29.771 262 156 9 190 437 95 342 1.36e-20 95.1
MS.gene63435.t1 AT2G35615 24.682 393 246 13 182 549 76 443 1.75e-20 94.7
MS.gene63435.t1 AT1G01300 26.098 387 236 18 181 550 132 485 3.68e-20 94.4
MS.gene63435.t1 AT2G28225 26.854 391 216 19 180 549 56 397 4.69e-20 93.2
MS.gene63435.t1 AT1G31450 25.320 391 244 14 182 549 76 441 1.13e-19 92.4
MS.gene63435.t1 AT3G51340 24.538 379 234 15 190 549 102 447 1.31e-19 92.8
MS.gene63435.t1 AT3G20015 24.485 388 236 16 181 549 121 470 3.42e-19 91.3
MS.gene63435.t1 AT4G30030 25.330 379 226 19 191 549 78 419 6.31e-19 89.7
MS.gene63435.t1 AT1G25510 26.582 395 215 21 181 549 138 483 6.68e-19 90.1
MS.gene63435.t1 AT3G51340 23.711 388 238 14 190 549 102 459 7.27e-19 90.5
MS.gene63435.t1 AT3G61820 26.221 389 237 17 181 549 125 483 2.01e-18 89.0
MS.gene63435.t1 AT3G51360 24.227 388 226 17 190 549 4 351 2.67e-18 87.8
MS.gene63435.t1 AT3G18490 25.197 381 241 16 181 549 152 500 3.74e-18 88.2
MS.gene63435.t1 AT3G51360 24.352 386 228 17 190 549 98 445 4.80e-18 87.8
MS.gene63435.t1 AT3G51360 24.352 386 228 17 190 549 88 435 5.25e-18 87.4
MS.gene63435.t1 AT1G64830 23.284 408 268 15 158 549 50 428 5.77e-18 87.0
MS.gene63435.t1 AT2G28220 24.096 415 252 18 152 549 29 397 9.65e-18 85.9
MS.gene63435.t1 AT3G51330 24.806 387 230 16 190 549 101 453 3.36e-17 84.7
MS.gene63435.t1 AT3G51330 24.806 387 230 16 190 549 101 453 5.25e-17 84.7
MS.gene63435.t1 AT2G28030 23.822 382 235 14 180 549 50 387 1.18e-16 82.8
MS.gene63435.t1 AT3G25700 30.723 166 103 6 155 312 51 212 3.00e-16 80.9
MS.gene63435.t1 AT3G51360 27.138 269 148 11 190 435 98 341 3.70e-16 80.5
MS.gene63435.t1 AT3G51340 25.896 251 163 8 190 427 102 342 6.20e-16 80.5
MS.gene63435.t1 AT3G59080 24.874 398 245 16 182 550 161 533 8.71e-16 80.9
MS.gene63435.t1 AT3G51360 30.000 180 109 6 190 358 88 261 1.22e-15 79.7
MS.gene63435.t1 AT3G51360 30.000 180 109 6 190 358 98 271 1.24e-15 79.7
MS.gene63435.t1 AT3G51360 30.000 180 109 6 190 358 98 271 1.29e-15 79.7
MS.gene63435.t1 AT3G51360 30.000 180 109 6 190 358 88 261 1.41e-15 79.7
MS.gene63435.t1 AT3G51340 25.896 251 163 8 190 427 102 342 1.68e-15 79.0
MS.gene63435.t1 AT3G12700 26.740 273 173 10 182 436 97 360 8.51e-15 77.4
MS.gene63435.t1 AT2G42980 24.812 399 246 17 182 550 151 525 9.28e-15 77.4
MS.gene63435.t1 AT5G33340 24.274 379 239 14 189 550 88 435 1.55e-14 76.6
MS.gene63435.t1 AT3G51330 26.087 253 161 9 190 427 101 342 8.14e-14 74.3
MS.gene63435.t1 AT4G12920 24.615 390 244 17 173 551 39 389 2.64e-12 69.3
MS.gene63435.t1 AT5G10760 25.000 384 230 15 182 549 123 464 6.52e-12 68.6
MS.gene63435.t1 AT1G09750 23.342 407 252 16 166 549 79 448 1.91e-11 67.0

Find 118 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAAATTTAACTTGGTTT+TGG 0.209893 6.3:+78864440 None:intergenic
ATGCAGCTTAAAGAAGTTTC+TGG 0.214230 6.3:-78863412 MS.gene63435:intron
GAGAGATTTGAAGCTTAAAT+TGG 0.223650 6.3:-78866576 MS.gene63435:CDS
TTTAAGAAATATGGTGTTCT+TGG 0.252707 6.3:-78866602 MS.gene63435:CDS
ATAGTGAACCATAGAGAAAA+AGG 0.278117 6.3:+78866708 None:intergenic
CCTTCAAATAACCCTTCTTT+AGG 0.280114 6.3:-78866953 MS.gene63435:CDS
TTATACCAAACTGAGATTCT+TGG 0.285575 6.3:-78863644 MS.gene63435:CDS
CTTTATTGCTTCTAGCTCTA+AGG 0.288888 6.3:-78866525 MS.gene63435:CDS
AAAATCCTACTTACGTAGTT+TGG 0.299509 6.3:+78864095 None:intergenic
CATTTCACTGCGAGGACATT+TGG 0.309662 6.3:-78861383 MS.gene63435:CDS
ACCCAAGTCATACCCCAATA+AGG 0.323305 6.3:+78864127 None:intergenic
CTTAAAGAAGTTTCTGGGTT+GGG 0.327554 6.3:-78863406 MS.gene63435:CDS
TTCCTTGGGAGTTCTTATTA+AGG 0.332609 6.3:-78864493 MS.gene63435:CDS
TTCCTCACCTCCAAGTATAA+TGG 0.346694 6.3:+78862798 None:intergenic
AAATTAGCCTGCCAACAAAT+TGG 0.350291 6.3:+78863352 None:intergenic
GTTTGCTTAGCTATCCTTGA+TGG 0.362073 6.3:-78862844 MS.gene63435:CDS
AAAGAAAGTAAAAGCAGTTA+TGG 0.368422 6.3:+78866925 None:intergenic
GGTGGTGGATACATGTTCTT+AGG 0.378570 6.3:-78864163 MS.gene63435:CDS
CTTCATCTTATGACTACTAA+TGG 0.381522 6.3:-78864465 MS.gene63435:CDS
AGAGATTTGAAGCTTAAATT+GGG 0.382803 6.3:-78866575 MS.gene63435:CDS
CTTATCAGTTAGCAAGTAAA+GGG 0.384205 6.3:-78864231 MS.gene63435:CDS
CCCGAAAACAAAATTTAACT+TGG 0.384883 6.3:+78864434 None:intergenic
GGCAGGCTAATTTCCCAATC+AGG 0.386294 6.3:-78863342 MS.gene63435:intron
AAGACATTAACGCTTCGTTT+TGG 0.388373 6.3:-78863032 MS.gene63435:CDS
TGAAGATGTTGTTGAGAAAA+GGG 0.391667 6.3:+78866899 None:intergenic
TCCCTTATTGGGGTATGACT+TGG 0.394100 6.3:-78864129 MS.gene63435:CDS
TTGATGGGTAGGATTGGATT+GGG 0.395110 6.3:+78866816 None:intergenic
TAGGATTGGATTGGGATTGG+TGG 0.396322 6.3:+78866824 None:intergenic
AATGTTGTTGGTCATTGCTT+AGG 0.406763 6.3:-78864199 MS.gene63435:CDS
TGCAGACCATAGTTCTTCCT+TGG 0.408408 6.3:-78864508 MS.gene63435:CDS
ATGAAGATGTTGTTGAGAAA+AGG 0.410877 6.3:+78866898 None:intergenic
CCTAAAGAAGGGTTATTTGA+AGG 0.411690 6.3:+78866953 None:intergenic
GGGCTTATTAAGAATGTTGT+TGG 0.412532 6.3:-78864211 MS.gene63435:CDS
CCTTTACTTGCTAACTGATA+AGG 0.415422 6.3:+78864232 None:intergenic
GGATAAACATTGCCACTGAT+TGG 0.415505 6.3:+78866470 None:intergenic
ACACAACTTTGCCAATTTGT+TGG 0.416557 6.3:-78863363 MS.gene63435:CDS
AATTGAAGCTGAGGGTTTGA+TGG 0.420946 6.3:+78866800 None:intergenic
CCCTTATTGGGGTATGACTT+GGG 0.427356 6.3:-78864128 MS.gene63435:CDS
TGCAGCTTAAAGAAGTTTCT+GGG 0.429338 6.3:-78863411 MS.gene63435:intron
AAGAATGTGAAAAGCTTTGT+TGG 0.436140 6.3:+78866749 None:intergenic
GAGGGTTTGATGGGTAGGAT+TGG 0.440136 6.3:+78866810 None:intergenic
GTCCGTAGACTCTCTATGCT+TGG 0.441887 6.3:-78864598 MS.gene63435:CDS
AAGCTGAGGGTTTGATGGGT+AGG 0.446501 6.3:+78866805 None:intergenic
GGATAGTGTTGGCTTATAGA+TGG 0.447503 6.3:+78864632 None:intergenic
AACTTTGCCAATTTGTTGGC+AGG 0.453572 6.3:-78863359 MS.gene63435:CDS
TTAAAGAAGTTTCTGGGTTG+GGG 0.458580 6.3:-78863405 MS.gene63435:CDS
GACAATGTGAACAAGAATAT+TGG 0.459509 6.3:-78861352 MS.gene63435:CDS
TTTGATGGAAACAGCAAAGT+AGG 0.459859 6.3:-78863593 MS.gene63435:CDS
TTATTCCAAGAATCTCAGTT+TGG 0.460107 6.3:+78863639 None:intergenic
CTGATAAGGTAGGCCAACTT+TGG 0.461547 6.3:+78864246 None:intergenic
CCTTATCAGTTAGCAAGTAA+AGG 0.465935 6.3:-78864232 MS.gene63435:CDS
ACATCAACAAAATATCGTTT+CGG 0.467089 6.3:+78865251 None:intergenic
AGAATGTGAAAAGCTTTGTT+GGG 0.469606 6.3:+78866750 None:intergenic
GGGTATGACTTGGGTACCTA+TGG 0.473246 6.3:-78864119 MS.gene63435:CDS
GTTCAGAAATATGAGAAGAA+TGG 0.474815 6.3:-78864573 MS.gene63435:CDS
GCAGACCATAGTTCTTCCTT+GGG 0.478129 6.3:-78864507 MS.gene63435:CDS
GGAAATGATGGAGTTGGTGG+TGG 0.479851 6.3:-78864178 MS.gene63435:CDS
ATTGAAGCTGAGGGTTTGAT+GGG 0.481433 6.3:+78866801 None:intergenic
GGGTAGGATTGGATTGGGAT+TGG 0.484407 6.3:+78866821 None:intergenic
TTTGATGGGTAGGATTGGAT+TGG 0.487035 6.3:+78866815 None:intergenic
GATGGATCCTCCATTATACT+TGG 0.487511 6.3:-78862808 MS.gene63435:CDS
GAACTCCCAAGGAAGAACTA+TGG 0.493905 6.3:+78864502 None:intergenic
TCACAGAAGCAACGAGATCC+AGG 0.495496 6.3:+78863516 None:intergenic
ATACAGGGAGTGACTTAACT+TGG 0.496915 6.3:-78865226 MS.gene63435:CDS
CCCAAGTCATACCCCAATAA+GGG 0.497768 6.3:+78864128 None:intergenic
TGAGCCTTCAATATTCTGCT+TGG 0.499739 6.3:+78861304 None:intergenic
AGTGGCAATGTTTATCCAGA+TGG 0.500980 6.3:-78866464 MS.gene63435:CDS
CTGAATGAAAATTGAAGCTG+AGG 0.511044 6.3:+78866791 None:intergenic
GCTTAAAGAAGTTTCTGGGT+TGG 0.511973 6.3:-78863407 MS.gene63435:CDS
CATGCCAAGCAGAATATTGA+AGG 0.517254 6.3:-78861308 MS.gene63435:CDS
AGATCCAGGTACGCTTCTCT+CGG 0.520279 6.3:+78863530 None:intergenic
TGTGAACAAGAATATTGGTT+GGG 0.525910 6.3:-78861347 MS.gene63435:CDS
GTCTACGGACGGCACTATGT+TGG 0.530173 6.3:+78864611 None:intergenic
ACTTACGTAGTTTGGACCAT+AGG 0.531182 6.3:+78864103 None:intergenic
CATTAACATTGCTACCATCA+AGG 0.531579 6.3:+78862830 None:intergenic
GGTCATTGCTTAGGAAATGA+TGG 0.538019 6.3:-78864190 MS.gene63435:CDS
GGCACTATGTTGGATAGTGT+TGG 0.538557 6.3:+78864621 None:intergenic
GATGGTAGCAATGTTAATGA+TGG 0.544025 6.3:-78862826 MS.gene63435:CDS
GAGATTCTTGGAATAAACTA+CGG 0.544989 6.3:-78863632 MS.gene63435:CDS
GGATCCTCCATTATACTTGG+AGG 0.544998 6.3:-78862805 MS.gene63435:intron
TTCCAAGCATAGAGAGTCTA+CGG 0.545279 6.3:+78864596 None:intergenic
AGTGGAAGCAGAAAGCTACT+TGG 0.549739 6.3:+78866626 None:intergenic
GAATTTCATAGTCACACTGT+TGG 0.552253 6.3:+78864535 None:intergenic
TGCTTAGGAAATGATGGAGT+TGG 0.560007 6.3:-78864184 MS.gene63435:CDS
ACCTTTGCACAACTTCTGCA+CGG 0.572104 6.3:+78865188 None:intergenic
CGTGGTCTCAAGAACAATGA+TGG 0.573871 6.3:-78866659 MS.gene63435:CDS
CAGATCTGTCAAAGATGTCA+AGG 0.575041 6.3:-78863063 MS.gene63435:CDS
CACATTGTTTCGGATACCGC+CGG 0.575499 6.3:-78862988 MS.gene63435:CDS
CAACAAAATATCGTTTCGGA+GGG 0.579679 6.3:+78865255 None:intergenic
AAAGAAGGGTTATTTGAAGG+TGG 0.579906 6.3:+78866956 None:intergenic
ACTTCTATGCTGCAGAACAA+AGG 0.581078 6.3:-78862871 MS.gene63435:intron
TCAACAAAATATCGTTTCGG+AGG 0.581579 6.3:+78865254 None:intergenic
GTGGCAATGTTTATCCAGAT+GGG 0.582598 6.3:-78866463 MS.gene63435:intron
ATCCTTAATAAGAACTCCCA+AGG 0.586872 6.3:+78864491 None:intergenic
TGAATGAAAATTGAAGCTGA+GGG 0.587253 6.3:+78866792 None:intergenic
GAAGATGTTGTTGAGAAAAG+GGG 0.589306 6.3:+78866900 None:intergenic
GAGATTTGAAGCTTAAATTG+GGG 0.590586 6.3:-78866574 MS.gene63435:CDS
TTAGGAAATGATGGAGTTGG+TGG 0.594117 6.3:-78864181 MS.gene63435:CDS
TATTACACGCATTTACGTGT+CGG 0.598280 6.3:-78865281 MS.gene63435:CDS
GGACTGAACAGAGCCAAAGT+TGG 0.599403 6.3:-78864259 MS.gene63435:CDS
ACAAATTGGCAAAGTTGTGT+CGG 0.602194 6.3:+78863366 None:intergenic
CTAATGATCAAGTAACCCTC+CGG 0.605725 6.3:+78862969 None:intergenic
TGGAAACAGCAAAGTAGGAA+AGG 0.607216 6.3:-78863588 MS.gene63435:CDS
ATGTGAACAAGAATATTGGT+TGG 0.608253 6.3:-78861348 MS.gene63435:CDS
TTGTTTCGGATACCGCCGGA+GGG 0.622458 6.3:-78862984 MS.gene63435:CDS
CTCACCTCCAAGTATAATGG+AGG 0.623202 6.3:+78862801 None:intergenic
ATTGTTTCGGATACCGCCGG+AGG 0.628153 6.3:-78862985 MS.gene63435:CDS
CGGCGGTATCCGAAACAATG+TGG 0.662699 6.3:+78862989 None:intergenic
AAGGTGTGGATATGATCAAG+AGG 0.664812 6.3:-78864323 MS.gene63435:CDS
TCCGTGCAGAAGTTGTGCAA+AGG 0.670250 6.3:-78865189 MS.gene63435:intron
AAGCATAGAGAGTCTACGGA+CGG 0.675187 6.3:+78864600 None:intergenic
AGGTGTGGATATGATCAAGA+GGG 0.680410 6.3:-78864322 MS.gene63435:CDS
GGTTGGGAGAGAACAAAATG+TGG 0.685023 6.3:-78861331 MS.gene63435:CDS
GAATGTGAAAAGCTTTGTTG+GGG 0.703440 6.3:+78866751 None:intergenic
TACTTGCTAACTGATAAGGT+AGG 0.706815 6.3:+78864236 None:intergenic
TTTGCAGACATTTCACTGCG+AGG 0.713408 6.3:-78861391 MS.gene63435:intron
ATGATCAAGTAACCCTCCGG+CGG 0.715949 6.3:+78862972 None:intergenic
ACAACATTACTTGAACTACG+TGG 0.776086 6.3:-78866677 MS.gene63435:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATTAGAAACATTTAA+TGG - chr6.3:78865915-78865934 MS.gene63435:intron 10.0%
!!! TTATATCTATAAATTTTTCT+AGG - chr6.3:78865026-78865045 MS.gene63435:intron 10.0%
!!! TTCCAATTATTTTTAAATTA+CGG - chr6.3:78862484-78862503 MS.gene63435:intron 10.0%
!!! TTTTTTAAGCTAATAAAAAA+AGG - chr6.3:78866457-78866476 MS.gene63435:intron 10.0%
!! AATTATATATATCTTGTGTA+AGG - chr6.3:78863377-78863396 MS.gene63435:CDS 15.0%
!! ATCCGTAATTTAAAAATAAT+TGG + chr6.3:78862489-78862508 None:intergenic 15.0%
!! ATTATATATATCTTGTGTAA+GGG - chr6.3:78863378-78863397 MS.gene63435:CDS 15.0%
!! TAAAAATAATTGGAAAATCT+TGG + chr6.3:78862479-78862498 None:intergenic 15.0%
!! TAAATCAAAAAAATTGTTAG+TGG - chr6.3:78866360-78866379 MS.gene63435:intron 15.0%
!!! AGTTATTTTACATTAAGATT+TGG - chr6.3:78865727-78865746 MS.gene63435:intron 15.0%
!!! CTGATTTCATTTTTTTTTTA+AGG + chr6.3:78866043-78866062 None:intergenic 15.0%
!!! GGTAAGTTTTTATTAAAAAA+TGG - chr6.3:78863259-78863278 MS.gene63435:intron 15.0%
!!! TGTAATTTTTATTATATCAG+TGG - chr6.3:78864368-78864387 MS.gene63435:intron 15.0%
!! AAAAGTTGTATTAGAAAAAG+AGG + chr6.3:78865346-78865365 None:intergenic 20.0%
!! AAAGATTAGAAATGGTTTAT+TGG - chr6.3:78862012-78862031 MS.gene63435:intron 20.0%
!! AATGAATTCATATTCAACAT+TGG + chr6.3:78864839-78864858 None:intergenic 20.0%
!! AATGCAATTGAATATTTGAA+GGG - chr6.3:78862627-78862646 MS.gene63435:intron 20.0%
!! AATTGTGTTGGAAATATAAA+CGG + chr6.3:78863311-78863330 None:intergenic 20.0%
!! ATATGTCTCATTTCAAATTA+GGG + chr6.3:78866117-78866136 None:intergenic 20.0%
!! ATTCATCAACATAAAAAACT+TGG + chr6.3:78865546-78865565 None:intergenic 20.0%
!! GTATATTGGATATCAATTAA+TGG - chr6.3:78866328-78866347 MS.gene63435:intron 20.0%
!! TATATGTCTCATTTCAAATT+AGG + chr6.3:78866118-78866137 None:intergenic 20.0%
!! TGATCTAAATATTATTGAGT+TGG - chr6.3:78862268-78862287 MS.gene63435:intron 20.0%
!! TTGAGAAATCTACAATATAA+CGG - chr6.3:78864260-78864279 MS.gene63435:CDS 20.0%
!! TTTAAGCTAATAAAAAAAGG+CGG - chr6.3:78866460-78866479 MS.gene63435:intron 20.0%
!!! AACAAAATTTAACTTGGTTT+TGG + chr6.3:78863846-78863865 None:intergenic 20.0%
!!! AAGTTTTTTATGTTGATGAA+TGG - chr6.3:78865545-78865564 MS.gene63435:intron 20.0%
!!! ACCAAGTTAAATTTTGTTTT+CGG - chr6.3:78863848-78863867 MS.gene63435:intron 20.0%
!!! ATAGTTTTAAGAATCAATGT+TGG + chr6.3:78864449-78864468 None:intergenic 20.0%
!!! CACTACTTGTATTTTTTAAA+AGG - chr6.3:78863189-78863208 MS.gene63435:intron 20.0%
!!! TGCTTATATTTGACTTAATT+TGG - chr6.3:78861865-78861884 MS.gene63435:intron 20.0%
! AAACTTGGATAAAAACTAGA+AGG + chr6.3:78865531-78865550 None:intergenic 25.0%
! AAAGAAAGTAAAAGCAGTTA+TGG + chr6.3:78861361-78861380 None:intergenic 25.0%
! ACACCATATTTCTTAAAAAG+TGG + chr6.3:78861678-78861697 None:intergenic 25.0%
! ACATCAACAAAATATCGTTT+CGG + chr6.3:78863035-78863054 None:intergenic 25.0%
! ACTCGAGATATAATTGATAT+AGG - chr6.3:78863619-78863638 MS.gene63435:CDS 25.0%
! ATACTACGAAAGATTAGAAA+TGG - chr6.3:78862004-78862023 MS.gene63435:intron 25.0%
! ATACTCCAACTATATGATAT+AGG - chr6.3:78862894-78862913 MS.gene63435:intron 25.0%
! CAAAAGTAGAAAAATTGTGT+TGG + chr6.3:78863323-78863342 None:intergenic 25.0%
! CAATGCAATTGAATATTTGA+AGG - chr6.3:78862626-78862645 MS.gene63435:intron 25.0%
! CTCGAGATATAATTGATATA+GGG - chr6.3:78863620-78863639 MS.gene63435:CDS 25.0%
! GAACAAAAATCATTTGGAAA+TGG + chr6.3:78865373-78865392 None:intergenic 25.0%
! GAGAATACTAAATGAAAATG+TGG - chr6.3:78866685-78866704 MS.gene63435:CDS 25.0%
! GTATAAAAGAATCAAGAGTT+AGG + chr6.3:78865822-78865841 None:intergenic 25.0%
! TAGTTCCTATATCATATAGT+TGG + chr6.3:78862902-78862921 None:intergenic 25.0%
! TATAAAGCTATAGTAATGTG+CGG + chr6.3:78863449-78863468 None:intergenic 25.0%
! TCAAAAACTGTACTGTAATT+AGG - chr6.3:78862598-78862617 MS.gene63435:intron 25.0%
! TCATTTAGTATTCTCTCTAT+AGG + chr6.3:78866680-78866699 None:intergenic 25.0%
! TCTATAAGAAAACTGAGATT+GGG - chr6.3:78862394-78862413 MS.gene63435:intron 25.0%
! TCTCATAAAATTCACTTACA+TGG + chr6.3:78863583-78863602 None:intergenic 25.0%
! TCTGACAAAAATTATGCAAT+TGG - chr6.3:78864799-78864818 MS.gene63435:intron 25.0%
! TTAAGCTAATAAAAAAAGGC+GGG - chr6.3:78866461-78866480 MS.gene63435:intron 25.0%
! TTATCAAAACAGAGAAAAAC+TGG - chr6.3:78865173-78865192 MS.gene63435:intron 25.0%
! TTCCAAGAACAAAAATCATT+TGG + chr6.3:78865379-78865398 None:intergenic 25.0%
! TTTAAGAAATATGGTGTTCT+TGG - chr6.3:78861681-78861700 MS.gene63435:intron 25.0%
! TTTATGATAGAACATTGTAG+CGG - chr6.3:78862303-78862322 MS.gene63435:intron 25.0%
!! AAATGATTTTTGTTCTTGGA+AGG - chr6.3:78865378-78865397 MS.gene63435:intron 25.0%
!! AAGCCTTATATCACTAAATA+GGG + chr6.3:78862349-78862368 None:intergenic 25.0%
!! AGAGATTTGAAGCTTAAATT+GGG - chr6.3:78861708-78861727 MS.gene63435:intron 25.0%
!! CAACACAATTTTTCTACTTT+TGG - chr6.3:78863321-78863340 MS.gene63435:intron 25.0%
!! GGTGTAAAACTATTTTACAT+CGG - chr6.3:78862554-78862573 MS.gene63435:intron 25.0%
!! TTCCAAATGATTTTTGTTCT+TGG - chr6.3:78865374-78865393 MS.gene63435:intron 25.0%
!! TTTTAAATTACGGATACAGA+TGG - chr6.3:78862494-78862513 MS.gene63435:intron 25.0%
!! TTTTATATTTAAGGACTAGG+TGG - chr6.3:78862690-78862709 MS.gene63435:intron 25.0%
!!! ATAATGTGATAGTGGTATAT+TGG - chr6.3:78866314-78866333 MS.gene63435:intron 25.0%
!!! ATGCTTTATACACTCTTTTT+TGG - chr6.3:78865610-78865629 MS.gene63435:intron 25.0%
!!! CATACAAGTTTTATAACTCT+AGG - chr6.3:78862782-78862801 MS.gene63435:intron 25.0%
!!! CCAAGTTAAATTTTGTTTTC+GGG - chr6.3:78863849-78863868 MS.gene63435:intron 25.0%
!!! CGGGTATATATTTTTTTGAA+TGG - chr6.3:78865865-78865884 MS.gene63435:intron 25.0%
!!! CTAAAGTAACTTCTGTTTTT+AGG - chr6.3:78864295-78864314 MS.gene63435:CDS 25.0%
!!! CTTCCACTTTTTAAGAAATA+TGG - chr6.3:78861672-78861691 MS.gene63435:intron 25.0%
!!! TACTATAGCTTTATAGAATC+AGG - chr6.3:78863454-78863473 MS.gene63435:intron 25.0%
!!! TTATGGTTTTACCTAAAGAA+GGG + chr6.3:78861344-78861363 None:intergenic 25.0%
!!! TTTCCCTTTTTTGTTGTTAT+CGG - chr6.3:78861917-78861936 MS.gene63435:intron 25.0%
AAAAATTGTTAGTGGCTTAG+TGG - chr6.3:78866368-78866387 MS.gene63435:intron 30.0%
AAAAGTTCAGTCATGCATTA+AGG - chr6.3:78866205-78866224 MS.gene63435:intron 30.0%
AAAATCCTACTTACGTAGTT+TGG + chr6.3:78864191-78864210 None:intergenic 30.0%
AATAAAAAAAGGCGGGATTA+GGG - chr6.3:78866468-78866487 MS.gene63435:CDS 30.0%
AGAAATGGTTTATTGGTCAT+AGG - chr6.3:78862019-78862038 MS.gene63435:intron 30.0%
AGCACCTATAGTAAAATAGA+CGG - chr6.3:78862095-78862114 MS.gene63435:intron 30.0%
ATAGTGAACCATAGAGAAAA+AGG + chr6.3:78861578-78861597 None:intergenic 30.0%
ATATCAGTGGAAATGAAAAC+AGG - chr6.3:78864381-78864400 MS.gene63435:intron 30.0%
ATGAAGATGTTGTTGAGAAA+AGG + chr6.3:78861388-78861407 None:intergenic 30.0%
ATGTCGCAAATTAGAAACTA+AGG + chr6.3:78866794-78866813 None:intergenic 30.0%
ATGTGAACAAGAATATTGGT+TGG - chr6.3:78866935-78866954 MS.gene63435:CDS 30.0%
ATTGGTTAAGCATCTAAAAG+AGG - chr6.3:78863238-78863257 MS.gene63435:intron 30.0%
CAATGATGCATATGTAATAC+AGG + chr6.3:78862947-78862966 None:intergenic 30.0%
CAATGTTGGTATTCTCAAAT+TGG + chr6.3:78864435-78864454 None:intergenic 30.0%
CAGCATAGAAGTTTATTAGA+AGG + chr6.3:78865404-78865423 None:intergenic 30.0%
CCCGAAAACAAAATTTAACT+TGG + chr6.3:78863852-78863871 None:intergenic 30.0%
CTTATATCACTAAATAGGGT+CGG + chr6.3:78862345-78862364 None:intergenic 30.0%
CTTATCAGTTAGCAAGTAAA+GGG - chr6.3:78864052-78864071 MS.gene63435:intron 30.0%
CTTATTAATATCTACCCACA+CGG + chr6.3:78866277-78866296 None:intergenic 30.0%
CTTCATCTTATGACTACTAA+TGG - chr6.3:78863818-78863837 MS.gene63435:intron 30.0%
CTTGATGCTTTCTTATATTC+CGG - chr6.3:78866731-78866750 MS.gene63435:CDS 30.0%
GACAATGTGAACAAGAATAT+TGG - chr6.3:78866931-78866950 MS.gene63435:CDS 30.0%
GAGATTCTTGGAATAAACTA+CGG - chr6.3:78864651-78864670 MS.gene63435:intron 30.0%
GATCCGATAACAACAAAAAA+GGG + chr6.3:78861923-78861942 None:intergenic 30.0%
GCAATATCATGAATTCTCAT+TGG - chr6.3:78862526-78862545 MS.gene63435:intron 30.0%
GCATATGTAATACAGGAAAT+TGG + chr6.3:78862940-78862959 None:intergenic 30.0%
GTATTCTCAAATTGGAGTTT+AGG + chr6.3:78864427-78864446 None:intergenic 30.0%
GTCTATAAGAAAACTGAGAT+TGG - chr6.3:78862393-78862412 MS.gene63435:intron 30.0%
GTTCAGAAATATGAGAAGAA+TGG - chr6.3:78863710-78863729 MS.gene63435:intron 30.0%
TAAATAACTCAGCTAGGATT+AGG - chr6.3:78865644-78865663 MS.gene63435:intron 30.0%
TAATAAAAAAAGGCGGGATT+AGG - chr6.3:78866467-78866486 MS.gene63435:CDS 30.0%
TAGTGAACCATAGAGAAAAA+GGG + chr6.3:78861577-78861596 None:intergenic 30.0%
TCATATTCAACATTGGACTT+TGG + chr6.3:78864832-78864851 None:intergenic 30.0%
TGAAGATGTTGTTGAGAAAA+GGG + chr6.3:78861387-78861406 None:intergenic 30.0%
TGAATGAAAATTGAAGCTGA+GGG + chr6.3:78861494-78861513 None:intergenic 30.0%
TGTGGGTAGATATTAATAAG+TGG - chr6.3:78866277-78866296 MS.gene63435:intron 30.0%
TTACATATGCATCATTGTGT+TGG - chr6.3:78862950-78862969 MS.gene63435:intron 30.0%
TTATACCAAACTGAGATTCT+TGG - chr6.3:78864639-78864658 MS.gene63435:CDS 30.0%
TTATTCCAAGAATCTCAGTT+TGG + chr6.3:78864647-78864666 None:intergenic 30.0%
! AAGAATGTGAAAAGCTTTGT+TGG + chr6.3:78861537-78861556 None:intergenic 30.0%
! AATAAGTGGTTAGTCAGTTA+CGG - chr6.3:78866291-78866310 MS.gene63435:intron 30.0%
! ACAAAGCTTTTCACATTCTT+TGG - chr6.3:78861537-78861556 MS.gene63435:intron 30.0%
! AGTGAAAGCATAATGACTAA+TGG + chr6.3:78863173-78863192 None:intergenic 30.0%
! AGTTTTACACTGAGTCTAAT+GGG - chr6.3:78862450-78862469 MS.gene63435:intron 30.0%
! ATTTTGTTGATGTGGATACA+GGG - chr6.3:78863042-78863061 MS.gene63435:CDS 30.0%
! CAAGCCTTATATCACTAAAT+AGG + chr6.3:78862350-78862369 None:intergenic 30.0%
! GAAACGATATTTTGTTGATG+TGG - chr6.3:78863034-78863053 MS.gene63435:CDS 30.0%
! GAGAGATTTGAAGCTTAAAT+TGG - chr6.3:78861707-78861726 MS.gene63435:intron 30.0%
! GAGATTTGAAGCTTAAATTG+GGG - chr6.3:78861709-78861728 MS.gene63435:intron 30.0%
! GTTTCTCTGATAGTTTTTCT+AGG + chr6.3:78862239-78862258 None:intergenic 30.0%
! TAGGTCATTAAGTGTTATTG+AGG - chr6.3:78865663-78865682 MS.gene63435:intron 30.0%
! TATTTTGTTGATGTGGATAC+AGG - chr6.3:78863041-78863060 MS.gene63435:CDS 30.0%
! TGATGATTTTGTCCCTTATT+GGG - chr6.3:78864143-78864162 MS.gene63435:CDS 30.0%
! TGTGAACAAGAATATTGGTT+GGG - chr6.3:78866936-78866955 MS.gene63435:CDS 30.0%
! TGTTGATAAATAACTCAGCT+AGG - chr6.3:78865638-78865657 MS.gene63435:intron 30.0%
!! AGAATGTGAAAAGCTTTGTT+GGG + chr6.3:78861536-78861555 None:intergenic 30.0%
!! CTTGTTATTTGTTGTTTCTG+AGG - chr6.3:78864559-78864578 MS.gene63435:CDS 30.0%
!! GGGTTTTATATTTAAGGACT+AGG - chr6.3:78862687-78862706 MS.gene63435:intron 30.0%
!! GTTATGGTTTTACCTAAAGA+AGG + chr6.3:78861345-78861364 None:intergenic 30.0%
!! GTTGATAATAATAACCGTGT+GGG - chr6.3:78866260-78866279 MS.gene63435:intron 30.0%
!! TAGTTTTACACTGAGTCTAA+TGG - chr6.3:78862449-78862468 MS.gene63435:intron 30.0%
!! TATTGAGTTGGATCGAAATA+TGG - chr6.3:78862280-78862299 MS.gene63435:intron 30.0%
!! TGTTGATAATAATAACCGTG+TGG - chr6.3:78866259-78866278 MS.gene63435:intron 30.0%
!! TTGAAGGGTGTCTTAAAAAA+GGG - chr6.3:78862642-78862661 MS.gene63435:intron 30.0%
!! TTTGAAGGGTGTCTTAAAAA+AGG - chr6.3:78862641-78862660 MS.gene63435:intron 30.0%
!! TTTTTCTACTTTTGGATTCC+TGG - chr6.3:78863329-78863348 MS.gene63435:intron 30.0%
!!! ATAACAACACTTTTGAGTTG+TGG + chr6.3:78861297-78861316 None:intergenic 30.0%
!!! GGCAAGTTTTTGTTTTGAAT+TGG - chr6.3:78862858-78862877 MS.gene63435:CDS 30.0%
!!! GTATTTGGTTTTTGTAATGC+TGG - chr6.3:78864992-78865011 MS.gene63435:intron 30.0%
!!! GTTTTATAACTCTAGGATTG+AGG - chr6.3:78862789-78862808 MS.gene63435:intron 30.0%
!!! TGCTGTCTTTTTTTCTCATA+AGG - chr6.3:78863887-78863906 MS.gene63435:intron 30.0%
AAACTGGGTTTAAGTGGTTT+GGG - chr6.3:78862121-78862140 MS.gene63435:intron 35.0%
AAAGAAGGGTTATTTGAAGG+TGG + chr6.3:78861330-78861349 None:intergenic 35.0%
AACACATTGGCAAAAACAGA+TGG - chr6.3:78863994-78864013 MS.gene63435:intron 35.0%
AATCAGGTAAAAGAAATCGC+TGG - chr6.3:78864957-78864976 MS.gene63435:intron 35.0%
AATGTTGTTGGTCATTGCTT+AGG - chr6.3:78864084-78864103 MS.gene63435:intron 35.0%
ACAAATTGGCAAAGTTGTGT+CGG + chr6.3:78864920-78864939 None:intergenic 35.0%
ACAACATTACTTGAACTACG+TGG - chr6.3:78861606-78861625 MS.gene63435:intron 35.0%
ACACAACTTTGCCAATTTGT+TGG - chr6.3:78864920-78864939 MS.gene63435:intron 35.0%
ACCTATAGTAAAATAGACGG+TGG - chr6.3:78862098-78862117 MS.gene63435:intron 35.0%
AGATCTGCATGCATATAACA+CGG + chr6.3:78865207-78865226 None:intergenic 35.0%
AGTTACGGATAATGTGATAG+TGG - chr6.3:78866306-78866325 MS.gene63435:intron 35.0%
ATAGGTTCAAATATCCTCCA+TGG - chr6.3:78862820-78862839 MS.gene63435:CDS 35.0%
ATCCTTAATAAGAACTCCCA+AGG + chr6.3:78863795-78863814 None:intergenic 35.0%
ATGCAGCTTAAAGAAGTTTC+TGG - chr6.3:78864871-78864890 MS.gene63435:intron 35.0%
CAACAAAATATCGTTTCGGA+GGG + chr6.3:78863031-78863050 None:intergenic 35.0%
CAGGAAACAGATGAAGTAAT+CGG - chr6.3:78864400-78864419 MS.gene63435:intron 35.0%
CATGAATTCTCATTGGATGT+CGG - chr6.3:78862533-78862552 MS.gene63435:intron 35.0%
CATTAACATTGCTACCATCA+AGG + chr6.3:78865456-78865475 None:intergenic 35.0%
CCTAAAGAAGGGTTATTTGA+AGG + chr6.3:78861333-78861352 None:intergenic 35.0%
CCTTATCAGTTAGCAAGTAA+AGG - chr6.3:78864051-78864070 MS.gene63435:intron 35.0%
CCTTCAAATAACCCTTCTTT+AGG - chr6.3:78861330-78861349 MS.gene63435:CDS 35.0%
CGACCCTATTTAGTGATATA+AGG - chr6.3:78862343-78862362 MS.gene63435:intron 35.0%
CGATCCGATAACAACAAAAA+AGG + chr6.3:78861924-78861943 None:intergenic 35.0%
CTCCATGGTAAACAAAGAAA+GGG - chr6.3:78862835-78862854 MS.gene63435:CDS 35.0%
CTGAATGAAAATTGAAGCTG+AGG + chr6.3:78861495-78861514 None:intergenic 35.0%
GAAGATGTTGTTGAGAAAAG+GGG + chr6.3:78861386-78861405 None:intergenic 35.0%
GAATTTCATAGTCACACTGT+TGG + chr6.3:78863751-78863770 None:intergenic 35.0%
GATGGTAGCAATGTTAATGA+TGG - chr6.3:78865457-78865476 MS.gene63435:intron 35.0%
GCAAAAACAGATGGAATCAT+GGG - chr6.3:78864003-78864022 MS.gene63435:intron 35.0%
GCATAATGACTAATGGTTTC+TGG + chr6.3:78863166-78863185 None:intergenic 35.0%
GGGCTTATTAAGAATGTTGT+TGG - chr6.3:78864072-78864091 MS.gene63435:intron 35.0%
GTCAAACCATACTTATCTTC+CGG - chr6.3:78866588-78866607 MS.gene63435:CDS 35.0%
TAAAATAGACGGTGGAAACT+GGG - chr6.3:78862106-78862125 MS.gene63435:intron 35.0%
TAATCCATCTCAATATGCAG+AGG + chr6.3:78863139-78863158 None:intergenic 35.0%
TATCTTGTGTAAGGGTAAAG+TGG - chr6.3:78863386-78863405 MS.gene63435:CDS 35.0%
TATTACACGCATTTACGTGT+CGG - chr6.3:78863002-78863021 MS.gene63435:CDS 35.0%
TCAACAAAATATCGTTTCGG+AGG + chr6.3:78863032-78863051 None:intergenic 35.0%
TCAGATGACTCAGATCATTA+GGG - chr6.3:78862202-78862221 MS.gene63435:intron 35.0%
TCCATGGTAAACAAAGAAAG+GGG - chr6.3:78862836-78862855 MS.gene63435:CDS 35.0%
TGCAGCTTAAAGAAGTTTCT+GGG - chr6.3:78864872-78864891 MS.gene63435:intron 35.0%
TGGAGGTGAAATTCAGTATT+TGG - chr6.3:78864977-78864996 MS.gene63435:intron 35.0%
TTCCTTGGGAGTTCTTATTA+AGG - chr6.3:78863790-78863809 MS.gene63435:intron 35.0%
TTGGTCATAGGAAAACTAGA+CGG - chr6.3:78862031-78862050 MS.gene63435:intron 35.0%
TTTGATGGAAACAGCAAAGT+AGG - chr6.3:78864690-78864709 MS.gene63435:intron 35.0%
! AAATTAGCCTGCCAACAAAT+TGG + chr6.3:78864934-78864953 None:intergenic 35.0%
! AAGACATTAACGCTTCGTTT+TGG - chr6.3:78865251-78865270 MS.gene63435:CDS 35.0%
! AGCGATTTCTTTTACCTGAT+TGG + chr6.3:78864958-78864977 None:intergenic 35.0%
! AGTTGGAGTATCTTAGTTCT+AGG + chr6.3:78862885-78862904 None:intergenic 35.0%
! CCTTTACTTGCTAACTGATA+AGG + chr6.3:78864054-78864073 None:intergenic 35.0%
! CGATTTTTAACATACCCATC+TGG + chr6.3:78861837-78861856 None:intergenic 35.0%
! CTTAAAGAAGTTTCTGGGTT+GGG - chr6.3:78864877-78864896 MS.gene63435:intron 35.0%
! GATGATTTTGTCCCTTATTG+GGG - chr6.3:78864144-78864163 MS.gene63435:CDS 35.0%
! GCGATTTCTTTTACCTGATT+GGG + chr6.3:78864957-78864976 None:intergenic 35.0%
! GGAAAGGTGATTTTTGATAG+TGG - chr6.3:78864711-78864730 MS.gene63435:intron 35.0%
! GGATTTTGTCCACATTGTTT+CGG - chr6.3:78865285-78865304 MS.gene63435:CDS 35.0%
! GTGATGATTTTGTCCCTTAT+TGG - chr6.3:78864142-78864161 MS.gene63435:CDS 35.0%
! TACTTGCTAACTGATAAGGT+AGG + chr6.3:78864050-78864069 None:intergenic 35.0%
! TCCACCGTCTATTTTACTAT+AGG + chr6.3:78862102-78862121 None:intergenic 35.0%
! TTAAAGAAGTTTCTGGGTTG+GGG - chr6.3:78864878-78864897 MS.gene63435:intron 35.0%
!! AATCGTCTTCTCAGTTTTGA+TGG - chr6.3:78864675-78864694 MS.gene63435:intron 35.0%
!! ATTGGTGGATCATTGTTTTG+AGG + chr6.3:78861447-78861466 None:intergenic 35.0%
!! CTTTATTGCTTCTAGCTCTA+AGG - chr6.3:78861758-78861777 MS.gene63435:intron 35.0%
!! GAATGTGAAAAGCTTTGTTG+GGG + chr6.3:78861535-78861554 None:intergenic 35.0%
!! TCGCGAGGGTTTTATATTTA+AGG - chr6.3:78862681-78862700 MS.gene63435:intron 35.0%
!! TGAAGGGTGTCTTAAAAAAG+GGG - chr6.3:78862643-78862662 MS.gene63435:intron 35.0%
!!! GACAAGAATTTTTTTCGCGA+GGG - chr6.3:78862667-78862686 MS.gene63435:intron 35.0%
!!! TTCGTTTTGGAAACAAATGG+TGG - chr6.3:78865264-78865283 MS.gene63435:CDS 35.0%
AAAACTGAGATTGGGTCACT+CGG - chr6.3:78862402-78862421 MS.gene63435:intron 40.0%
AACATCCACATCGTGTAGAA+TGG + chr6.3:78863938-78863957 None:intergenic 40.0%
AAGGTGTGGATATGATCAAG+AGG - chr6.3:78863960-78863979 MS.gene63435:intron 40.0%
AAGTGCTCCAAACAGAATGT+TGG + chr6.3:78864542-78864561 None:intergenic 40.0%
AATTGAAGCTGAGGGTTTGA+TGG + chr6.3:78861486-78861505 None:intergenic 40.0%
ACTTACGTAGTTTGGACCAT+AGG + chr6.3:78864183-78864202 None:intergenic 40.0%
ACTTCTATGCTGCAGAACAA+AGG - chr6.3:78865412-78865431 MS.gene63435:intron 40.0%
AGGATTGAGGTCATACTCAT+AGG - chr6.3:78862802-78862821 MS.gene63435:intron 40.0%
AGGTGTGGATATGATCAAGA+GGG - chr6.3:78863961-78863980 MS.gene63435:intron 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr6.3:78862172-78862191 MS.gene63435:intron 40.0%
AGTGGCAATGTTTATCCAGA+TGG - chr6.3:78861819-78861838 MS.gene63435:intron 40.0%
ATACAGGGAGTGACTTAACT+TGG - chr6.3:78863057-78863076 MS.gene63435:CDS 40.0%
ATACTGATGCACTACAGTGT+AGG + chr6.3:78862762-78862781 None:intergenic 40.0%
ATGGTCCAAACTACGTAAGT+AGG - chr6.3:78864183-78864202 MS.gene63435:CDS 40.0%
ATTGAAGCTGAGGGTTTGAT+GGG + chr6.3:78861485-78861504 None:intergenic 40.0%
CAACATTCGAGAGACAATTG+AGG - chr6.3:78862071-78862090 MS.gene63435:intron 40.0%
CAGATCTGTCAAAGATGTCA+AGG - chr6.3:78865220-78865239 MS.gene63435:CDS 40.0%
CAGATGACTCAGATCATTAG+GGG - chr6.3:78862203-78862222 MS.gene63435:intron 40.0%
CAGTCATGCATTAAGGTTAG+TGG - chr6.3:78866212-78866231 MS.gene63435:intron 40.0%
CATGCATTAAGGTTAGTGGA+CGG - chr6.3:78866216-78866235 MS.gene63435:intron 40.0%
CATGCCAAGCAGAATATTGA+AGG - chr6.3:78866975-78866994 MS.gene63435:CDS 40.0%
CATTCGGAGATAGCAAAAGT+TGG + chr6.3:78866549-78866568 None:intergenic 40.0%
CCATGGTAAACAAAGAAAGG+GGG - chr6.3:78862837-78862856 MS.gene63435:CDS 40.0%
CCTCCATGGTAAACAAAGAA+AGG - chr6.3:78862834-78862853 MS.gene63435:CDS 40.0%
CGATTGTTCCAGTCAACATT+CGG + chr6.3:78866565-78866584 None:intergenic 40.0%
CTAATGATCAAGTAACCCTC+CGG + chr6.3:78865317-78865336 None:intergenic 40.0%
CTCCTTACTGCATAATCTCT+GGG + chr6.3:78862161-78862180 None:intergenic 40.0%
GAAACTGGGTTTAAGTGGTT+TGG - chr6.3:78862120-78862139 MS.gene63435:intron 40.0%
GACTTAGACATCCTTTCCTT+CGG + chr6.3:78866644-78866663 None:intergenic 40.0%
GATGGATCCTCCATTATACT+TGG - chr6.3:78865475-78865494 MS.gene63435:intron 40.0%
GCTTAGTGGTCAAAATGTTG+GGG - chr6.3:78866382-78866401 MS.gene63435:intron 40.0%
GGATAAACATTGCCACTGAT+TGG + chr6.3:78861816-78861835 None:intergenic 40.0%
GGCAAAAACAGATGGAATCA+TGG - chr6.3:78864002-78864021 MS.gene63435:intron 40.0%
GGCTTAGTGGTCAAAATGTT+GGG - chr6.3:78866381-78866400 MS.gene63435:intron 40.0%
GGTCATTGCTTAGGAAATGA+TGG - chr6.3:78864093-78864112 MS.gene63435:intron 40.0%
GTAAAATAGACGGTGGAAAC+TGG - chr6.3:78862105-78862124 MS.gene63435:intron 40.0%
GTCAGATGACTCAGATCATT+AGG - chr6.3:78862201-78862220 MS.gene63435:intron 40.0%
GTGAATGCCAACATTCTGTT+TGG - chr6.3:78864532-78864551 MS.gene63435:CDS 40.0%
GTGGCAATGTTTATCCAGAT+GGG - chr6.3:78861820-78861839 MS.gene63435:intron 40.0%
GTTACCTCTGCATATTGAGA+TGG - chr6.3:78863132-78863151 MS.gene63435:intron 40.0%
GTTTGCTTAGCTATCCTTGA+TGG - chr6.3:78865439-78865458 MS.gene63435:intron 40.0%
TACACGATGTGGATGTTGTA+AGG - chr6.3:78863941-78863960 MS.gene63435:intron 40.0%
TCTCCTTACTGCATAATCTC+TGG + chr6.3:78862162-78862181 None:intergenic 40.0%
TGAGCCTTCAATATTCTGCT+TGG + chr6.3:78866982-78867001 None:intergenic 40.0%
TGGAAACAGCAAAGTAGGAA+AGG - chr6.3:78864695-78864714 MS.gene63435:intron 40.0%
TGGCTTAGTGGTCAAAATGT+TGG - chr6.3:78866380-78866399 MS.gene63435:intron 40.0%
TGGTCATAGGAAAACTAGAC+GGG - chr6.3:78862032-78862051 MS.gene63435:intron 40.0%
TTACAGTACATCTAGCTGAG+AGG + chr6.3:78863534-78863553 None:intergenic 40.0%
TTCCAAGCATAGAGAGTCTA+CGG + chr6.3:78863690-78863709 None:intergenic 40.0%
TTCCTCACCTCCAAGTATAA+TGG + chr6.3:78865488-78865507 None:intergenic 40.0%
TTGGGTTCGATTCTCATAAG+AGG - chr6.3:78866419-78866438 MS.gene63435:intron 40.0%
! AAGCTAATCTAGAGTTGAGC+CGG + chr6.3:78866753-78866772 None:intergenic 40.0%
! ATGCATTAAGGTTAGTGGAC+GGG - chr6.3:78866217-78866236 MS.gene63435:intron 40.0%
! ATGTTGACTGGAACAATCGT+TGG - chr6.3:78866566-78866585 MS.gene63435:CDS 40.0%
! CCTTTCTTTGTTTACCATGG+AGG + chr6.3:78862837-78862856 None:intergenic 40.0%
! CTCTTTGCCCTTTTTCTCTA+TGG - chr6.3:78861567-78861586 MS.gene63435:intron 40.0%
! GCTTAAAGAAGTTTCTGGGT+TGG - chr6.3:78864876-78864895 MS.gene63435:intron 40.0%
! TGCTTAGGAAATGATGGAGT+TGG - chr6.3:78864099-78864118 MS.gene63435:intron 40.0%
! TTAGGAAATGATGGAGTTGG+TGG - chr6.3:78864102-78864121 MS.gene63435:intron 40.0%
! TTGATGGGTAGGATTGGATT+GGG + chr6.3:78861470-78861489 None:intergenic 40.0%
! TTTGATGGGTAGGATTGGAT+TGG + chr6.3:78861471-78861490 None:intergenic 40.0%
!! AACTTTGCCAATTTGTTGGC+AGG - chr6.3:78864924-78864943 MS.gene63435:intron 40.0%
!! AAGGGTGTCTTAAAAAAGGG+GGG - chr6.3:78862645-78862664 MS.gene63435:intron 40.0%
!! GAAGGGTGTCTTAAAAAAGG+GGG - chr6.3:78862644-78862663 MS.gene63435:intron 40.0%
!! GGATAGTGTTGGCTTATAGA+TGG + chr6.3:78863654-78863673 None:intergenic 40.0%
!!! CGCTTCGTTTTGGAAACAAA+TGG - chr6.3:78865261-78865280 MS.gene63435:CDS 40.0%
!!! GGACAAGAATTTTTTTCGCG+AGG - chr6.3:78862666-78862685 MS.gene63435:intron 40.0%
!!! TCTGCTGTTTTTCCAATCAG+TGG - chr6.3:78861801-78861820 MS.gene63435:intron 40.0%
AAACTGAGATTGGGTCACTC+GGG - chr6.3:78862403-78862422 MS.gene63435:intron 45.0%
AAATGTTGGGGAGGAGCTAT+TGG - chr6.3:78866394-78866413 MS.gene63435:intron 45.0%
AAGCATAGAGAGTCTACGGA+CGG + chr6.3:78863686-78863705 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr6.3:78862175-78862194 MS.gene63435:intron 45.0%
ACCCAAGTCATACCCCAATA+AGG + chr6.3:78864159-78864178 None:intergenic 45.0%
ACCTTTGCACAACTTCTGCA+CGG + chr6.3:78863098-78863117 None:intergenic 45.0%
ACTCAGATCATTAGGGGTAG+AGG - chr6.3:78862209-78862228 MS.gene63435:intron 45.0%
AGCCCAGAGATTATGCAGTA+AGG - chr6.3:78862156-78862175 MS.gene63435:intron 45.0%
AGTGGAAGCAGAAAGCTACT+TGG + chr6.3:78861660-78861679 None:intergenic 45.0%
ATATATACCCGTGCATCGCA+CGG + chr6.3:78865856-78865875 None:intergenic 45.0%
CAGGTAAAAGAAATCGCTGG+AGG - chr6.3:78864960-78864979 MS.gene63435:intron 45.0%
CATCCTTTCCTTCGGAAAAG+AGG + chr6.3:78866636-78866655 None:intergenic 45.0%
CATTTCACTGCGAGGACATT+TGG - chr6.3:78866900-78866919 MS.gene63435:CDS 45.0%
CCCAAGTCATACCCCAATAA+GGG + chr6.3:78864158-78864177 None:intergenic 45.0%
CCCTTATTGGGGTATGACTT+GGG - chr6.3:78864155-78864174 MS.gene63435:CDS 45.0%
CGTGGTCTCAAGAACAATGA+TGG - chr6.3:78861624-78861643 MS.gene63435:intron 45.0%
CTCACCTCCAAGTATAATGG+AGG + chr6.3:78865485-78865504 None:intergenic 45.0%
CTCCATTATACTTGGAGGTG+AGG - chr6.3:78865483-78865502 MS.gene63435:intron 45.0%
CTGATAAGGTAGGCCAACTT+TGG + chr6.3:78864040-78864059 None:intergenic 45.0%
CTGATCCATTCTACACGATG+TGG - chr6.3:78863930-78863949 MS.gene63435:intron 45.0%
GAACTCCCAAGGAAGAACTA+TGG + chr6.3:78863784-78863803 None:intergenic 45.0%
GATGTGGATGTTGTAAGGTG+TGG - chr6.3:78863946-78863965 MS.gene63435:intron 45.0%
GCAGACCATAGTTCTTCCTT+GGG - chr6.3:78863776-78863795 MS.gene63435:intron 45.0%
GGATCCTCCATTATACTTGG+AGG - chr6.3:78865478-78865497 MS.gene63435:intron 45.0%
GGCACTATGTTGGATAGTGT+TGG + chr6.3:78863665-78863684 None:intergenic 45.0%
GGTTGGGAGAGAACAAAATG+TGG - chr6.3:78866952-78866971 MS.gene63435:CDS 45.0%
GTAAGGGTAAAGTGGAGCTT+TGG - chr6.3:78863394-78863413 MS.gene63435:CDS 45.0%
GTTGAGCCGGAAGATAAGTA+TGG + chr6.3:78866597-78866616 None:intergenic 45.0%
TAGATGCTTAACCAATGCCC+CGG + chr6.3:78863234-78863253 None:intergenic 45.0%
TAGTGGTCAAAATGTTGGGG+AGG - chr6.3:78866385-78866404 MS.gene63435:intron 45.0%
TCCCTTATTGGGGTATGACT+TGG - chr6.3:78864154-78864173 MS.gene63435:CDS 45.0%
TCGGGGCATACACATTATCA+GGG - chr6.3:78862421-78862440 MS.gene63435:intron 45.0%
TGCAGACCATAGTTCTTCCT+TGG - chr6.3:78863775-78863794 MS.gene63435:intron 45.0%
TGCGTGTAATACAACCTGCA+CGG + chr6.3:78862993-78863012 None:intergenic 45.0%
TGCTATCTCCGAATGTTGAC+TGG - chr6.3:78866554-78866573 MS.gene63435:CDS 45.0%
TTTGCAGACATTTCACTGCG+AGG - chr6.3:78866892-78866911 MS.gene63435:CDS 45.0%
! CCCCCTTTCTTTGTTTACCA+TGG + chr6.3:78862840-78862859 None:intergenic 45.0%
! CTGCTAATCTAGAGTTGAGC+CGG + chr6.3:78866610-78866629 None:intergenic 45.0%
! GGGCATGCTTTTGAACACAT+TGG - chr6.3:78863981-78864000 MS.gene63435:intron 45.0%
! TACTTTTGGATTCCTGGCAC+TGG - chr6.3:78863335-78863354 MS.gene63435:intron 45.0%
! TAGGATTGGATTGGGATTGG+TGG + chr6.3:78861462-78861481 None:intergenic 45.0%
! TGCATTAAGGTTAGTGGACG+GGG - chr6.3:78866218-78866237 MS.gene63435:intron 45.0%
!! GGTGGTGGATACATGTTCTT+AGG - chr6.3:78864120-78864139 MS.gene63435:CDS 45.0%
!!! AGATATATATAATTTTAAAA+AGG + chr6.3:78863371-78863390 None:intergenic 5.0%
!!! GATATATATAATTTTAAAAA+GGG + chr6.3:78863370-78863389 None:intergenic 5.0%
!!! TTATTCTTTATTTTTTTTTA+TGG + chr6.3:78866003-78866022 None:intergenic 5.0%
AACTGAGATTGGGTCACTCG+GGG - chr6.3:78862404-78862423 MS.gene63435:intron 50.0%
ACTATAACCCGTGCGATGCA+CGG - chr6.3:78865845-78865864 MS.gene63435:intron 50.0%
AGAATGTTAACCAGTGCCCC+CGG - chr6.3:78863212-78863231 MS.gene63435:intron 50.0%
AGATCCAGGTACGCTTCTCT+CGG + chr6.3:78864756-78864775 None:intergenic 50.0%
AGATGCTTAACCAATGCCCC+GGG + chr6.3:78863233-78863252 None:intergenic 50.0%
AGCAACATGTTCTTCCGTGC+AGG - chr6.3:78862976-78862995 MS.gene63435:CDS 50.0%
AGGCGGGATTAGGGTTAATC+AGG - chr6.3:78866477-78866496 MS.gene63435:CDS 50.0%
ATGATCAAGTAACCCTCCGG+CGG + chr6.3:78865314-78865333 None:intergenic 50.0%
CACATTGTTTCGGATACCGC+CGG - chr6.3:78865295-78865314 MS.gene63435:intron 50.0%
CCTTTCCTTCGGAAAAGAGG+AGG + chr6.3:78866633-78866652 None:intergenic 50.0%
CGGTGGAAACTGGGTTTAAG+TGG - chr6.3:78862115-78862134 MS.gene63435:intron 50.0%
CTCGGGGCATACACATTATC+AGG - chr6.3:78862420-78862439 MS.gene63435:intron 50.0%
GGACTGAACAGAGCCAAAGT+TGG - chr6.3:78864024-78864043 MS.gene63435:intron 50.0%
GGCAGGCTAATTTCCCAATC+AGG - chr6.3:78864941-78864960 MS.gene63435:intron 50.0%
GGCGGGATTAGGGTTAATCA+GGG - chr6.3:78866478-78866497 MS.gene63435:CDS 50.0%
GTCCGTAGACTCTCTATGCT+TGG - chr6.3:78863685-78863704 MS.gene63435:intron 50.0%
TATATACCCGTGCATCGCAC+GGG + chr6.3:78865855-78865874 None:intergenic 50.0%
TCACAGAAGCAACGAGATCC+AGG + chr6.3:78864770-78864789 None:intergenic 50.0%
TCCGTGCAGAAGTTGTGCAA+AGG - chr6.3:78863094-78863113 MS.gene63435:intron 50.0%
! AAGCTGAGGGTTTGATGGGT+AGG + chr6.3:78861481-78861500 None:intergenic 50.0%
! CCTCCTCTTTTCCGAAGGAA+AGG - chr6.3:78866630-78866649 MS.gene63435:CDS 50.0%
! CGGATACAGATGGACTTACG+TGG - chr6.3:78862504-78862523 MS.gene63435:intron 50.0%
! GAGGGTTTGATGGGTAGGAT+TGG + chr6.3:78861476-78861495 None:intergenic 50.0%
! GGGTAGGATTGGATTGGGAT+TGG + chr6.3:78861465-78861484 None:intergenic 50.0%
! GGGTATGACTTGGGTACCTA+TGG - chr6.3:78864164-78864183 MS.gene63435:CDS 50.0%
!! GGAAATGATGGAGTTGGTGG+TGG - chr6.3:78864105-78864124 MS.gene63435:intron 50.0%
!! TTTTCCGAGAGAAGCGTACC+TGG - chr6.3:78864749-78864768 MS.gene63435:intron 50.0%
AATGTTAACCAGTGCCCCCG+GGG - chr6.3:78863214-78863233 MS.gene63435:intron 55.0%
ATGCTTAACCAATGCCCCGG+GGG + chr6.3:78863231-78863250 None:intergenic 55.0%
ATTGTTTCGGATACCGCCGG+AGG - chr6.3:78865298-78865317 MS.gene63435:intron 55.0%
CGGCGGTATCCGAAACAATG+TGG + chr6.3:78865297-78865316 None:intergenic 55.0%
CTATAACCCGTGCGATGCAC+GGG - chr6.3:78865846-78865865 MS.gene63435:intron 55.0%
GAATGTTAACCAGTGCCCCC+GGG - chr6.3:78863213-78863232 MS.gene63435:intron 55.0%
GATGCTTAACCAATGCCCCG+GGG + chr6.3:78863232-78863251 None:intergenic 55.0%
GTCTACGGACGGCACTATGT+TGG + chr6.3:78863675-78863694 None:intergenic 55.0%
TTGTTTCGGATACCGCCGGA+GGG - chr6.3:78865299-78865318 MS.gene63435:intron 55.0%
! AGCAGCCTCCTCTTTTCCGA+AGG - chr6.3:78866625-78866644 MS.gene63435:CDS 55.0%
! GGTTAGTGGACGGGGTTTAG+TGG - chr6.3:78866226-78866245 MS.gene63435:intron 55.0%
! TGGGGAGGAGCTATTGGTCT+TGG - chr6.3:78866400-78866419 MS.gene63435:intron 55.0%
!! GGGGAGGAGCTATTGGTCTT+GGG - chr6.3:78866401-78866420 MS.gene63435:intron 55.0%
!! GGGTCTTGTTAACCAGTGCC+AGG + chr6.3:78863350-78863369 None:intergenic 55.0%
AACCAGTGCCCCCGGGGCAT+TGG - chr6.3:78863220-78863239 MS.gene63435:intron 70.0%
! AACCAATGCCCCGGGGGCAC+TGG + chr6.3:78863225-78863244 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 78861276 78867029 78861276 ID=MS.gene63435
chr6.3 mRNA 78861276 78867029 78861276 ID=MS.gene63435.t1;Parent=MS.gene63435
chr6.3 exon 78866464 78867029 78866464 ID=MS.gene63435.t1.exon1;Parent=MS.gene63435.t1
chr6.3 CDS 78866464 78867029 78866464 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78865190 78865307 78865190 ID=MS.gene63435.t1.exon2;Parent=MS.gene63435.t1
chr6.3 CDS 78865190 78865307 78865190 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78864435 78864664 78864435 ID=MS.gene63435.t1.exon3;Parent=MS.gene63435.t1
chr6.3 CDS 78864435 78864664 78864435 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78864109 78864342 78864109 ID=MS.gene63435.t1.exon4;Parent=MS.gene63435.t1
chr6.3 CDS 78864109 78864342 78864109 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78863520 78863670 78863520 ID=MS.gene63435.t1.exon5;Parent=MS.gene63435.t1
chr6.3 CDS 78863520 78863670 78863520 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78863343 78863428 78863343 ID=MS.gene63435.t1.exon6;Parent=MS.gene63435.t1
chr6.3 CDS 78863343 78863428 78863343 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78862968 78863082 78862968 ID=MS.gene63435.t1.exon7;Parent=MS.gene63435.t1
chr6.3 CDS 78862968 78863082 78862968 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78862806 78862878 78862806 ID=MS.gene63435.t1.exon8;Parent=MS.gene63435.t1
chr6.3 CDS 78862806 78862878 78862806 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
chr6.3 exon 78861276 78861406 78861276 ID=MS.gene63435.t1.exon9;Parent=MS.gene63435.t1
chr6.3 CDS 78861276 78861406 78861276 ID=cds.MS.gene63435.t1;Parent=MS.gene63435.t1
Gene Sequence

>MS.gene63435

ATGGAAGATGATGAATCACCACAACTCAAAAGTGTTGTTATAATTTCTCTTCCACCTTCAAATAACCCTTCTTTAGGTAAAACCATAACTGCTTTTACTTTCTTTAACCCCTTTTCTCAACAACATCTTCATCGACAACATCATCAACAACAACAAGAACATGAACAACCTCAAAACAATGATCCACCAATCCCAATCCAATCCTACCCATCAAACCCTCAGCTTCAATTTTCATTCAGAAGACTCTTTCACATCACCCCAACAAAGCTTTTCACATTCTTTGGCATTTTTCTCTTTGCCCTTTTTCTCTATGGTTCACTATTTTCAACTACAACATTACTTGAACTACGTGGTCTCAAGAACAATGATGGTGATGATGAACCAAGTAGCTTTCTGCTTCCACTTTTTAAGAAATATGGTGTTCTTGGTCAGAGAGATTTGAAGCTTAAATTGGGGAAGATTGTTGATGTTAAAAAAAGAAACTTTATTGCTTCTAGCTCTAAGGTTGTAGCTGTTGACTCTTCATCTGCTGTTTTTCCAATCAGTGGCAATGTTTATCCAGATGGGTATGTTAAAAATCGTTGCTTTTTGCTTATATTTGACTTAATTTGGATCAATGAAAAGTTGAAAGTTTTGAATTTTTTCCCTTTTTTGTTGTTATCGGATCGCGTTGACTAATTGTTGCTGTTGACTAATTGTTGCTTATTCAAGTTTAACTTTCGTAGTATATACTACGAAAGATTAGAAATGGTTTATTGGTCATAGGAAAACTAGACGGGATAAGATTAGAAATGACAACATTCGAGAGACAATTGAGGTAGCACCTATAGTAAAATAGACGGTGGAAACTGGGTTTAAGTGGTTTGGGCATGTAGAGAGAAGCCCAGAGATTATGCAGTAAGGAGAGTAGATCAGATGGAGGATAGTCAGATGACTCAGATCATTAGGGGTAGAGGAAAACCTAGAAAAACTATCAGAGAAACTATTAAGAATGATCTAAATATTATTGAGTTGGATCGAAATATGGTTTATGATAGAACATTGTAGCGGAATTTAATCTATGCAGCCGACCCTATTTAGTGATATAAGGCTTGATTGTTTTTGTTGTTGTTACATTGTCTATAAGAAAACTGAGATTGGGTCACTCGGGGCATACACATTATCAGGGTAAACTAGTTTTACACTGAGTCTAATGGGAATCCAAGATTTTCCAATTATTTTTAAATTACGGATACAGATGGACTTACGTGGCAATATCATGAATTCTCATTGGATGTCGGTGTAAAACTATTTTACATCGGCTATATAGATCTCTATTAAACTCAAAAACTGTACTGTAATTAGGAGTATCAATGCAATTGAATATTTGAAGGGTGTCTTAAAAAAGGGGGGACAAGAATTTTTTTCGCGAGGGTTTTATATTTAAGGACTAGGTGGTACGTAAGTTTTTCTGTAGAGTGACTTTTGTTCTTTTATGCAGCTACCTACACTGTAGTGCATCAGTATCATACAAGTTTTATAACTCTAGGATTGAGGTCATACTCATAGGTTCAAATATCCTCCATGGTAAACAAAGAAAGGGGGCAAGTTTTTGTTTTGAATTGGTCCTAGAACTAAGATACTCCAACTATATGATATAGGAACTACTGATTTGTGCTATTCCAATTTCCTGTATTACATATGCATCATTGTGTTGGCTTAGCAACATGTTCTTCCGTGCAGGTTGTATTACACGCATTTACGTGTCGGAAACCCTCCGAAACGATATTTTGTTGATGTGGATACAGGGAGTGACTTAACTTGGATTCAGTGTGATGCTCCGTGCAGAAGTTGTGCAAAGGTAATATCTGACTACTGTTACCTCTGCATATTGAGATGGATTATATGCCAGAAACCATTAGTCATTATGCTTTCACTACTTGTATTTTTTAAAAGGAGAATGTTAACCAGTGCCCCCGGGGCATTGGTTAAGCATCTAAAAGAGGTAAGTTTTTATTAAAAAATGGTGTAATAATTAGTTAGTCAAAAGTAACCGTTTATATTTCCAACACAATTTTTCTACTTTTGGATTCCTGGCACTGGTTAACAAGACCCTTTTTAAAATTATATATATCTTGTGTAAGGGTAAAGTGGAGCTTTGGCTTAACAGTTTGAGCGTTATCATGTGATTCCGCACATTACTATAGCTTTATAGAATCAGGCTGCACTGCACTTCACACATTATTGTGTAATCATAAACTGAATATTAGAAAATGCCTCTCAGCTAGATGTACTGTAAATATATGCTGACTATGTTTTTTTTTTCCATGTAAGTGAATTTTATGAGATTGAAAAACTATGTTAACTCGAGATATAATTGATATAGGGAGCAAATGCCATCTATAAGCCAACACTATCCAACATAGTGCCGTCCGTAGACTCTCTATGCTTGGAAGTTCAGAAATATGAGAAGAATGGATACGATGAAAACTTCCAACAGTGTGACTATGAAATTCAATATGCAGACCATAGTTCTTCCTTGGGAGTTCTTATTAAGGATGATCTTCATCTTATGACTACTAATGGATCCAAAACCAAGTTAAATTTTGTTTTCGGGTAAGAATCATCATTGTGCTGTCTTTTTTTCTCATAAGGCAATATTTTCTACAAAAGTGCTGATCCATTCTACACGATGTGGATGTTGTAAGGTGTGGATATGATCAAGAGGGCATGCTTTTGAACACATTGGCAAAAACAGATGGAATCATGGGACTGAACAGAGCCAAAGTTGGCCTACCTTATCAGTTAGCAAGTAAAGGGCTTATTAAGAATGTTGTTGGTCATTGCTTAGGAAATGATGGAGTTGGTGGTGGATACATGTTCTTAGGTGATGATTTTGTCCCTTATTGGGGTATGACTTGGGTACCTATGGTCCAAACTACGTAAGTAGGATTTTCTCGACAATGTGCTTCTTTACTCTTCATGAAGTGACTTTGTTTCGTTGTTTGAGAAATCTACAATATAACGGTCTGTTTATTTTCTAAAGTAACTTCTGTTTTTAGGAATTTTCAGAAATATTCAATCTATTTTTAAAATTCATTTTTAGAAACTTCTGTAATTTTTATTATATCAGTGGAAATGAAAACAGGAAACAGATGAAGTAATCGGACCTAAACTCCAATTTGAGAATACCAACATTGATTCTTAAAACTATTGTTGTATATTGTTTGAGAATTTTTGTTTTTAAATGTTTTTCTAAACGTACTGTTAAATTATTGTGAATGCCAACATTCTGTTTGGAGCACTTGTTATTTGTTGTTTCTGAGGTTTCTTCTGATTAATCTATAATTTATATGTGACATATTCTCTGCTCTATACAGAGATTTATACCAAACTGAGATTCTTGGAATAAACTACGGAAATCGTCTTCTCAGTTTTGATGGAAACAGCAAAGTAGGAAAGGTGATTTTTGATAGTGGCAGTTCTTATACGTATTTTCCGAGAGAAGCGTACCTGGATCTCGTTGCTTCTGTGAGTTTTTAAATCTGACAAAAATTATGCAATTGGTTTTAGTCCAAAGTCCAATGTTGAATATGAATTCATTATGAATACAATGATGCAGCTTAAAGAAGTTTCTGGGTTGGGGCTCATTCAAGATGATTCCGACACAACTTTGCCAATTTGTTGGCAGGCTAATTTCCCAATCAGGTAAAAGAAATCGCTGGAGGTGAAATTCAGTATTTGGTTTTTGTAATGCTGGCTGTTTTCAGCTTATATCTATAAATTTTTCTAGGATCGCTTATGAAAACAGCTTATAACTCATGAAAATAGTTCGATGTTATTTTTTGATATAGAAACAGCTTATGCATAAGCAATTATATGATAAGTGCTTACGCTATTAGCGCTTAATTAAGTTGTTTATCAAAACAGAGAAAAACTGGTCTGAGATCCGTGTTATATGCATGCAGATCTGTCAAAGATGTCAAGGATTACTTCAAGACATTAACGCTTCGTTTTGGAAACAAATGGTGGATTTTGTCCACATTGTTTCGGATACCGCCGGAGGGTTACTTGATCATTAGTGTAATCCTCTTTTTCTAATACAACTTTTATTTCCATTTCCAAATGATTTTTGTTCTTGGAAGGCCTTCTAATAAACTTCTATGCTGCAGAACAAAGGCAATGTTTGCTTAGCTATCCTTGATGGTAGCAATGTTAATGATGGATCCTCCATTATACTTGGAGGTGAGGAAAACTTTCTTATGATATTGTGCCTTCTAGTTTTTATCCAAGTTTTTTATGTTGATGAATGGATTATTGAATTTCAAATAAGATAATATGCTTTATAAGATAATATGCTTTATACACTCTTTTTTGGTGTGTTGTTGATAAATAACTCAGCTAGGATTAGGTCATTAAGTGTTATTGAGGTTCTGTCATTTTATTATAGTAAATCAAGTTACTAAGTTACAAGTTATTTTACATTAAGATTTGGAACTTCTATGACTTTGTGATTCATATATATTAGTGTTACTAACTTTTCTATCTATTTTCTCTGAATACACCTAACTCTTGATTCTTTTATACTAGACTATAACCCGTGCGATGCACGGGTATATATTTTTTTGAATGGTATTTTAGAGTTTCATGTATAGTTATCAAATTATTAGAAACATTTAATGGAATACAATAGTGTTTTAAAAAAACTAAAGCGATTCATTAATTGACTGTATGATGTATATACTCCATAAAAAAAAATAAAGAATAAAAATGAAATCAAACATTCCTTAAAAAAAAAATGAAATCAGACATATATATATATATATATATATATATATATATATATATATATATATATTCCCTAATTTGAAATGAGACATATATATTGCTTATAGAAATGTTATAACTGACTATATTAAAATAATGATTAATAACGTAGACAATTTGTCAAAAAGTTCAGTCATGCATTAAGGTTAGTGGACGGGGTTTAGTGGTAAGTTATGATGTTGATAATAATAACCGTGTGGGTAGATATTAATAAGTGGTTAGTCAGTTACGGATAATGTGATAGTGGTATATTGGATATCAATTAATGGAAACAAAATTAAATCAAAAAAATTGTTAGTGGCTTAGTGGTCAAAATGTTGGGGAGGAGCTATTGGTCTTGGGTTCGATTCTCATAAGAGGTTTTTTTCATTAAGATTTTTTAAGCTAATAAAAAAAGGCGGGATTAGGGTTAATCAGGGCTACTTGCAGACTGTTTAACATTTATATATATAAAGATTAGTATACCAACTTTTGCTATCTCCGAATGTTGACTGGAACAATCGTTGGTCAAACCATACTTATCTTCCGGCTCAACTCTAGATTAGCAGCCTCCTCTTTTCCGAAGGAAAGGATGTCTAAGTCAAAAATAAATACACCTATAGAGAGAATACTAAATGAAAATGTGGATGCGATGAACATTTTGAAAACACTTGATGCTTTCTTATATTCCGGCTCAACTCTAGATTAGCTTTTTTTTTTTTATTCTACACCTTAGTTTCTAATTTGCGACATCTTCTCTTTTCTATTCATTTGCTAAGCTTGATGAACATTTTTTTCTGCTTAATTGATTATGAATGAATAAATTTAATCTTTGCAGACATTTCACTGCGAGGACATTTGGTTGTGTATGACAATGTGAACAAGAATATTGGTTGGGAGAGAACAAAATGTGGCATGCCAAGCAGAATATTGAAGGCTCACAATTTCTTAAGTGATAGTATGTTATGA
Protein sequence

>MS.gene63435.t1

MEDDESPQLKSVVIISLPPSNNPSLGKTITAFTFFNPFSQQHLHRQHHQQQQEHEQPQNNDPPIPIQSYPSNPQLQFSFRRLFHITPTKLFTFFGIFLFALFLYGSLFSTTTLLELRGLKNNDGDDEPSSFLLPLFKKYGVLGQRDLKLKLGKIVDVKKRNFIASSSKVVAVDSSSAVFPISGNVYPDGLYYTHLRVGNPPKRYFVDVDTGSDLTWIQCDAPCRSCAKGANAIYKPTLSNIVPSVDSLCLEVQKYEKNGYDENFQQCDYEIQYADHSSSLGVLIKDDLHLMTTNGSKTKLNFVFGCGYDQEGMLLNTLAKTDGIMGLNRAKVGLPYQLASKGLIKNVVGHCLGNDGVGGGYMFLGDDFVPYWGMTWVPMVQTTDLYQTEILGINYGNRLLSFDGNSKVGKVIFDSGSSYTYFPREAYLDLVASLKEVSGLGLIQDDSDTTLPICWQANFPIRSVKDVKDYFKTLTLRFGNKWWILSTLFRIPPEGYLIISNKGNVCLAILDGSNVNDGSSIILGDISLRGHLVVYDNVNKNIGWERTKCGMPSRILKAHNFLSDSML