AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63713

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63713.t1 MTR_2g075770 95.882 340 14 0 1 340 1 340 0.0 681
MS.gene63713.t1 MTR_2g075760 83.578 341 55 1 1 340 1 341 0.0 594
MS.gene63713.t1 MTR_2g075780 81.471 340 63 0 1 340 1 340 0.0 580
MS.gene63713.t1 MTR_2g075780 75.000 340 56 1 1 340 1 311 0.0 523
MS.gene63713.t1 MTR_2g075790 55.937 320 72 6 1 320 1 251 4.95e-114 331
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63713.t1 AT1G78660 69.207 328 90 3 22 339 15 341 3.17e-170 477
MS.gene63713.t1 AT1G78660 69.207 328 90 3 22 339 15 341 3.17e-170 477
MS.gene63713.t1 AT1G78660 66.569 341 111 2 1 339 1 340 1.19e-169 476
MS.gene63713.t1 AT1G78680 67.160 338 103 3 4 339 9 340 9.36e-168 471
MS.gene63713.t1 AT1G78680 66.565 329 102 3 4 330 9 331 8.95e-162 455
MS.gene63713.t1 AT1G78670 60.000 335 119 3 20 339 17 351 2.61e-147 419

Find 87 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGCAACTGGTCTGTTTA+AGG 0.149969 2.1:+23877819 None:intergenic
TGATTGCTCAGGAGCTTTCC+TGG 0.248595 2.1:+23878459 None:intergenic
CCTAAACAGACGCCATATAC+TGG 0.280041 2.1:+23881250 None:intergenic
CAGAAGCTCGAGTTGGTAAA+TGG 0.307766 2.1:-23881642 MS.gene63713:CDS
CTTTACTACCGGCCAGTTAT+CGG 0.347506 2.1:-23882420 MS.gene63713:CDS
GGAGACTATTTCCCAGTATA+TGG 0.370880 2.1:-23881262 MS.gene63713:CDS
CCAGTATATGGCGTCTGTTT+AGG 0.379616 2.1:-23881250 MS.gene63713:CDS
TGACTGACAATTCCGATAAC+TGG 0.382377 2.1:+23882408 None:intergenic
GATTGCTCAGGAGCTTTCCT+GGG 0.382444 2.1:+23878460 None:intergenic
CGACCGGAGGCACCGTCGCC+GGG 0.385176 2.1:+23882384 None:intergenic
TTGTATTATCCACAAATTGA+AGG 0.401418 2.1:+23880549 None:intergenic
CTCAACTTCTTCAACAAGTC+TGG 0.405018 2.1:+23879993 None:intergenic
GGCAAGTAGCCTTCAATTTG+TGG 0.413636 2.1:-23880558 MS.gene63713:CDS
CCCACTTATTGTGGGTATGC+AGG 0.430432 2.1:-23877763 MS.gene63713:CDS
TCTAACACATCTTGAGCAAC+TGG 0.440733 2.1:+23877808 None:intergenic
AGAATTTAGTGCAAGAAGTC+AGG 0.450449 2.1:-23880579 MS.gene63713:CDS
GGTCGACTCAGTAATGCAAC+TGG 0.454600 2.1:-23882366 MS.gene63713:CDS
TATGTTAAATTTGTTGAAGC+TGG 0.455399 2.1:-23882321 MS.gene63713:CDS
GCCGGTGAGTTGTCCGGCAC+CGG 0.461923 2.1:-23882451 MS.gene63713:CDS
AAGGATTCCAGAGTGGGAAT+TGG 0.464664 2.1:+23882503 None:intergenic
GAGTTCTCTTCACTGGCGGA+TGG 0.471010 2.1:-23881620 MS.gene63713:CDS
CACTTATATATAGTGAGCCC+TGG 0.473356 2.1:-23882281 MS.gene63713:CDS
TTGCTCCGATGAAGATGATA+AGG 0.481072 2.1:-23878403 MS.gene63713:intron
ATTTGTGGATAATACAAAGA+TGG 0.484408 2.1:-23880543 MS.gene63713:CDS
GATTACCTTATCATCTTCAT+CGG 0.484522 2.1:+23878398 None:intergenic
CACTCCACCAATTCCCACTC+TGG 0.488416 2.1:-23882510 MS.gene63713:CDS
CACCCCGGCGACGGTGCCTC+CGG 0.490931 2.1:-23882387 MS.gene63713:CDS
CTCCTCGCCGGTGAGTTGTC+CGG 0.491462 2.1:-23882457 MS.gene63713:CDS
GTAAATGGAGTTCTCTTCAC+TGG 0.492648 2.1:-23881627 MS.gene63713:CDS
TCGACCGGAGGCACCGTCGC+CGG 0.497195 2.1:+23882383 None:intergenic
GATTCCAGAGTGGGAATTGG+TGG 0.497890 2.1:+23882506 None:intergenic
AATTACAGACCCACTTATTG+TGG 0.498730 2.1:-23877772 MS.gene63713:CDS
CCCTGCATACCCACAATAAG+TGG 0.499247 2.1:+23877762 None:intergenic
TCACGTAACTATCCCGTGAC+TGG 0.504204 2.1:-23878241 MS.gene63713:CDS
AGCATTGGAAGATTGAGATA+AGG 0.505560 2.1:+23882535 None:intergenic
CAATCACCTCTGGATGCCAT+TGG 0.507455 2.1:+23878215 None:intergenic
AACTCACCGGCGAGGAGTCA+CGG 0.526121 2.1:+23882463 None:intergenic
GAGTCACGGTGGAGTTCAGT+TGG 0.529399 2.1:+23882477 None:intergenic
CAGGGCTCACTATATATAAG+TGG 0.530717 2.1:+23882282 None:intergenic
CCACTTATTGTGGGTATGCA+GGG 0.532703 2.1:-23877762 MS.gene63713:intron
CTAAACAGACGCCATATACT+GGG 0.533399 2.1:+23881251 None:intergenic
GGTGGAGTTCAGTTGGGAGA+AGG 0.540095 2.1:+23882484 None:intergenic
ATTACAGACCCACTTATTGT+GGG 0.542607 2.1:-23877771 MS.gene63713:CDS
CACACACGGAGGATGCCATT+CGG 0.542675 2.1:-23878038 MS.gene63713:CDS
TGCCATTGGAAGCCAGTCAC+GGG 0.546730 2.1:+23878229 None:intergenic
TACCTTGTGAAGTATCTCCC+AGG 0.547140 2.1:+23882263 None:intergenic
ACTGGCGGATGGGCTAAAGA+AGG 0.547743 2.1:-23881609 MS.gene63713:CDS
ATTGTCAGTCACCCCGGCGA+CGG 0.549881 2.1:-23882396 MS.gene63713:CDS
GTTAAATTTGTTGAAGCTGG+TGG 0.562946 2.1:-23882318 MS.gene63713:CDS
AGTTGCATTACTGAGTCGAC+CGG 0.571667 2.1:+23882368 None:intergenic
AGTTCTCTTCACTGGCGGAT+GGG 0.572584 2.1:-23881619 MS.gene63713:CDS
ACTTATATATAGTGAGCCCT+GGG 0.573015 2.1:-23882280 MS.gene63713:CDS
TCCGGTGCCGGACAACTCAC+CGG 0.573878 2.1:+23882450 None:intergenic
TGGAAGGATCTGTATTTCAA+AGG 0.579593 2.1:-23880523 MS.gene63713:intron
TGGGAGAAGGATTCCAGAGT+GGG 0.582118 2.1:+23882497 None:intergenic
ATCCCGTGACTGGCTTCCAA+TGG 0.582751 2.1:-23878231 MS.gene63713:CDS
ACTGGCCGGTAGTAAAGACT+AGG 0.583826 2.1:+23882426 None:intergenic
CGGTAGTAAAGACTAGGGTC+CGG 0.584863 2.1:+23882432 None:intergenic
ATTGCTCAGGAGCTTTCCTG+GGG 0.587553 2.1:+23878461 None:intergenic
GTGGATAATACAAAGATGGA+AGG 0.589906 2.1:-23880539 MS.gene63713:CDS
TAAAGACTAGGGTCCGGTGC+CGG 0.597236 2.1:+23882438 None:intergenic
ACTCCACCGTGACTCCTCGC+CGG 0.597817 2.1:-23882469 MS.gene63713:CDS
AGTCACGGTGGAGTTCAGTT+GGG 0.600225 2.1:+23882478 None:intergenic
ATGCCATTGGAAGCCAGTCA+CGG 0.604371 2.1:+23878228 None:intergenic
TGACAGTATGGCATATCCCC+AGG 0.605342 2.1:-23878477 MS.gene63713:intron
ACCTTGTGAAGTATCTCCCA+GGG 0.608743 2.1:+23882264 None:intergenic
CTGACTGCAGAAGCTCGAGT+TGG 0.609361 2.1:-23881649 MS.gene63713:intron
ATCGGAATTGTCAGTCACCC+CGG 0.610285 2.1:-23882402 MS.gene63713:CDS
AATTGGTGGAGTGAAAGCAT+TGG 0.611649 2.1:+23882520 None:intergenic
ATAGTTACGTGAACGTACTG+TGG 0.611932 2.1:+23878252 None:intergenic
GACCGGAGGCACCGTCGCCG+GGG 0.617514 2.1:+23882385 None:intergenic
CGAATGGCATCCTCCGTGTG+TGG 0.625839 2.1:+23878039 None:intergenic
AACTTCTTCAACAAGTCTGG+AGG 0.629140 2.1:+23879996 None:intergenic
TGACAATTCCGATAACTGGC+CGG 0.629824 2.1:+23882412 None:intergenic
TATATCAATGATCGTAAGCG+AGG 0.639837 2.1:-23881218 MS.gene63713:intron
AATGGAGTTCTCTTCACTGG+CGG 0.647513 2.1:-23881624 MS.gene63713:CDS
AATATACTGAGTTGTCCGAA+TGG 0.653474 2.1:+23878023 None:intergenic
CTGGCCGGTAGTAAAGACTA+GGG 0.659503 2.1:+23882427 None:intergenic
TGCATTACTGAGTCGACCGG+AGG 0.660462 2.1:+23882371 None:intergenic
TGCCGGACAACTCACCGGCG+AGG 0.669275 2.1:+23882455 None:intergenic
CGGACCCTAGTCTTTACTAC+CGG 0.669370 2.1:-23882431 MS.gene63713:CDS
GATCGGACTCCAGTGAAGCG+AGG 0.670256 2.1:-23877846 MS.gene63713:intron
TGGCTTCCAATGGCATCCAG+AGG 0.676815 2.1:-23878221 MS.gene63713:intron
TTGGGAGAAGGATTCCAGAG+TGG 0.678581 2.1:+23882496 None:intergenic
CCTGCATACCCACAATAAGT+GGG 0.678653 2.1:+23877763 None:intergenic
GCCCTGGGAGATACTTCACA+AGG 0.685443 2.1:-23882265 MS.gene63713:intron
TCACCGGCGAGGAGTCACGG+TGG 0.759137 2.1:+23882466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCTTAATTAAATAAGATT+TGG + chr2.1:23882040-23882059 None:intergenic 10.0%
!! ATCTTAATTAAATAAGATTT+GGG + chr2.1:23882039-23882058 None:intergenic 10.0%
!! TAAAAGTAATAATTTGAATT+TGG + chr2.1:23879981-23880000 None:intergenic 10.0%
!!! AAATCTTATTTAATTAAGAT+TGG - chr2.1:23882039-23882058 MS.gene63713:intron 10.0%
!!! AGAAATTAATTTAAAACTAT+AGG - chr2.1:23880433-23880452 MS.gene63713:intron 10.0%
!!! TAAAAAAATATTTAAGGTAT+TGG - chr2.1:23878640-23878659 MS.gene63713:intron 10.0%
!!! TACCTTAAATATTTTTTTAA+CGG + chr2.1:23878639-23878658 None:intergenic 10.0%
!! AAATCATAAAATAGTATTCA+AGG + chr2.1:23879487-23879506 None:intergenic 15.0%
!! AACCGTTAAAAAAATATTTA+AGG - chr2.1:23878634-23878653 MS.gene63713:intron 15.0%
!! TGTAATTGAATTAATGATAT+TGG + chr2.1:23881256-23881275 None:intergenic 15.0%
!!! AAAACATTTAATGAAAGTAT+AGG - chr2.1:23878423-23878442 MS.gene63713:CDS 15.0%
!!! AAAGTTGTAAAGAAAATTTT+AGG + chr2.1:23882476-23882495 None:intergenic 15.0%
!!! AATTAATTTTTTTTCCTCAA+TGG + chr2.1:23881101-23881120 None:intergenic 15.0%
!!! TTAATTTAAAACTATAGGTA+TGG - chr2.1:23880438-23880457 MS.gene63713:intron 15.0%
!! AAATAAAGATGAACTAAAAG+TGG + chr2.1:23882080-23882099 None:intergenic 20.0%
!! ACTAAAAGATATAACAGTTA+AGG + chr2.1:23878500-23878519 None:intergenic 20.0%
!! ATAGAAAAATGTCTTTGAAT+GGG - chr2.1:23882132-23882151 MS.gene63713:intron 20.0%
!! CACATGTAAAACTAAAAAAT+AGG + chr2.1:23882499-23882518 None:intergenic 20.0%
!! GTAAGCATAAATTCAATAAA+TGG + chr2.1:23882259-23882278 None:intergenic 20.0%
!! TATAGAAAAATGTCTTTGAA+TGG - chr2.1:23882131-23882150 MS.gene63713:intron 20.0%
!! TTTATTGAAAATGTCCAAAA+TGG - chr2.1:23880357-23880376 MS.gene63713:intron 20.0%
!!! AAATTTGGTTCTATTTTAAG+TGG - chr2.1:23878143-23878162 MS.gene63713:intron 20.0%
!!! AGACATTCTATTTTTTCTAT+TGG - chr2.1:23879878-23879897 MS.gene63713:intron 20.0%
!!! ATTCAAAGACATTTTTCTAT+AGG + chr2.1:23882132-23882151 None:intergenic 20.0%
!!! GTATTAGATTTTATTCATGA+AGG + chr2.1:23881908-23881927 None:intergenic 20.0%
!!! TCAGTATATTGCAAATTTTT+TGG - chr2.1:23882198-23882217 MS.gene63713:intron 20.0%
!!! TTCAAAAGTCTTTAATTTAG+AGG - chr2.1:23880121-23880140 MS.gene63713:intron 20.0%
!!! TTTTTTAACTTAATGCATGA+AGG - chr2.1:23881529-23881548 MS.gene63713:intron 20.0%
! AAACCTAAAACAAGTATAAC+TGG + chr2.1:23881930-23881949 None:intergenic 25.0%
! AAACGTAGAAGAAAAAAACA+AGG + chr2.1:23879561-23879580 None:intergenic 25.0%
! AAATAGAATGTCTTACACTT+TGG + chr2.1:23879871-23879890 None:intergenic 25.0%
! AAGGTTGAAATCTTTGAATA+AGG - chr2.1:23881214-23881233 MS.gene63713:intron 25.0%
! AATAACATGTTCCCTTTATA+AGG - chr2.1:23881833-23881852 MS.gene63713:intron 25.0%
! ATTGACTATATAGATGATAG+TGG - chr2.1:23881444-23881463 MS.gene63713:intron 25.0%
! ATTGCACAAACCTTATTAAT+AGG - chr2.1:23881320-23881339 MS.gene63713:intron 25.0%
! ATTTGTGGATAATACAAAGA+TGG - chr2.1:23879665-23879684 MS.gene63713:intron 25.0%
! CCCTTGAAAAATTATTAAAC+CGG + chr2.1:23878324-23878343 None:intergenic 25.0%
! CCTTGAAAAATTATTAAACC+GGG + chr2.1:23878323-23878342 None:intergenic 25.0%
! GAATTCAGTATATGAATAGA+AGG - chr2.1:23878770-23878789 MS.gene63713:intron 25.0%
! GATATCTAATTACAAGATCT+GGG - chr2.1:23879189-23879208 MS.gene63713:intron 25.0%
! GATATTGGAAGAATTCAAAT+CGG + chr2.1:23881241-23881260 None:intergenic 25.0%
! TAATCCTATAATGCTATACA+TGG - chr2.1:23880688-23880707 MS.gene63713:intron 25.0%
! TAGAAAAATGTCTTTGAATG+GGG - chr2.1:23882133-23882152 MS.gene63713:intron 25.0%
! TAGTTTCATATCTTCTAAGT+TGG + chr2.1:23880600-23880619 None:intergenic 25.0%
! TATAACAGTTAAGGTTAACA+TGG + chr2.1:23878491-23878510 None:intergenic 25.0%
! TGATATCTAATTACAAGATC+TGG - chr2.1:23879188-23879207 MS.gene63713:intron 25.0%
! TGGATTTCAAATTCTTAACA+CGG - chr2.1:23879402-23879421 MS.gene63713:intron 25.0%
! TGTACTAGTATGAAAATTAC+TGG + chr2.1:23880844-23880863 None:intergenic 25.0%
! TTCTTATCAATGCAGAATAA+GGG + chr2.1:23880821-23880840 None:intergenic 25.0%
! TTGTATTATCCACAAATTGA+AGG + chr2.1:23879662-23879681 None:intergenic 25.0%
! TTTATAAAAAAATTCCCCTG+AGG - chr2.1:23879053-23879072 MS.gene63713:intron 25.0%
! TTTATGAATTTCGTGTTTGT+TGG - chr2.1:23878894-23878913 MS.gene63713:intron 25.0%
!! AAATCAGCATTTGTATTGAT+TGG - chr2.1:23878359-23878378 MS.gene63713:intron 25.0%
!! AAGATTAGTTAGTAAAGTTG+TGG + chr2.1:23879114-23879133 None:intergenic 25.0%
!! AGTAATTTTCATACTAGTAC+AGG - chr2.1:23880843-23880862 MS.gene63713:intron 25.0%
!! CAAAAAGACTCTTTTCATTA+AGG + chr2.1:23878733-23878752 None:intergenic 25.0%
!! TAAATCTGATAATGCCTTAT+AGG + chr2.1:23880033-23880052 None:intergenic 25.0%
!!! AGGTTTTTAGGTAAATGAAA+TGG - chr2.1:23881502-23881521 MS.gene63713:intron 25.0%
!!! ATACCAGTTATACTTGTTTT+AGG - chr2.1:23881924-23881943 MS.gene63713:intron 25.0%
!!! ATATTGCAAATTTTTTGGTC+AGG - chr2.1:23882203-23882222 MS.gene63713:intron 25.0%
!!! ATTTCAATGCAGATTTTGAT+CGG + chr2.1:23879258-23879277 None:intergenic 25.0%
!!! CATTTGTATTGATTGGTTAA+AGG - chr2.1:23878366-23878385 MS.gene63713:intron 25.0%
!!! CCGGTTTAATAATTTTTCAA+GGG - chr2.1:23878321-23878340 MS.gene63713:intron 25.0%
!!! TATGTTAAATTTGTTGAAGC+TGG - chr2.1:23877887-23877906 MS.gene63713:intron 25.0%
AAACCCTATCACCTTATAAA+GGG + chr2.1:23881847-23881866 None:intergenic 30.0%
AAGAAATCCATCAAGTTATG+GGG + chr2.1:23880662-23880681 None:intergenic 30.0%
AAGCTTGAGATTGTGTATAT+AGG - chr2.1:23878286-23878305 MS.gene63713:intron 30.0%
AAGGAATAAGGGAAATTGTA+GGG + chr2.1:23880630-23880649 None:intergenic 30.0%
AATGTACACTGGTGTAAATT+TGG - chr2.1:23878128-23878147 MS.gene63713:intron 30.0%
AATTCTTTATGTCAATTCGC+TGG - chr2.1:23881004-23881023 MS.gene63713:intron 30.0%
AATTTACACCAGTGTACATT+TGG + chr2.1:23878128-23878147 None:intergenic 30.0%
AGTTGGGAATCAAGAAATAA+GGG + chr2.1:23880907-23880926 None:intergenic 30.0%
ATTCTTTATGTCAATTCGCT+GGG - chr2.1:23881005-23881024 MS.gene63713:intron 30.0%
ATTGCTGTCATAGTTTCATT+TGG - chr2.1:23879382-23879401 MS.gene63713:intron 30.0%
ATTTCTACTAATGAACTCAC+AGG - chr2.1:23881039-23881058 MS.gene63713:intron 30.0%
CAAGAAATCCATCAAGTTAT+GGG + chr2.1:23880663-23880682 None:intergenic 30.0%
CATGTCTTTAGATCTAACTT+TGG - chr2.1:23881698-23881717 MS.gene63713:intron 30.0%
GAGATTGTGTATATAGGTAT+AGG - chr2.1:23878292-23878311 MS.gene63713:intron 30.0%
GAGTAGAAAATAGAAACTCA+TGG + chr2.1:23878252-23878271 None:intergenic 30.0%
GATTACCTTATCATCTTCAT+CGG + chr2.1:23881813-23881832 None:intergenic 30.0%
GGAAAAATTGCAAGGAATAA+GGG + chr2.1:23880641-23880660 None:intergenic 30.0%
GTATCCATGTATAGCATTAT+AGG + chr2.1:23880695-23880714 None:intergenic 30.0%
GTTCTTATCAATGCAGAATA+AGG + chr2.1:23880822-23880841 None:intergenic 30.0%
GTTGTCGAATAAAAACCATT+CGG + chr2.1:23880983-23881002 None:intergenic 30.0%
TAAGCTATTTAATGCATGCT+TGG - chr2.1:23877976-23877995 MS.gene63713:intron 30.0%
TAGAAGAAAAAAACAAGGAC+TGG + chr2.1:23879556-23879575 None:intergenic 30.0%
TAGACTGTATGATCTTAGAT+CGG + chr2.1:23879290-23879309 None:intergenic 30.0%
TATACTAATCAACCCATCAA+GGG + chr2.1:23879742-23879761 None:intergenic 30.0%
TCAGATGGGATGAAAAATTT+GGG + chr2.1:23880790-23880809 None:intergenic 30.0%
TCTTATCAATGCAGAATAAG+GGG + chr2.1:23880820-23880839 None:intergenic 30.0%
TGACTCAACAATAATTCGTA+AGG - chr2.1:23881177-23881196 MS.gene63713:intron 30.0%
TGTGAGTTCATTAGTAGAAA+TGG + chr2.1:23881040-23881059 None:intergenic 30.0%
TTACAGCATTATTCTAGACT+AGG - chr2.1:23881271-23881290 MS.gene63713:CDS 30.0%
TTAGAAGATGGATAACTCAT+GGG - chr2.1:23880934-23880953 MS.gene63713:intron 30.0%
TTCAGATGGGATGAAAAATT+TGG + chr2.1:23880791-23880810 None:intergenic 30.0%
TTCAGTATATGAATAGAAGG+TGG - chr2.1:23878773-23878792 MS.gene63713:intron 30.0%
TTCATTGCTTGTAAATGCTA+AGG + chr2.1:23880063-23880082 None:intergenic 30.0%
TTCTTCTACGTTTACAAGTT+TGG - chr2.1:23879568-23879587 MS.gene63713:intron 30.0%
TTGTCGAATAAAAACCATTC+GGG + chr2.1:23880982-23881001 None:intergenic 30.0%
TTGTTGAGTCACAATAAAAC+CGG + chr2.1:23881168-23881187 None:intergenic 30.0%
TTTAGAAGATGGATAACTCA+TGG - chr2.1:23880933-23880952 MS.gene63713:intron 30.0%
! AATTTTTCCCCATAACTTGA+TGG - chr2.1:23880652-23880671 MS.gene63713:intron 30.0%
! AGAAATTCTTTGAAAACGCA+TGG - chr2.1:23880461-23880480 MS.gene63713:intron 30.0%
! AGAGTCGATAATGACAATTT+TGG + chr2.1:23881614-23881633 None:intergenic 30.0%
! CCCGGTTTAATAATTTTTCA+AGG - chr2.1:23878320-23878339 MS.gene63713:intron 30.0%
! TATCTTTTGCAAAATCACAG+TGG - chr2.1:23878070-23878089 MS.gene63713:CDS 30.0%
! TTCACCATATTGTTGTTAGT+AGG + chr2.1:23881349-23881368 None:intergenic 30.0%
! TTGACGTTTTTCTACTTTCA+CGG - chr2.1:23882340-23882359 MS.gene63713:CDS 30.0%
! TTGATTGGTTAAAGGAGAAT+TGG - chr2.1:23878374-23878393 MS.gene63713:intron 30.0%
! TTTTCATTAAGGTTTACCCA+GGG + chr2.1:23878722-23878741 None:intergenic 30.0%
!! AGTTTGTTTTCAAGATGTCA+AGG - chr2.1:23878842-23878861 MS.gene63713:intron 30.0%
!! ATCTTCTAAAGTTGTGAGTT+GGG + chr2.1:23880923-23880942 None:intergenic 30.0%
!! TAGATTTTTATGCTACTTGC+AGG - chr2.1:23882531-23882550 MS.gene63713:CDS 30.0%
!! TCTAAGTTGGTTCAAGAAAA+AGG + chr2.1:23880587-23880606 None:intergenic 30.0%
!!! GCTGTTTTTTTCATGATGAT+AGG - chr2.1:23879590-23879609 MS.gene63713:intron 30.0%
!!! TAATTTTTCAAGGGAGTTGA+AGG - chr2.1:23878330-23878349 MS.gene63713:intron 30.0%
!!! TGGATACATGCAGATTTTTT+AGG - chr2.1:23880708-23880727 MS.gene63713:intron 30.0%
!!! TTTAGTTCTCAGCTGTTTTT+AGG - chr2.1:23881585-23881604 MS.gene63713:CDS 30.0%
!!! TTTGGTTCTATTTTAAGTGG+AGG - chr2.1:23878146-23878165 MS.gene63713:intron 30.0%
AAAAACCTCTCTCAACAGTT+TGG + chr2.1:23881490-23881509 None:intergenic 35.0%
AACAGATGCATGTATGAGTA+TGG + chr2.1:23878695-23878714 None:intergenic 35.0%
AACAGCTGAGAACTAAAGAA+TGG + chr2.1:23881582-23881601 None:intergenic 35.0%
AAGATCATACAGTCTACATG+TGG - chr2.1:23879294-23879313 MS.gene63713:intron 35.0%
AATATACTGAGTTGTCCGAA+TGG + chr2.1:23882188-23882207 None:intergenic 35.0%
AATTACAGACCCACTTATTG+TGG - chr2.1:23882436-23882455 MS.gene63713:CDS 35.0%
ACATGGAAACCAATTGAGAA+GGG + chr2.1:23879830-23879849 None:intergenic 35.0%
ACTTATATATAGTGAGCCCT+GGG - chr2.1:23877928-23877947 MS.gene63713:intron 35.0%
AGAATTTAGTGCAAGAAGTC+AGG - chr2.1:23879629-23879648 MS.gene63713:intron 35.0%
AGCAATGAAACATGAGAAGA+TGG - chr2.1:23880074-23880093 MS.gene63713:intron 35.0%
AGCATTATTCTAGACTAGGT+TGG - chr2.1:23881275-23881294 MS.gene63713:CDS 35.0%
AGTGGAGGTAAAATCATGTT+TGG - chr2.1:23878161-23878180 MS.gene63713:intron 35.0%
AGTTATGGGGAAAAATTGCA+AGG + chr2.1:23880649-23880668 None:intergenic 35.0%
ATAAGGACTGAAACGAACTT+AGG - chr2.1:23879938-23879957 MS.gene63713:intron 35.0%
ATAAGGGGTTATGTTTCAGA+TGG + chr2.1:23880805-23880824 None:intergenic 35.0%
ATATAGGTATAGGTATCACC+CGG - chr2.1:23878302-23878321 MS.gene63713:intron 35.0%
ATATGGTGAAGTCTCAACTT+AGG - chr2.1:23881359-23881378 MS.gene63713:intron 35.0%
ATGCAGAAGCTGTTTAGATA+AGG - chr2.1:23879921-23879940 MS.gene63713:intron 35.0%
ATTACAGACCCACTTATTGT+GGG - chr2.1:23882437-23882456 MS.gene63713:CDS 35.0%
ATTCGGGAACCAATAAAAGT+GGG + chr2.1:23880966-23880985 None:intergenic 35.0%
CAAACCCTATCACCTTATAA+AGG + chr2.1:23881848-23881867 None:intergenic 35.0%
CAAGGAATAAGGGAAATTGT+AGG + chr2.1:23880631-23880650 None:intergenic 35.0%
CAGTTAAGGTTAACATGGAT+TGG + chr2.1:23878486-23878505 None:intergenic 35.0%
CCAAGAAATCCATCAAGTTA+TGG + chr2.1:23880664-23880683 None:intergenic 35.0%
CTATACTAATCAACCCATCA+AGG + chr2.1:23879743-23879762 None:intergenic 35.0%
GAGTTCATTAGTAGAAATGG+TGG + chr2.1:23881037-23881056 None:intergenic 35.0%
GAGTTGGGAATCAAGAAATA+AGG + chr2.1:23880908-23880927 None:intergenic 35.0%
GATTTCAACACGCGATAAAA+AGG + chr2.1:23879794-23879813 None:intergenic 35.0%
GCACAAACCTTATTAATAGG+AGG - chr2.1:23881323-23881342 MS.gene63713:intron 35.0%
GGGAAAAATTGCAAGGAATA+AGG + chr2.1:23880642-23880661 None:intergenic 35.0%
GTGGAGGTAAAATCATGTTT+GGG - chr2.1:23878162-23878181 MS.gene63713:intron 35.0%
GTGGATAATACAAAGATGGA+AGG - chr2.1:23879669-23879688 MS.gene63713:intron 35.0%
GTTCCCTTTATAAGGTGATA+GGG - chr2.1:23881841-23881860 MS.gene63713:intron 35.0%
TAAGGGGTTATGTTTCAGAT+GGG + chr2.1:23880804-23880823 None:intergenic 35.0%
TAGAAGATGGATAACTCATG+GGG - chr2.1:23880935-23880954 MS.gene63713:intron 35.0%
TAGTAGGCCTCCTATTAATA+AGG + chr2.1:23881333-23881352 None:intergenic 35.0%
TATATCAATGATCGTAAGCG+AGG - chr2.1:23878990-23879009 MS.gene63713:intron 35.0%
TATCCACTCAGAAGCAAAAT+GGG + chr2.1:23879159-23879178 None:intergenic 35.0%
TCAAGTAGTTCCTACCTATA+AGG - chr2.1:23880016-23880035 MS.gene63713:intron 35.0%
TCTATAGGCATCATTTCACA+AGG + chr2.1:23882117-23882136 None:intergenic 35.0%
TCTGCATTTGACTGTTCATA+TGG + chr2.1:23879908-23879927 None:intergenic 35.0%
TGGAAGGATCTGTATTTCAA+AGG - chr2.1:23879685-23879704 MS.gene63713:intron 35.0%
TGTTCCCTTTATAAGGTGAT+AGG - chr2.1:23881840-23881859 MS.gene63713:intron 35.0%
TTAGTAAAGTTGTGGACACT+AGG + chr2.1:23879106-23879125 None:intergenic 35.0%
TTGCATAAGCTACAAAGTGT+AGG + chr2.1:23878037-23878056 None:intergenic 35.0%
! AACTGTTGAGAGAGGTTTTT+AGG - chr2.1:23881490-23881509 MS.gene63713:intron 35.0%
! AGCATTGGAAGATTGAGATA+AGG + chr2.1:23877676-23877695 None:intergenic 35.0%
! CAACTCACAACTTTAGAAGA+TGG - chr2.1:23880922-23880941 MS.gene63713:intron 35.0%
! CTTTTCATTAAGGTTTACCC+AGG + chr2.1:23878723-23878742 None:intergenic 35.0%
! GTTTTTCTACTTTCACGGAT+CGG - chr2.1:23882345-23882364 MS.gene63713:CDS 35.0%
! TATCTGCAAACTTTTCCTCA+GGG + chr2.1:23879071-23879090 None:intergenic 35.0%
! TCTGATAATGCCTTATAGGT+AGG + chr2.1:23880029-23880048 None:intergenic 35.0%
! TTATCTGCAAACTTTTCCTC+AGG + chr2.1:23879072-23879091 None:intergenic 35.0%
! TTTGAAAACGCATGGCTTTT+TGG - chr2.1:23880469-23880488 MS.gene63713:intron 35.0%
!! ACCAAAAAGTATTCCACACA+CGG - chr2.1:23882156-23882175 MS.gene63713:intron 35.0%
!! CATCTTCTAAAGTTGTGAGT+TGG + chr2.1:23880924-23880943 None:intergenic 35.0%
!! CCATAACTTGATGGATTTCT+TGG - chr2.1:23880661-23880680 MS.gene63713:intron 35.0%
!! GTTAAATTTGTTGAAGCTGG+TGG - chr2.1:23877890-23877909 MS.gene63713:intron 35.0%
!! TAAGGACTTTGAAGCATTGA+AGG - chr2.1:23881195-23881214 MS.gene63713:intron 35.0%
!! TAGACAACTTTTGATTGCTC+AGG + chr2.1:23881763-23881782 None:intergenic 35.0%
!! TTTTATGCTACTTGCAGGAA+AGG - chr2.1:23882536-23882555 MS.gene63713:CDS 35.0%
!! TTTTCAAAAAGCATGTGCAC+TGG + chr2.1:23880385-23880404 None:intergenic 35.0%
!!! TTTTTTCCTCAATGGTTCGA+GGG + chr2.1:23881093-23881112 None:intergenic 35.0%
!!! TTTTTTTCCTCAATGGTTCG+AGG + chr2.1:23881094-23881113 None:intergenic 35.0%
AAATTTGGGCCAGAACTTGA+TGG + chr2.1:23880776-23880795 None:intergenic 40.0%
AACAATACTGCAATCACCTC+TGG + chr2.1:23882006-23882025 None:intergenic 40.0%
AACTTCTTCAACAAGTCTGG+AGG + chr2.1:23880215-23880234 None:intergenic 40.0%
AAGTCTCAACTTAGGTGGTT+TGG - chr2.1:23881367-23881386 MS.gene63713:intron 40.0%
AATCTGCAGGAAAAGAGAAG+TGG + chr2.1:23880191-23880210 None:intergenic 40.0%
AATTTGGGCCAGAACTTGAT+GGG + chr2.1:23880775-23880794 None:intergenic 40.0%
AGAGTTTGATGTGGTACACA+TGG + chr2.1:23879847-23879866 None:intergenic 40.0%
AGTCTCAACTTAGGTGGTTT+GGG - chr2.1:23881368-23881387 MS.gene63713:intron 40.0%
ATAGTTACGTGAACGTACTG+TGG + chr2.1:23881959-23881978 None:intergenic 40.0%
ATATGCCAAACTGTTGAGAG+AGG - chr2.1:23881482-23881501 MS.gene63713:intron 40.0%
ATCCACTCAGAAGCAAAATG+GGG + chr2.1:23879158-23879177 None:intergenic 40.0%
CACATGGAAACCAATTGAGA+AGG + chr2.1:23879831-23879850 None:intergenic 40.0%
CACTTATATATAGTGAGCCC+TGG - chr2.1:23877927-23877946 MS.gene63713:intron 40.0%
CAGGGCTCACTATATATAAG+TGG + chr2.1:23877929-23877948 None:intergenic 40.0%
CATTCGGGAACCAATAAAAG+TGG + chr2.1:23880967-23880986 None:intergenic 40.0%
CTAAACAGACGCCATATACT+GGG + chr2.1:23878960-23878979 None:intergenic 40.0%
CTCAACTTCTTCAACAAGTC+TGG + chr2.1:23880218-23880237 None:intergenic 40.0%
CTGTGATACCAAATGTACAC+TGG - chr2.1:23878117-23878136 MS.gene63713:intron 40.0%
GAGGCCTACTAACAACAATA+TGG - chr2.1:23881342-23881361 MS.gene63713:intron 40.0%
GAGGTAAAATCATGTTTGGG+AGG - chr2.1:23878165-23878184 MS.gene63713:intron 40.0%
GGAGACTATTTCCCAGTATA+TGG - chr2.1:23878946-23878965 MS.gene63713:intron 40.0%
GGTTCAAGAAAAAGGAATCC+AGG + chr2.1:23880579-23880598 None:intergenic 40.0%
GTAAATGGAGTTCTCTTCAC+TGG - chr2.1:23878581-23878600 MS.gene63713:intron 40.0%
GTATCCACTCAGAAGCAAAA+TGG + chr2.1:23879160-23879179 None:intergenic 40.0%
TACACAGTAGAGTTGTGTGA+TGG + chr2.1:23880539-23880558 None:intergenic 40.0%
TCACACAACTCTACTGTGTA+AGG - chr2.1:23880539-23880558 MS.gene63713:CDS 40.0%
TCAGTGAGAAGTAGTTCGAT+TGG + chr2.1:23880871-23880890 None:intergenic 40.0%
TCTAACACATCTTGAGCAAC+TGG + chr2.1:23882403-23882422 None:intergenic 40.0%
TCTCTCAACAGTTTGGCATA+TGG + chr2.1:23881483-23881502 None:intergenic 40.0%
TGACTGACAATTCCGATAAC+TGG + chr2.1:23877803-23877822 None:intergenic 40.0%
TGTTGCATTCCCTTCTCAAT+TGG - chr2.1:23879818-23879837 MS.gene63713:intron 40.0%
TTGCACTTTGATCCCTTGAT+GGG - chr2.1:23879727-23879746 MS.gene63713:intron 40.0%
TTGCTCCGATGAAGATGATA+AGG - chr2.1:23881805-23881824 MS.gene63713:intron 40.0%
! AATTGGTGGAGTGAAAGCAT+TGG + chr2.1:23877691-23877710 None:intergenic 40.0%
! AGAGTCTTTTTGCTTCTCTG+AGG - chr2.1:23878741-23878760 MS.gene63713:intron 40.0%
! ATCTGCAAACTTTTCCTCAG+GGG + chr2.1:23879070-23879089 None:intergenic 40.0%
! CACTTTGGAAGAGTTTGATG+TGG + chr2.1:23879856-23879875 None:intergenic 40.0%
! CGAACTACTTCTCACTGATT+TGG - chr2.1:23880873-23880892 MS.gene63713:intron 40.0%
! GAAGATGGTGACGAAAGAAA+TGG - chr2.1:23880089-23880108 MS.gene63713:intron 40.0%
! GATAAGCACGAGAGCATAAA+AGG + chr2.1:23882310-23882329 None:intergenic 40.0%
! GTTTGGCATATGGTTTTCCT+TGG + chr2.1:23881473-23881492 None:intergenic 40.0%
! TCCGTGTGTGGAATACTTTT+TGG + chr2.1:23882160-23882179 None:intergenic 40.0%
! TTATTCTAGACTAGGTTGGC+CGG - chr2.1:23881279-23881298 MS.gene63713:CDS 40.0%
! TTGAGCAACTGGTCTGTTTA+AGG + chr2.1:23882392-23882411 None:intergenic 40.0%
!! AAAAAGTATTCCACACACGG+AGG - chr2.1:23882159-23882178 MS.gene63713:intron 40.0%
!! AAGGTTTTATCGCTAGTCCA+TGG - chr2.1:23881548-23881567 MS.gene63713:intron 40.0%
!! ATAGATGATAGTGGAGACCA+AGG - chr2.1:23881453-23881472 MS.gene63713:intron 40.0%
!! CAATGCAGATTTTGATCGGA+CGG + chr2.1:23879254-23879273 None:intergenic 40.0%
!! GCTTTAGAGAAAAATGACGC+TGG - chr2.1:23878925-23878944 MS.gene63713:intron 40.0%
!!! CACTTTTATTGGTTCCCGAA+TGG - chr2.1:23880965-23880984 MS.gene63713:intron 40.0%
!!! GCAAATTTTTTGGTCAGGTC+AGG - chr2.1:23882208-23882227 MS.gene63713:intron 40.0%
AAAGAATGGAAGACGTGCCA+TGG + chr2.1:23881568-23881587 None:intergenic 45.0%
AAGGATTCCAGAGTGGGAAT+TGG + chr2.1:23877708-23877727 None:intergenic 45.0%
AATGGAGTTCTCTTCACTGG+CGG - chr2.1:23878584-23878603 MS.gene63713:intron 45.0%
ACAAATCCCTCGAACCATTG+AGG - chr2.1:23881084-23881103 MS.gene63713:intron 45.0%
ACAGCAATGTTCACAGCACA+AGG + chr2.1:23879370-23879389 None:intergenic 45.0%
ACATGCATCTGTTAGAACCC+TGG - chr2.1:23878702-23878721 MS.gene63713:intron 45.0%
AGAGGAATACCATGCACAGA+GGG + chr2.1:23881139-23881158 None:intergenic 45.0%
AGGTTTGTGCAATGTGCAGA+TGG + chr2.1:23881313-23881332 None:intergenic 45.0%
AGTTGCATTACTGAGTCGAC+CGG + chr2.1:23877843-23877862 None:intergenic 45.0%
ATGGTATTCCTCTACTGAGC+CGG - chr2.1:23881146-23881165 MS.gene63713:intron 45.0%
ATGGTTCGAGGGATTTGTGA+AGG + chr2.1:23881082-23881101 None:intergenic 45.0%
CACAACTCTACTGTGTAAGG+AGG - chr2.1:23880542-23880561 MS.gene63713:CDS 45.0%
CACGCGATAAAAAGGAGAGA+TGG + chr2.1:23879786-23879805 None:intergenic 45.0%
CATGCATCTGTTAGAACCCT+GGG - chr2.1:23878703-23878722 MS.gene63713:intron 45.0%
CCACTTATTGTGGGTATGCA+GGG - chr2.1:23882446-23882465 MS.gene63713:CDS 45.0%
CCAGTATATGGCGTCTGTTT+AGG - chr2.1:23878958-23878977 MS.gene63713:intron 45.0%
CCTAAACAGACGCCATATAC+TGG + chr2.1:23878961-23878980 None:intergenic 45.0%
CCTGCATACCCACAATAAGT+GGG + chr2.1:23882448-23882467 None:intergenic 45.0%
CTTTACTACCGGCCAGTTAT+CGG - chr2.1:23877788-23877807 MS.gene63713:CDS 45.0%
GGCAAGTAGCCTTCAATTTG+TGG - chr2.1:23879650-23879669 MS.gene63713:intron 45.0%
GGTCATGACTCATGACAGTA+TGG - chr2.1:23881719-23881738 MS.gene63713:intron 45.0%
GTTGCACTTTGATCCCTTGA+TGG - chr2.1:23879726-23879745 MS.gene63713:intron 45.0%
TAAGGATTTCCTCGCTTCAC+TGG + chr2.1:23882374-23882393 None:intergenic 45.0%
TACAAAGTGTAGGCTGAACG+TGG + chr2.1:23878027-23878046 None:intergenic 45.0%
TAGAGGAATACCATGCACAG+AGG + chr2.1:23881140-23881159 None:intergenic 45.0%
TCCACTCAGAAGCAAAATGG+GGG + chr2.1:23879157-23879176 None:intergenic 45.0%
TGACAATTCCGATAACTGGC+CGG + chr2.1:23877799-23877818 None:intergenic 45.0%
TGGTGAAGTCTCAACTTAGG+TGG - chr2.1:23881362-23881381 MS.gene63713:intron 45.0%
TGTGGACACTAGGCATGTAT+CGG + chr2.1:23879096-23879115 None:intergenic 45.0%
! ACCTTGTGAAGTATCTCCCA+GGG + chr2.1:23877947-23877966 None:intergenic 45.0%
! CAATAAAACCGGCTCAGTAG+AGG + chr2.1:23881157-23881176 None:intergenic 45.0%
! TACCTTGTGAAGTATCTCCC+AGG + chr2.1:23877948-23877967 None:intergenic 45.0%
!! CAGAAGCTCGAGTTGGTAAA+TGG - chr2.1:23878566-23878585 MS.gene63713:intron 45.0%
!! GGGGACATTCCCACTTTTAT+TGG - chr2.1:23880954-23880973 MS.gene63713:intron 45.0%
ACAAGGACTGAACACAGCAG+AGG + chr2.1:23880747-23880766 None:intergenic 50.0%
ACTGGCCGGTAGTAAAGACT+AGG + chr2.1:23877785-23877804 None:intergenic 50.0%
ACTTTCATCCCCTCTGTGCA+TGG - chr2.1:23881127-23881146 MS.gene63713:intron 50.0%
AGTCACGGTGGAGTTCAGTT+GGG + chr2.1:23877733-23877752 None:intergenic 50.0%
ATCGGAATTGTCAGTCACCC+CGG - chr2.1:23877806-23877825 MS.gene63713:CDS 50.0%
ATGCCATTGGAAGCCAGTCA+CGG + chr2.1:23881983-23882002 None:intergenic 50.0%
ATTGCTCAGGAGCTTTCCTG+GGG + chr2.1:23881750-23881769 None:intergenic 50.0%
CAAGTCTGGAGGAAATCTGC+AGG + chr2.1:23880204-23880223 None:intergenic 50.0%
CAATCACCTCTGGATGCCAT+TGG + chr2.1:23881996-23882015 None:intergenic 50.0%
CCACTCAGAAGCAAAATGGG+GGG + chr2.1:23879156-23879175 None:intergenic 50.0%
CCCACTTATTGTGGGTATGC+AGG - chr2.1:23882445-23882464 MS.gene63713:CDS 50.0%
CCCTGCATACCCACAATAAG+TGG + chr2.1:23882449-23882468 None:intergenic 50.0%
CGGTAGTAAAGACTAGGGTC+CGG + chr2.1:23877779-23877798 None:intergenic 50.0%
CTGGCCGGTAGTAAAGACTA+GGG + chr2.1:23877784-23877803 None:intergenic 50.0%
GAACACAGCAGAGGATGTAG+AGG + chr2.1:23880738-23880757 None:intergenic 50.0%
GAGGAATACCATGCACAGAG+GGG + chr2.1:23881138-23881157 None:intergenic 50.0%
GATTCCAGAGTGGGAATTGG+TGG + chr2.1:23877705-23877724 None:intergenic 50.0%
GATTGCTCAGGAGCTTTCCT+GGG + chr2.1:23881751-23881770 None:intergenic 50.0%
GCAATGTGCAGATGGCCAAT+GGG + chr2.1:23881305-23881324 None:intergenic 50.0%
GCGCTAGTAAGGACTAAGGA+GGG - chr2.1:23881419-23881438 MS.gene63713:intron 50.0%
GCTGTGTTCAGTCCTTGTTC+CGG - chr2.1:23880749-23880768 MS.gene63713:intron 50.0%
TCACGTAACTATCCCGTGAC+TGG - chr2.1:23881967-23881986 MS.gene63713:intron 50.0%
TGACAGTATGGCATATCCCC+AGG - chr2.1:23881731-23881750 MS.gene63713:intron 50.0%
TGATTGCTCAGGAGCTTTCC+TGG + chr2.1:23881752-23881771 None:intergenic 50.0%
TGCAATGTGCAGATGGCCAA+TGG + chr2.1:23881306-23881325 None:intergenic 50.0%
TGGGAGAAGGATTCCAGAGT+GGG + chr2.1:23877714-23877733 None:intergenic 50.0%
TTGGGAGAAGGATTCCAGAG+TGG + chr2.1:23877715-23877734 None:intergenic 50.0%
! AGTTCTCTTCACTGGCGGAT+GGG - chr2.1:23878589-23878608 MS.gene63713:intron 50.0%
! CGGACCCTAGTCTTTACTAC+CGG - chr2.1:23877777-23877796 MS.gene63713:CDS 50.0%
! GGTCGACTCAGTAATGCAAC+TGG - chr2.1:23877842-23877861 MS.gene63713:intron 50.0%
!! AGAGGCGCTAGTAAGGACTA+AGG - chr2.1:23881415-23881434 MS.gene63713:intron 50.0%
!! CATGTGCACTGGCACCATTT+TGG + chr2.1:23880374-23880393 None:intergenic 50.0%
!! GAGTCTTAGAGGCGCTAGTA+AGG - chr2.1:23881408-23881427 MS.gene63713:intron 50.0%
ACTCCGCAGTCAACCACATC+TGG - chr2.1:23879227-23879246 MS.gene63713:intron 55.0%
CACACACGGAGGATGCCATT+CGG - chr2.1:23882170-23882189 MS.gene63713:intron 55.0%
CACTCCACCAATTCCCACTC+TGG - chr2.1:23877698-23877717 MS.gene63713:intron 55.0%
CTGACTGCAGAAGCTCGAGT+TGG - chr2.1:23878559-23878578 MS.gene63713:intron 55.0%
GAGTCACGGTGGAGTTCAGT+TGG + chr2.1:23877734-23877753 None:intergenic 55.0%
GAGTTCTCTTCACTGGCGGA+TGG - chr2.1:23878588-23878607 MS.gene63713:intron 55.0%
GCCCTGGGAGATACTTCACA+AGG - chr2.1:23877943-23877962 MS.gene63713:intron 55.0%
GGAGAGATGGCTCACATCAG+CGG + chr2.1:23879773-23879792 None:intergenic 55.0%
GGCGCTAGTAAGGACTAAGG+AGG - chr2.1:23881418-23881437 MS.gene63713:intron 55.0%
GGTCCAGATGTGGTTGACTG+CGG + chr2.1:23879233-23879252 None:intergenic 55.0%
GGTGGAGTTCAGTTGGGAGA+AGG + chr2.1:23877727-23877746 None:intergenic 55.0%
TAAAGACTAGGGTCCGGTGC+CGG + chr2.1:23877773-23877792 None:intergenic 55.0%
TGAGGGAGGAGGAGTCTTAG+AGG - chr2.1:23881397-23881416 MS.gene63713:intron 55.0%
TGCATTACTGAGTCGACCGG+AGG + chr2.1:23877840-23877859 None:intergenic 55.0%
TGCCATTGGAAGCCAGTCAC+GGG + chr2.1:23881982-23882001 None:intergenic 55.0%
TGGCTTCCAATGGCATCCAG+AGG - chr2.1:23881987-23882006 MS.gene63713:intron 55.0%
TGTTCCGGCCCATCAAGTTC+TGG - chr2.1:23880764-23880783 MS.gene63713:intron 55.0%
TTGATCGGACGGTCCAGATG+TGG + chr2.1:23879243-23879262 None:intergenic 55.0%
! CCCCCCATTTTGCTTCTGAG+TGG - chr2.1:23879153-23879172 MS.gene63713:intron 55.0%
! GAACTTGATGGGCCGGAACA+AGG + chr2.1:23880764-23880783 None:intergenic 55.0%
!! AAGGAGGCATTGCAGTCACC+TGG - chr2.1:23880558-23880577 MS.gene63713:CDS 55.0%
!! ACTGGCGGATGGGCTAAAGA+AGG - chr2.1:23878599-23878618 MS.gene63713:intron 55.0%
!! ATCCCGTGACTGGCTTCCAA+TGG - chr2.1:23881977-23881996 MS.gene63713:intron 55.0%
AACTCACCGGCGAGGAGTCA+CGG + chr2.1:23877748-23877767 None:intergenic 60.0%
ATTGTCAGTCACCCCGGCGA+CGG - chr2.1:23877812-23877831 MS.gene63713:CDS 60.0%
CGAATGGCATCCTCCGTGTG+TGG + chr2.1:23882172-23882191 None:intergenic 60.0%
GATCGGACTCCAGTGAAGCG+AGG - chr2.1:23882362-23882381 MS.gene63713:CDS 60.0%
TGTGCAGATGGCCAATGGGC+CGG + chr2.1:23881301-23881320 None:intergenic 60.0%
! AGGTGGTTTGGGCATGCGTG+AGG - chr2.1:23881379-23881398 MS.gene63713:intron 60.0%
! GGTGGTTTGGGCATGCGTGA+GGG - chr2.1:23881380-23881399 MS.gene63713:intron 60.0%
! TGGGCCAGAACTTGATGGGC+CGG + chr2.1:23880771-23880790 None:intergenic 60.0%
ACTCCACCGTGACTCCTCGC+CGG - chr2.1:23877739-23877758 MS.gene63713:intron 65.0%
CTCCTCGCCGGTGAGTTGTC+CGG - chr2.1:23877751-23877770 MS.gene63713:intron 65.0%
GGTTTGGGCATGCGTGAGGG+AGG - chr2.1:23881383-23881402 MS.gene63713:intron 65.0%
TTGGGCATGCGTGAGGGAGG+AGG - chr2.1:23881386-23881405 MS.gene63713:intron 65.0%
! GACTAGGTTGGCCGGCCCAT+TGG - chr2.1:23881287-23881306 MS.gene63713:CDS 65.0%
! TCCGGTGCCGGACAACTCAC+CGG + chr2.1:23877761-23877780 None:intergenic 65.0%
GCCGGTGAGTTGTCCGGCAC+CGG - chr2.1:23877757-23877776 MS.gene63713:intron 70.0%
TCACCGGCGAGGAGTCACGG+TGG + chr2.1:23877745-23877764 None:intergenic 70.0%
TGCCGGACAACTCACCGGCG+AGG + chr2.1:23877756-23877775 None:intergenic 70.0%
!! TCGACCGGAGGCACCGTCGC+CGG + chr2.1:23877828-23877847 None:intergenic 75.0%
! CACCCCGGCGACGGTGCCTC+CGG - chr2.1:23877821-23877840 MS.gene63713:CDS 80.0%
!!! CGACCGGAGGCACCGTCGCC+GGG + chr2.1:23877827-23877846 None:intergenic 80.0%
!!! GACCGGAGGCACCGTCGCCG+GGG + chr2.1:23877826-23877845 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 23877644 23882586 23877644 ID=MS.gene63713
chr2.1 mRNA 23877644 23882586 23877644 ID=MS.gene63713.t1;Parent=MS.gene63713
chr2.1 exon 23882266 23882586 23882266 ID=MS.gene63713.t1.exon1;Parent=MS.gene63713.t1
chr2.1 CDS 23882266 23882586 23882266 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23881575 23881661 23881575 ID=MS.gene63713.t1.exon2;Parent=MS.gene63713.t1
chr2.1 CDS 23881575 23881661 23881575 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23881219 23881308 23881219 ID=MS.gene63713.t1.exon3;Parent=MS.gene63713.t1
chr2.1 CDS 23881219 23881308 23881219 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23880524 23880618 23880524 ID=MS.gene63713.t1.exon4;Parent=MS.gene63713.t1
chr2.1 CDS 23880524 23880618 23880524 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23879962 23880022 23879962 ID=MS.gene63713.t1.exon5;Parent=MS.gene63713.t1
chr2.1 CDS 23879962 23880022 23879962 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23878404 23878493 23878404 ID=MS.gene63713.t1.exon6;Parent=MS.gene63713.t1
chr2.1 CDS 23878404 23878493 23878404 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23878222 23878284 23878222 ID=MS.gene63713.t1.exon7;Parent=MS.gene63713.t1
chr2.1 CDS 23878222 23878284 23878222 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23878006 23878094 23878006 ID=MS.gene63713.t1.exon8;Parent=MS.gene63713.t1
chr2.1 CDS 23878006 23878094 23878006 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23877763 23877855 23877763 ID=MS.gene63713.t1.exon9;Parent=MS.gene63713.t1
chr2.1 CDS 23877763 23877855 23877763 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
chr2.1 exon 23877644 23877677 23877644 ID=MS.gene63713.t1.exon10;Parent=MS.gene63713.t1
chr2.1 CDS 23877644 23877677 23877644 ID=cds.MS.gene63713.t1;Parent=MS.gene63713.t1
Gene Sequence

>MS.gene63713

ATGTCAAACGTAGTTGTTCTGTTTCTCTTCCTTATCTCAATCTTCCAATGCTTTCACTCCACCAATTCCCACTCTGGAATCCTTCTCCCAACTGAACTCCACCGTGACTCCTCGCCGGTGAGTTGTCCGGCACCGGACCCTAGTCTTTACTACCGGCCAGTTATCGGAATTGTCAGTCACCCCGGCGACGGTGCCTCCGGTCGACTCAGTAATGCAACTGGAGCTAATTATATTGCTGCTTCTTATGTTAAATTTGTTGAAGCTGGTGGTGCTAGAGTTGTTCCACTTATATATAGTGAGCCCTGGGAGATACTTCACAAGGTATCAATCAATAAGCTATTTAATGCATGCTTGGTATCACATTAGATTTGTCATAATCACCACGTTCAGCCTACACTTTGTAGCTTATGCAAAAGCAACATTTTGTATCTTTTGCAAAATCACAGTGGTTTACTTTGATTTTCGCAAGTCTACTGTGATACCAAATGTACACTGGTGTAAATTTGGTTCTATTTTAAGTGGAGGTAAAATCATGTTTGGGAGGTTATTGTCTAGAATTGATTCTAATACTTTTCTACTATGATTTTCTGTTATCTTTCAGTTAGCCATGAGTTTCTATTTTCTACTCTTTTGCTTCAAGTCAAGCTTGAGATTGTGTATATAGGTATAGGTATCACCCGGTTTAATAATTTTTCAAGGGAGTTGAAGGAAAAAAAAATCAGCATTTGTATTGATTGGTTAAAGGAGAATTGGATTCTTATCATGAAAATGAATATAGAAAAACATTTAATGAAAGTATAGGATTTCAAAAAACAAAGAAAAAAAATCTTTTTTATACTCCAATCCATGTTAACCTTAACTGTTATATCTTTTAGTTCTTGAAATGTTTGTAACGATATTGATTACATTTTTTCACTGACTGCAGAAGCTCGAGTTGGTAAATGGAGTTCTCTTCACTGGCGGATGGGCTAAAGAAGGTTTATATTTTGAAACCGTTAAAAAAATATTTAAGGTATTGGTTTATTATTATCATTTTATTCTAATACTTCCATACTCATACATGCATCTGTTAGAACCCTGGGTAAACCTTAATGAAAAGAGTCTTTTTGCTTCTCTGAGGCTTCTAGAATTCAGTATATGAATAGAAGGTGGAAAAGTTGTTATTGTTGACTTGTATTACTTGTAGTTTTGTGAGATGAGTTTGTTTTCAAGATGTCAAGGAATGTTTTGTTGATGAATTGATTTATGCATTTATGAATTTCGTGTTTGTTGGTGCAGATAGCTTTAGAGAAAAATGACGCTGGAGACTATTTCCCAGTATATGGCGTCTGTTTAGGCTTCGAACTTATATCAATGATCGTAAGCGAGGTGAGTTAGCTTTCTTATAGATTTTATCATGTCTGACTTTCTTTATAAAAAAATTCCCCTGAGGAAAAGTTTGCAGATAAGCCGATACATGCCTAGTGTCCACAACTTTACTAACTAATCTTGTGTATAAGAAGTGTTTTACCCCCCATTTTGCTTCTGAGTGGATACAGTTTATATGATATCTAATTACAAGATCTGGGTTGTGTGCACTCACAACTCCGCAGTCAACCACATCTGGACCGTCCGATCAAAATCTGCATTGAAATCTAGACTGTCCGATCTAAGATCATACAGTCTACATGTGGCTTACTGCATGCAGTCACACTGCATACGATCAAAATCGCTTATTATGTTTCCTTGTGCTGTGAACATTGCTGTCATAGTTTCATTTGGATTTCAAATTCTTAACACGGAGAAAGTAGAAAGATTAGCTATTAAGTTGACTTGATATATTTTATGCATATATTGAACACCTTGAATACTATTTTATGATTTGAAATGTTGCAAAAAGTTGAAGACTTCTGACAAGTTAACGCACATTCCAGTCCTTGTTTTTTTCTTCTACGTTTACAAGTTTGGCTGTTTTTTTCATGATGATAGGACAATGATATTCTTGAAGAATTTAGTGCAAGAAGTCAGGCAAGTAGCCTTCAATTTGTGGATAATACAAAGATGGAAGGATCTGTATTTCAAAGGTAATTGTATTTTTCTGAAGTTGCACTTTGATCCCTTGATGGGTTGATTAGTATAGCTTGCTACCGCTGATGTGAGCCATCTCTCCTTTTTATCGCGTGTTGAAATCTACTTGTTGCATTCCCTTCTCAATTGGTTTCCATGTGTACCACATCAAACTCTTCCAAAGTGTAAGACATTCTATTTTTTCTATTGGATATCCATATGAACAGTCAAATGCAGAAGCTGTTTAGATAAGGACTGAAACGAACTTAGGAAGTGTGTTTTTGTTGTCCAAATTCAAATTATTACTTTTAGCATAAGTGAAAAGCTCAAGTAGTTCCTACCTATAAGGCATTATCAGATTTATCAGATTCCTTAGCATTTACAAGCAATGAAACATGAGAAGATGGTGACGAAAGAAATGGTTTCAATCATTCAAAAGTCTTTAATTTAGAGGTTCTTTTAACATTTTGTAACTGAGTATAGTATGCAAGTTATTAACCACTTCTCTTTTCCTGCAGATTTCCTCCAGACTTGTTGAAGAAGTTGAGTACAGATTGTCTTGTCATGCAAAATCATCGTGTGAGTACATATATAGACATATTCAGTTAGTTGTGTCTAGCAAAATCTTAGTTTACAGATTGTCTTGTCTAGCAAAATCTGCATTGTATTTATTGAAAATGTCCAAAATGGTGCCAGTGCACATGCTTTTTGAAAATGATAGTCTTAGTTGCAGTGTTAAAAGAAGAAATTAATTTAAAACTATAGGTATGGAGAAATTCTTTGAAAACGCATGGCTTTTTGGAAATGATACTTAGTTTATAAACTCATTCACATCTGATTTTTCTTCCATCACACAACTCTACTGTGTAAGGAGGCATTGCAGTCACCTGGATTCCTTTTTCTTGAACCAACTTAGAAGATATGAAACTATTAGATGCCCTACAATTTCCCTTATTCCTTGCAATTTTTCCCCATAACTTGATGGATTTCTTGGATGTTAATCCTATAATGCTATACATGGATACATGCAGATTTTTTAGGCTCTCCTCTACATCCTCTGCTGTGTTCAGTCCTTGTTCCGGCCCATCAAGTTCTGGCCCAAATTTTTCATCCCATCTGAAACATAACCCCTTATTCTGCATTGATAAGAACCAGTAATTTTCATACTAGTACAGGCTCCAATCGAACTACTTCTCACTGATTTGGAGTGACTTCCCTTATTTCTTGATTCCCAACTCACAACTTTAGAAGATGGATAACTCATGGGGACATTCCCACTTTTATTGGTTCCCGAATGGTTTTTATTCGACAACAAATTCTTTATGTCAATTCGCTGGGCATAATCCACCATTTCTACTAATGAACTCACAGGATGTAATTTCAATTTAGCCTTCACAAATCCCTCGAACCATTGAGGAAAAAAAATTAATTTGAGATACTTTCATCCCCTCTGTGCATGGTATTCCTCTACTGAGCCGGTTTTATTGTGACTCAACAATAATTCGTAAGGACTTTGAAGCATTGAAGGTTGAAATCTTTGAATAAGGACCGATTTGAATTCTTCCAATATCATTAATTCAATTACAGCATTATTCTAGACTAGGTTGGCCGGCCCATTGGCCATCTGCACATTGCACAAACCTTATTAATAGGAGGCCTACTAACAACAATATGGTGAAGTCTCAACTTAGGTGGTTTGGGCATGCGTGAGGGAGGAGGAGTCTTAGAGGCGCTAGTAAGGACTAAGGAGGGTCATTGACTATATAGATGATAGTGGAGACCAAGGAAAACCATATGCCAAACTGTTGAGAGAGGTTTTTAGGTAAATGAAATGGTCTATTTTTTAACTTAATGCATGAAGGTTTTATCGCTAGTCCATGGCACGTCTTCCATTCTTTAGTTCTCAGCTGTTTTTAGGTTTCCAAAATTGTCATTATCGACTCTATCTTAGTTCTTGGAAAACAAAGTTTAATGAAGTTTATCATATATACATAATTGAATTTAGTATCATGTCTTTAGATCTAACTTTGGTCATGACTCATGACAGTATGGCATATCCCCAGGAAAGCTCCTGAGCAATCAAAAGTTGTCTAGTTTTTTCGAGATCTTGACAATTTGCTCCGATGAAGATGATAAGGTAATCAATAACATGTTCCCTTTATAAGGTGATAGGGTTTGTAAATCGATCTTTTTCATATCATAATTTAATGAGCTTCCTTCATGAATAAAATCTAATACCAGTTATACTTGTTTTAGGTTTATGTTTCCACAGTACGTTCACGTAACTATCCCGTGACTGGCTTCCAATGGCATCCAGAGGTGATTGCAGTATTGTTAATTTCGATTCCCAAATCTTATTTAATTAAGATTGGAACTGCAGTCATGCACCACTTTTAGTTCATCTTTATTTCAGCTATGTAACATCCTTGTGAAATGATGCCTATAGAAAAATGTCTTTGAATGGGGACCAAAAAGTATTCCACACACGGAGGATGCCATTCGGACAACTCAGTATATTGCAAATTTTTTGGTCAGGTCAGGACTAAGTATTTTATAATGTCTTCATCCATTTATTGAATTTATGCTTACTGTTTACAATGACGAGAAGTATTATTCACCTTTTATGCTCTCGTGCTTATCAATGACTAACTTGACGTTTTTCTACTTTCACGGATCGGACTCCAGTGAAGCGAGGAAATCCTTAAACAGACCAGTTGCTCAAGATGTGTTAGACAGTCTCATTTACAATTACAGACCCACTTATTGTGGGTATGCAGGGTAAGCCTAAAATTTTCTTTACAACTTTCCTATTTTTTAGTTTTACATGTGAAGTTGCTTATGTAGATTTTTATGCTACTTGCAGGAAAGGATATGATGAAGTTTATATATTTGAATAA
Protein sequence

>MS.gene63713.t1

MSNVVVLFLFLISIFQCFHSTNSHSGILLPTELHRDSSPVSCPAPDPSLYYRPVIGIVSHPGDGASGRLSNATGANYIAASYVKFVEAGGARVVPLIYSEPWEILHKKLELVNGVLFTGGWAKEGLYFETVKKIFKIALEKNDAGDYFPVYGVCLGFELISMIVSEDNDILEEFSARSQASSLQFVDNTKMEGSVFQRFPPDLLKKLSTDCLVMQNHRYGISPGKLLSNQKLSSFFEILTICSDEDDKVYVSTVRSRNYPVTGFQWHPEKNVFEWGPKSIPHTEDAIRTTQYIANFLVSEARKSLNRPVAQDVLDSLIYNYRPTYCGYAGKGYDEVYIFE