AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66373

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66373.t1 MTR_6g090280 95.093 591 29 0 13 603 32 622 0.0 1107
MS.gene66373.t1 MTR_6g090280 95.148 474 23 0 130 603 1 474 0.0 936
MS.gene66373.t1 MTR_6g090280 95.175 456 22 0 13 468 32 487 0.0 840
MS.gene66373.t1 MTR_3g087950 51.858 565 259 4 39 602 28 580 0.0 539
MS.gene66373.t1 MTR_3g466000 49.365 551 266 4 53 602 37 575 3.04e-173 511
MS.gene66373.t1 MTR_6g090200 56.995 193 74 2 611 803 27 210 3.59e-72 235
MS.gene66373.t1 MTR_6g090230 85.000 60 9 0 676 735 47 106 5.12e-33 123
MS.gene66373.t1 MTR_5g041010 28.276 145 90 5 651 786 71 210 5.18e-14 72.8
MS.gene66373.t1 MTR_5g040940 29.032 155 95 6 651 795 72 221 6.61e-13 69.3
MS.gene66373.t1 MTR_5g459500 28.148 135 84 5 679 800 6 140 1.21e-11 63.5
MS.gene66373.t1 MTR_2g021910 32.110 109 69 3 672 779 302 406 2.10e-11 68.2
MS.gene66373.t1 MTR_5g084180 56.667 90 38 1 39 128 34 122 2.13e-11 62.4
MS.gene66373.t1 MTR_5g040960 27.703 148 93 5 651 789 73 215 3.11e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66373.t1 AT4G29210 61.837 566 207 3 45 603 73 636 0.0 725
MS.gene66373.t1 AT4G29210 66.118 425 143 1 45 468 73 497 0.0 603
MS.gene66373.t1 AT4G39640 49.824 568 267 6 37 602 19 570 0.0 557
MS.gene66373.t1 AT4G39640 49.824 568 267 6 37 602 19 570 0.0 557
MS.gene66373.t1 AT4G39650 50.995 553 254 5 53 602 38 576 0.0 550
MS.gene66373.t1 AT1G69820 56.818 220 93 1 299 516 1 220 3.10e-83 265
MS.gene66373.t1 AT1G26820 30.137 146 88 5 650 786 65 205 8.82e-14 72.0
MS.gene66373.t1 AT1G14220 33.333 147 87 6 648 786 68 211 6.24e-13 69.7

Find 210 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATGACCTCTTTCTTTC+AGG 0.132717 6.1:+78755413 None:intergenic
TTGAACATTAATAGGAAAAT+TGG 0.202572 6.1:-78755331 MS.gene66373:CDS
AAACACCTTTGAACATTAAT+AGG 0.206872 6.1:-78755339 MS.gene66373:CDS
GCTGGACAACCGCCCTTTCT+TGG 0.218253 6.1:+78755256 None:intergenic
TTTCTTAATCATTTCATCTT+AGG 0.220225 6.1:-78755648 MS.gene66373:CDS
GACCAATTGGTCGGGGTAAT+TGG 0.230354 6.1:-78755714 MS.gene66373:CDS
ATTAATGTTCAAAGGTGTTT+TGG 0.235557 6.1:+78755342 None:intergenic
CCTAATGGAACTTTGTTAAA+AGG 0.238512 6.1:-78756855 MS.gene66373:CDS
AGGTTGCGAATCTACTAAAA+AGG 0.270647 6.1:-78753031 MS.gene66373:CDS
ACAACTGTAAACAGGCATTT+TGG 0.272133 6.1:-78756039 MS.gene66373:CDS
AATAGTTTGTGCAAAAGATT+TGG 0.289247 6.1:+78756301 None:intergenic
GCCTTGTCGGTGGGAGTTCC+TGG 0.301944 6.1:-78757059 MS.gene66373:CDS
ACTGTGGAAACAGCTTTCTT+TGG 0.313465 6.1:-78752899 MS.gene66373:CDS
AATACCTTTGTAATGATAAT+AGG 0.314574 6.1:+78755868 None:intergenic
CCACGACTTAGTTGCTATAA+TGG 0.323052 6.1:-78752993 MS.gene66373:CDS
GATGCGGCAAAGGGAAATTT+AGG 0.331622 6.1:-78756428 MS.gene66373:CDS
ACCGGAGGTCGCTCCGTTAC+AGG 0.333100 6.1:-78754593 MS.gene66373:CDS
ATGTCGTGTTATCGAGTATT+TGG 0.336114 6.1:+78756273 None:intergenic
GATCCCGAAGCTAAGTTCTT+AGG 0.349300 6.1:-78757083 MS.gene66373:CDS
AAAAGATTTGGAAAGCATTT+CGG 0.357293 6.1:+78756313 None:intergenic
CATAACTGTCCAAGATGTTT+AGG 0.357912 6.1:+78756459 None:intergenic
AGAAATATTTATGCACCTAA+TGG 0.361307 6.1:-78756870 MS.gene66373:CDS
CTGGACAACCGCCCTTTCTT+GGG 0.375400 6.1:+78755257 None:intergenic
CTATCTTATGTAGCTATTAC+CGG 0.380165 6.1:-78755509 MS.gene66373:intron
TTGTTTCCTAGCAACTTTAC+CGG 0.385988 6.1:-78753450 MS.gene66373:intron
GTTTGCTATCCGAATGAACT+TGG 0.386944 6.1:-78756372 MS.gene66373:CDS
TGGGAAAAGCTTAGAGATAT+TGG 0.388713 6.1:-78756805 MS.gene66373:CDS
CGCTCCTTTAGCTGCTTCAC+AGG 0.391297 6.1:-78757782 MS.gene66373:intron
TGGAACACTCGCTCTTTCTC+TGG 0.400127 6.1:-78756601 MS.gene66373:intron
AAATTTCCCTTTGCCGCATC+CGG 0.401484 6.1:+78756431 None:intergenic
TCCTATAGCTGGTTGGAATA+AGG 0.404922 6.1:+78756980 None:intergenic
CTAAACATCTTGGACAGTTA+TGG 0.406327 6.1:-78756458 MS.gene66373:CDS
TCAATAAAGTTTGTTGGAGC+TGG 0.406868 6.1:+78755922 None:intergenic
TGATTTATTTATACTGCAGC+TGG 0.413156 6.1:+78755238 None:intergenic
TTTGGTTCAATAAAGTTTGT+TGG 0.416128 6.1:+78755916 None:intergenic
GTTGATGCAAATGCTAAGTT+AGG 0.417121 6.1:+78754526 None:intergenic
GGAGTTCCTGGTGAGTTAGC+TGG 0.418179 6.1:-78757047 MS.gene66373:CDS
ATTCCCTCCAGATTACTATA+TGG 0.419853 6.1:-78756252 MS.gene66373:CDS
TGGAGCTGGAGGTAGTTTAT+CGG 0.420316 6.1:+78755936 None:intergenic
TTCAATAACATGTGCCTGAT+TGG 0.423332 6.1:+78758020 None:intergenic
AGAATGTTAGTGCACAAATA+TGG 0.425176 6.1:-78758330 MS.gene66373:CDS
CATGTTATTGAATCGGAACT+TGG 0.426522 6.1:-78758009 MS.gene66373:CDS
CATATCATAAGCTTGTGCTT+TGG 0.431025 6.1:+78757813 None:intergenic
GGCACCTAAGAACTTAGCTT+CGG 0.431120 6.1:+78757079 None:intergenic
CGCCAATTACCCCGACCAAT+TGG 0.433200 6.1:+78755712 None:intergenic
CAGTTGGTGTTTCAATGCTT+AGG 0.435205 6.1:-78757954 MS.gene66373:CDS
CACTGACAACAACTGTAAAC+AGG 0.435211 6.1:-78756047 MS.gene66373:CDS
GGGATTCGTTCTACTTCAAC+TGG 0.435789 6.1:-78756012 MS.gene66373:CDS
TGCAATACAGGGACACAAGC+AGG 0.441253 6.1:-78753411 MS.gene66373:CDS
GCCTGTAACGGAGCGACCTC+CGG 0.443268 6.1:+78754592 None:intergenic
CACCTGTCCATATAGTAATC+TGG 0.445513 6.1:+78756245 None:intergenic
CAACCAAGTCAATGCAATAC+AGG 0.447200 6.1:-78753423 MS.gene66373:CDS
TAAGTTCTTAGGTGCCTTGT+CGG 0.447885 6.1:-78757072 MS.gene66373:CDS
GTGGCTGCTGCATTATGTGC+TGG 0.453463 6.1:-78757904 MS.gene66373:CDS
AACCTCCCTTGTTATATAGT+TGG 0.454594 6.1:+78753049 None:intergenic
CATTGCTTTGCAGCCGTCAC+CGG 0.456468 6.1:-78754611 MS.gene66373:intron
GATTTGAAGATCGGTCAGTA+TGG 0.458699 6.1:+78753088 None:intergenic
CAAGCTTCAAGTGGCATTGG+AGG 0.459603 6.1:-78757871 MS.gene66373:CDS
TTCCAAGCTTCAAGTGGCAT+TGG 0.459832 6.1:-78757874 MS.gene66373:CDS
AATGGCAGATTAGTAGCAAT+TGG 0.464870 6.1:-78752975 MS.gene66373:CDS
GTTTCCACAGTTATTATTGA+AGG 0.466416 6.1:+78752911 None:intergenic
ACCTTATTCCAACCAGCTAT+AGG 0.467125 6.1:-78756981 MS.gene66373:CDS
GTGGAAACAGCTTTCTTTGG+TGG 0.469254 6.1:-78752896 MS.gene66373:CDS
ATGATGTGAAGTATGAAAAC+AGG 0.470747 6.1:+78754499 None:intergenic
TAGCTGGCCTTCATGCAGCC+TGG 0.471043 6.1:-78757031 MS.gene66373:CDS
GTTTCAATGCTTAGGCTTGG+TGG 0.472280 6.1:-78757946 MS.gene66373:CDS
GGTAGGATGACCAATTGGTC+GGG 0.472855 6.1:-78755722 MS.gene66373:intron
GGAGCTGGAGGTAGTTTATC+GGG 0.474724 6.1:+78755937 None:intergenic
TTCTTAGGTGCCTTGTCGGT+GGG 0.475216 6.1:-78757068 MS.gene66373:CDS
CTCCAATGCCACTTGAAGCT+TGG 0.477295 6.1:+78757872 None:intergenic
GTCCCTGTATTGCATTGACT+TGG 0.480119 6.1:+78753420 None:intergenic
TTGTTCCATGATCTCTAAGT+TGG 0.481847 6.1:+78756109 None:intergenic
TGGAGCCAACTTAGAGATCA+TGG 0.482237 6.1:-78756114 MS.gene66373:CDS
GGTCTTAGAACGGCGTCTAA+AGG 0.484298 6.1:+78755618 None:intergenic
ATATAGTTGGCCGTTGGACC+AGG 0.485041 6.1:+78753062 None:intergenic
AGTTAGGAAAACTAGAACCA+TGG 0.486965 6.1:+78754542 None:intergenic
AGAAATACTTGAGTCACTGC+TGG 0.487765 6.1:+78755666 None:intergenic
TATTGTCGTCAATGATGAAA+TGG 0.487853 6.1:-78755989 MS.gene66373:CDS
TCGAGCTTTCAGAAGAAAGT+AGG 0.488027 6.1:-78755441 MS.gene66373:CDS
TGGAAACAGCTTTCTTTGGT+GGG 0.490417 6.1:-78752895 MS.gene66373:CDS
TGGACGTCCGGATGCGGCAA+AGG 0.495197 6.1:-78756438 MS.gene66373:CDS
TGAACAGGTCCTAAACATCT+TGG 0.496933 6.1:-78756468 MS.gene66373:intron
ACCAGGCTTGATTTGAAGAT+CGG 0.497308 6.1:+78753079 None:intergenic
GTAAAGGATGTCGCAGAAGT+TGG 0.501496 6.1:-78756732 MS.gene66373:CDS
TGCAGGATGGAAGAGTGGAC+AGG 0.505632 6.1:-78758305 MS.gene66373:CDS
CTTGTTATATAGTTGGCCGT+TGG 0.505968 6.1:+78753056 None:intergenic
GCACCTAAGAACTTAGCTTC+GGG 0.506268 6.1:+78757080 None:intergenic
CAGTGATACCGCATTTCTAT+CGG 0.506581 6.1:+78756065 None:intergenic
TCAGGCACATGTTATTGAAT+CGG 0.506608 6.1:-78758016 MS.gene66373:CDS
CGGCATCTACAACACATGTA+TGG 0.507054 6.1:+78756085 None:intergenic
GGTGTTTCAATGCTTAGGCT+TGG 0.510369 6.1:-78757949 MS.gene66373:CDS
ACCGATCTTCAAATCAAGCC+TGG 0.511034 6.1:-78753080 MS.gene66373:CDS
AGCAGTAAGTGACCCAAGAA+AGG 0.511217 6.1:-78755269 MS.gene66373:CDS
GGCATTTGTGTGGATGCAAA+TGG 0.511375 6.1:-78752954 MS.gene66373:CDS
ACTTTATTGAACCAAACAAA+AGG 0.512088 6.1:-78755909 MS.gene66373:CDS
GCTTCAAGTGGCATTGGAGG+CGG 0.513180 6.1:-78757868 MS.gene66373:CDS
CTCCAGATTACTATATGGAC+AGG 0.513873 6.1:-78756247 MS.gene66373:intron
CTTGGACAGTTATGGACGTC+CGG 0.513907 6.1:-78756450 MS.gene66373:CDS
GCAATGACTGTCAATGTAAT+GGG 0.514126 6.1:-78756657 MS.gene66373:CDS
TGCAATGACTGTCAATGTAA+TGG 0.515938 6.1:-78756658 MS.gene66373:CDS
GTTCTTAGGTGCCTTGTCGG+TGG 0.517069 6.1:-78757069 MS.gene66373:CDS
TGGTAGGATGACCAATTGGT+CGG 0.518968 6.1:-78755723 MS.gene66373:intron
TGCAAACACTAGTAGAAACT+TGG 0.519382 6.1:+78754570 None:intergenic
CTTTACTAACTTCTCACCAA+TGG 0.521616 6.1:+78756749 None:intergenic
TTAGAGATATTGGCCGAGGA+AGG 0.522470 6.1:-78756795 MS.gene66373:CDS
GGGGTAATTGGCGCAAGCGG+TGG 0.523871 6.1:-78755702 MS.gene66373:CDS
AGAACCTTGGTATAGACCCT+TGG 0.525421 6.1:+78755597 None:intergenic
CAAACCTGTGAAGCAGCTAA+AGG 0.526128 6.1:+78757778 None:intergenic
CTAGTGTTTGCATCCGCCCA+TGG 0.527435 6.1:-78754559 MS.gene66373:CDS
GCTAGGTATTCTTCGAGTGT+AGG 0.528040 6.1:+78756930 None:intergenic
ATCAAGTTACTTACATCTTG+TGG 0.528282 6.1:+78753375 None:intergenic
GCTTTCTACAATGGAACCAT+TGG 0.530567 6.1:-78756765 MS.gene66373:CDS
AATGGAACTTTGTTAAAAGG+AGG 0.531771 6.1:-78756852 MS.gene66373:CDS
AGAGCGAGTGTTCCACTTGA+AGG 0.532850 6.1:+78756609 None:intergenic
TAAGAACTTAGCTTCGGGAT+CGG 0.533300 6.1:+78757085 None:intergenic
TTTCCACAGTTATTATTGAA+GGG 0.535981 6.1:+78752912 None:intergenic
TAGACGCCGTTCTAAGACCA+AGG 0.538451 6.1:-78755614 MS.gene66373:CDS
CACAAATATGGTGTGCAGGA+TGG 0.538780 6.1:-78758318 MS.gene66373:CDS
ATGTGTAGTAATATAGAACA+TGG 0.539717 6.1:-78756825 MS.gene66373:CDS
GGACGTCCGGATGCGGCAAA+GGG 0.539848 6.1:-78756437 MS.gene66373:CDS
TTTGCTATCCGAATGAACTT+GGG 0.542750 6.1:-78756371 MS.gene66373:CDS
CAGTTATGGACGTCCGGATG+CGG 0.543584 6.1:-78756444 MS.gene66373:CDS
ATGGAACTTTGTTAAAAGGA+GGG 0.545372 6.1:-78756851 MS.gene66373:CDS
GAAAGCTTGTGGCCCTTCCT+CGG 0.549195 6.1:+78756782 None:intergenic
TGTAATGATAATAGGAGTCA+TGG 0.551561 6.1:+78755876 None:intergenic
TGCTTTGCAGCCGTCACCGG+AGG 0.556113 6.1:-78754608 MS.gene66373:intron
CATGCAGCCTGGTTGAAACA+TGG 0.558759 6.1:-78757020 MS.gene66373:CDS
CGGTCAGTATGGTGAAAAGC+GGG 0.559962 6.1:+78753099 None:intergenic
GTCGGGGTAATTGGCGCAAG+CGG 0.560004 6.1:-78755705 MS.gene66373:CDS
GTTGTTGGGCTAGGAGTAAG+AGG 0.560853 6.1:-78758099 MS.gene66373:CDS
TAGAGATATTGGCCGAGGAA+GGG 0.564292 6.1:-78756794 MS.gene66373:CDS
ACATGCTGTTGATGCTGCAG+TGG 0.566572 6.1:-78757923 MS.gene66373:CDS
GCTTTGGTAGGATGACCAAT+TGG 0.567094 6.1:-78755727 MS.gene66373:intron
GCATTGACTTGGTTGCCCAC+CGG 0.567297 6.1:+78753431 None:intergenic
GCAGTAAGTGACCCAAGAAA+GGG 0.568353 6.1:-78755268 MS.gene66373:CDS
TAGGTTTCTTCGATAAAGCA+AGG 0.571284 6.1:-78753263 MS.gene66373:CDS
CATTGGTGAGAAGTTAGTAA+AGG 0.573031 6.1:-78756748 MS.gene66373:CDS
AAAAGATAATGAGCGATCCT+GGG 0.573268 6.1:-78756896 MS.gene66373:CDS
TTGCTATCCGAATGAACTTG+GGG 0.574297 6.1:-78756370 MS.gene66373:CDS
CAATCTTCCATGTTTCAACC+AGG 0.574776 6.1:+78757013 None:intergenic
TTCCTAGCAACTTTACCGGT+GGG 0.576163 6.1:-78753446 MS.gene66373:intron
ATAAAGTTTGTTGGAGCTGG+AGG 0.577647 6.1:+78755925 None:intergenic
AGTGTTCCACTTGAAGGAGG+TGG 0.579625 6.1:+78756615 None:intergenic
GATGCTCGGTGTTCTGCAGT+TGG 0.579738 6.1:-78757970 MS.gene66373:CDS
GCAGGATGGAAGAGTGGACA+GGG 0.581020 6.1:-78758304 MS.gene66373:CDS
AGCAAGGTCTTAACTACGCG+TGG 0.581811 6.1:-78753247 MS.gene66373:CDS
CAACGGCCAACTATATAACA+AGG 0.582321 6.1:-78753055 MS.gene66373:CDS
AAGGATGTCGCAGAAGTTGG+TGG 0.583060 6.1:-78756729 MS.gene66373:CDS
TGGAACTTTGTTAAAAGGAG+GGG 0.583276 6.1:-78756850 MS.gene66373:CDS
AGTGCACAAATATGGTGTGC+AGG 0.583406 6.1:-78758322 MS.gene66373:CDS
AGTAGAAACTTGGCCTGTAA+CGG 0.583771 6.1:+78754580 None:intergenic
TCGCAAGTCCTATAGCTGGT+TGG 0.585935 6.1:+78756973 None:intergenic
TCAAATCAAGCCTGGTCCAA+CGG 0.585965 6.1:-78753072 MS.gene66373:CDS
AACGGAGCGACCTCCGGTGA+CGG 0.586529 6.1:+78754598 None:intergenic
CCATTATAGCAACTAAGTCG+TGG 0.588062 6.1:+78752993 None:intergenic
GGTTGGAATAAGGTCTTCCA+TGG 0.589767 6.1:+78756990 None:intergenic
GGGCCACAAGCTTTCTACAA+TGG 0.590382 6.1:-78756774 MS.gene66373:CDS
GGAGGATTTACGAAATTACA+AGG 0.592285 6.1:-78756694 MS.gene66373:CDS
GTTCCATTGTAGAAAGCTTG+TGG 0.594214 6.1:+78756771 None:intergenic
CATCAACTGTGTGCATGTCA+AGG 0.594909 6.1:-78755397 MS.gene66373:CDS
GTTAGGAAAACTAGAACCAT+GGG 0.595144 6.1:+78754543 None:intergenic
GTAGGATGACCAATTGGTCG+GGG 0.600898 6.1:-78755721 MS.gene66373:intron
TTGTTGCAGCAGATGATGCT+CGG 0.601090 6.1:-78757984 MS.gene66373:CDS
GTAATGGGATATACTATACA+TGG 0.601724 6.1:-78756642 MS.gene66373:CDS
GGGAGATATATCAGTAGGTG+TGG 0.603874 6.1:+78755957 None:intergenic
TGTGTGGATGCAAATGGAGA+TGG 0.605243 6.1:-78752948 MS.gene66373:CDS
TTTCCTAGCAACTTTACCGG+TGG 0.605679 6.1:-78753447 MS.gene66373:intron
ATACTGGTTGTAGTCTGCGT+AGG 0.606917 6.1:+78753160 None:intergenic
GTTTCAACCAGGCTGCATGA+AGG 0.615001 6.1:+78757024 None:intergenic
GGAATGCCACCTCCTTCAAG+TGG 0.615362 6.1:-78756621 MS.gene66373:CDS
TGAAGGCCAGCTAACTCACC+AGG 0.618272 6.1:+78757041 None:intergenic
AGACGCCGTTCTAAGACCAA+GGG 0.619283 6.1:-78755613 MS.gene66373:CDS
GCATAAATATTTCTTAACCC+AGG 0.620188 6.1:+78756879 None:intergenic
AGTAGCAATTGGCATTTGTG+TGG 0.621434 6.1:-78752964 MS.gene66373:CDS
CATTATAGCAACTAAGTCGT+GGG 0.621624 6.1:+78752994 None:intergenic
TGTGTAGTAATATAGAACAT+GGG 0.622103 6.1:-78756824 MS.gene66373:CDS
ACCAGGAACTCCCACCGACA+AGG 0.623658 6.1:+78757058 None:intergenic
AATCCCTTCAATAATAACTG+TGG 0.623885 6.1:-78752915 MS.gene66373:CDS
GACTCCTATTATCATTACAA+AGG 0.623955 6.1:-78755872 MS.gene66373:intron
TTATCGGGAGATATATCAGT+AGG 0.628198 6.1:+78755952 None:intergenic
AACCAAGTCAATGCAATACA+GGG 0.634201 6.1:-78753422 MS.gene66373:CDS
AAGCTTAGAGATATTGGCCG+AGG 0.639552 6.1:-78756799 MS.gene66373:CDS
GCAATACAGGGACACAAGCA+GGG 0.641412 6.1:-78753410 MS.gene66373:CDS
ATAGACCCTTGGTCTTAGAA+CGG 0.641982 6.1:+78755608 None:intergenic
TCTAAACAATGGGATACTCA+TGG 0.645478 6.1:-78753191 MS.gene66373:CDS
TCGGTCAGTATGGTGAAAAG+CGG 0.647678 6.1:+78753098 None:intergenic
GCGAGTGTTCCACTTGAAGG+AGG 0.652330 6.1:+78756612 None:intergenic
TGTCCATATAGTAATCTGGA+GGG 0.652873 6.1:+78756249 None:intergenic
TGAAACATGGAAGATTGCCA+TGG 0.657492 6.1:-78757007 MS.gene66373:CDS
CTGTCCATATAGTAATCTGG+AGG 0.661395 6.1:+78756248 None:intergenic
ATTATTACACCATGTTAAGG+CGG 0.661598 6.1:+78752870 None:intergenic
TGGTGTGCAGGATGGAAGAG+TGG 0.665762 6.1:-78758310 MS.gene66373:CDS
ATAGGAGTCATGGAGGACAA+TGG 0.668243 6.1:+78755886 None:intergenic
ATCGATTTGCATGTAAAGCG+CGG 0.673961 6.1:-78755301 MS.gene66373:CDS
AGGGACAGAAAGATATAACG+AGG 0.678411 6.1:-78758052 MS.gene66373:CDS
GGGACAGAAAGATATAACGA+GGG 0.681422 6.1:-78758051 MS.gene66373:CDS
CTGTGAAGCAGCTAAAGGAG+CGG 0.689058 6.1:+78757783 None:intergenic
AAGACCAAGGGTCTATACCA+AGG 0.689511 6.1:-78755601 MS.gene66373:intron
AGGAAAACTAGAACCATGGG+CGG 0.691463 6.1:+78754546 None:intergenic
GTAAGTGACCCAAGAAAGGG+CGG 0.698577 6.1:-78755265 MS.gene66373:CDS
TGCTATCCGAATGAACTTGG+GGG 0.699431 6.1:-78756369 MS.gene66373:CDS
GGCCAACTATATAACAAGGG+AGG 0.715501 6.1:-78753051 MS.gene66373:CDS
AACGGCCAACTATATAACAA+GGG 0.722026 6.1:-78753054 MS.gene66373:CDS
AACTTGATTGATCGTGACGG+TGG 0.723315 6.1:-78755469 MS.gene66373:CDS
AATGATAATAGGAGTCATGG+AGG 0.729975 6.1:+78755879 None:intergenic
TGTAGATGCCGATAGAAATG+CGG 0.739096 6.1:-78756073 MS.gene66373:CDS
GAAAACTTGATTGATCGTGA+CGG 0.747389 6.1:-78755472 MS.gene66373:CDS
TACGCGTGGATCAATTACAG+TGG 0.751161 6.1:-78753233 MS.gene66373:CDS
GGATTTACGAAATTACAAGG+TGG 0.751484 6.1:-78756691 MS.gene66373:CDS
CAGGATGGAAGAGTGGACAG+GGG 0.770776 6.1:-78758303 MS.gene66373:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTCATTATTTAAC+CGG - chr6.1:78756046-78756065 MS.gene66373:CDS 10.0%
!! TGAAAATAAAAATAAATTTC+GGG - chr6.1:78756815-78756834 MS.gene66373:CDS 10.0%
!! AAGAAAACTAAAACATAAAA+TGG - chr6.1:78756502-78756521 MS.gene66373:intron 15.0%
!! ATTTATTACAAGATTATCTA+TGG - chr6.1:78755436-78755455 MS.gene66373:CDS 15.0%
!!! AAAAAAATTGCAACTTTTAT+TGG - chr6.1:78756241-78756260 MS.gene66373:intron 15.0%
!!! AGTTTTCTTTGTAAATTTTT+TGG + chr6.1:78756491-78756510 None:intergenic 15.0%
!!! TTGATTTCTTGATATTTTAT+AGG - chr6.1:78757929-78757948 MS.gene66373:CDS 15.0%
!! AAAGTAAAAGACAAATTACA+TGG - chr6.1:78756318-78756337 MS.gene66373:CDS 20.0%
!! AAGAAACTATTTCAATACAA+AGG + chr6.1:78755644-78755663 None:intergenic 20.0%
!! AATACCTTTGTAATGATAAT+AGG + chr6.1:78755346-78755365 None:intergenic 20.0%
!! ATATTGACAATAAAAAGTCA+AGG + chr6.1:78756765-78756784 None:intergenic 20.0%
!! TATTTGCATTTACTTTGATT+AGG + chr6.1:78757462-78757481 None:intergenic 20.0%
!! TTATTCATGCAATATTCTAA+TGG + chr6.1:78757698-78757717 None:intergenic 20.0%
!! TTGAACATTAATAGGAAAAT+TGG - chr6.1:78755880-78755899 MS.gene66373:CDS 20.0%
!! TTTCTTAATCATTTCATCTT+AGG - chr6.1:78755563-78755582 MS.gene66373:intron 20.0%
!!! AAAAAGGATTAGAGTATTTA+TGG + chr6.1:78756543-78756562 None:intergenic 20.0%
!!! ATGTAATTTGTCTTTTACTT+TGG + chr6.1:78756319-78756338 None:intergenic 20.0%
!!! ATTTTCCTATTAATGTTCAA+AGG + chr6.1:78755880-78755899 None:intergenic 20.0%
!!! TTGTAAATTTTTTGGCTAAA+TGG + chr6.1:78756483-78756502 None:intergenic 20.0%
!!! TTTCAGAAATGAAGTTTTAA+TGG + chr6.1:78753954-78753973 None:intergenic 20.0%
!!! TTTCATTATATAAGAAGCAT+GGG + chr6.1:78756800-78756819 None:intergenic 20.0%
!!! TTTTCATTATATAAGAAGCA+TGG + chr6.1:78756801-78756820 None:intergenic 20.0%
! AAAAAAATAGCTTAGGCAAA+TGG + chr6.1:78757381-78757400 None:intergenic 25.0%
! AAACAACAGAAAAGATCAAA+GGG + chr6.1:78753817-78753836 None:intergenic 25.0%
! AAACACCTTTGAACATTAAT+AGG - chr6.1:78755872-78755891 MS.gene66373:intron 25.0%
! AAGCATACAAATATAGGATA+AGG + chr6.1:78754698-78754717 None:intergenic 25.0%
! ACATACAAATTTAGAGAATG+GGG - chr6.1:78752959-78752978 MS.gene66373:CDS 25.0%
! ACCAACACAATTAATGTAAA+AGG - chr6.1:78757231-78757250 MS.gene66373:intron 25.0%
! ACTTTATTGAACCAAACAAA+AGG - chr6.1:78755302-78755321 MS.gene66373:CDS 25.0%
! AGAAATATTTATGCACCTAA+TGG - chr6.1:78754341-78754360 MS.gene66373:intron 25.0%
! ATATCCAACAATGAAGAATT+TGG - chr6.1:78757304-78757323 MS.gene66373:intron 25.0%
! ATCACAATTAGATTGTAGTT+AGG + chr6.1:78755680-78755699 None:intergenic 25.0%
! ATGTGTAGTAATATAGAACA+TGG - chr6.1:78754386-78754405 MS.gene66373:intron 25.0%
! ATTACAAGATTATCTATGGT+TGG - chr6.1:78755440-78755459 MS.gene66373:CDS 25.0%
! ATTATAAAGCTATATTCTGG+AGG + chr6.1:78757734-78757753 None:intergenic 25.0%
! ATTGCATTTAGCATAAGATA+AGG + chr6.1:78753083-78753102 None:intergenic 25.0%
! CAAATTCTTAATTCATGTTG+TGG - chr6.1:78753852-78753871 MS.gene66373:intron 25.0%
! CAATACAAGCATACAAATAT+AGG + chr6.1:78754704-78754723 None:intergenic 25.0%
! CCAAATCAAAAAATTGATAC+TGG + chr6.1:78758070-78758089 None:intergenic 25.0%
! CCTGATAAAAAAAATAGCTT+AGG + chr6.1:78757388-78757407 None:intergenic 25.0%
! GACATACAAATTTAGAGAAT+GGG - chr6.1:78752958-78752977 MS.gene66373:CDS 25.0%
! GCTTGTATTGTATATTCTAA+TGG - chr6.1:78754714-78754733 MS.gene66373:intron 25.0%
! GTTCAGCATATCATATAAAT+TGG + chr6.1:78757125-78757144 None:intergenic 25.0%
! TAAACAACAGAAAAGATCAA+AGG + chr6.1:78753818-78753837 None:intergenic 25.0%
! TAATATTCATGTCAGATAGA+AGG + chr6.1:78757157-78757176 None:intergenic 25.0%
! TCGATTATAAAGCTATATTC+TGG + chr6.1:78757737-78757756 None:intergenic 25.0%
! TGTGTAGTAATATAGAACAT+GGG - chr6.1:78754387-78754406 MS.gene66373:intron 25.0%
! TTAATGTGACAGTGAAAAAT+TGG - chr6.1:78757193-78757212 MS.gene66373:intron 25.0%
! TTTCCACAGTTATTATTGAA+GGG + chr6.1:78758302-78758321 None:intergenic 25.0%
!! AAAAACACCACAACTATTTT+CGG + chr6.1:78753688-78753707 None:intergenic 25.0%
!! AATAGTTTGTGCAAAAGATT+TGG + chr6.1:78754913-78754932 None:intergenic 25.0%
!! ACCTTTTACATTAATTGTGT+TGG + chr6.1:78757235-78757254 None:intergenic 25.0%
!! ATTTTTGTAGATTTCTGCAA+AGG + chr6.1:78754055-78754074 None:intergenic 25.0%
!! TGCACTAATATTTTCAAAGT+CGG + chr6.1:78754871-78754890 None:intergenic 25.0%
!! TTACTCATACCTTTTACAAT+AGG - chr6.1:78757638-78757657 MS.gene66373:intron 25.0%
!! TTTGGTTCAATAAAGTTTGT+TGG + chr6.1:78755298-78755317 None:intergenic 25.0%
!!! AAAAGATTTGGAAAGCATTT+CGG + chr6.1:78754901-78754920 None:intergenic 25.0%
!!! ACAAGTTTTTGGATATTGAA+AGG - chr6.1:78753139-78753158 MS.gene66373:CDS 25.0%
!!! ATTAATGTTCAAAGGTGTTT+TGG + chr6.1:78755872-78755891 None:intergenic 25.0%
!!! CAAGTTTTTGGATATTGAAA+GGG - chr6.1:78753140-78753159 MS.gene66373:CDS 25.0%
!!! CATATAAATTGGTAGTCTTT+TGG + chr6.1:78757114-78757133 None:intergenic 25.0%
!!! CCAGTATCAATTTTTTGATT+TGG - chr6.1:78758067-78758086 MS.gene66373:CDS 25.0%
!!! CCTAAGCTATTTTTTTTATC+AGG - chr6.1:78757385-78757404 MS.gene66373:intron 25.0%
!!! GAATATAGCTTTATAATCGA+TGG - chr6.1:78757737-78757756 MS.gene66373:intron 25.0%
!!! TCTTTTTTTCATCATTAGCT+AGG + chr6.1:78754301-78754320 None:intergenic 25.0%
!!! TTAATGTTCAAAGGTGTTTT+GGG + chr6.1:78755871-78755890 None:intergenic 25.0%
AAAGACAATCTTTCAGACAT+TGG - chr6.1:78756926-78756945 MS.gene66373:CDS 30.0%
AAATATCATCGAGTACAGAA+GGG + chr6.1:78754651-78754670 None:intergenic 30.0%
AATCCCTTCAATAATAACTG+TGG - chr6.1:78758296-78758315 MS.gene66373:intron 30.0%
AATCTACTAAAAAGGGTAAC+TGG - chr6.1:78758188-78758207 MS.gene66373:intron 30.0%
AATGGAACTTTGTTAAAAGG+AGG - chr6.1:78754359-78754378 MS.gene66373:intron 30.0%
ACATCATAAAGCACATGTAA+TGG - chr6.1:78756728-78756747 MS.gene66373:CDS 30.0%
ACGATGATAATCAACATAAC+TGG - chr6.1:78756966-78756985 MS.gene66373:CDS 30.0%
ACTTTGATTAGGTGATGATT+AGG + chr6.1:78757451-78757470 None:intergenic 30.0%
ATCAAGTTACTTACATCTTG+TGG + chr6.1:78757839-78757858 None:intergenic 30.0%
ATGAGTTTCAACCTCTTAAA+TGG + chr6.1:78753480-78753499 None:intergenic 30.0%
ATGATGTGAAGTATGAAAAC+AGG + chr6.1:78756715-78756734 None:intergenic 30.0%
ATGGAACTTTGTTAAAAGGA+GGG - chr6.1:78754360-78754379 MS.gene66373:intron 30.0%
ATTGTCTTTAACCAATACCA+AGG + chr6.1:78756915-78756934 None:intergenic 30.0%
CAGCTTCGAAAAAAATTATC+AGG + chr6.1:78752996-78753015 None:intergenic 30.0%
CCTAATGGAACTTTGTTAAA+AGG - chr6.1:78754356-78754375 MS.gene66373:intron 30.0%
CTATCTTATGTAGCTATTAC+CGG - chr6.1:78755702-78755721 MS.gene66373:CDS 30.0%
GAATAGATTGTAACAATGAC+CGG + chr6.1:78756081-78756100 None:intergenic 30.0%
GACTCCTATTATCATTACAA+AGG - chr6.1:78755339-78755358 MS.gene66373:CDS 30.0%
GCATAAATATTTCTTAACCC+AGG + chr6.1:78754335-78754354 None:intergenic 30.0%
GGAAAAAATTCCATCCAATT+TGG - chr6.1:78756987-78757006 MS.gene66373:CDS 30.0%
GGACATACAAATTTAGAGAA+TGG - chr6.1:78752957-78752976 MS.gene66373:CDS 30.0%
GTTTCCACAGTTATTATTGA+AGG + chr6.1:78758303-78758322 None:intergenic 30.0%
TAGCCTAAGTCACAAATAAT+AGG - chr6.1:78757085-78757104 MS.gene66373:CDS 30.0%
TAGTGATCTTAATCATCAGA+CGG + chr6.1:78756452-78756471 None:intergenic 30.0%
TATTGTCGTCAATGATGAAA+TGG - chr6.1:78755222-78755241 MS.gene66373:intron 30.0%
TCATACTGTCCTATTGTAAA+AGG + chr6.1:78757650-78757669 None:intergenic 30.0%
TGATTTATTTATACTGCAGC+TGG + chr6.1:78755976-78755995 None:intergenic 30.0%
TGTAATGATAATAGGAGTCA+TGG + chr6.1:78755338-78755357 None:intergenic 30.0%
TGTAGTGATTAATGTCATTC+TGG + chr6.1:78757040-78757059 None:intergenic 30.0%
TTCTAATGGTTAGTATGAAC+AGG - chr6.1:78754728-78754747 MS.gene66373:intron 30.0%
! ACGATCAATCAAGTTTTCAT+AGG + chr6.1:78755737-78755756 None:intergenic 30.0%
! AGCTTTTATCAAAATGGACA+TGG + chr6.1:78757331-78757350 None:intergenic 30.0%
! CACACAAGCTTTTATCAAAA+TGG + chr6.1:78757337-78757356 None:intergenic 30.0%
! CACTAATATTTTCAAAGTCG+GGG + chr6.1:78754869-78754888 None:intergenic 30.0%
! CCTTTTAACAAAGTTCCATT+AGG + chr6.1:78754359-78754378 None:intergenic 30.0%
! GCACTAATATTTTCAAAGTC+GGG + chr6.1:78754870-78754889 None:intergenic 30.0%
! GGAGAGTTTCTTATTTCTTT+CGG + chr6.1:78753575-78753594 None:intergenic 30.0%
! GTAATGGGATATACTATACA+TGG - chr6.1:78754569-78754588 MS.gene66373:CDS 30.0%
! TAAGAGGAAACACAAGTTTT+TGG - chr6.1:78753128-78753147 MS.gene66373:CDS 30.0%
! TTTTCATAGGAAACTGTATC+CGG + chr6.1:78755724-78755743 None:intergenic 30.0%
! TTTTTATCAGGAACTAGAAG+TGG - chr6.1:78757397-78757416 MS.gene66373:intron 30.0%
!! TACACTTCATTTTGTTGCTT+TGG - chr6.1:78755468-78755487 MS.gene66373:CDS 30.0%
!! TCAGTTTTGGTCTAAACAAT+GGG - chr6.1:78758010-78758029 MS.gene66373:CDS 30.0%
!! TTCAGTTTTGGTCTAAACAA+TGG - chr6.1:78758009-78758028 MS.gene66373:CDS 30.0%
!!! TGGTGTTTTTAGAAATGTAG+CGG - chr6.1:78753698-78753717 MS.gene66373:intron 30.0%
!!! TTTTTTTCGAAGCTGAAAAG+CGG - chr6.1:78753001-78753020 MS.gene66373:CDS 30.0%
AAAAAGATAATGAGCGATCC+TGG - chr6.1:78754314-78754333 MS.gene66373:intron 35.0%
AAAAGATAATGAGCGATCCT+GGG - chr6.1:78754315-78754334 MS.gene66373:intron 35.0%
AAAAGATCAAAGGGAAGAGA+AGG + chr6.1:78753808-78753827 None:intergenic 35.0%
AACCAAGTCAATGCAATACA+GGG - chr6.1:78757789-78757808 MS.gene66373:CDS 35.0%
AACGGCCAACTATATAACAA+GGG - chr6.1:78758157-78758176 MS.gene66373:intron 35.0%
AATAAGAAACTCTCCACTAG+TGG - chr6.1:78753580-78753599 MS.gene66373:intron 35.0%
AATCGTATTCATCGTCGTAA+TGG + chr6.1:78757597-78757616 None:intergenic 35.0%
AATGAGCTCATTGTCATTGA+AGG - chr6.1:78752936-78752955 MS.gene66373:CDS 35.0%
AATGATAATAGGAGTCATGG+AGG + chr6.1:78755335-78755354 None:intergenic 35.0%
AATGGCAGATTAGTAGCAAT+TGG - chr6.1:78758236-78758255 MS.gene66373:intron 35.0%
AATTTAGAGAATGGGGTTGA+AGG - chr6.1:78752966-78752985 MS.gene66373:CDS 35.0%
AGGTTGCGAATCTACTAAAA+AGG - chr6.1:78758180-78758199 MS.gene66373:intron 35.0%
AGTTAGGAAAACTAGAACCA+TGG + chr6.1:78756672-78756691 None:intergenic 35.0%
ATACAAAGGAGTTAGAACCT+TGG + chr6.1:78755630-78755649 None:intergenic 35.0%
ATGTCGTGTTATCGAGTATT+TGG + chr6.1:78754941-78754960 None:intergenic 35.0%
ATTCCCTCCAGATTACTATA+TGG - chr6.1:78754959-78754978 MS.gene66373:intron 35.0%
ATTTAACCGGAACATTTGTC+CGG - chr6.1:78756059-78756078 MS.gene66373:CDS 35.0%
CAGCCTATTATTTGTGACTT+AGG + chr6.1:78757091-78757110 None:intergenic 35.0%
CATAACTGTCCAAGATGTTT+AGG + chr6.1:78754755-78754774 None:intergenic 35.0%
CATATCATAAGCTTGTGCTT+TGG + chr6.1:78753401-78753420 None:intergenic 35.0%
CATGTTATTGAATCGGAACT+TGG - chr6.1:78753202-78753221 MS.gene66373:CDS 35.0%
CATTATAGCAACTAAGTCGT+GGG + chr6.1:78758220-78758239 None:intergenic 35.0%
CATTGGTGAGAAGTTAGTAA+AGG - chr6.1:78754463-78754482 MS.gene66373:intron 35.0%
CTAAACATCTTGGACAGTTA+TGG - chr6.1:78754753-78754772 MS.gene66373:intron 35.0%
CTTTACTAACTTCTCACCAA+TGG + chr6.1:78754465-78754484 None:intergenic 35.0%
GAAAACTTGATTGATCGTGA+CGG - chr6.1:78755739-78755758 MS.gene66373:intron 35.0%
GAAATATCATCGAGTACAGA+AGG + chr6.1:78754652-78754671 None:intergenic 35.0%
GATTGACAATCCAAATTGGA+TGG + chr6.1:78757000-78757019 None:intergenic 35.0%
GCAATGACTGTCAATGTAAT+GGG - chr6.1:78754554-78754573 MS.gene66373:CDS 35.0%
GGAGGATTTACGAAATTACA+AGG - chr6.1:78754517-78754536 MS.gene66373:CDS 35.0%
GGATTTACGAAATTACAAGG+TGG - chr6.1:78754520-78754539 MS.gene66373:CDS 35.0%
GGTTGCGAATCTACTAAAAA+GGG - chr6.1:78758181-78758200 MS.gene66373:intron 35.0%
GTTAGGAAAACTAGAACCAT+GGG + chr6.1:78756671-78756690 None:intergenic 35.0%
GTTCGATTGACAATCCAAAT+TGG + chr6.1:78757004-78757023 None:intergenic 35.0%
GTTGATGCAAATGCTAAGTT+AGG + chr6.1:78756688-78756707 None:intergenic 35.0%
TAGGTTTCTTCGATAAAGCA+AGG - chr6.1:78757948-78757967 MS.gene66373:CDS 35.0%
TCAGGCACATGTTATTGAAT+CGG - chr6.1:78753195-78753214 MS.gene66373:CDS 35.0%
TCTAAACAATGGGATACTCA+TGG - chr6.1:78758020-78758039 MS.gene66373:CDS 35.0%
TGCAAACACTAGTAGAAACT+TGG + chr6.1:78756644-78756663 None:intergenic 35.0%
TGCAATGACTGTCAATGTAA+TGG - chr6.1:78754553-78754572 MS.gene66373:CDS 35.0%
TGGAACTTTGTTAAAAGGAG+GGG - chr6.1:78754361-78754380 MS.gene66373:intron 35.0%
TGGACCAAATTCTTCATTGT+TGG + chr6.1:78757311-78757330 None:intergenic 35.0%
TGGGAAAAGCTTAGAGATAT+TGG - chr6.1:78754406-78754425 MS.gene66373:intron 35.0%
TGTCCATATAGTAATCTGGA+GGG + chr6.1:78754965-78754984 None:intergenic 35.0%
TTATCGGGAGATATATCAGT+AGG + chr6.1:78755262-78755281 None:intergenic 35.0%
TTCAATAACATGTGCCTGAT+TGG + chr6.1:78753194-78753213 None:intergenic 35.0%
TTGTTCCATGATCTCTAAGT+TGG + chr6.1:78755105-78755124 None:intergenic 35.0%
TTGTTTCCTAGCAACTTTAC+CGG - chr6.1:78757761-78757780 MS.gene66373:intron 35.0%
TTTAACCAATACCAAGGATC+CGG + chr6.1:78756909-78756928 None:intergenic 35.0%
TTTCTGCTACACCATTTAAG+AGG - chr6.1:78753466-78753485 MS.gene66373:intron 35.0%
! AAAGCTATATTCTGGAGGTT+TGG + chr6.1:78757729-78757748 None:intergenic 35.0%
! AACCTCCCTTGTTATATAGT+TGG + chr6.1:78758165-78758184 None:intergenic 35.0%
! AACGTGAATTTTGTACTGTC+CGG - chr6.1:78753652-78753671 MS.gene66373:intron 35.0%
! ACAACTGTAAACAGGCATTT+TGG - chr6.1:78755172-78755191 MS.gene66373:intron 35.0%
! ACTTAGGCTATGATGAGTTT+TGG + chr6.1:78757075-78757094 None:intergenic 35.0%
! CATGTTTCTACGTAACAACA+TGG + chr6.1:78754674-78754693 None:intergenic 35.0%
! GCAATTCTTTTCCAGTTGTT+GGG - chr6.1:78753098-78753117 MS.gene66373:CDS 35.0%
! GGAAGGATGAATAAAGTGTT+TGG - chr6.1:78756130-78756149 MS.gene66373:intron 35.0%
! GTGGTGACAATTTTCAGTTT+TGG - chr6.1:78757997-78758016 MS.gene66373:CDS 35.0%
! GTTTTATATGCATTGCATGC+AGG - chr6.1:78755074-78755093 MS.gene66373:intron 35.0%
! TGCAATTCTTTTCCAGTTGT+TGG - chr6.1:78753097-78753116 MS.gene66373:CDS 35.0%
! TTTGCTATCCGAATGAACTT+GGG - chr6.1:78754840-78754859 MS.gene66373:intron 35.0%
!! GAAAGTACGAAGCATTGTTA+TGG + chr6.1:78757566-78757585 None:intergenic 35.0%
!! TCAATAAAGTTTGTTGGAGC+TGG + chr6.1:78755292-78755311 None:intergenic 35.0%
!! TCAGACATTGGTATTGACTA+AGG - chr6.1:78756938-78756957 MS.gene66373:CDS 35.0%
!!! ACTTTGTTTTACAAGAGCAG+TGG - chr6.1:78757672-78757691 MS.gene66373:intron 35.0%
!!! AGTTGGTGGTATTTTAACTG+TGG - chr6.1:78754496-78754515 MS.gene66373:CDS 35.0%
!!! CTTCATTTTGTTGCTTTGGT+AGG - chr6.1:78755472-78755491 MS.gene66373:CDS 35.0%
!!! GGTGTTTTTAGAAATGTAGC+GGG - chr6.1:78753699-78753718 MS.gene66373:intron 35.0%
!!! TGCTTTTTCGAAGCTATTTC+TGG - chr6.1:78756109-78756128 MS.gene66373:CDS 35.0%
!!! TTTTCGAAGCTATTTCTGGA+AGG - chr6.1:78756113-78756132 MS.gene66373:CDS 35.0%
ACCTTATTCCAACCAGCTAT+AGG - chr6.1:78754230-78754249 MS.gene66373:intron 40.0%
ACTGTGGAAACAGCTTTCTT+TGG - chr6.1:78758312-78758331 MS.gene66373:CDS 40.0%
AGAAATACTTGAGTCACTGC+TGG + chr6.1:78755548-78755567 None:intergenic 40.0%
AGGGACAGAAAGATATAACG+AGG - chr6.1:78753159-78753178 MS.gene66373:CDS 40.0%
AGTAGAAACTTGGCCTGTAA+CGG + chr6.1:78756634-78756653 None:intergenic 40.0%
AGTAGCAATTGGCATTTGTG+TGG - chr6.1:78758247-78758266 MS.gene66373:intron 40.0%
AGTTGCCGCAAAAACATTAG+AGG - chr6.1:78756881-78756900 MS.gene66373:CDS 40.0%
CAACCAAGTCAATGCAATAC+AGG - chr6.1:78757788-78757807 MS.gene66373:CDS 40.0%
CAACGGCCAACTATATAACA+AGG - chr6.1:78758156-78758175 MS.gene66373:intron 40.0%
CAATCTTCCATGTTTCAACC+AGG + chr6.1:78754201-78754220 None:intergenic 40.0%
CACCTGTCCATATAGTAATC+TGG + chr6.1:78754969-78754988 None:intergenic 40.0%
CACTGACAACAACTGTAAAC+AGG - chr6.1:78755164-78755183 MS.gene66373:intron 40.0%
CAGTGATACCGCATTTCTAT+CGG + chr6.1:78755149-78755168 None:intergenic 40.0%
CCACGACTTAGTTGCTATAA+TGG - chr6.1:78758218-78758237 MS.gene66373:intron 40.0%
CCATTATAGCAACTAAGTCG+TGG + chr6.1:78758221-78758240 None:intergenic 40.0%
CGCAAAAACATTAGAGGATC+CGG - chr6.1:78756887-78756906 MS.gene66373:CDS 40.0%
CTCCAGATTACTATATGGAC+AGG - chr6.1:78754964-78754983 MS.gene66373:intron 40.0%
CTGTCCATATAGTAATCTGG+AGG + chr6.1:78754966-78754985 None:intergenic 40.0%
GATTACTATATGGACAGGTG+TGG - chr6.1:78754969-78754988 MS.gene66373:intron 40.0%
GATTTGAAGATCGGTCAGTA+TGG + chr6.1:78758126-78758145 None:intergenic 40.0%
GCACTCTAGTGTTTCCTTTA+AGG + chr6.1:78756412-78756431 None:intergenic 40.0%
GCTATAGGACTTGCGAAAAA+TGG - chr6.1:78754245-78754264 MS.gene66373:intron 40.0%
GCTCAAACTTTGCACCTTAA+AGG - chr6.1:78756395-78756414 MS.gene66373:CDS 40.0%
GCTTTCTACAATGGAACCAT+TGG - chr6.1:78754446-78754465 MS.gene66373:intron 40.0%
GGGACAGAAAGATATAACGA+GGG - chr6.1:78753160-78753179 MS.gene66373:CDS 40.0%
GTTCCATTGTAGAAAGCTTG+TGG + chr6.1:78754443-78754462 None:intergenic 40.0%
TAAGAACTTAGCTTCGGGAT+CGG + chr6.1:78754129-78754148 None:intergenic 40.0%
TAAGTTCTTAGGTGCCTTGT+CGG - chr6.1:78754139-78754158 MS.gene66373:intron 40.0%
TACGCTTCCGAAAATAGTTG+TGG - chr6.1:78753678-78753697 MS.gene66373:intron 40.0%
TCCTATAGCTGGTTGGAATA+AGG + chr6.1:78754234-78754253 None:intergenic 40.0%
TCGAGCTTTCAGAAGAAAGT+AGG - chr6.1:78755770-78755789 MS.gene66373:intron 40.0%
TCTACCGACATTAAGACAGT+GGG + chr6.1:78753739-78753758 None:intergenic 40.0%
TGAAACATGGAAGATTGCCA+TGG - chr6.1:78754204-78754223 MS.gene66373:intron 40.0%
TGAACAGGTCCTAAACATCT+TGG - chr6.1:78754743-78754762 MS.gene66373:intron 40.0%
TGGAAACAGCTTTCTTTGGT+GGG - chr6.1:78758316-78758335 MS.gene66373:CDS 40.0%
TGTAGATGCCGATAGAAATG+CGG - chr6.1:78755138-78755157 MS.gene66373:intron 40.0%
TTATATGCATTGCATGCAGG+TGG - chr6.1:78755077-78755096 MS.gene66373:intron 40.0%
TTGCTATCCGAATGAACTTG+GGG - chr6.1:78754841-78754860 MS.gene66373:intron 40.0%
! ACCAGGCTTGATTTGAAGAT+CGG + chr6.1:78758135-78758154 None:intergenic 40.0%
! AGGCTTTTCCTGAAAGAAAG+AGG - chr6.1:78755790-78755809 MS.gene66373:intron 40.0%
! CAGTTGGTGTTTCAATGCTT+AGG - chr6.1:78753257-78753276 MS.gene66373:CDS 40.0%
! CTTGTTATATAGTTGGCCGT+TGG + chr6.1:78758158-78758177 None:intergenic 40.0%
! TTTTTCGCAAGTCCTATAGC+TGG + chr6.1:78754245-78754264 None:intergenic 40.0%
!! ATAAAGTTTGTTGGAGCTGG+AGG + chr6.1:78755289-78755308 None:intergenic 40.0%
!! ATAGACCCTTGGTCTTAGAA+CGG + chr6.1:78755606-78755625 None:intergenic 40.0%
!! ATCGATTTGCATGTAAAGCG+CGG - chr6.1:78755910-78755929 MS.gene66373:CDS 40.0%
!! CGGATCCTCTAATGTTTTTG+CGG + chr6.1:78756889-78756908 None:intergenic 40.0%
!! GTTGATGACCTCTTTCTTTC+AGG + chr6.1:78755801-78755820 None:intergenic 40.0%
!! GTTGTTTTCCAAGCTTCAAG+TGG - chr6.1:78753331-78753350 MS.gene66373:intron 40.0%
!! GTTTGCTATCCGAATGAACT+TGG - chr6.1:78754839-78754858 MS.gene66373:intron 40.0%
!! GTTTTTAGAAATGTAGCGGG+TGG - chr6.1:78753702-78753721 MS.gene66373:intron 40.0%
!! TATTTTCGGAAGCGTACTTC+CGG + chr6.1:78753674-78753693 None:intergenic 40.0%
!! TGTAAACAGGCATTTTGGAG+CGG - chr6.1:78755177-78755196 MS.gene66373:intron 40.0%
!!! AGGCTATGATGAGTTTTGGA+AGG + chr6.1:78757071-78757090 None:intergenic 40.0%
!!! TGGTGGTATTTTAACTGTGG+AGG - chr6.1:78754499-78754518 MS.gene66373:CDS 40.0%
AAAAGCTGCTGCAGCTTCTA+AGG - chr6.1:78756367-78756386 MS.gene66373:CDS 45.0%
AAATTTCCCTTTGCCGCATC+CGG + chr6.1:78754783-78754802 None:intergenic 45.0%
AACTTGATTGATCGTGACGG+TGG - chr6.1:78755742-78755761 MS.gene66373:intron 45.0%
AAGACCAAGGGTCTATACCA+AGG - chr6.1:78755610-78755629 MS.gene66373:CDS 45.0%
AAGCTTAGAGATATTGGCCG+AGG - chr6.1:78754412-78754431 MS.gene66373:intron 45.0%
AAGGTGACGATGATCAGAGA+CGG + chr6.1:78756566-78756585 None:intergenic 45.0%
ACAGGTGTGGTATACTCTGT+TGG - chr6.1:78754982-78755001 MS.gene66373:intron 45.0%
ACCGATCTTCAAATCAAGCC+TGG - chr6.1:78758131-78758150 MS.gene66373:intron 45.0%
AGAACCTTGGTATAGACCCT+TGG + chr6.1:78755617-78755636 None:intergenic 45.0%
AGCAGTAAGTGACCCAAGAA+AGG - chr6.1:78755942-78755961 MS.gene66373:CDS 45.0%
AGGAAAACTAGAACCATGGG+CGG + chr6.1:78756668-78756687 None:intergenic 45.0%
AGTGCACAAATATGGTGTGC+AGG - chr6.1:78752889-78752908 MS.gene66373:CDS 45.0%
ATAGGAGTCATGGAGGACAA+TGG + chr6.1:78755328-78755347 None:intergenic 45.0%
ATGATTAGGTGACTGACGCA+AGG + chr6.1:78757437-78757456 None:intergenic 45.0%
CAAACCTGTGAAGCAGCTAA+AGG + chr6.1:78753436-78753455 None:intergenic 45.0%
CAATGACCGGACAAATGTTC+CGG + chr6.1:78756068-78756087 None:intergenic 45.0%
CACAAATATGGTGTGCAGGA+TGG - chr6.1:78752893-78752912 MS.gene66373:CDS 45.0%
CAGACGATAGAATCCTCCAA+AGG - chr6.1:78756850-78756869 MS.gene66373:CDS 45.0%
CATCAACTGTGTGCATGTCA+AGG - chr6.1:78755814-78755833 MS.gene66373:intron 45.0%
CCAAGTAAGTTGCAAAGCGT+GGG + chr6.1:78753989-78754008 None:intergenic 45.0%
CGATGATCAGAGACGGAAAA+AGG + chr6.1:78756559-78756578 None:intergenic 45.0%
CGGCATCTACAACACATGTA+TGG + chr6.1:78755129-78755148 None:intergenic 45.0%
CTACCGACATTAAGACAGTG+GGG + chr6.1:78753738-78753757 None:intergenic 45.0%
CTCACCCTCCAATATCACTT+CGG - chr6.1:78753610-78753629 MS.gene66373:intron 45.0%
GATCCCGAAGCTAAGTTCTT+AGG - chr6.1:78754128-78754147 MS.gene66373:intron 45.0%
GATGCGGCAAAGGGAAATTT+AGG - chr6.1:78754783-78754802 MS.gene66373:intron 45.0%
GCACCTAAGAACTTAGCTTC+GGG + chr6.1:78754134-78754153 None:intergenic 45.0%
GCAGTAAGTGACCCAAGAAA+GGG - chr6.1:78755943-78755962 MS.gene66373:CDS 45.0%
GCATCCGAAGTGATATTGGA+GGG + chr6.1:78753617-78753636 None:intergenic 45.0%
GCTAGGTATTCTTCGAGTGT+AGG + chr6.1:78754284-78754303 None:intergenic 45.0%
GCTTTGGTAGGATGACCAAT+TGG - chr6.1:78755484-78755503 MS.gene66373:CDS 45.0%
GGCACCTAAGAACTTAGCTT+CGG + chr6.1:78754135-78754154 None:intergenic 45.0%
GGCATTTGTGTGGATGCAAA+TGG - chr6.1:78758257-78758276 MS.gene66373:intron 45.0%
GGCCAACTATATAACAAGGG+AGG - chr6.1:78758160-78758179 MS.gene66373:intron 45.0%
GGGAGATATATCAGTAGGTG+TGG + chr6.1:78755257-78755276 None:intergenic 45.0%
GGGATTCGTTCTACTTCAAC+TGG - chr6.1:78755199-78755218 MS.gene66373:intron 45.0%
GGTGTTTCAATGCTTAGGCT+TGG - chr6.1:78753262-78753281 MS.gene66373:CDS 45.0%
GGTTGGAATAAGGTCTTCCA+TGG + chr6.1:78754224-78754243 None:intergenic 45.0%
GTAAAGGATGTCGCAGAAGT+TGG - chr6.1:78754479-78754498 MS.gene66373:intron 45.0%
GTCTACCGACATTAAGACAG+TGG + chr6.1:78753740-78753759 None:intergenic 45.0%
GTGGAAACAGCTTTCTTTGG+TGG - chr6.1:78758315-78758334 MS.gene66373:CDS 45.0%
GTGTGCATCCGAAGTGATAT+TGG + chr6.1:78753621-78753640 None:intergenic 45.0%
GTTTCAATGCTTAGGCTTGG+TGG - chr6.1:78753265-78753284 MS.gene66373:intron 45.0%
TACCGACATTAAGACAGTGG+GGG + chr6.1:78753737-78753756 None:intergenic 45.0%
TACGCGTGGATCAATTACAG+TGG - chr6.1:78757978-78757997 MS.gene66373:CDS 45.0%
TAGAGATATTGGCCGAGGAA+GGG - chr6.1:78754417-78754436 MS.gene66373:intron 45.0%
TCAAATCAAGCCTGGTCCAA+CGG - chr6.1:78758139-78758158 MS.gene66373:intron 45.0%
TCACTTCGGATGCACACATT+TGG - chr6.1:78753624-78753643 MS.gene66373:intron 45.0%
TCCAAGTAAGTTGCAAAGCG+TGG + chr6.1:78753990-78754009 None:intergenic 45.0%
TCGGTCAGTATGGTGAAAAG+CGG + chr6.1:78758116-78758135 None:intergenic 45.0%
TGATTAGGTGACTGACGCAA+GGG + chr6.1:78757436-78757455 None:intergenic 45.0%
TGCATCCGAAGTGATATTGG+AGG + chr6.1:78753618-78753637 None:intergenic 45.0%
TGCTATCCGAATGAACTTGG+GGG - chr6.1:78754842-78754861 MS.gene66373:intron 45.0%
TGGAGCCAACTTAGAGATCA+TGG - chr6.1:78755097-78755116 MS.gene66373:intron 45.0%
TGGAGCTGGAGGTAGTTTAT+CGG + chr6.1:78755278-78755297 None:intergenic 45.0%
TGGTAGGATGACCAATTGGT+CGG - chr6.1:78755488-78755507 MS.gene66373:CDS 45.0%
TGTGTGGATGCAAATGGAGA+TGG - chr6.1:78758263-78758282 MS.gene66373:intron 45.0%
TTAGAGATATTGGCCGAGGA+AGG - chr6.1:78754416-78754435 MS.gene66373:intron 45.0%
TTCCAAGCTTCAAGTGGCAT+TGG - chr6.1:78753337-78753356 MS.gene66373:intron 45.0%
TTCCCCCACTGTCTTAATGT+CGG - chr6.1:78753732-78753751 MS.gene66373:intron 45.0%
TTCCTAGCAACTTTACCGGT+GGG - chr6.1:78757765-78757784 MS.gene66373:intron 45.0%
TTGTTGCAGCAGATGATGCT+CGG - chr6.1:78753227-78753246 MS.gene66373:CDS 45.0%
TTTCCTAGCAACTTTACCGG+TGG - chr6.1:78757764-78757783 MS.gene66373:intron 45.0%
! ATACTGGTTGTAGTCTGCGT+AGG + chr6.1:78758054-78758073 None:intergenic 45.0%
! CATTGGAGGCGGTTCTTTTA+TGG - chr6.1:78753354-78753373 MS.gene66373:intron 45.0%
! GAGGACAATGGCCTTTTGTT+TGG + chr6.1:78755316-78755335 None:intergenic 45.0%
! TCTTTTCCAGTTGTTGGGCT+AGG - chr6.1:78753103-78753122 MS.gene66373:CDS 45.0%
!! GTCCCTGTATTGCATTGACT+TGG + chr6.1:78757794-78757813 None:intergenic 45.0%
!!! GTAAACAGGCATTTTGGAGC+GGG - chr6.1:78755178-78755197 MS.gene66373:intron 45.0%
!!! TAAACAGGCATTTTGGAGCG+GGG - chr6.1:78755179-78755198 MS.gene66373:intron 45.0%
!! ATGAAAATAAAAATAAATTT+CGG - chr6.1:78756814-78756833 MS.gene66373:CDS 5.0%
AAGGATGTCGCAGAAGTTGG+TGG - chr6.1:78754482-78754501 MS.gene66373:intron 50.0%
ACATGCTGTTGATGCTGCAG+TGG - chr6.1:78753288-78753307 MS.gene66373:intron 50.0%
AGAGCGAGTGTTCCACTTGA+AGG + chr6.1:78754605-78754624 None:intergenic 50.0%
AGCAAGGTCTTAACTACGCG+TGG - chr6.1:78757964-78757983 MS.gene66373:CDS 50.0%
AGGATCCGGATCCTTGGTAT+TGG - chr6.1:78756901-78756920 MS.gene66373:CDS 50.0%
AGTGTTCCACTTGAAGGAGG+TGG + chr6.1:78754599-78754618 None:intergenic 50.0%
ATATAGTTGGCCGTTGGACC+AGG + chr6.1:78758152-78758171 None:intergenic 50.0%
ATCATCGTCACCTTGCTGCT+CGG - chr6.1:78756572-78756591 MS.gene66373:intron 50.0%
CAACTGCAGTCTACCTTTGG+AGG + chr6.1:78756866-78756885 None:intergenic 50.0%
CATGCAGCCTGGTTGAAACA+TGG - chr6.1:78754191-78754210 MS.gene66373:intron 50.0%
CATTAGAGGATCCGGATCCT+TGG - chr6.1:78756895-78756914 MS.gene66373:CDS 50.0%
CCCACGCTTTGCAACTTACT+TGG - chr6.1:78753986-78754005 MS.gene66373:intron 50.0%
CGAAGTGATATTGGAGGGTG+AGG + chr6.1:78753612-78753631 None:intergenic 50.0%
CGAGGGAAAAACAGCCAATC+AGG - chr6.1:78753177-78753196 MS.gene66373:CDS 50.0%
CGGTCAGTATGGTGAAAAGC+GGG + chr6.1:78758115-78758134 None:intergenic 50.0%
CTGTGAAGCAGCTAAAGGAG+CGG + chr6.1:78753431-78753450 None:intergenic 50.0%
CTTACTCCTAGCCCAACAAC+TGG + chr6.1:78753112-78753131 None:intergenic 50.0%
CTTGGACAGTTATGGACGTC+CGG - chr6.1:78754761-78754780 MS.gene66373:intron 50.0%
GACCAATTGGTCGGGGTAAT+TGG - chr6.1:78755497-78755516 MS.gene66373:CDS 50.0%
GCAATACAGGGACACAAGCA+GGG - chr6.1:78757801-78757820 MS.gene66373:CDS 50.0%
GGAGCTGGAGGTAGTTTATC+GGG + chr6.1:78755277-78755296 None:intergenic 50.0%
GGGCCACAAGCTTTCTACAA+TGG - chr6.1:78754437-78754456 MS.gene66373:intron 50.0%
GGTAGGATGACCAATTGGTC+GGG - chr6.1:78755489-78755508 MS.gene66373:CDS 50.0%
GGTCTTAGAACGGCGTCTAA+AGG + chr6.1:78755596-78755615 None:intergenic 50.0%
GGTGAGGAAAGTTCCACTAG+TGG + chr6.1:78753596-78753615 None:intergenic 50.0%
GTAAGTGACCCAAGAAAGGG+CGG - chr6.1:78755946-78755965 MS.gene66373:CDS 50.0%
GTAGGATGACCAATTGGTCG+GGG - chr6.1:78755490-78755509 MS.gene66373:CDS 50.0%
GTTTCAACCAGGCTGCATGA+AGG + chr6.1:78754190-78754209 None:intergenic 50.0%
TCGCAAGTCCTATAGCTGGT+TGG + chr6.1:78754241-78754260 None:intergenic 50.0%
TGCAATACAGGGACACAAGC+AGG - chr6.1:78757800-78757819 MS.gene66373:CDS 50.0%
TGGAACACTCGCTCTTTCTC+TGG - chr6.1:78754610-78754629 MS.gene66373:intron 50.0%
TTCTTAGGTGCCTTGTCGGT+GGG - chr6.1:78754143-78754162 MS.gene66373:intron 50.0%
! CAAGCTTCAAGTGGCATTGG+AGG - chr6.1:78753340-78753359 MS.gene66373:intron 50.0%
! CTCCAATGCCACTTGAAGCT+TGG + chr6.1:78753342-78753361 None:intergenic 50.0%
! GTTGTTGGGCTAGGAGTAAG+AGG - chr6.1:78753112-78753131 MS.gene66373:CDS 50.0%
!! AGACGCCGTTCTAAGACCAA+GGG - chr6.1:78755598-78755617 MS.gene66373:intron 50.0%
!! TAGACGCCGTTCTAAGACCA+AGG - chr6.1:78755597-78755616 MS.gene66373:intron 50.0%
ATGGAAGAGTGGACAGGGGT+TGG - chr6.1:78752912-78752931 MS.gene66373:CDS 55.0%
CAGGATGGAAGAGTGGACAG+GGG - chr6.1:78752908-78752927 MS.gene66373:CDS 55.0%
CAGTTATGGACGTCCGGATG+CGG - chr6.1:78754767-78754786 MS.gene66373:intron 55.0%
CATTGCTTTGCAGCCGTCAC+CGG - chr6.1:78756600-78756619 MS.gene66373:intron 55.0%
CGCCAATTACCCCGACCAAT+TGG + chr6.1:78755502-78755521 None:intergenic 55.0%
CGCTCCTTTAGCTGCTTCAC+AGG - chr6.1:78753429-78753448 MS.gene66373:CDS 55.0%
CGGCAACTGCAGTCTACCTT+TGG + chr6.1:78756869-78756888 None:intergenic 55.0%
CTAGTGTTTGCATCCGCCCA+TGG - chr6.1:78756652-78756671 MS.gene66373:CDS 55.0%
CTGGACAACCGCCCTTTCTT+GGG + chr6.1:78755957-78755976 None:intergenic 55.0%
GAAAGCTTGTGGCCCTTCCT+CGG + chr6.1:78754432-78754451 None:intergenic 55.0%
GCAGGATGGAAGAGTGGACA+GGG - chr6.1:78752907-78752926 MS.gene66373:CDS 55.0%
GCGAGTGTTCCACTTGAAGG+AGG + chr6.1:78754602-78754621 None:intergenic 55.0%
GGAATGCCACCTCCTTCAAG+TGG - chr6.1:78754590-78754609 MS.gene66373:CDS 55.0%
GGAGTTCCTGGTGAGTTAGC+TGG - chr6.1:78754164-78754183 MS.gene66373:intron 55.0%
GTGGCTGCTGCATTATGTGC+TGG - chr6.1:78753307-78753326 MS.gene66373:intron 55.0%
GTTCTTAGGTGCCTTGTCGG+TGG - chr6.1:78754142-78754161 MS.gene66373:intron 55.0%
TCATCGTCACCTTGCTGCTC+GGG - chr6.1:78756573-78756592 MS.gene66373:intron 55.0%
TGAAGGCCAGCTAACTCACC+AGG + chr6.1:78754173-78754192 None:intergenic 55.0%
TGACGGCTGCAAAGCAATGG+TGG + chr6.1:78756599-78756618 None:intergenic 55.0%
TGCAGGATGGAAGAGTGGAC+AGG - chr6.1:78752906-78752925 MS.gene66373:CDS 55.0%
TGCCCACCGGTAAAGTTGCT+AGG + chr6.1:78757770-78757789 None:intergenic 55.0%
TGGAAGAGTGGACAGGGGTT+GGG - chr6.1:78752913-78752932 MS.gene66373:CDS 55.0%
TGGTGTGCAGGATGGAAGAG+TGG - chr6.1:78752901-78752920 MS.gene66373:CDS 55.0%
! GCTTCAAGTGGCATTGGAGG+CGG - chr6.1:78753343-78753362 MS.gene66373:intron 55.0%
!! GATGCTCGGTGTTCTGCAGT+TGG - chr6.1:78753241-78753260 MS.gene66373:CDS 55.0%
!! GCATTGACTTGGTTGCCCAC+CGG + chr6.1:78757783-78757802 None:intergenic 55.0%
ACCAGGAACTCCCACCGACA+AGG + chr6.1:78754156-78754175 None:intergenic 60.0%
CGGGGTCCCCCAAGTTCATT+CGG + chr6.1:78754851-78754870 None:intergenic 60.0%
GCTGGACAACCGCCCTTTCT+TGG + chr6.1:78755958-78755977 None:intergenic 60.0%
GTCGGGGTAATTGGCGCAAG+CGG - chr6.1:78755506-78755525 MS.gene66373:intron 60.0%
! CGGTGACGGCTGCAAAGCAA+TGG + chr6.1:78756602-78756621 None:intergenic 60.0%
!! TAGCTGGCCTTCATGCAGCC+TGG - chr6.1:78754180-78754199 MS.gene66373:intron 60.0%
AACGGAGCGACCTCCGGTGA+CGG + chr6.1:78756616-78756635 None:intergenic 65.0%
ACCGGAGGTCGCTCCGTTAC+AGG - chr6.1:78756618-78756637 MS.gene66373:CDS 65.0%
CAATGGTGGCCCGAGCAGCA+AGG + chr6.1:78756585-78756604 None:intergenic 65.0%
GCCTTGTCGGTGGGAGTTCC+TGG - chr6.1:78754152-78754171 MS.gene66373:intron 65.0%
GGACGTCCGGATGCGGCAAA+GGG - chr6.1:78754774-78754793 MS.gene66373:intron 65.0%
GGGGTAATTGGCGCAAGCGG+TGG - chr6.1:78755509-78755528 MS.gene66373:intron 65.0%
TGCTTTGCAGCCGTCACCGG+AGG - chr6.1:78756603-78756622 MS.gene66373:CDS 65.0%
TGGACGTCCGGATGCGGCAA+AGG - chr6.1:78754773-78754792 MS.gene66373:intron 65.0%
! GCCTGTAACGGAGCGACCTC+CGG + chr6.1:78756622-78756641 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 78752884 78758349 78752884 ID=MS.gene66373
chr6.1 mRNA 78752884 78758349 78752884 ID=MS.gene66373.t1;Parent=MS.gene66373
chr6.1 exon 78758304 78758349 78758304 ID=MS.gene66373.t1.exon1;Parent=MS.gene66373.t1
chr6.1 CDS 78758304 78758349 78758304 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78757783 78758120 78757783 ID=MS.gene66373.t1.exon2;Parent=MS.gene66373.t1
chr6.1 CDS 78757783 78758120 78757783 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78756602 78757120 78756602 ID=MS.gene66373.t1.exon3;Parent=MS.gene66373.t1
chr6.1 CDS 78756602 78757120 78756602 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78756248 78756483 78756248 ID=MS.gene66373.t1.exon4;Parent=MS.gene66373.t1
chr6.1 CDS 78756248 78756483 78756248 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78755873 78756137 78755873 ID=MS.gene66373.t1.exon5;Parent=MS.gene66373.t1
chr6.1 CDS 78755873 78756137 78755873 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78755602 78755739 78755602 ID=MS.gene66373.t1.exon6;Parent=MS.gene66373.t1
chr6.1 CDS 78755602 78755739 78755602 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78755252 78755518 78755252 ID=MS.gene66373.t1.exon7;Parent=MS.gene66373.t1
chr6.1 CDS 78755252 78755518 78755252 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78754490 78754620 78754490 ID=MS.gene66373.t1.exon8;Parent=MS.gene66373.t1
chr6.1 CDS 78754490 78754620 78754490 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78753389 78753461 78753389 ID=MS.gene66373.t1.exon9;Parent=MS.gene66373.t1
chr6.1 CDS 78753389 78753461 78753389 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
chr6.1 exon 78752884 78753282 78752884 ID=MS.gene66373.t1.exon10;Parent=MS.gene66373.t1
chr6.1 CDS 78752884 78753282 78752884 ID=cds.MS.gene66373.t1;Parent=MS.gene66373.t1
Gene Sequence

>MS.gene66373

ATGTTAGTGCACAAATATGGTGTGCAGGATGGAAGAGTGGACAGGGGTTGGGAATGAGCTCATTGTCATTGAAGGACATACAAATTTAGAGAATGGGGTTGAAGGAATACCTGATAATTTTTTTCGAAGCTGAAAAGCGGCTGAAGAAAGATCAGTCTTTTCGTTGTTTGTTTCATTTATTTATTTACTTTTTCAACCTTATCTTATGCTAAATGCAATTCTTTTCCAGTTGTTGGGCTAGGAGTAAGAGGAAACACAAGTTTTTGGATATTGAAAGGGACAGAAAGATATAACGAGGGAAAAACAGCCAATCAGGCACATGTTATTGAATCGGAACTTGGAGTTGTTGCAGCAGATGATGCTCGGTGTTCTGCAGTTGGTGTTTCAATGCTTAGGCTTGGTGGACATGCTGTTGATGCTGCAGTGGCTGCTGCATTATGTGCTGGTGTTGTTTTCCAAGCTTCAAGTGGCATTGGAGGCGGTTCTTTTATGGTTGTGAAATCTTCTTCTAGCTCCAAAGCACAAGCTTATGATATGAGAGAAACCGCTCCTTTAGCTGCTTCACAGGTTTGAGATTAACTATTTCTGCTACACCATTTAAGAGGTTGAAACTCATGATTAAAAATTGTTGAATCGATTTCGCAAAATTAAGATACATTGTATGATTGCAGATTCTGTATATGTTTTTCCGAAAGAAATAAGAAACTCTCCACTAGTGGAACTTTCCTCACCCTCCAATATCACTTCGGATGCACACATTTGGTGAAAAACGTGAATTTTGTACTGTCCGGAAGTACGCTTCCGAAAATAGTTGTGGTGTTTTTAGAAATGTAGCGGGTGGAGAAAGTTTCCCCCACTGTCTTAATGTCGGTAGACTAAGTCATATCGACTATATCATATAAATCTTTGTTTCTTGTTTTTCCTTCTCTTCCCTTTGATCTTTTCTGTTGTTTATTCATCTATGTTTACAAATTCTTAATTCATGTTGTGGAAAATTTCTATGACACGAAATATGAAAAAATTTGAATTTAACATGACATTTTCTTGTTATGTTCTTTGAGATACTGCCATTAAAACTTCATTTCTGAAAAGAACGAAACATCCCACGCTTTGCAACTTACTTGGACATATTGAAAGCTAGCAGATAATATATCATTTTGATCATTTTCCTTTGCAGAAATCTACAAAAATGCAACTTACATTTGTGTAAATGTTTACTGTAAAAGCAGAATATGTATCAAACCGATCCCGAAGCTAAGTTCTTAGGTGCCTTGTCGGTGGGAGTTCCTGGTGAGTTAGCTGGCCTTCATGCAGCCTGGTTGAAACATGGAAGATTGCCATGGAAGACCTTATTCCAACCAGCTATAGGACTTGCGAAAAATGGTTTCACAGTGTCTCCTACACTCGAAGAATACCTAGCTAATGATGAAAAAAAGATAATGAGCGATCCTGGGTTAAGAAATATTTATGCACCTAATGGAACTTTGTTAAAAGGAGGGGAGATGTGTAGTAATATAGAACATGGGAAAAGCTTAGAGATATTGGCCGAGGAAGGGCCACAAGCTTTCTACAATGGAACCATTGGTGAGAAGTTAGTAAAGGATGTCGCAGAAGTTGGTGGTATTTTAACTGTGGAGGATTTACGAAATTACAAGGTGGAAATTACTGATGCAATGACTGTCAATGTAATGGGATATACTATACATGGAATGCCACCTCCTTCAAGTGGAACACTCGCTCTTTCTCTGGTTTGTACATTGATATCCCTTCTGTACTCGATGATATTTCCATGTTGTTACGTAGAAACATGACCTTATCCTATATTTGTATGCTTGTATTGTATATTCTAATGGTTAGTATGAACAGGTCCTAAACATCTTGGACAGTTATGGACGTCCGGATGCGGCAAAGGGAAATTTAGGTATTCATAGACTAATAGAAGCTTTGAAACACACGTTTGCTATCCGAATGAACTTGGGGGACCCCGACTTTGAAAATATTAGTGCAACTTCATCCGAAATGCTTTCCAAATCTTTTGCACAAACTATTCAGCGCCAAATACTCGATAACACGACATTCCCTCCAGATTACTATATGGACAGGTGTGGTATACTCTGTTGGTTGAAGTAATTTAAATTTCAATGAAAACTATACGTTTTGCTTGATATGTTGCAAACTAACTAAGTTGTTGTTTTATATGCATTGCATGCAGGTGGAGCCAACTTAGAGATCATGGAACAAGCCATACATGTGTTGTAGATGCCGATAGAAATGCGGTATCACTGACAACAACTGTAAACAGGCATTTTGGAGCGGGGATTCGTTCTACTTCAACTGGTATTGTCGTCAATGATGAAATGGATGACTTCTCCACACCTACTGATATATCTCCCGATAAACTACCTCCAGCTCCAACAAACTTTATTGAACCAAACAAAAGGCCATTGTCCTCCATGACTCCTATTATCATTACAAAGGTATTGTTTGCAGCATCTTTACTTGATGTGATATAGACATAAGCACACAATTTTCGCATGATAAAGTCGTGAAAAATTTATTACAAGATTATCTATGGTTGGATTCATACACTTCATTTTGTTGCTTTGGTAGGATGACCAATTGGTCGGGGTAATTGGCGCAAGCGGTGGAATGAGTATTATTCCAGCAGTGACTCAAGTATTTCTTAATCATTTCATCTTAGGAATGAAACCTTTAGACGCCGTTCTAAGACCAAGGGTCTATACCAAGGTTCTAACTCCTTTGTATTGAAATAGTTTCTTTATGTATGATGCTCCTAACTACAATCTAATTGTGATCTCTATCTTATGTAGCTATTACCGGATACAGTTTCCTATGAAAACTTGATTGATCGTGACGGTGGTCACATCGAGCTTTCAGAAGAAAGTAGGCTTTTCCTGAAAGAAAGAGGTCATCAACTGTGTGCATGTCAAGGACAATCTATTACTCAACTTATTGTTCATACTCCCAAAACACCTTTGAACATTAATAGGAAAATTGGTGAAAACATCGATTTGCATGTAAAGCGCGGCACTCTAACAGCAGTAAGTGACCCAAGAAAGGGCGGTTGTCCAGCTGCAGTATAAATAAATCAATTCATCTATTGTTTAAATCGATCAATTCATATTGATCAAAAATGTCAATATATAAATTCATTATTTAACCGGAACATTTGTCCGGTCATTGTTACAATCTATTCATGTATAGTGCTTTTTCGAAGCTATTTCTGGAAGGATGAATAAAGTGTTTGGATTAGTTCTTTTGAGTGCACTTTGTAAATTATTTAATACTTGAGTATTCATATTAAGTTTCTTTTGTAACATTTGAGTTTTAAATTTAAAAAAAATTGCAACTTTTATTGGTTCATGCTAAAGAAAACAAAATCAATAAAGAATTTTTATTTGATTAAATGTGCCAAAGTAAAAGACAAATTACATGGATTTAGTCAAGAATCTAATTTCAATCAAAAGCTGCTGCAGCTTCTAAGGTTCATGCTCAAACTTTGCACCTTAAAGGAAACACTAGAGTGCATTTCACTCGTTTTTCACCGTCTGATGATTAAGATCACTAAGATAACGCCATTTAGCCAAAAAATTTACAAAGAAAACTAAAACATAAAATGGTCGAAAACACATCAACCATAAATACTCTAATCCTTTTTCCGTCTCTGATCATCGTCACCTTGCTGCTCGGGCCACCATTGCTTTGCAGCCGTCACCGGAGGTCGCTCCGTTACAGGCCAAGTTTCTACTAGTGTTTGCATCCGCCCATGGTTCTAGTTTTCCTAACTTAGCATTTGCATCAACACAACCTGTTTTCATACTTCACATCATAAAGCACATGTAATGGTTTTCATGCTTCCTTGACTTTTTATTGTCAATATCTTATTAATTCTCCCATGCTTCTTATATAATGAAAATAAAAATAAATTTCGGGCATTAGATTTCTCAGACGATAGAATCCTCCAAAGGTAGACTGCAGTTGCCGCAAAAACATTAGAGGATCCGGATCCTTGGTATTGGTTAAAGACAATCTTTCAGACATTGGTATTGACTAAGGTTCATACGATGATAATCAACATAACTGGAAAAAATTCCATCCAATTTGGATTGTCAATCGAACTCGAAAAAAAAAACCAGAATGACATTAATCACTACATGTGAAAACCTTCCAAAACTCATCATAGCCTAAGTCACAAATAATAGGCTGCCAAAAGACTACCAATTTATATGATATGCTGAACAACTATTTTCCTTCTATCTGACATGAATATTATATCTTGATCATTAGATTAATGTGACAGTGAAAAATTGGCAGCAAATGAAGTATACCAACACAATTAATGTAAAAGGTAGAAAATATATTCATTAGCATTTATCAAAAAAACATTACATATTATGTAATATCCAACAATGAAGAATTTGGTCCATGTCCATTTTGATAAAAGCTTGTGTGATTCTCACTTCTTGTTCATGTCCATTTGCCTAAGCTATTTTTTTTATCAGGAACTAGAAGTGGAATTGAAAACACACCCTTGCGTCAGTCACCTAATCATCACCTAATCAAAGTAAATGCAAATAGTTCATGCAAAAAACAAACTAATCATCACCTAATCAAAGTAAATGCAAATAGTGCATGCAAGAAACAAACTAGCATAAATACCATAACAATGCTTCGTACTTTCTTCATTCACCATTACGACGATGAATACGATTTATTTTTTCATATGCTTATGTTTACTCATACCTTTTACAATAGGACAGTATGAGTACTTTGTTTTACAAGAGCAGTGGCCATTAGAATATTGCATGAATAACTATTGTACCAAACCTCCAGAATATAGCTTTATAATCGATGGATTGTTTCCTAGCAACTTTACCGGTGGGCAACCAAGTCAATGCAATACAGGGACACAAGCAGGGCAATCACTGTCACCACAAGATGTAAGTAACTTGATCTCTATAAAATTGATTTTTATAAATTTGCTTTATAATTTTTTTGCTTTAGTCATCTAAATTTTTTATAACTTGATTTCTTGATATTTTATAGGTTTCTTCGATAAAGCAAGGTCTTAACTACGCGTGGATCAATTACAGTGGTGACAATTTTCAGTTTTGGTCTAAACAATGGGATACTCATGGCACTTGTTCCTACGCAGACTACAACCAGTATCAATTTTTTGATTTGGCGTTGACGATTTACTTTCGACACCCGCTTTTCACCATACTGACCGATCTTCAAATCAAGCCTGGTCCAACGGCCAACTATATAACAAGGGAGGTTGCGAATCTACTAAAAAGGGTAACTGGTTTTTACCCACGACTTAGTTGCTATAATGGCAGATTAGTAGCAATTGGCATTTGTGTGGATGCAAATGGAGATGGAATAGATTGTAATCCCTTCAATAATAACTGTGGAAACAGCTTTCTTTGGTGGGCGCCGCCTTAA
Protein sequence

>MS.gene66373.t1

MLVHKYGVQDGRVDRVVGLGVRGNTSFWILKGTERYNEGKTANQAHVIESELGVVAADDARCSAVGVSMLRLGGHAVDAAVAAALCAGVVFQASSGIGGGSFMVVKSSSSSKAQAYDMRETAPLAASQNMYQTDPEAKFLGALSVGVPGELAGLHAAWLKHGRLPWKTLFQPAIGLAKNGFTVSPTLEEYLANDEKKIMSDPGLRNIYAPNGTLLKGGEMCSNIEHGKSLEILAEEGPQAFYNGTIGEKLVKDVAEVGGILTVEDLRNYKVEITDAMTVNVMGYTIHGMPPPSSGTLALSLVLNILDSYGRPDAAKGNLGIHRLIEALKHTFAIRMNLGDPDFENISATSSEMLSKSFAQTIQRQILDNTTFPPDYYMDRWSQLRDHGTSHTCVVDADRNAVSLTTTVNRHFGAGIRSTSTGIVVNDEMDDFSTPTDISPDKLPPAPTNFIEPNKRPLSSMTPIIITKDDQLVGVIGASGGMSIIPAVTQVFLNHFILGMKPLDAVLRPRVYTKLLPDTVSYENLIDRDGGHIELSEESRLFLKERGHQLCACQGQSITQLIVHTPKTPLNINRKIGENIDLHVKRGTLTAVSDPRKGGCPAAPSPEVAPLQAKFLLVFASAHGSSFPNLAFASTQPVFILHIIKHINFTGGQPSQCNTGTQAGQSLSPQDVSSIKQGLNYAWINYSGDNFQFWSKQWDTHGTCSYADYNQYQFFDLALTIYFRHPLFTILTDLQIKPGPTANYITREVANLLKRVTGFYPRLSCYNGRLVAIGICVDANGDGIDCNPFNNNCGNSFLWWAPP