Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66637.t1 | XP_003605992.2 | 99.3 | 993 | 7 | 0 | 1 | 993 | 1 | 993 | 0.00E+00 | 1850.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66637.t1 | Q9SHS7 | 90.8 | 937 | 80 | 4 | 61 | 993 | 66 | 1000 | 0.0e+00 | 1637.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66637.t1 | G7JET4 | 99.3 | 993 | 7 | 0 | 1 | 993 | 1 | 993 | 0.0e+00 | 1850.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene66637 | 0.825197 | 5.34E-54 | -1.69E-46 |
| MS.gene050085 | MS.gene66637 | 0.827277 | 1.71E-54 | -1.69E-46 |
| MS.gene050116 | MS.gene66637 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene66637 | 0.842142 | 3.10E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene66637 | 0.808791 | 2.60E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene66637 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene66637 | 0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene051809 | MS.gene66637 | 0.83199 | 1.22E-55 | -1.69E-46 |
| MS.gene052242 | MS.gene66637 | -0.810234 | 1.28E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene66637 | 0.809868 | 1.53E-50 | -1.69E-46 |
| MS.gene056097 | MS.gene66637 | 0.877142 | 7.96E-69 | -1.69E-46 |
| MS.gene056181 | MS.gene66637 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene66637 | 0.809515 | 1.82E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene66637 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene058638 | MS.gene66637 | 0.806887 | 6.61E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene66637 | 0.89575 | 7.12E-76 | -1.69E-46 |
| MS.gene060563 | MS.gene66637 | 0.839103 | 1.94E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008343 | MS.gene66637 | PPI |
| MS.gene20678 | MS.gene66637 | PPI |
| MS.gene049695 | MS.gene66637 | PPI |
| MS.gene66637 | MS.gene05020 | PPI |
| MS.gene07158 | MS.gene66637 | PPI |
| MS.gene66637 | MS.gene061570 | PPI |
| MS.gene66637 | MS.gene005654 | PPI |
| MS.gene03005 | MS.gene66637 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66637.t1 | MTR_4g050540 | 99.396 | 993 | 6 | 0 | 1 | 993 | 1 | 993 | 0.0 | 2013 |
| MS.gene66637.t1 | MTR_2g087530 | 90.020 | 1002 | 78 | 6 | 1 | 993 | 1 | 989 | 0.0 | 1696 |
| MS.gene66637.t1 | MTR_2g087530 | 93.567 | 855 | 49 | 5 | 142 | 993 | 25 | 876 | 0.0 | 1513 |
| MS.gene66637.t1 | MTR_1g089370 | 76.259 | 417 | 97 | 2 | 578 | 993 | 458 | 873 | 0.0 | 652 |
| MS.gene66637.t1 | MTR_1g079950 | 47.078 | 308 | 146 | 7 | 644 | 951 | 4 | 294 | 2.28e-83 | 273 |
| MS.gene66637.t1 | MTR_1g079950 | 47.078 | 308 | 146 | 7 | 644 | 951 | 4 | 294 | 2.59e-83 | 273 |
| MS.gene66637.t1 | MTR_7g116380 | 46.753 | 308 | 147 | 7 | 644 | 951 | 4 | 294 | 5.62e-83 | 271 |
| MS.gene66637.t1 | MTR_7g116380 | 46.753 | 308 | 147 | 7 | 644 | 951 | 4 | 294 | 6.38e-83 | 271 |
| MS.gene66637.t1 | MTR_5g081230 | 46.104 | 308 | 150 | 6 | 644 | 951 | 20 | 311 | 6.57e-83 | 271 |
| MS.gene66637.t1 | MTR_1g074880 | 47.541 | 305 | 141 | 8 | 649 | 952 | 9 | 295 | 2.59e-82 | 270 |
| MS.gene66637.t1 | MTR_1g074880 | 47.541 | 305 | 141 | 8 | 649 | 952 | 9 | 295 | 3.13e-82 | 270 |
| MS.gene66637.t1 | MTR_1g079950 | 47.249 | 309 | 144 | 8 | 644 | 951 | 4 | 294 | 6.41e-82 | 269 |
| MS.gene66637.t1 | MTR_1g079950 | 47.078 | 308 | 146 | 7 | 644 | 951 | 33 | 323 | 1.32e-81 | 269 |
| MS.gene66637.t1 | MTR_8g098980 | 50.000 | 272 | 122 | 5 | 665 | 936 | 23 | 280 | 1.93e-81 | 267 |
| MS.gene66637.t1 | MTR_7g112870 | 44.214 | 337 | 158 | 7 | 644 | 980 | 8 | 314 | 2.95e-81 | 266 |
| MS.gene66637.t1 | MTR_1g043240 | 46.557 | 305 | 144 | 8 | 649 | 952 | 9 | 295 | 1.29e-79 | 262 |
| MS.gene66637.t1 | MTR_8g005010 | 46.619 | 281 | 136 | 5 | 672 | 952 | 27 | 293 | 3.52e-79 | 260 |
| MS.gene66637.t1 | MTR_1g074880 | 49.206 | 252 | 112 | 6 | 702 | 952 | 4 | 240 | 3.53e-72 | 240 |
| MS.gene66637.t1 | MTR_1g074880 | 49.206 | 252 | 112 | 6 | 702 | 952 | 4 | 240 | 4.28e-72 | 240 |
| MS.gene66637.t1 | MTR_1g079950 | 48.996 | 249 | 113 | 5 | 703 | 951 | 34 | 268 | 4.79e-71 | 239 |
| MS.gene66637.t1 | MTR_8g062430 | 39.792 | 289 | 160 | 5 | 673 | 961 | 24 | 298 | 3.58e-60 | 208 |
| MS.gene66637.t1 | MTR_5g037200 | 39.792 | 289 | 160 | 5 | 673 | 961 | 24 | 298 | 2.10e-59 | 206 |
| MS.gene66637.t1 | MTR_7g107310 | 41.509 | 265 | 141 | 5 | 672 | 936 | 30 | 280 | 6.30e-59 | 205 |
| MS.gene66637.t1 | MTR_8g085610 | 40.909 | 264 | 142 | 5 | 673 | 936 | 26 | 275 | 2.02e-58 | 203 |
| MS.gene66637.t1 | MTR_5g093990 | 41.697 | 271 | 145 | 5 | 672 | 942 | 20 | 277 | 1.75e-57 | 201 |
| MS.gene66637.t1 | MTR_8g085610 | 40.530 | 264 | 143 | 5 | 673 | 936 | 2 | 251 | 1.07e-56 | 197 |
| MS.gene66637.t1 | MTR_1g039380 | 35.439 | 285 | 169 | 6 | 659 | 942 | 6 | 276 | 5.14e-52 | 185 |
| MS.gene66637.t1 | MTR_1g039380 | 36.260 | 262 | 152 | 6 | 682 | 942 | 5 | 252 | 6.16e-50 | 178 |
| MS.gene66637.t1 | MTR_2g100130 | 34.643 | 280 | 163 | 7 | 663 | 936 | 100 | 365 | 2.26e-43 | 163 |
| MS.gene66637.t1 | MTR_2g100130 | 34.643 | 280 | 163 | 7 | 663 | 936 | 199 | 464 | 8.80e-43 | 164 |
| MS.gene66637.t1 | MTR_2g100130 | 34.643 | 280 | 163 | 7 | 663 | 936 | 209 | 474 | 9.61e-43 | 164 |
| MS.gene66637.t1 | MTR_2g100130 | 34.767 | 279 | 162 | 7 | 664 | 936 | 210 | 474 | 2.73e-42 | 163 |
| MS.gene66637.t1 | MTR_2g100130 | 34.643 | 280 | 163 | 7 | 663 | 936 | 170 | 435 | 5.01e-42 | 161 |
| MS.gene66637.t1 | MTR_2g100130 | 34.386 | 285 | 167 | 7 | 664 | 942 | 210 | 480 | 1.67e-41 | 160 |
| MS.gene66637.t1 | MTR_2g100130 | 34.815 | 270 | 156 | 7 | 663 | 926 | 209 | 464 | 1.32e-40 | 157 |
| MS.gene66637.t1 | MTR_2g100130 | 34.386 | 285 | 167 | 7 | 664 | 942 | 171 | 441 | 1.47e-40 | 157 |
| MS.gene66637.t1 | MTR_5g037200 | 42.262 | 168 | 88 | 2 | 673 | 840 | 24 | 182 | 2.03e-40 | 149 |
| MS.gene66637.t1 | MTR_3g452710 | 37.500 | 256 | 135 | 8 | 689 | 936 | 208 | 446 | 9.43e-40 | 154 |
| MS.gene66637.t1 | MTR_3g452710 | 36.226 | 265 | 144 | 8 | 680 | 936 | 266 | 513 | 2.20e-39 | 155 |
| MS.gene66637.t1 | MTR_2g100160 | 36.502 | 263 | 143 | 7 | 682 | 936 | 138 | 384 | 2.60e-38 | 149 |
| MS.gene66637.t1 | MTR_8g072600 | 32.288 | 319 | 145 | 11 | 681 | 938 | 105 | 413 | 2.02e-34 | 138 |
| MS.gene66637.t1 | MTR_8g072600 | 31.250 | 256 | 126 | 8 | 681 | 896 | 105 | 350 | 6.35e-27 | 114 |
| MS.gene66637.t1 | MTR_2g099710 | 29.524 | 315 | 136 | 13 | 674 | 938 | 211 | 489 | 2.78e-21 | 99.8 |
| MS.gene66637.t1 | MTR_4g109680 | 24.355 | 349 | 210 | 12 | 84 | 421 | 20 | 325 | 2.46e-18 | 90.5 |
| MS.gene66637.t1 | MTR_2g036510 | 30.000 | 270 | 176 | 7 | 159 | 425 | 283 | 542 | 5.43e-15 | 79.7 |
| MS.gene66637.t1 | MTR_2g036510 | 26.490 | 302 | 168 | 12 | 86 | 368 | 345 | 611 | 3.50e-14 | 77.4 |
| MS.gene66637.t1 | MTR_1g084120 | 27.106 | 273 | 185 | 9 | 147 | 417 | 53 | 313 | 7.04e-15 | 79.7 |
| MS.gene66637.t1 | MTR_1g084120 | 25.962 | 312 | 193 | 8 | 159 | 460 | 15 | 298 | 1.93e-14 | 78.2 |
| MS.gene66637.t1 | MTR_1g084120 | 28.636 | 220 | 119 | 9 | 86 | 304 | 125 | 307 | 3.33e-11 | 67.8 |
| MS.gene66637.t1 | MTR_8g105590 | 28.638 | 213 | 147 | 4 | 159 | 369 | 303 | 512 | 2.04e-13 | 74.7 |
| MS.gene66637.t1 | MTR_1g090740 | 27.228 | 202 | 130 | 4 | 124 | 312 | 79 | 276 | 5.37e-13 | 73.2 |
| MS.gene66637.t1 | MTR_4g007980 | 29.646 | 226 | 120 | 8 | 86 | 300 | 172 | 369 | 6.14e-13 | 72.8 |
| MS.gene66637.t1 | MTR_7g113200 | 31.757 | 148 | 91 | 3 | 136 | 277 | 251 | 394 | 8.45e-13 | 72.8 |
| MS.gene66637.t1 | MTR_7g113200 | 29.240 | 171 | 111 | 3 | 136 | 300 | 251 | 417 | 1.21e-12 | 72.0 |
| MS.gene66637.t1 | MTR_1g492850 | 26.897 | 290 | 176 | 9 | 147 | 423 | 46 | 312 | 6.62e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66637.t1 | AT1G08420 | 86.948 | 1019 | 99 | 9 | 1 | 993 | 1 | 1011 | 0.0 | 1723 |
| MS.gene66637.t1 | AT2G27210 | 87.924 | 1002 | 110 | 5 | 1 | 993 | 1 | 1000 | 0.0 | 1712 |
| MS.gene66637.t1 | AT1G08420 | 86.457 | 1019 | 99 | 10 | 1 | 993 | 1 | 1006 | 0.0 | 1709 |
| MS.gene66637.t1 | AT2G27210 | 87.425 | 1002 | 110 | 6 | 1 | 993 | 1 | 995 | 0.0 | 1696 |
| MS.gene66637.t1 | AT4G03080 | 61.422 | 928 | 293 | 11 | 69 | 993 | 10 | 875 | 0.0 | 1080 |
| MS.gene66637.t1 | AT1G03445 | 37.324 | 852 | 411 | 19 | 169 | 986 | 28 | 790 | 1.38e-158 | 487 |
| MS.gene66637.t1 | AT1G03445 | 45.902 | 366 | 171 | 8 | 69 | 434 | 11 | 349 | 7.39e-92 | 310 |
| MS.gene66637.t1 | AT1G03445 | 36.874 | 838 | 406 | 19 | 169 | 972 | 28 | 776 | 3.12e-151 | 468 |
| MS.gene66637.t1 | AT1G03445 | 45.902 | 366 | 171 | 8 | 69 | 434 | 11 | 349 | 6.51e-92 | 310 |
| MS.gene66637.t1 | AT5G59160 | 48.515 | 303 | 141 | 6 | 649 | 951 | 17 | 304 | 1.48e-85 | 278 |
| MS.gene66637.t1 | AT5G59160 | 48.515 | 303 | 141 | 6 | 649 | 951 | 17 | 304 | 1.48e-85 | 278 |
| MS.gene66637.t1 | AT5G59160 | 48.515 | 303 | 141 | 6 | 649 | 951 | 17 | 304 | 1.48e-85 | 278 |
| MS.gene66637.t1 | AT2G39840 | 46.926 | 309 | 148 | 6 | 643 | 951 | 16 | 308 | 8.90e-85 | 276 |
| MS.gene66637.t1 | AT5G27840 | 47.003 | 317 | 149 | 6 | 649 | 965 | 17 | 314 | 2.42e-84 | 275 |
| MS.gene66637.t1 | AT5G27840 | 47.003 | 317 | 149 | 6 | 649 | 965 | 17 | 314 | 2.42e-84 | 275 |
| MS.gene66637.t1 | AT5G27840 | 47.896 | 309 | 142 | 6 | 649 | 957 | 17 | 306 | 2.46e-84 | 275 |
| MS.gene66637.t1 | AT5G27840 | 47.896 | 309 | 142 | 6 | 649 | 957 | 17 | 306 | 3.60e-84 | 275 |
| MS.gene66637.t1 | AT2G29400 | 45.779 | 308 | 152 | 5 | 644 | 951 | 18 | 310 | 9.21e-83 | 271 |
| MS.gene66637.t1 | AT1G64040 | 48.639 | 294 | 135 | 6 | 643 | 936 | 3 | 280 | 3.92e-82 | 269 |
| MS.gene66637.t1 | AT3G46820 | 45.806 | 310 | 151 | 7 | 644 | 952 | 12 | 305 | 1.79e-81 | 267 |
| MS.gene66637.t1 | AT3G05580 | 45.912 | 318 | 150 | 7 | 649 | 966 | 17 | 312 | 5.78e-81 | 266 |
| MS.gene66637.t1 | AT4G11240 | 50.000 | 264 | 118 | 5 | 673 | 936 | 31 | 280 | 2.42e-77 | 256 |
| MS.gene66637.t1 | AT5G43380 | 47.619 | 294 | 137 | 7 | 649 | 942 | 9 | 285 | 1.08e-76 | 254 |
| MS.gene66637.t1 | AT5G43380 | 47.619 | 294 | 137 | 7 | 649 | 942 | 9 | 285 | 1.23e-76 | 254 |
| MS.gene66637.t1 | AT5G43380 | 47.292 | 277 | 132 | 5 | 673 | 949 | 30 | 292 | 5.58e-75 | 250 |
| MS.gene66637.t1 | AT3G05580 | 47.638 | 254 | 114 | 6 | 649 | 902 | 17 | 251 | 1.89e-65 | 221 |
| MS.gene66637.t1 | AT1G69960 | 40.690 | 290 | 156 | 6 | 673 | 961 | 25 | 299 | 1.32e-60 | 209 |
| MS.gene66637.t1 | AT1G10430 | 39.792 | 289 | 160 | 5 | 673 | 961 | 24 | 298 | 2.02e-60 | 209 |
| MS.gene66637.t1 | AT1G10430 | 39.792 | 289 | 160 | 5 | 673 | 961 | 24 | 298 | 2.02e-60 | 209 |
| MS.gene66637.t1 | AT1G59830 | 39.446 | 289 | 161 | 5 | 673 | 961 | 24 | 298 | 3.98e-60 | 208 |
| MS.gene66637.t1 | AT4G26720 | 40.221 | 271 | 149 | 5 | 672 | 942 | 20 | 277 | 5.28e-59 | 205 |
| MS.gene66637.t1 | AT5G55260 | 41.697 | 271 | 145 | 5 | 672 | 942 | 20 | 277 | 8.89e-59 | 204 |
| MS.gene66637.t1 | AT3G58500 | 41.288 | 264 | 141 | 5 | 673 | 936 | 31 | 280 | 5.15e-58 | 202 |
| MS.gene66637.t1 | AT2G42500 | 40.909 | 264 | 142 | 5 | 673 | 936 | 31 | 280 | 2.10e-57 | 201 |
| MS.gene66637.t1 | AT1G59830 | 41.525 | 236 | 124 | 5 | 673 | 908 | 24 | 245 | 9.12e-53 | 186 |
| MS.gene66637.t1 | AT3G19980 | 35.842 | 279 | 164 | 6 | 659 | 936 | 6 | 270 | 1.17e-51 | 184 |
| MS.gene66637.t1 | AT1G50370 | 35.484 | 279 | 165 | 6 | 659 | 936 | 6 | 270 | 2.22e-51 | 183 |
| MS.gene66637.t1 | AT5G55260 | 36.218 | 312 | 145 | 6 | 672 | 942 | 20 | 318 | 6.86e-51 | 183 |
| MS.gene66637.t1 | AT2G42500 | 41.102 | 236 | 122 | 6 | 703 | 936 | 13 | 233 | 5.98e-48 | 172 |
| MS.gene66637.t1 | AT2G42810 | 37.023 | 262 | 140 | 8 | 683 | 936 | 204 | 448 | 1.29e-40 | 157 |
| MS.gene66637.t1 | AT2G42810 | 37.023 | 262 | 140 | 8 | 683 | 936 | 204 | 448 | 1.29e-40 | 157 |
| MS.gene66637.t1 | AT2G42810 | 37.023 | 262 | 140 | 8 | 683 | 936 | 204 | 448 | 1.29e-40 | 157 |
| MS.gene66637.t1 | AT2G42810 | 37.023 | 262 | 140 | 8 | 683 | 936 | 258 | 502 | 1.90e-40 | 158 |
| MS.gene66637.t1 | AT2G42810 | 37.023 | 262 | 140 | 8 | 683 | 936 | 257 | 501 | 2.18e-40 | 157 |
| MS.gene66637.t1 | AT2G42500 | 35.979 | 189 | 98 | 5 | 640 | 821 | 1 | 173 | 6.90e-32 | 123 |
| MS.gene66637.t1 | AT2G42500 | 37.017 | 181 | 91 | 5 | 640 | 813 | 1 | 165 | 4.87e-31 | 120 |
| MS.gene66637.t1 | AT2G42500 | 37.017 | 181 | 91 | 5 | 640 | 813 | 1 | 165 | 5.95e-31 | 120 |
| MS.gene66637.t1 | AT5G63870 | 28.955 | 335 | 171 | 11 | 661 | 938 | 37 | 361 | 1.87e-30 | 125 |
| MS.gene66637.t1 | AT5G63870 | 28.955 | 335 | 171 | 11 | 661 | 938 | 37 | 361 | 1.87e-30 | 125 |
| MS.gene66637.t1 | AT1G48120 | 28.824 | 340 | 170 | 12 | 661 | 938 | 615 | 944 | 5.07e-26 | 116 |
| MS.gene66637.t1 | AT5G63870 | 29.044 | 272 | 147 | 8 | 661 | 896 | 37 | 298 | 1.48e-25 | 108 |
| MS.gene66637.t1 | AT5G10900 | 27.151 | 372 | 214 | 14 | 636 | 968 | 159 | 512 | 2.17e-22 | 103 |
| MS.gene66637.t1 | AT5G10900 | 28.070 | 342 | 194 | 13 | 636 | 938 | 159 | 487 | 2.89e-22 | 103 |
| MS.gene66637.t1 | AT5G10900 | 28.070 | 342 | 194 | 13 | 636 | 938 | 159 | 487 | 3.38e-22 | 102 |
| MS.gene66637.t1 | AT1G74150 | 27.378 | 347 | 198 | 13 | 85 | 420 | 18 | 321 | 1.58e-18 | 90.9 |
| MS.gene66637.t1 | AT1G74150 | 25.527 | 427 | 259 | 16 | 85 | 498 | 18 | 398 | 1.84e-18 | 90.9 |
| MS.gene66637.t1 | AT1G74150 | 25.527 | 427 | 259 | 16 | 85 | 498 | 18 | 398 | 2.09e-18 | 90.5 |
| MS.gene66637.t1 | AT1G18610 | 27.007 | 274 | 164 | 9 | 169 | 434 | 22 | 267 | 5.69e-16 | 82.8 |
| MS.gene66637.t1 | AT1G18610 | 24.432 | 352 | 216 | 11 | 79 | 421 | 15 | 325 | 5.18e-15 | 79.7 |
| MS.gene66637.t1 | AT1G18610 | 27.007 | 274 | 164 | 9 | 169 | 434 | 22 | 267 | 5.69e-16 | 82.8 |
| MS.gene66637.t1 | AT1G18610 | 24.432 | 352 | 216 | 11 | 79 | 421 | 15 | 325 | 5.18e-15 | 79.7 |
| MS.gene66637.t1 | AT1G74150 | 25.562 | 356 | 236 | 14 | 156 | 498 | 43 | 382 | 6.63e-15 | 79.3 |
| MS.gene66637.t1 | AT5G57360 | 30.370 | 270 | 175 | 7 | 159 | 425 | 280 | 539 | 3.18e-14 | 77.4 |
| MS.gene66637.t1 | AT5G57360 | 25.763 | 295 | 171 | 10 | 86 | 364 | 342 | 604 | 2.72e-11 | 68.2 |
| MS.gene66637.t1 | AT5G57360 | 30.370 | 270 | 175 | 7 | 159 | 425 | 280 | 539 | 4.82e-14 | 77.0 |
| MS.gene66637.t1 | AT5G57360 | 26.481 | 287 | 163 | 10 | 86 | 356 | 342 | 596 | 6.51e-11 | 66.6 |
| MS.gene66637.t1 | AT2G18915 | 30.370 | 270 | 173 | 9 | 159 | 425 | 281 | 538 | 3.50e-13 | 73.9 |
| MS.gene66637.t1 | AT2G18915 | 30.370 | 270 | 173 | 9 | 159 | 425 | 271 | 528 | 3.95e-13 | 73.9 |
| MS.gene66637.t1 | AT5G27630 | 30.612 | 147 | 92 | 3 | 137 | 277 | 255 | 397 | 1.58e-12 | 72.0 |
| MS.gene66637.t1 | AT5G27630 | 30.612 | 147 | 92 | 3 | 137 | 277 | 255 | 397 | 1.98e-12 | 71.6 |
| MS.gene66637.t1 | AT5G27630 | 37.000 | 100 | 60 | 2 | 148 | 247 | 323 | 419 | 6.83e-11 | 66.6 |
| MS.gene66637.t1 | AT3G05420 | 30.612 | 147 | 92 | 3 | 137 | 277 | 255 | 397 | 2.00e-12 | 71.6 |
| MS.gene66637.t1 | AT3G05420 | 30.612 | 147 | 92 | 3 | 137 | 277 | 254 | 396 | 2.03e-12 | 71.6 |
| MS.gene66637.t1 | AT5G27630 | 30.612 | 147 | 92 | 3 | 137 | 277 | 255 | 397 | 2.14e-12 | 71.6 |
| MS.gene66637.t1 | AT5G27630 | 37.000 | 100 | 60 | 2 | 148 | 247 | 323 | 419 | 6.91e-11 | 66.6 |
| MS.gene66637.t1 | AT5G27630 | 30.612 | 147 | 92 | 3 | 137 | 277 | 255 | 397 | 2.27e-12 | 71.6 |
| MS.gene66637.t1 | AT5G27630 | 37.000 | 100 | 60 | 2 | 148 | 247 | 323 | 419 | 7.20e-11 | 66.6 |
| MS.gene66637.t1 | AT1G68050 | 28.230 | 209 | 147 | 3 | 159 | 366 | 292 | 498 | 4.65e-12 | 70.5 |
Find 0 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32208 | gene | 3192 | 19328 | 3192 | ID=MS.gene66637 |
| 32208 | mRNA | 3192 | 19328 | 3192 | ID=MS.gene66637.t1;Parent=MS.gene66637 |
| 32208 | exon | 3192 | 3612 | 3192 | ID=MS.gene66637.t1.exon1;Parent=MS.gene66637.t1 |
| 32208 | CDS | 3192 | 3612 | 3192 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 9226 | 9286 | 9226 | ID=MS.gene66637.t1.exon2;Parent=MS.gene66637.t1 |
| 32208 | CDS | 9226 | 9286 | 9226 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 9387 | 9465 | 9387 | ID=MS.gene66637.t1.exon3;Parent=MS.gene66637.t1 |
| 32208 | CDS | 9387 | 9465 | 9387 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 9572 | 9651 | 9572 | ID=MS.gene66637.t1.exon4;Parent=MS.gene66637.t1 |
| 32208 | CDS | 9572 | 9651 | 9572 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 9723 | 9817 | 9723 | ID=MS.gene66637.t1.exon5;Parent=MS.gene66637.t1 |
| 32208 | CDS | 9723 | 9817 | 9723 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 9913 | 10012 | 9913 | ID=MS.gene66637.t1.exon6;Parent=MS.gene66637.t1 |
| 32208 | CDS | 9913 | 10012 | 9913 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 11561 | 11630 | 11561 | ID=MS.gene66637.t1.exon7;Parent=MS.gene66637.t1 |
| 32208 | CDS | 11561 | 11630 | 11561 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 12303 | 12404 | 12303 | ID=MS.gene66637.t1.exon8;Parent=MS.gene66637.t1 |
| 32208 | CDS | 12303 | 12404 | 12303 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 12485 | 12566 | 12485 | ID=MS.gene66637.t1.exon9;Parent=MS.gene66637.t1 |
| 32208 | CDS | 12485 | 12566 | 12485 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 13042 | 13221 | 13042 | ID=MS.gene66637.t1.exon10;Parent=MS.gene66637.t1 |
| 32208 | CDS | 13042 | 13221 | 13042 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 13942 | 14215 | 13942 | ID=MS.gene66637.t1.exon11;Parent=MS.gene66637.t1 |
| 32208 | CDS | 13942 | 14215 | 13942 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 14774 | 15002 | 14774 | ID=MS.gene66637.t1.exon12;Parent=MS.gene66637.t1 |
| 32208 | CDS | 14774 | 15002 | 14774 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 15094 | 15264 | 15094 | ID=MS.gene66637.t1.exon13;Parent=MS.gene66637.t1 |
| 32208 | CDS | 15094 | 15264 | 15094 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 15826 | 16064 | 15826 | ID=MS.gene66637.t1.exon14;Parent=MS.gene66637.t1 |
| 32208 | CDS | 15826 | 16064 | 15826 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 16664 | 16748 | 16664 | ID=MS.gene66637.t1.exon15;Parent=MS.gene66637.t1 |
| 32208 | CDS | 16664 | 16748 | 16664 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 16835 | 16933 | 16835 | ID=MS.gene66637.t1.exon16;Parent=MS.gene66637.t1 |
| 32208 | CDS | 16835 | 16933 | 16835 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 17020 | 17219 | 17020 | ID=MS.gene66637.t1.exon17;Parent=MS.gene66637.t1 |
| 32208 | CDS | 17020 | 17219 | 17020 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 17306 | 17381 | 17306 | ID=MS.gene66637.t1.exon18;Parent=MS.gene66637.t1 |
| 32208 | CDS | 17306 | 17381 | 17306 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 18712 | 18847 | 18712 | ID=MS.gene66637.t1.exon19;Parent=MS.gene66637.t1 |
| 32208 | CDS | 18712 | 18847 | 18712 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 18933 | 19069 | 18933 | ID=MS.gene66637.t1.exon20;Parent=MS.gene66637.t1 |
| 32208 | CDS | 18933 | 19069 | 18933 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| 32208 | exon | 19265 | 19328 | 19265 | ID=MS.gene66637.t1.exon21;Parent=MS.gene66637.t1 |
| 32208 | CDS | 19265 | 19328 | 19265 | ID=cds.MS.gene66637.t1;Parent=MS.gene66637.t1 |
| Gene Sequence |
| Protein sequence |
