AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67236

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67236.t1 MTR_5g074400 96.182 550 14 6 1 547 36 581 0.0 1072
MS.gene67236.t1 MTR_3g031220 55.536 569 165 21 2 546 3 507 1.29e-172 498
MS.gene67236.t1 MTR_7g071120 48.178 494 204 14 73 546 30 491 1.85e-131 392
MS.gene67236.t1 MTR_3g031220 57.882 425 114 16 2 403 3 385 4.93e-129 382
MS.gene67236.t1 MTR_3g031220 62.903 62 22 1 383 444 198 258 1.62e-18 88.2
MS.gene67236.t1 MTR_4g013260 48.642 405 150 14 48 446 47 399 2.45e-104 322
MS.gene67236.t1 MTR_3g009470 43.562 466 182 12 47 447 110 559 1.31e-95 306
MS.gene67236.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 1.36e-17 86.7
MS.gene67236.t1 MTR_3g009470 47.253 91 44 3 190 277 477 566 4.07e-15 79.0
MS.gene67236.t1 MTR_5g094430 42.955 440 196 12 26 447 26 428 3.98e-91 290
MS.gene67236.t1 MTR_5g094430 50.649 77 24 2 383 459 200 262 4.27e-15 78.6
MS.gene67236.t1 MTR_3g056100 41.009 456 193 13 28 445 47 464 4.52e-90 288
MS.gene67236.t1 MTR_3g056100 52.000 75 22 2 383 457 243 303 1.92e-15 79.7
MS.gene67236.t1 MTR_3g056100 40.733 464 196 14 28 445 47 477 2.31e-89 286
MS.gene67236.t1 MTR_3g056100 42.056 107 47 3 383 489 243 334 1.29e-15 80.5
MS.gene67236.t1 MTR_7g080020 38.780 508 214 13 25 445 58 555 1.79e-86 284
MS.gene67236.t1 MTR_7g080020 59.701 67 26 1 383 449 280 345 1.01e-16 84.0
MS.gene67236.t1 MTR_7g080020 46.078 102 44 4 206 297 493 593 1.13e-15 80.9
MS.gene67236.t1 MTR_7g011820 40.535 486 210 15 2 460 53 486 2.38e-85 274
MS.gene67236.t1 MTR_3g056100 58.436 243 83 6 203 445 96 320 1.22e-84 270
MS.gene67236.t1 MTR_3g056100 52.000 75 22 2 383 457 99 159 2.20e-15 79.0
MS.gene67236.t1 MTR_3g056100 57.371 251 86 7 203 445 96 333 4.76e-84 268
MS.gene67236.t1 MTR_3g056100 42.056 107 47 3 383 489 99 190 9.59e-16 80.1
MS.gene67236.t1 MTR_7g080000 40.136 441 207 12 43 445 73 494 6.72e-84 275
MS.gene67236.t1 MTR_7g080000 47.222 108 50 5 382 485 233 337 2.04e-15 79.7
MS.gene67236.t1 MTR_5g094430 57.613 243 90 4 205 447 65 294 1.16e-83 266
MS.gene67236.t1 MTR_5g094430 39.496 119 50 3 168 264 171 289 3.09e-16 81.3
MS.gene67236.t1 MTR_5g094430 50.649 77 24 2 383 459 66 128 4.90e-15 77.8
MS.gene67236.t1 MTR_5g094430 57.613 243 90 4 205 447 87 316 1.44e-83 267
MS.gene67236.t1 MTR_5g094430 39.496 119 50 3 168 264 193 311 3.78e-16 81.3
MS.gene67236.t1 MTR_5g094430 50.649 77 24 2 383 459 88 150 5.07e-15 77.8
MS.gene67236.t1 MTR_5g042920 49.485 291 116 9 179 452 112 388 4.44e-79 255
MS.gene67236.t1 MTR_5g042920 41.667 120 64 4 186 301 298 415 9.78e-16 80.1
MS.gene67236.t1 MTR_7g100510 48.438 256 105 6 198 442 181 420 9.61e-75 244
MS.gene67236.t1 MTR_4g082580 48.617 253 83 6 201 452 140 346 6.14e-70 229
MS.gene67236.t1 MTR_3g009470 39.336 422 175 12 47 403 110 515 1.09e-65 222
MS.gene67236.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 5.22e-18 87.4
MS.gene67236.t1 MTR_5g097490 42.629 251 127 4 196 446 82 315 6.49e-53 185
MS.gene67236.t1 MTR_4g130900 36.977 311 167 9 143 445 132 421 3.61e-47 172
MS.gene67236.t1 MTR_5g097500 33.594 256 138 6 193 446 68 293 8.62e-37 139
MS.gene67236.t1 MTR_5g074200 49.286 140 66 3 177 315 192 327 1.04e-33 130
MS.gene67236.t1 MTR_5g074200 50.000 78 35 2 383 457 220 296 3.14e-16 80.5
MS.gene67236.t1 MTR_8g007270 60.870 92 34 1 348 439 121 210 2.86e-33 127
MS.gene67236.t1 MTR_8g007270 36.364 132 64 5 151 262 80 211 1.36e-15 76.6
MS.gene67236.t1 MTR_1g077780 61.798 89 33 1 364 452 43 130 3.88e-32 121
MS.gene67236.t1 MTR_1g077780 45.122 82 39 2 189 264 40 121 1.94e-15 73.9
MS.gene67236.t1 MTR_3g095080 66.216 74 25 0 366 439 151 224 1.35e-29 117
MS.gene67236.t1 MTR_3g095080 55.172 58 25 1 206 262 168 225 1.33e-14 73.9
MS.gene67236.t1 MTR_3g095080 66.216 74 25 0 366 439 127 200 1.57e-29 116
MS.gene67236.t1 MTR_3g095080 55.172 58 25 1 206 262 144 201 1.52e-14 73.6
MS.gene67236.t1 MTR_8g092140 65.333 75 25 1 366 439 142 216 4.16e-28 112
MS.gene67236.t1 MTR_8g092140 55.172 58 25 1 206 262 160 217 1.17e-14 73.9
MS.gene67236.t1 MTR_7g079010 54.444 90 41 0 350 439 108 197 5.96e-27 108
MS.gene67236.t1 MTR_7g079010 50.769 65 31 1 198 261 133 197 1.34e-14 73.6
MS.gene67236.t1 MTR_4g094588 47.581 124 51 2 340 449 122 245 2.27e-26 110
MS.gene67236.t1 MTR_4g094588 55.072 69 30 1 206 273 178 246 5.97e-16 79.7
MS.gene67236.t1 MTR_2g033820 62.338 77 29 0 367 443 187 263 4.52e-26 110
MS.gene67236.t1 MTR_2g033820 52.941 68 31 1 206 272 203 270 6.25e-15 77.0
MS.gene67236.t1 MTR_1g015140 60.526 76 29 1 364 439 84 158 7.10e-26 104
MS.gene67236.t1 MTR_1g015140 50.769 65 31 1 198 261 94 158 1.79e-14 71.6
MS.gene67236.t1 MTR_8g096730 47.059 102 54 0 358 459 45 146 9.72e-26 103
MS.gene67236.t1 MTR_8g096730 56.140 57 24 1 206 261 70 126 4.12e-15 73.2
MS.gene67236.t1 MTR_7g109800 52.747 91 43 0 367 457 129 219 1.01e-25 107
MS.gene67236.t1 MTR_7g109800 37.273 110 62 3 176 278 109 218 3.96e-14 73.6
MS.gene67236.t1 MTR_1g086790 53.846 91 42 0 367 457 142 232 1.04e-25 108
MS.gene67236.t1 MTR_1g086790 51.562 64 30 1 206 268 158 221 9.36e-14 72.8
MS.gene67236.t1 MTR_3g104750 51.190 84 41 0 356 439 77 160 1.18e-25 103
MS.gene67236.t1 MTR_3g104750 52.632 57 26 1 206 261 104 160 1.66e-13 68.9
MS.gene67236.t1 MTR_5g043880 54.878 82 37 0 358 439 99 180 1.21e-24 103
MS.gene67236.t1 MTR_5g043880 57.895 57 23 1 206 261 124 180 1.43e-12 68.6
MS.gene67236.t1 MTR_7g028415 54.321 81 37 0 374 454 84 164 1.68e-24 100
MS.gene67236.t1 MTR_7g028415 52.632 57 26 1 206 261 93 149 2.07e-13 68.9
MS.gene67236.t1 MTR_7g028710 54.321 81 37 0 374 454 84 164 1.68e-24 100
MS.gene67236.t1 MTR_7g028710 52.632 57 26 1 206 261 93 149 2.07e-13 68.9
MS.gene67236.t1 MTR_4g107970 45.946 111 52 3 336 442 132 238 3.25e-24 106
MS.gene67236.t1 MTR_4g107970 52.459 61 27 2 206 264 178 238 1.23e-13 73.9
MS.gene67236.t1 MTR_4g107970 45.946 111 52 3 336 442 209 315 8.11e-24 105
MS.gene67236.t1 MTR_4g107970 52.459 61 27 2 206 264 255 315 1.60e-13 73.6
MS.gene67236.t1 MTR_2g045360 49.020 102 50 2 345 444 172 273 1.19e-23 103
MS.gene67236.t1 MTR_2g045360 39.535 86 45 3 200 278 200 285 2.90e-11 65.9
MS.gene67236.t1 MTR_4g122530 58.442 77 32 0 367 443 192 268 1.22e-23 103
MS.gene67236.t1 MTR_4g122530 53.125 64 29 1 206 268 208 271 1.47e-14 76.3
MS.gene67236.t1 MTR_3g053330 47.727 88 45 1 356 442 224 311 1.59e-23 103
MS.gene67236.t1 MTR_3g053330 40.000 85 49 2 207 289 252 336 2.08e-13 72.8
MS.gene67236.t1 MTR_4g132430 52.381 84 39 1 362 444 106 189 1.71e-23 102
MS.gene67236.t1 MTR_4g132430 49.180 61 29 2 206 264 127 187 2.97e-12 68.6
MS.gene67236.t1 MTR_4g132430 52.381 84 39 1 362 444 240 323 1.07e-22 101
MS.gene67236.t1 MTR_4g132430 49.180 61 29 2 206 264 261 321 7.47e-12 68.2
MS.gene67236.t1 MTR_3g095040 54.667 75 34 0 369 443 104 178 1.12e-22 96.7
MS.gene67236.t1 MTR_3g095040 53.333 60 27 1 206 264 118 177 6.06e-13 68.6
MS.gene67236.t1 MTR_8g092010 53.425 73 34 0 370 442 95 167 1.44e-22 95.5
MS.gene67236.t1 MTR_8g092010 53.333 60 27 1 206 264 108 167 4.63e-13 68.2
MS.gene67236.t1 MTR_2g088000 52.381 84 39 1 362 444 328 411 1.58e-22 102
MS.gene67236.t1 MTR_2g088000 39.759 83 48 2 206 286 349 431 5.08e-12 68.9
MS.gene67236.t1 MTR_2g023930 53.165 79 36 1 365 442 287 365 1.86e-22 101
MS.gene67236.t1 MTR_2g023930 50.000 60 28 2 207 264 306 365 2.58e-12 69.7
MS.gene67236.t1 MTR_4g094412 53.165 79 36 1 367 444 218 296 2.61e-22 100
MS.gene67236.t1 MTR_4g094412 52.459 61 27 2 206 264 234 294 5.18e-13 71.6
MS.gene67236.t1 MTR_4g094412 53.165 79 36 1 367 444 227 305 2.65e-22 100
MS.gene67236.t1 MTR_4g094412 52.459 61 27 2 206 264 243 303 6.06e-13 71.6
MS.gene67236.t1 MTR_7g110720 48.837 86 43 1 367 451 173 258 2.74e-22 99.8
MS.gene67236.t1 MTR_7g110720 50.000 60 28 2 207 264 190 249 4.35e-12 68.6
MS.gene67236.t1 MTR_7g110720 48.837 86 43 1 367 451 200 285 3.23e-22 99.8
MS.gene67236.t1 MTR_7g110720 50.000 60 28 2 207 264 217 276 5.01e-12 68.6
MS.gene67236.t1 MTR_7g009730 55.000 80 31 2 361 439 201 276 1.02e-21 99.4
MS.gene67236.t1 MTR_7g009730 51.724 58 26 2 206 261 219 276 1.88e-11 67.0
MS.gene67236.t1 MTR_4g049790 46.237 93 49 1 353 444 282 374 5.37e-21 97.1
MS.gene67236.t1 MTR_4g049760 37.594 133 82 1 313 444 220 352 7.29e-21 96.7
MS.gene67236.t1 MTR_4g094908 51.765 85 37 2 364 447 250 331 9.49e-21 94.0
MS.gene67236.t1 MTR_4g094908 50.000 58 27 2 207 262 267 324 1.30e-12 69.7
MS.gene67236.t1 MTR_1g078260 47.959 98 47 2 343 439 210 304 1.06e-20 95.5
MS.gene67236.t1 MTR_1g078260 50.847 59 27 2 206 262 247 305 5.72e-11 65.5
MS.gene67236.t1 MTR_1g009613 56.098 82 32 2 364 444 246 324 2.20e-20 92.8
MS.gene67236.t1 MTR_1g009613 54.386 57 24 2 207 261 263 319 1.29e-11 66.6
MS.gene67236.t1 MTR_7g062220 36.735 147 76 3 383 512 124 270 8.49e-20 90.9
MS.gene67236.t1 MTR_7g062220 63.158 57 20 1 206 261 124 180 1.23e-15 78.6
MS.gene67236.t1 MTR_6g086555 49.398 83 41 1 361 442 184 266 2.19e-19 90.9
MS.gene67236.t1 MTR_6g086555 37.168 113 53 5 204 298 204 316 1.52e-13 73.2
MS.gene67236.t1 MTR_6g046600 68.519 54 17 0 222 275 18 71 2.94e-19 84.0
MS.gene67236.t1 MTR_3g106060 53.425 73 31 3 370 439 123 195 3.46e-19 88.6
MS.gene67236.t1 MTR_3g106060 46.667 90 39 4 207 287 139 228 1.69e-15 77.8
MS.gene67236.t1 MTR_5g016610 51.899 79 37 1 364 441 180 258 7.26e-19 87.0
MS.gene67236.t1 MTR_5g016610 50.000 58 27 2 207 262 200 257 2.98e-12 67.8
MS.gene67236.t1 MTR_4g007060 43.396 106 49 4 353 453 103 202 1.53e-18 86.7
MS.gene67236.t1 MTR_4g007060 51.667 60 27 2 207 264 129 188 4.01e-14 73.6
MS.gene67236.t1 MTR_4g127040 48.276 87 44 1 363 448 225 311 2.28e-18 86.7
MS.gene67236.t1 MTR_1g013790 50.794 63 30 1 381 442 99 161 2.30e-18 85.5
MS.gene67236.t1 MTR_1g013790 44.286 70 37 2 207 274 102 171 2.77e-12 67.4
MS.gene67236.t1 MTR_4g007060 43.396 106 49 4 353 453 137 236 2.32e-18 86.7
MS.gene67236.t1 MTR_4g007060 51.667 60 27 2 207 264 163 222 5.95e-14 73.6
MS.gene67236.t1 MTR_2g105060 54.688 64 28 1 381 443 92 155 2.83e-18 84.7
MS.gene67236.t1 MTR_2g105060 50.000 60 28 2 207 264 95 154 6.85e-13 68.9
MS.gene67236.t1 MTR_5g091390 39.744 156 70 3 369 517 143 281 3.19e-18 85.9
MS.gene67236.t1 MTR_5g091390 52.239 67 31 1 206 271 157 223 1.06e-14 75.5
MS.gene67236.t1 MTR_2g105060 54.688 64 28 1 381 443 167 230 4.53e-18 85.9
MS.gene67236.t1 MTR_2g105060 50.000 60 28 2 207 264 170 229 9.91e-13 69.7
MS.gene67236.t1 MTR_1g013760 41.935 93 47 4 353 439 106 197 6.89e-18 84.7
MS.gene67236.t1 MTR_1g013760 50.877 57 26 2 207 261 141 197 2.03e-13 71.2
MS.gene67236.t1 MTR_3g108960 48.718 78 39 1 364 440 295 372 2.32e-16 81.6
MS.gene67236.t1 MTR_5g093540 40.323 124 50 5 196 315 146 249 3.03e-16 79.0
MS.gene67236.t1 MTR_4g047580 36.752 117 64 2 338 444 227 343 5.22e-16 81.3
MS.gene67236.t1 MTR_1g070455 49.351 77 38 1 364 439 274 350 5.30e-16 80.1
MS.gene67236.t1 MTR_1g070455 54.237 59 25 2 207 263 294 352 4.17e-13 71.2
MS.gene67236.t1 MTR_2g016770 52.381 63 29 1 384 445 36 98 3.33e-15 75.1
MS.gene67236.t1 MTR_2g016770 50.000 60 28 2 207 264 36 95 8.27e-12 65.5
MS.gene67236.t1 MTR_8g087000 40.000 90 51 2 384 470 78 167 3.90e-15 75.9
MS.gene67236.t1 MTR_8g087000 39.785 93 48 4 207 297 78 164 5.05e-12 66.6
MS.gene67236.t1 MTR_2g024350 53.226 62 28 1 384 444 9 70 3.96e-15 75.1
MS.gene67236.t1 MTR_2g024350 58.333 60 23 2 207 264 9 68 6.79e-15 74.7
MS.gene67236.t1 MTR_8g087000 40.000 90 51 2 384 470 77 166 4.03e-15 75.5
MS.gene67236.t1 MTR_8g087000 39.785 93 48 4 207 297 77 163 5.37e-12 66.2
MS.gene67236.t1 MTR_2g016770 52.381 63 29 1 384 445 28 90 4.30e-15 74.7
MS.gene67236.t1 MTR_2g016770 50.000 60 28 2 207 264 28 87 1.09e-11 64.7
MS.gene67236.t1 MTR_0117s0040 35.333 150 81 6 364 499 57 204 6.42e-15 75.1
MS.gene67236.t1 MTR_7g109600 46.575 73 38 1 384 455 54 126 1.18e-14 74.7
MS.gene67236.t1 MTR_7g109600 51.667 60 27 2 207 264 54 113 2.15e-11 65.1
MS.gene67236.t1 MTR_2g024380 58.333 60 23 2 207 264 252 311 2.21e-14 75.9
MS.gene67236.t1 MTR_2g024380 54.098 61 27 1 384 443 252 312 4.21e-14 75.1
MS.gene67236.t1 MTR_8g067650 51.471 68 31 2 203 268 336 403 7.10e-14 74.7
MS.gene67236.t1 MTR_8g067650 50.000 64 31 1 381 443 337 400 1.80e-12 70.1
MS.gene67236.t1 MTR_1g099600 38.947 95 56 2 364 457 167 260 8.47e-14 72.8
MS.gene67236.t1 MTR_1g099600 49.315 73 33 3 205 275 184 254 1.08e-12 69.7
MS.gene67236.t1 MTR_1g077760 67.500 40 13 0 364 403 95 134 2.39e-13 67.8
MS.gene67236.t1 MTR_8g067635 31.579 171 96 5 203 357 346 511 3.58e-13 72.4
MS.gene67236.t1 MTR_8g067635 50.000 64 31 1 381 443 347 410 1.32e-12 70.5
MS.gene67236.t1 MTR_5g044695 54.167 48 22 0 362 409 56 103 6.16e-13 65.5
MS.gene67236.t1 MTR_2g083870 47.619 63 32 1 384 445 81 143 6.62e-13 69.3
MS.gene67236.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 6.84e-13 71.2
MS.gene67236.t1 MTR_8g098945 43.243 74 41 1 382 454 128 201 7.24e-13 69.3
MS.gene67236.t1 MTR_8g098945 43.011 93 44 5 207 292 130 220 3.10e-12 67.8
MS.gene67236.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 7.71e-13 70.9
MS.gene67236.t1 MTR_8g069935 44.578 83 44 2 205 285 330 412 9.19e-13 70.9
MS.gene67236.t1 MTR_8g069935 42.857 63 35 1 383 444 331 393 1.43e-11 67.0
MS.gene67236.t1 MTR_3g095080 63.415 41 15 0 366 406 151 191 1.84e-12 66.6
MS.gene67236.t1 MTR_8g028565 46.154 78 40 2 384 460 156 232 1.90e-12 68.9
MS.gene67236.t1 MTR_3g090860 51.724 58 24 2 206 259 133 190 2.72e-12 68.6
MS.gene67236.t1 MTR_3g090860 42.683 82 37 2 382 460 132 206 7.30e-12 67.4
MS.gene67236.t1 MTR_8g099350 51.724 58 24 2 206 259 132 189 2.97e-12 68.6
MS.gene67236.t1 MTR_8g099350 32.308 130 60 3 383 509 132 236 3.78e-11 65.5
MS.gene67236.t1 MTR_5g067680 48.276 58 26 2 206 259 202 259 3.76e-12 68.2
MS.gene67236.t1 MTR_5g067680 48.276 58 27 1 383 437 202 259 1.74e-11 66.2
MS.gene67236.t1 MTR_7g079040 47.692 65 33 1 384 447 155 219 6.73e-12 67.4
MS.gene67236.t1 MTR_4g007060 40.244 82 43 2 353 433 137 213 1.60e-11 65.1
MS.gene67236.t1 MTR_6g038890 54.167 48 22 0 362 409 167 214 1.73e-11 64.3
MS.gene67236.t1 MTR_6g053200 29.412 119 72 3 383 496 330 441 2.71e-11 66.6
MS.gene67236.t1 MTR_4g021780 46.875 64 33 1 202 265 19 81 8.74e-11 59.7
MS.gene67236.t1 MTR_8g027860 42.254 71 32 3 206 272 136 201 9.69e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67236.t1 AT2G38470 46.618 547 198 20 26 546 40 518 1.82e-112 344
MS.gene67236.t1 AT2G03340 44.394 437 188 14 27 462 108 490 8.73e-94 296
MS.gene67236.t1 AT5G07100 44.681 423 99 11 24 445 8 296 1.51e-93 288
MS.gene67236.t1 AT4G26640 41.627 418 222 7 43 452 7 410 9.48e-91 288
MS.gene67236.t1 AT4G26640 41.627 418 222 7 43 452 47 450 2.07e-90 288
MS.gene67236.t1 AT2G30250 43.750 464 163 14 2 444 3 389 1.32e-89 281
MS.gene67236.t1 AT2G30250 48.780 82 39 2 192 270 312 393 6.83e-16 80.1
MS.gene67236.t1 AT1G13960 41.958 429 173 10 27 442 103 468 2.05e-85 274
MS.gene67236.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.97e-85 269
MS.gene67236.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.97e-85 269
MS.gene67236.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.97e-85 269
MS.gene67236.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.97e-85 269
MS.gene67236.t1 AT4G26640 54.826 259 98 5 200 452 133 378 1.40e-84 271
MS.gene67236.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.16e-82 256
MS.gene67236.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.16e-82 256
MS.gene67236.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.16e-82 256
MS.gene67236.t1 AT5G07100 57.438 242 41 5 205 445 23 203 2.16e-82 256
MS.gene67236.t1 AT1G13960 51.724 261 102 4 195 442 66 315 5.04e-79 253
MS.gene67236.t1 AT4G26440 48.485 297 109 6 205 461 177 469 6.57e-75 248
MS.gene67236.t1 AT3G01080 51.261 238 78 4 205 442 204 403 2.16e-70 233
MS.gene67236.t1 AT3G01080 59.091 66 26 1 383 448 205 269 4.77e-17 84.3
MS.gene67236.t1 AT3G01080 47.674 86 42 2 182 264 318 403 7.88e-17 83.6
MS.gene67236.t1 AT3G01080 51.261 238 78 4 205 442 166 365 2.47e-70 232
MS.gene67236.t1 AT3G01080 59.091 66 26 1 383 448 167 231 5.07e-17 84.0
MS.gene67236.t1 AT3G01080 47.674 86 42 2 182 264 280 365 7.88e-17 83.2
MS.gene67236.t1 AT2G37260 48.864 264 102 6 198 441 77 327 7.69e-63 210
MS.gene67236.t1 AT2G37260 48.864 264 102 6 198 441 75 325 9.17e-63 209
MS.gene67236.t1 AT2G37260 48.864 264 102 6 198 441 157 407 4.42e-62 210
MS.gene67236.t1 AT2G04880 45.528 246 117 4 206 445 111 345 1.53e-61 210
MS.gene67236.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.09e-16 82.4
MS.gene67236.t1 AT2G04880 55.882 68 29 1 198 264 275 342 5.67e-16 80.9
MS.gene67236.t1 AT2G04880 43.446 267 116 6 206 445 111 369 6.75e-61 209
MS.gene67236.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.47e-16 82.4
MS.gene67236.t1 AT2G04880 55.882 68 29 1 198 264 299 366 6.18e-16 80.9
MS.gene67236.t1 AT4G30935 42.194 237 123 5 207 443 169 391 1.96e-48 175
MS.gene67236.t1 AT4G30935 50.000 70 34 1 207 275 332 401 3.06e-15 78.6
MS.gene67236.t1 AT5G56270 78.431 102 20 1 344 445 450 549 4.34e-47 175
MS.gene67236.t1 AT5G56270 39.648 227 119 4 54 269 117 336 4.25e-33 134
MS.gene67236.t1 AT5G56270 51.282 78 35 2 190 264 469 546 1.78e-15 80.1
MS.gene67236.t1 AT5G56270 60.000 60 23 1 383 442 273 331 1.85e-15 80.1
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 9.38e-46 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.23e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 9.38e-46 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.23e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.02e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.76e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.03e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.31e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.04e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.19e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.04e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.19e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.05e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.46e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 391 594 1.10e-45 173
MS.gene67236.t1 AT4G12020 48.529 68 34 1 382 449 400 466 9.26e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.14e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.62e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 1.16e-45 173
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 8.77e-12 68.9
MS.gene67236.t1 AT4G12020 47.143 210 104 4 195 403 458 661 2.23e-45 172
MS.gene67236.t1 AT4G12020 50.820 61 29 1 382 442 467 526 1.10e-11 68.6
MS.gene67236.t1 AT2G44745 60.215 93 36 1 348 439 109 201 1.17e-33 127
MS.gene67236.t1 AT2G44745 59.649 57 22 1 206 261 145 201 1.88e-15 76.3
MS.gene67236.t1 AT4G39410 64.474 76 27 0 364 439 204 279 5.48e-28 114
MS.gene67236.t1 AT4G39410 45.946 74 37 2 192 262 207 280 2.20e-13 71.6
MS.gene67236.t1 AT1G55600 60.241 83 33 0 362 444 286 368 7.58e-28 117
MS.gene67236.t1 AT1G55600 55.932 59 25 1 207 264 308 366 3.81e-14 75.5
MS.gene67236.t1 AT1G29860 51.376 109 42 2 350 447 93 201 1.31e-26 109
MS.gene67236.t1 AT1G29860 49.333 75 36 2 206 279 136 209 7.77e-15 75.5
MS.gene67236.t1 AT4G18170 62.338 77 29 0 367 443 156 232 1.89e-26 110
MS.gene67236.t1 AT4G18170 38.571 140 83 3 206 343 172 310 2.11e-14 74.7
MS.gene67236.t1 AT3G01080 70.312 64 19 0 205 268 204 267 3.73e-26 109
MS.gene67236.t1 AT3G01080 59.091 66 26 1 383 448 205 269 1.08e-17 84.7
MS.gene67236.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.26e-26 108
MS.gene67236.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.69e-12 68.6
MS.gene67236.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.26e-26 108
MS.gene67236.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.69e-12 68.6
MS.gene67236.t1 AT1G69310 60.256 78 31 0 362 439 126 203 6.26e-26 108
MS.gene67236.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.69e-12 68.6
MS.gene67236.t1 AT1G64000 59.211 76 31 0 364 439 95 170 1.31e-25 104
MS.gene67236.t1 AT1G64000 56.140 57 24 1 206 261 114 170 5.29e-15 74.3
MS.gene67236.t1 AT5G41570 59.211 76 31 0 364 439 79 154 1.64e-25 103
MS.gene67236.t1 AT5G41570 56.140 57 24 1 206 261 98 154 1.30e-14 72.8
MS.gene67236.t1 AT5G13080 53.012 83 39 0 370 452 54 136 8.31e-25 100
MS.gene67236.t1 AT5G13080 54.386 57 25 1 206 261 67 123 3.34e-15 73.6
MS.gene67236.t1 AT5G49520 61.728 81 30 1 367 446 205 285 9.49e-25 107
MS.gene67236.t1 AT5G49520 53.125 64 29 1 206 268 221 284 7.28e-14 73.9
MS.gene67236.t1 AT5G26170 58.571 70 29 0 370 439 100 169 1.02e-24 101
MS.gene67236.t1 AT5G26170 51.724 58 27 1 206 262 113 170 1.49e-14 72.4
MS.gene67236.t1 AT5G46350 52.688 93 44 0 369 461 169 261 1.38e-24 105
MS.gene67236.t1 AT5G46350 50.000 72 35 1 198 268 175 246 3.83e-13 71.2
MS.gene67236.t1 AT2G46130 53.571 84 39 0 356 439 3 86 2.56e-24 98.2
MS.gene67236.t1 AT2G46130 59.649 57 22 1 206 261 30 86 7.38e-16 73.9
MS.gene67236.t1 AT2G47260 59.211 76 31 0 367 442 158 233 3.09e-24 104
MS.gene67236.t1 AT2G47260 53.125 64 29 1 206 268 174 237 3.59e-14 74.3
MS.gene67236.t1 AT1G62300 42.657 143 68 5 314 442 230 372 5.22e-24 106
MS.gene67236.t1 AT1G62300 50.000 60 28 2 207 264 313 372 1.35e-11 67.4
MS.gene67236.t1 AT3G01970 62.500 72 27 0 370 441 52 123 8.54e-24 97.8
MS.gene67236.t1 AT3G01970 57.627 59 22 2 206 262 65 122 4.30e-13 67.4
MS.gene67236.t1 AT4G04450 52.809 89 41 1 357 444 172 260 9.07e-24 104
MS.gene67236.t1 AT4G04450 43.836 73 39 2 207 277 199 271 3.50e-12 68.9
MS.gene67236.t1 AT5G15130 53.846 78 35 1 366 442 168 245 1.56e-23 104
MS.gene67236.t1 AT5G15130 44.595 74 39 2 206 277 185 258 3.02e-12 69.3
MS.gene67236.t1 AT5G64810 57.746 71 30 0 370 440 97 167 1.60e-23 98.6
MS.gene67236.t1 AT5G64810 50.877 57 27 1 206 261 110 166 1.62e-12 67.0
MS.gene67236.t1 AT5G15130 53.846 78 35 1 366 442 210 287 2.09e-23 104
MS.gene67236.t1 AT5G15130 44.595 74 39 2 206 277 227 300 2.85e-12 69.7
MS.gene67236.t1 AT4G04450 52.809 89 41 1 357 444 266 354 4.33e-23 103
MS.gene67236.t1 AT4G04450 43.836 73 39 2 207 277 293 365 5.68e-12 68.6
MS.gene67236.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.11e-22 102
MS.gene67236.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.06e-11 67.8
MS.gene67236.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.11e-22 102
MS.gene67236.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.06e-11 67.8
MS.gene67236.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.11e-22 102
MS.gene67236.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.06e-11 67.8
MS.gene67236.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.11e-22 102
MS.gene67236.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.06e-11 67.8
MS.gene67236.t1 AT1G68150 53.165 79 36 1 367 444 219 297 2.37e-22 99.4
MS.gene67236.t1 AT1G68150 52.459 61 27 2 206 264 235 295 2.97e-13 72.0
MS.gene67236.t1 AT1G18860 52.564 78 36 1 366 442 222 299 1.88e-21 98.2
MS.gene67236.t1 AT1G18860 50.820 61 28 2 206 264 239 299 3.05e-11 66.2
MS.gene67236.t1 AT1G69310 56.410 78 30 1 362 439 126 199 3.08e-21 94.4
MS.gene67236.t1 AT3G62340 47.525 101 43 1 367 467 102 192 6.91e-21 93.2
MS.gene67236.t1 AT3G62340 50.000 74 35 2 206 277 118 191 2.82e-13 70.9
MS.gene67236.t1 AT4G01720 54.545 77 34 1 367 442 223 299 1.33e-20 95.5
MS.gene67236.t1 AT4G01720 37.037 108 60 4 165 264 192 299 2.19e-11 66.6
MS.gene67236.t1 AT2G46130 50.000 84 38 1 356 439 3 82 9.50e-20 85.1
MS.gene67236.t1 AT2G46130 54.386 57 21 2 206 261 30 82 2.44e-11 61.2
MS.gene67236.t1 AT2G21900 50.000 76 35 1 372 444 95 170 1.40e-19 87.8
MS.gene67236.t1 AT2G21900 46.269 67 35 1 206 271 109 175 8.70e-13 67.8
MS.gene67236.t1 AT4G31550 55.128 78 31 2 364 440 229 303 1.89e-19 90.1
MS.gene67236.t1 AT4G31550 49.333 75 36 2 207 279 246 320 7.73e-14 73.2
MS.gene67236.t1 AT4G31550 55.128 78 31 2 364 440 230 304 1.91e-19 90.1
MS.gene67236.t1 AT4G31550 49.333 75 36 2 207 279 247 321 8.63e-14 73.2
MS.gene67236.t1 AT2G24570 57.143 77 29 2 364 439 227 300 2.40e-19 89.7
MS.gene67236.t1 AT2G24570 54.386 57 24 2 207 261 244 300 5.83e-13 70.5
MS.gene67236.t1 AT4G24240 52.500 80 37 1 363 441 261 340 2.41e-19 90.1
MS.gene67236.t1 AT4G24240 53.448 58 25 2 207 262 282 339 4.08e-13 71.2
MS.gene67236.t1 AT2G23320 50.633 79 35 2 364 441 224 299 2.56e-19 89.4
MS.gene67236.t1 AT2G23320 53.448 58 25 2 207 262 241 298 2.06e-12 68.9
MS.gene67236.t1 AT4G31800 50.704 71 33 2 376 444 103 173 1.54e-18 85.9
MS.gene67236.t1 AT4G31800 38.776 98 55 4 197 290 100 196 1.51e-14 73.9
MS.gene67236.t1 AT4G31800 50.704 71 33 2 376 444 168 238 2.98e-18 86.3
MS.gene67236.t1 AT4G31800 38.776 98 55 4 197 290 165 261 2.70e-14 74.3
MS.gene67236.t1 AT1G80840 51.562 64 30 1 381 443 144 207 3.07e-18 85.9
MS.gene67236.t1 AT1G80840 53.333 60 26 2 207 264 147 206 4.15e-13 70.9
MS.gene67236.t1 AT5G43290 43.434 99 38 2 359 439 72 170 1.45e-17 83.6
MS.gene67236.t1 AT5G43290 63.793 58 20 1 205 261 113 170 4.94e-16 79.0
MS.gene67236.t1 AT5G28650 50.649 77 37 1 364 439 243 319 1.69e-17 84.3
MS.gene67236.t1 AT5G28650 54.237 59 25 2 207 263 263 321 8.15e-13 70.1
MS.gene67236.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.73e-17 82.4
MS.gene67236.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.13e-13 68.6
MS.gene67236.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.73e-17 82.4
MS.gene67236.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.13e-13 68.6
MS.gene67236.t1 AT2G25000 50.000 64 31 1 382 444 124 187 3.53e-17 82.0
MS.gene67236.t1 AT2G25000 47.619 63 31 2 207 267 126 188 1.22e-12 68.6
MS.gene67236.t1 AT2G25000 50.000 64 31 1 382 444 145 208 5.15e-17 81.6
MS.gene67236.t1 AT2G25000 47.619 63 31 2 207 267 147 209 1.74e-12 68.6
MS.gene67236.t1 AT3G04670 50.649 77 37 1 364 439 243 319 5.27e-17 82.8
MS.gene67236.t1 AT3G04670 52.542 59 26 2 207 263 263 321 1.22e-12 69.7
MS.gene67236.t1 AT1G69810 46.835 79 40 2 366 442 128 206 7.98e-17 82.4
MS.gene67236.t1 AT2G30590 51.948 77 36 1 364 439 294 370 9.10e-17 82.8
MS.gene67236.t1 AT2G30590 54.237 59 25 2 207 263 314 372 5.49e-12 68.2
MS.gene67236.t1 AT1G69810 46.835 79 40 2 366 442 186 264 1.06e-16 82.8
MS.gene67236.t1 AT4G23550 44.156 77 42 1 372 447 129 205 4.99e-15 76.6
MS.gene67236.t1 AT5G52830 40.404 99 56 3 364 460 147 244 1.01e-13 73.2
MS.gene67236.t1 AT5G52830 44.048 84 43 3 205 286 164 245 2.91e-12 68.6
MS.gene67236.t1 AT1G29280 50.000 60 29 1 384 442 75 134 1.56e-13 71.2
MS.gene67236.t1 AT4G01250 50.769 65 31 1 384 447 129 193 1.60e-13 72.0
MS.gene67236.t1 AT5G24110 38.182 110 51 3 197 302 104 200 4.19e-13 70.9
MS.gene67236.t1 AT2G40740 36.283 113 52 4 330 438 135 231 1.25e-12 69.3
MS.gene67236.t1 AT2G40740 33.884 121 66 6 206 321 173 284 5.24e-12 67.4
MS.gene67236.t1 AT3G58710 48.387 62 31 1 384 444 72 133 1.63e-12 68.6
MS.gene67236.t1 AT2G40740 36.283 113 52 4 330 438 144 240 1.66e-12 68.9
MS.gene67236.t1 AT2G40740 33.884 121 66 6 206 321 182 293 7.14e-12 67.0
MS.gene67236.t1 AT3G58710 48.387 62 31 1 384 444 71 132 1.74e-12 68.6
MS.gene67236.t1 AT2G34830 37.624 101 54 2 346 445 195 287 4.37e-12 68.6
MS.gene67236.t1 AT2G34830 37.624 101 54 2 346 445 186 278 4.87e-12 68.6
MS.gene67236.t1 AT1G30650 37.624 101 54 2 346 445 188 280 5.98e-12 68.2
MS.gene67236.t1 AT4G23810 45.588 68 33 2 197 260 149 216 5.56e-11 64.7
MS.gene67236.t1 AT2G46400 41.772 79 39 3 206 277 104 182 6.42e-11 63.9
MS.gene67236.t1 AT4G11070 45.588 68 31 3 197 259 100 166 6.44e-11 63.9
MS.gene67236.t1 AT5G45050 46.154 65 34 1 384 447 1042 1106 7.09e-11 65.9
MS.gene67236.t1 AT5G45050 46.154 65 34 1 384 447 1153 1217 7.43e-11 65.9
MS.gene67236.t1 AT5G45050 46.154 65 34 1 384 447 1181 1245 7.59e-11 65.9
MS.gene67236.t1 AT4G11070 45.588 68 31 3 197 259 132 198 8.50e-11 63.9

Find 135 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTGTGGTTGCTGGTAAC+TGG 0.245732 5.1:+57103704 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5.1:-57103523 MS.gene67236:CDS
TCAAGGAACATGTCATCTTT+AGG 0.289714 5.1:+57101795 None:intergenic
GGATACAATTGGCGAAAATA+TGG 0.295221 5.1:-57103648 MS.gene67236:CDS
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5.1:+57102014 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.301577 5.1:-57101843 MS.gene67236:CDS
ATCATCTGATCTTCGGCTTA+AGG 0.306175 5.1:+57103671 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5.1:-57102142 MS.gene67236:CDS
GAGTTGGTTGCTGTGGTTGC+TGG 0.312817 5.1:+57103697 None:intergenic
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5.1:+57103570 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5.1:-57101924 MS.gene67236:CDS
ATTTCATTGATTGGATTAAC+AGG 0.319458 5.1:+57103426 None:intergenic
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5.1:+57102903 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5.1:+57105136 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5.1:+57101934 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5.1:+57104385 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5.1:-57102831 MS.gene67236:CDS
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5.1:-57104464 MS.gene67236:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5.1:+57101995 None:intergenic
TGATCATGGATTTCATTGAT+TGG 0.366627 5.1:+57103417 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5.1:+57104386 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5.1:+57102170 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5.1:+57105070 None:intergenic
GTGCATTTGTAGTAACTTCT+CGG 0.379548 5.1:+57103597 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5.1:+57102032 None:intergenic
AAATCCATTGTTGGTGTTGT+TGG 0.383862 5.1:+57103740 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5.1:+57102023 None:intergenic
GAGAATTCTTCAATATCAAT+TGG 0.394609 5.1:-57103345 MS.gene67236:CDS
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5.1:-57102814 MS.gene67236:CDS
CAGCAGAAGGAGAAGCTAAA+AGG 0.400048 5.1:+57105242 None:intergenic
TTCAGCAAAGCAAAGATTCA+AGG 0.408387 5.1:+57101778 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5.1:-57105121 MS.gene67236:CDS
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5.1:+57103561 None:intergenic
TTGAGAATCCATAATTTCCT+TGG 0.432499 5.1:+57101916 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5.1:-57102120 MS.gene67236:CDS
TGTATCCATCATCTGATCTT+CGG 0.437503 5.1:+57103664 None:intergenic
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5.1:-57103631 MS.gene67236:CDS
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5.1:+57104483 None:intergenic
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5.1:+57105163 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5.1:+57105160 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5.1:-57102080 MS.gene67236:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5.1:+57105091 None:intergenic
CTCAAGGTTTGATAATCAAA+TGG 0.448868 5.1:-57101898 MS.gene67236:CDS
TGCTGTTGTTGATTCATGTA+AGG 0.449558 5.1:+57101873 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5.1:-57105213 MS.gene67236:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5.1:-57103630 MS.gene67236:CDS
GTTACTGAGATAGTTTATAA+GGG 0.464337 5.1:-57103522 MS.gene67236:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5.1:+57102077 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5.1:-57101940 MS.gene67236:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5.1:-57102141 MS.gene67236:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5.1:-57103550 MS.gene67236:CDS
CACCACCAGATCGACTCCTT+TGG 0.467879 5.1:+57103292 None:intergenic
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5.1:+57105127 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5.1:+57102038 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.475349 5.1:+57103348 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5.1:+57103571 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5.1:+57102054 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5.1:-57102813 MS.gene67236:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5.1:-57102859 MS.gene67236:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5.1:+57102161 None:intergenic
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5.1:+57103681 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5.1:-57104342 MS.gene67236:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5.1:-57102010 MS.gene67236:CDS
GCAGCAGCAACAACAACAAA+TGG 0.490866 5.1:-57101853 MS.gene67236:CDS
GATCAGATGATGGATACAAT+TGG 0.492867 5.1:-57103659 MS.gene67236:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5.1:+57103762 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.516687 5.1:+57101815 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5.1:+57102024 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5.1:+57101942 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5.1:-57103393 MS.gene67236:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5.1:-57101933 MS.gene67236:CDS
CACGAGCAGCGGGGACATCA+TGG 0.524422 5.1:+57102087 None:intergenic
AGGAGTCGATCTGGTGGTGC+TGG 0.525212 5.1:-57103288 MS.gene67236:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5.1:-57103385 MS.gene67236:CDS
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5.1:+57102171 None:intergenic
GTTGTCTGAACTACAACTCT+AGG 0.534551 5.1:+57102879 None:intergenic
AAGGTTTGAGTTGGTTGCTG+TGG 0.535972 5.1:+57103690 None:intergenic
TCTCACCAAAGGAGTCGATC+TGG 0.539091 5.1:-57103297 MS.gene67236:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5.1:+57102841 None:intergenic
AAGGAAATTATGGATTCTCA+AGG 0.541036 5.1:-57101914 MS.gene67236:CDS
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5.1:-57103549 MS.gene67236:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5.1:-57104427 MS.gene67236:CDS
GTCTGATTGAAATCCATTGT+TGG 0.544770 5.1:+57103731 None:intergenic
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5.1:+57104372 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5.1:-57102086 MS.gene67236:CDS
GTGATGCATATGACTGATCA+TGG 0.555757 5.1:+57103403 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5.1:+57105103 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5.1:+57103480 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5.1:+57105164 None:intergenic
TGTCCTTGAGGTGCTTGCTG+TGG 0.563779 5.1:+57101969 None:intergenic
CAAACCAACAACACCAACAA+TGG 0.565174 5.1:-57103744 MS.gene67236:CDS
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5.1:+57104353 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5.1:-57104447 MS.gene67236:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5.1:-57104448 MS.gene67236:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5.1:+57104489 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5.1:+57105165 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5.1:-57102842 MS.gene67236:CDS
TGGTTTCTCCTCTAGAGCTA+AGG 0.577015 5.1:-57101823 MS.gene67236:CDS
TTAAGCCGAAGATCAGATGA+TGG 0.580885 5.1:-57103669 MS.gene67236:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5.1:+57102076 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5.1:-57105212 MS.gene67236:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5.1:+57105137 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5.1:-57103308 MS.gene67236:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5.1:-57103454 MS.gene67236:CDS
AATTCTTCAATATCAATTGG+AGG 0.586744 5.1:-57103342 MS.gene67236:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5.1:-57103878 MS.gene67236:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5.1:-57102018 MS.gene67236:CDS
TGTGGCCTCTGACTCTGAAG+AGG 0.590935 5.1:+57101987 None:intergenic
GACATTGATATCCTGGATGA+TGG 0.594877 5.1:-57102852 MS.gene67236:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5.1:+57105139 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5.1:-57103248 MS.gene67236:intron
GCATAACAGGAGAATCAAGA+AGG 0.606162 5.1:+57105083 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5.1:-57102026 MS.gene67236:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5.1:-57102797 MS.gene67236:intron
TGGATGATGGTTACAGATGG+AGG 0.611243 5.1:-57102839 MS.gene67236:CDS
GCTGTGATCACAACTTATGA+GGG 0.613415 5.1:-57102119 MS.gene67236:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5.1:+57105092 None:intergenic
CACCAAAGGAGTCGATCTGG+TGG 0.618731 5.1:-57103294 MS.gene67236:CDS
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5.1:-57101992 MS.gene67236:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5.1:+57101957 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5.1:+57105229 None:intergenic
TGGTGATGAATTTGATGAAG+AGG 0.626753 5.1:-57103268 MS.gene67236:CDS
AGGCCACAGCAAGCACCTCA+AGG 0.632749 5.1:-57101972 MS.gene67236:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5.1:-57103488 MS.gene67236:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5.1:-57105211 MS.gene67236:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5.1:+57105138 None:intergenic
ATTTGATGAAGAGGAACCTG+AGG 0.654470 5.1:-57103259 MS.gene67236:CDS
CACAGCCCTTAAATCATGTG+AGG 0.655326 5.1:+57102136 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5.1:+57105166 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5.1:-57101939 MS.gene67236:CDS
GATCAGTCATATGCATCACA+TGG 0.661879 5.1:-57103399 MS.gene67236:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5.1:-57104446 MS.gene67236:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5.1:+57105106 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5.1:+57102078 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5.1:-57102175 MS.gene67236:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTAATCAATTGA+AGG - chr5.1:57102401-57102420 MS.gene67236:intron 10.0%
!! AAAACATTGAATCATATTTA+TGG + chr5.1:57103850-57103869 None:intergenic 15.0%
!!! CTTTAGTTTTTTTTTTTTGT+TGG - chr5.1:57102439-57102458 MS.gene67236:intron 15.0%
!!! TAAGTTTACATAAAATTTTC+AGG - chr5.1:57104079-57104098 MS.gene67236:intron 15.0%
!!! TTATTTGTTTTTTTTGACAT+GGG - chr5.1:57102087-57102106 MS.gene67236:CDS 15.0%
!!! TTTATTTGTTTTTTTTGACA+TGG - chr5.1:57102086-57102105 MS.gene67236:CDS 15.0%
!!! TTTTATTTTATTTCAACACT+TGG - chr5.1:57103822-57103841 MS.gene67236:CDS 15.0%
!! AAAATGAAAGAAACTAACAT+TGG + chr5.1:57101993-57102012 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG - chr5.1:57101829-57101848 MS.gene67236:CDS 20.0%
!! ATATTATTATATTGTGGTTG+TGG - chr5.1:57103985-57104004 MS.gene67236:intron 20.0%
!! CTTGATATATTCATTTATGT+AGG - chr5.1:57104037-57104056 MS.gene67236:intron 20.0%
!! GAGATTAAAAAAATTGAAGT+TGG - chr5.1:57102841-57102860 MS.gene67236:CDS 20.0%
!! GCAATAAATGCTTATAAAAT+TGG + chr5.1:57102746-57102765 None:intergenic 20.0%
!! GCTCATATATTATTATATTG+TGG - chr5.1:57103979-57103998 MS.gene67236:intron 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG - chr5.1:57104090-57104109 MS.gene67236:intron 20.0%
!!! AGTTAGTTATTTTTTTACCT+TGG + chr5.1:57104264-57104283 None:intergenic 20.0%
!!! TTATTTTTTTACCTTGGATT+TGG + chr5.1:57104258-57104277 None:intergenic 20.0%
!!! TTTATGTAGGTTTTATTTCA+TGG - chr5.1:57104050-57104069 MS.gene67236:intron 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG - chr5.1:57102353-57102372 MS.gene67236:intron 20.0%
! AAAAATGAAGGTGAAAATGA+GGG - chr5.1:57104102-57104121 MS.gene67236:intron 25.0%
! AAATATTACCTAGTCAAATG+TGG - chr5.1:57104394-57104413 MS.gene67236:CDS 25.0%
! AATGCTGTTACTGAATTTAT+GGG - chr5.1:57102487-57102506 MS.gene67236:intron 25.0%
! AATTCTTCAATATCAATTGG+AGG - chr5.1:57103699-57103718 MS.gene67236:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG + chr5.1:57103099-57103118 None:intergenic 25.0%
! AGAAATAGCCAAATTAGAAA+AGG + chr5.1:57104542-57104561 None:intergenic 25.0%
! AGTTACTGAGATAGTTTATA+AGG - chr5.1:57103518-57103537 MS.gene67236:CDS 25.0%
! ATAAGCATTTATTGCATGTT+TGG - chr5.1:57102751-57102770 MS.gene67236:intron 25.0%
! ATATTTGTAAACTGCAATCA+TGG + chr5.1:57104380-57104399 None:intergenic 25.0%
! ATTGATATTGAAGAATTCTC+AGG + chr5.1:57103696-57103715 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG - chr5.1:57101828-57101847 MS.gene67236:CDS 25.0%
! GAGAATTCTTCAATATCAAT+TGG - chr5.1:57103696-57103715 MS.gene67236:CDS 25.0%
! GATGATAATAACAATTCAAG+GGG - chr5.1:57101830-57101849 MS.gene67236:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG - chr5.1:57103519-57103538 MS.gene67236:CDS 25.0%
! TAATGCTGTTACTGAATTTA+TGG - chr5.1:57102486-57102505 MS.gene67236:intron 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG + chr5.1:57102319-57102338 None:intergenic 25.0%
! TATTTGTAAACTGCAATCAT+GGG + chr5.1:57104379-57104398 None:intergenic 25.0%
! TTTATGTTGAAGTAAAATGC+AGG - chr5.1:57103922-57103941 MS.gene67236:intron 25.0%
! TTTCATCATCTATGTTTCAT+GGG - chr5.1:57102121-57102140 MS.gene67236:CDS 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG - chr5.1:57103095-57103114 MS.gene67236:intron 25.0%
!! ACTGCAATTTAAAACTACTA+TGG - chr5.1:57104008-57104027 MS.gene67236:intron 25.0%
!! ATTTCATTGATTGGATTAAC+AGG + chr5.1:57103618-57103637 None:intergenic 25.0%
!! ATTTGTTCTCTATCTGTTTT+AGG - chr5.1:57104446-57104465 MS.gene67236:CDS 25.0%
!! GTGTTTAATTTATGACTTGT+AGG - chr5.1:57104827-57104846 MS.gene67236:intron 25.0%
!! TGCATTTTACTTCAACATAA+AGG + chr5.1:57103923-57103942 None:intergenic 25.0%
!! TTAATTTGAGTATCCAATGA+TGG - chr5.1:57104342-57104361 MS.gene67236:CDS 25.0%
!! TTTTCATCATCTATGTTTCA+TGG - chr5.1:57102120-57102139 MS.gene67236:CDS 25.0%
!!! AAGATTGTTTGTTTTGTGTT+TGG - chr5.1:57102228-57102247 MS.gene67236:intron 25.0%
!!! CACATTATTTTTGTTGGATT+TGG + chr5.1:57103062-57103081 None:intergenic 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG - chr5.1:57104477-57104496 MS.gene67236:CDS 25.0%
!!! GTTGATCACATTATTTTTGT+TGG + chr5.1:57103068-57103087 None:intergenic 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG - chr5.1:57102160-57102179 MS.gene67236:CDS 25.0%
!!! TTTCTAATTTGGCTATTTCT+TGG - chr5.1:57104542-57104561 MS.gene67236:intron 25.0%
AAAGTTGAGAGATCAATTGA+GGG - chr5.1:57103492-57103511 MS.gene67236:CDS 30.0%
AAGGAAATTATGGATTCTCA+AGG - chr5.1:57105127-57105146 MS.gene67236:CDS 30.0%
AATTGGATGAACAATTCTGA+GGG - chr5.1:57102594-57102613 MS.gene67236:intron 30.0%
ATATGGACAAAAGCAAGTTA+AGG - chr5.1:57103410-57103429 MS.gene67236:CDS 30.0%
ATATGGACAGAAAGTTGTTA+AGG - chr5.1:57104227-57104246 MS.gene67236:intron 30.0%
ATGTTCTTAAATTGCTGATG+CGG - chr5.1:57103874-57103893 MS.gene67236:intron 30.0%
GAAAAATGAAGGTGAAAATG+AGG - chr5.1:57104101-57104120 MS.gene67236:intron 30.0%
GCTAAGAAAAGTTTGAACAA+AGG - chr5.1:57102274-57102293 MS.gene67236:intron 30.0%
TATGGACAAAAGCAAGTTAA+GGG - chr5.1:57103411-57103430 MS.gene67236:CDS 30.0%
TATGGACAGAAAGTTGTTAA+GGG - chr5.1:57104228-57104247 MS.gene67236:intron 30.0%
TGATCATGGATTTCATTGAT+TGG + chr5.1:57103627-57103646 None:intergenic 30.0%
TGATGATTGAAAAGTTGTTG+TGG + chr5.1:57102691-57102710 None:intergenic 30.0%
TGTAGTCAGTACATTATTGA+CGG - chr5.1:57102895-57102914 MS.gene67236:CDS 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG + chr5.1:57104529-57104548 None:intergenic 30.0%
TTCAAAACATCGATGATCAT+TGG + chr5.1:57103021-57103040 None:intergenic 30.0%
TTGAGAATCCATAATTTCCT+TGG + chr5.1:57105128-57105147 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG - chr5.1:57102696-57102715 MS.gene67236:intron 30.0%
! ACTTTTTACCACATTTGACT+AGG + chr5.1:57104405-57104424 None:intergenic 30.0%
! CTCAAGGTTTGATAATCAAA+TGG - chr5.1:57105143-57105162 MS.gene67236:CDS 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG - chr5.1:57104531-57104550 MS.gene67236:intron 30.0%
AAATCCAAACAATGGAGCAA+TGG - chr5.1:57105023-57105042 MS.gene67236:intron 35.0%
AACAAGTGACATTGATATCC+TGG - chr5.1:57104182-57104201 MS.gene67236:intron 35.0%
AACCCTTCAAATCCAAACAA+TGG - chr5.1:57105015-57105034 MS.gene67236:intron 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG + chr5.1:57101908-57101927 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG + chr5.1:57101907-57101926 None:intergenic 35.0%
ATAAAACACCGACACAGAAA+CGG + chr5.1:57104780-57104799 None:intergenic 35.0%
ATTGGATGAACAATTCTGAG+GGG - chr5.1:57102595-57102614 MS.gene67236:intron 35.0%
CAACAACAAATGGCTGAAAA+TGG - chr5.1:57105198-57105217 MS.gene67236:CDS 35.0%
CAATTGGATGAACAATTCTG+AGG - chr5.1:57102593-57102612 MS.gene67236:intron 35.0%
CTCCATTGTTTGGATTTGAA+GGG + chr5.1:57105020-57105039 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG + chr5.1:57103483-57103502 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG - chr5.1:57103491-57103510 MS.gene67236:CDS 35.0%
GGAATAGCAAAGTAAGAAGA+AGG + chr5.1:57101917-57101936 None:intergenic 35.0%
GGATACAATTGGCGAAAATA+TGG - chr5.1:57103393-57103412 MS.gene67236:CDS 35.0%
GTCTGATTGAAATCCATTGT+TGG + chr5.1:57103313-57103332 None:intergenic 35.0%
GTGCATTTGTAGTAACTTCT+CGG + chr5.1:57103447-57103466 None:intergenic 35.0%
TAGCCAAATTAGAAAAGGCA+AGG + chr5.1:57104537-57104556 None:intergenic 35.0%
TCAAGGAACATGTCATCTTT+AGG + chr5.1:57105249-57105268 None:intergenic 35.0%
TCATATGCATCACATGGTAA+TGG - chr5.1:57103648-57103667 MS.gene67236:CDS 35.0%
TCTTCTTAGTAGGACAGTTA+GGG + chr5.1:57103473-57103492 None:intergenic 35.0%
TGTATCCATCATCTGATCTT+CGG + chr5.1:57103380-57103399 None:intergenic 35.0%
TTAAGGGAAATCCAAATCCA+AGG - chr5.1:57104244-57104263 MS.gene67236:intron 35.0%
TTCTTCTTAGTAGGACAGTT+AGG + chr5.1:57103474-57103493 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG + chr5.1:57101974-57101993 None:intergenic 35.0%
TTTCAATCATCAACTGTTGG+TGG - chr5.1:57102699-57102718 MS.gene67236:intron 35.0%
TTTGGATTTGAAGGGTTGTT+TGG + chr5.1:57105012-57105031 None:intergenic 35.0%
! ATTTACCATCTTTTAGCCTC+AGG + chr5.1:57103801-57103820 None:intergenic 35.0%
! CTTTTCAAACCCAACAACAA+GGG - chr5.1:57102646-57102665 MS.gene67236:intron 35.0%
! TCTTTTCAAACCCAACAACA+AGG - chr5.1:57102645-57102664 MS.gene67236:intron 35.0%
! TGGTGATGAATTTGATGAAG+AGG - chr5.1:57103773-57103792 MS.gene67236:CDS 35.0%
!! AAATCCATTGTTGGTGTTGT+TGG + chr5.1:57103304-57103323 None:intergenic 35.0%
!! ATCACATGGTAATGGACAAA+TGG - chr5.1:57103656-57103675 MS.gene67236:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr5.1:57103382-57103401 MS.gene67236:CDS 35.0%
!! GGCTATTTCTTGGTCAAATT+TGG - chr5.1:57104552-57104571 MS.gene67236:intron 35.0%
!! TGCTGTTGTTGATTCATGTA+AGG + chr5.1:57105171-57105190 None:intergenic 35.0%
AACGTGCCTCACATGATTTA+AGG - chr5.1:57104899-57104918 MS.gene67236:intron 40.0%
AAGGCAAGGAAAATTGGTAC+AGG + chr5.1:57104523-57104542 None:intergenic 40.0%
AAGTAAAATGCAGGCTGATG+CGG - chr5.1:57103931-57103950 MS.gene67236:intron 40.0%
ACACAGAAACGGACATAACA+TGG + chr5.1:57104769-57104788 None:intergenic 40.0%
ACGTGCCTCACATGATTTAA+GGG - chr5.1:57104900-57104919 MS.gene67236:intron 40.0%
ATCATCTGATCTTCGGCTTA+AGG + chr5.1:57103373-57103392 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG - chr5.1:57103587-57103606 MS.gene67236:CDS 40.0%
ATTCAACCTTCAAATGCTGC+AGG - chr5.1:57105101-57105120 MS.gene67236:CDS 40.0%
ATTTGATGAAGAGGAACCTG+AGG - chr5.1:57103782-57103801 MS.gene67236:CDS 40.0%
CAAACCAACAACACCAACAA+TGG - chr5.1:57103297-57103316 MS.gene67236:CDS 40.0%
CATATCTGTCAGTGTCATGT+CGG + chr5.1:57104675-57104694 None:intergenic 40.0%
CTGCTCAAAGCAACTACAAT+TGG - chr5.1:57102577-57102596 MS.gene67236:intron 40.0%
GACATTGATATCCTGGATGA+TGG - chr5.1:57104189-57104208 MS.gene67236:intron 40.0%
GACTGTCCAATCTAGACTAA+TGG + chr5.1:57102922-57102941 None:intergenic 40.0%
GATCAGTCATATGCATCACA+TGG - chr5.1:57103642-57103661 MS.gene67236:CDS 40.0%
GCATAACAGGAGAATCAAGA+AGG + chr5.1:57101961-57101980 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG + chr5.1:57105021-57105040 None:intergenic 40.0%
GCTGTGATCACAACTTATGA+GGG - chr5.1:57104922-57104941 MS.gene67236:intron 40.0%
GGTTACAGATGGAGGAAATA+TGG - chr5.1:57104210-57104229 MS.gene67236:intron 40.0%
GTAAGAAGAAGGAGAAACAG+GGG + chr5.1:57101906-57101925 None:intergenic 40.0%
GTGATGCATATGACTGATCA+TGG + chr5.1:57103641-57103660 None:intergenic 40.0%
GTTGTCTGAACTACAACTCT+AGG + chr5.1:57104165-57104184 None:intergenic 40.0%
GTTTGAACACTAGCAATCTC+AGG + chr5.1:57103282-57103301 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG + chr5.1:57101905-57101924 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG - chr5.1:57103163-57103182 MS.gene67236:intron 40.0%
TGCAGCATTTGAAGGTTGAA+TGG + chr5.1:57105102-57105121 None:intergenic 40.0%
TGTTATGTCCGTTTCTGTGT+CGG - chr5.1:57104769-57104788 MS.gene67236:intron 40.0%
TTAAGCCGAAGATCAGATGA+TGG - chr5.1:57103372-57103391 MS.gene67236:CDS 40.0%
TTCAACCTTCAAATGCTGCA+GGG - chr5.1:57105102-57105121 MS.gene67236:CDS 40.0%
TTGAATGGTGATTGTCCTTG+AGG + chr5.1:57105087-57105106 None:intergenic 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG + chr5.1:57105006-57105025 None:intergenic 40.0%
! ATTTTGCCATCACCTACAAC+TGG - chr5.1:57102546-57102565 MS.gene67236:intron 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG + chr5.1:57101860-57101879 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG - chr5.1:57101920-57101939 MS.gene67236:CDS 40.0%
AAACTGCAATCATGGGAGTG+AGG + chr5.1:57104372-57104391 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG - chr5.1:57105031-57105050 MS.gene67236:intron 45.0%
AGGAACCTGAGGCTAAAAGA+TGG - chr5.1:57103793-57103812 MS.gene67236:CDS 45.0%
ATGCTAAGCCTCAATGCACA+AGG - chr5.1:57103553-57103572 MS.gene67236:CDS 45.0%
ATGGCCATTGCTCCATTGTT+TGG + chr5.1:57105030-57105049 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG + chr5.1:57104908-57104927 None:intergenic 45.0%
CAGCAGAAGGAGAAGCTAAA+AGG + chr5.1:57101802-57101821 None:intergenic 45.0%
CGACATCACAACTGCAATTG+CGG + chr5.1:57103957-57103976 None:intergenic 45.0%
CGACATGACACTGACAGATA+TGG - chr5.1:57104673-57104692 MS.gene67236:intron 45.0%
CTTCGGCTTAAGGTTTGAGT+TGG + chr5.1:57103363-57103382 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG + chr5.1:57101952-57101971 None:intergenic 45.0%
GAGTTTCTCCTTGTGCATTG+AGG + chr5.1:57103564-57103583 None:intergenic 45.0%
GCAGCAGCAACAACAACAAA+TGG - chr5.1:57105188-57105207 MS.gene67236:CDS 45.0%
GGAGTGAGGAAATCCATCAT+TGG + chr5.1:57104358-57104377 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG - chr5.1:57104921-57104940 MS.gene67236:intron 45.0%
GGGGAATCAGCAAATGAGAA+AGG - chr5.1:57102614-57102633 MS.gene67236:intron 45.0%
GTGACAAAGGCAAAGAAGGA+GGG + chr5.1:57101880-57101899 None:intergenic 45.0%
TCATCTGAAGAAGCAGCAGA+AGG + chr5.1:57101815-57101834 None:intergenic 45.0%
TCCATCTGTAACCATCATCC+AGG + chr5.1:57104203-57104222 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG + chr5.1:57104141-57104160 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG + chr5.1:57101879-57101898 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG - chr5.1:57103733-57103752 MS.gene67236:CDS 45.0%
! AAAGCACCAGTTGTAGGTGA+TGG + chr5.1:57102555-57102574 None:intergenic 45.0%
! GACGGTCCATTAGTCTAGAT+TGG - chr5.1:57102913-57102932 MS.gene67236:CDS 45.0%
! GCATTGGTCTGTTCACAGAA+TGG + chr5.1:57104990-57105009 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG - chr5.1:57104199-57104218 MS.gene67236:intron 45.0%
! TGGATGATGGTTACAGATGG+AGG - chr5.1:57104202-57104221 MS.gene67236:intron 45.0%
!! AAGGTTTGAGTTGGTTGCTG+TGG + chr5.1:57103354-57103373 None:intergenic 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG + chr5.1:57105229-57105248 None:intergenic 45.0%
!! TGGTTTCTCCTCTAGAGCTA+AGG - chr5.1:57105218-57105237 MS.gene67236:CDS 45.0%
CTGCAGGGCCAAGGAAATTA+TGG - chr5.1:57105117-57105136 MS.gene67236:CDS 50.0%
GACAAAGGCAAAGAAGGAGG+GGG + chr5.1:57101878-57101897 None:intergenic 50.0%
GCTTCCTCACTGGACAGTTA+GGG + chr5.1:57104873-57104892 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG + chr5.1:57101953-57101972 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG + chr5.1:57101884-57101903 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG + chr5.1:57101881-57101900 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG - chr5.1:57105049-57105068 MS.gene67236:intron 50.0%
TCTCACCAAAGGAGTCGATC+TGG - chr5.1:57103744-57103763 MS.gene67236:CDS 50.0%
TGCTTCCTCACTGGACAGTT+AGG + chr5.1:57104874-57104893 None:intergenic 50.0%
TTGCTGTGGTTGCTGGTAAC+TGG + chr5.1:57103340-57103359 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG + chr5.1:57105049-57105068 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+AGG + chr5.1:57102561-57102580 None:intergenic 50.0%
AGGTCAGCAGGGCTTAAACC+AGG + chr5.1:57101941-57101960 None:intergenic 55.0%
CACACCCTAACTGTCCAGTG+AGG - chr5.1:57104866-57104885 MS.gene67236:intron 55.0%
CACCAAAGGAGTCGATCTGG+TGG - chr5.1:57103747-57103766 MS.gene67236:CDS 55.0%
CGTTCGACATGCTTCCTCAC+TGG + chr5.1:57104883-57104902 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG - chr5.1:57105108-57105127 MS.gene67236:CDS 55.0%
CTTGGCCCTGCAGCATTTGA+AGG + chr5.1:57105110-57105129 None:intergenic 55.0%
GAAACAGGGGGAGGTGACAA+AGG + chr5.1:57101893-57101912 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG + chr5.1:57101902-57101921 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG + chr5.1:57102672-57102691 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG + chr5.1:57101938-57101957 None:intergenic 55.0%
! CACCACCAGATCGACTCCTT+TGG + chr5.1:57103752-57103771 None:intergenic 55.0%
! GAGTTGGTTGCTGTGGTTGC+TGG + chr5.1:57103347-57103366 None:intergenic 55.0%
! TGTCCTTGAGGTGCTTGCTG+TGG + chr5.1:57105075-57105094 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG + chr5.1:57105057-57105076 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG + chr5.1:57102658-57102677 None:intergenic 55.0%
AGGCCACAGCAAGCACCTCA+AGG - chr5.1:57105069-57105088 MS.gene67236:CDS 60.0%
CTTCCACTTCCACGAGCAGC+GGG + chr5.1:57104967-57104986 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG + chr5.1:57104968-57104987 None:intergenic 60.0%
TTCCACTTCCACGAGCAGCG+GGG + chr5.1:57104966-57104985 None:intergenic 60.0%
! AGGAGTCGATCTGGTGGTGC+TGG - chr5.1:57103753-57103772 MS.gene67236:CDS 60.0%
! CAGCAGCAGGCCCTTGTTGT+TGG + chr5.1:57102659-57102678 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG + chr5.1:57104957-57104976 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG - chr5.1:57104955-57104974 MS.gene67236:intron 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG - chr5.1:57104961-57104980 MS.gene67236:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 57101779 57105284 57101779 ID=MS.gene67236
chr5.1 mRNA 57101779 57105284 57101779 ID=MS.gene67236.t1;Parent=MS.gene67236
chr5.1 exon 57105069 57105284 57105069 ID=MS.gene67236.t1.exon1;Parent=MS.gene67236.t1
chr5.1 CDS 57105069 57105284 57105069 ID=cds.MS.gene67236.t1;Parent=MS.gene67236.t1
chr5.1 exon 57104332 57104517 57104332 ID=MS.gene67236.t1.exon2;Parent=MS.gene67236.t1
chr5.1 CDS 57104332 57104517 57104332 ID=cds.MS.gene67236.t1;Parent=MS.gene67236.t1
chr5.1 exon 57103249 57103889 57103249 ID=MS.gene67236.t1.exon3;Parent=MS.gene67236.t1
chr5.1 CDS 57103249 57103889 57103249 ID=cds.MS.gene67236.t1;Parent=MS.gene67236.t1
chr5.1 exon 57102798 57102962 57102798 ID=MS.gene67236.t1.exon4;Parent=MS.gene67236.t1
chr5.1 CDS 57102798 57102962 57102798 ID=cds.MS.gene67236.t1;Parent=MS.gene67236.t1
chr5.1 exon 57101779 57102214 57101779 ID=MS.gene67236.t1.exon5;Parent=MS.gene67236.t1
chr5.1 CDS 57101779 57102214 57101779 ID=cds.MS.gene67236.t1;Parent=MS.gene67236.t1
Gene Sequence

>MS.gene67236

ATGTCAACAACTTTCTCTGACCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATGTTAGTTTCTTTCATTTTCTTCACTTTTTTGTTTGATATTTTTTTCAGTGTTTTTTGTTTGTTTTTGTTTTAAGAGAGTAAAGTTTTGAACTTTATTTGTTTTTTTTGACATGGGTTGTCTTTGTTTTTCATCATCTATGTTTCATGGGTTTGATGATAAACAAGTGAAGTTTGAACATGTTTTTTGGTTTTTGTTTTTGTTTTTGACAGAAAACATGTTTTTTGTTGTTGTTAAGATTGTTTGTTTTGTGTTTGGTTTTGTTGACTATGATTTTTTATGCTAAGAAAAGTTTGAACAAAGGAAAGTTTAGACTTTTTTTTCCTTTTTTTACAAGAGTTGACTAAATAATTAATTTGATTTTTTTGACATATGTTCAATGGTTTTGATGTTGAAGAAGAGCTTTTCATTTATTTTTAATCAATTGAAGGTTGAATATGAACATGCTTTAGTTTTTTTTTTTTGTTGGTGATTTTTGTTTCTTTGTCTATTTTAATGCTGTTACTGAATTTATGGGCATGTGTCAATATTGTTTTTGTTTGTTTTGATGCAGATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAAGTATGTTGTAACCAATTTTATAAGCATTTATTGCATGTTTGGATTATTTGTATGTTAAGCTGAGTTACTGTATGTGATTGTGATTTAACAAAAGCTAAGCTTTACTTTTGAGATTAAAAAAATTGAAGTTGGATTTGTTGCACTTACAAATGTCACACATTCATGTAGTCAGTACATTATTGACGGTCCATTAGTCTAGATTGGACAGTCTAGATTGCAAGTTTAGAATTTTGCGATTTAATATTTAATCAAAATGCGCTTTCTTTCTGCACTGTTTGATCTTGATCCAATGATCATCGATGTTTTGAAGTTATGACTAGAACTAATCCAAATCCAACAAAAATAATGTGATCAACTTTTTGAACCTATGTCTTTTATCTTATTGGTTTTTGAAATGAAAAAGTTATTTTCTCTAAAAATGTTCAACTTTTTCATGTAACAGCAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCTTCTGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAGTTACCAGCAACCACAGCAACCAACTCAAACCTTAAGCCGAAGATCAGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGAAGTTACTACAAATGCACTTACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATTGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCTGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCTGAGGCTAAAAGATGGTAAATTTTTTATTTTATTTCAACACTTGGCACCATAAATATGATTCAATGTTTTGTTGATGTTCTTAAATTGCTGATGCGGTCGCAATTTTATTATGTCACGAGCCTTTATGTTGAAGTAAAATGCAGGCTGATGCGGCCGCAATTGCAGTTGTGATGTCGTTGCTCATATATTATTATATTGTGGTTGTGGACTGCAATTTAAAACTACTATGGTCTTGTCTTGATATATTCATTTATGTAGGTTTTATTTCATGGCTAATTTAAGTTTACATAAAATTTTCAGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGTAAAAAAATAACTAACTTTATGTTTACTTCTTGAAATTTATACAGTTTTGAAGTTCTTTTAAAAAGTACTACTAGTTAATTTGAGTATCCAATGATGGATTTCCTCACTCCCATGATTGCAGTTTACAAATATTACCTAGTCAAATGTGGTAAAAAGTTACAATTGTGTAATGAATTGTATTTGTTCTCTATCTGTTTTAGGTGCTTTAGCATTATTGCTTGTTTCTTTTTGGAAACTCTACTATAGATTAAACCTGTACCAATTTTCCTTGCCTTTTCTAATTTGGCTATTTCTTGGTCAAATTTGGTAACTATGATATTCTCAAATTTGCATGCTATCTAGAAAAAGAATAGTAGTTCTAGACTATATATCACATACACTTCAAATTGAACATGTGTGTGACGCCGACATGACACTGACAGATATGGTTACATATAGTTATTTCATTTTCTCAAATTATTATCAACGTTGACTTGTTGTTAGTGTCTGTGTCTGTGTCCATGTTATGTCCGTTTCTGTGTCGGTGTTTTATATGTTCTAGATTGTGTTATCTAATTTTGTGTTTAATTTATGACTTGTAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAGCATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAGCAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCAAGGTTTGATAATCAAATGGTGCCTTACATGAATCAACAACAGCAGCAGCAACAACAACAAATGGCTGAAAATGGTTTCTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTCCTTGAATCTTTGCTTTGCTGA
Protein sequence

>MS.gene67236.t1

MSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSSYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC