Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67286.t1 | KEH25768.1 | 85.2 | 331 | 49 | 0 | 1 | 331 | 1 | 331 | 1.00E-154 | 556.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67286.t1 | Q9SAG4 | 28.2 | 294 | 172 | 7 | 19 | 308 | 52 | 310 | 9.3e-16 | 85.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67286.t1 | A0A072U9L4 | 85.2 | 331 | 49 | 0 | 1 | 331 | 1 | 331 | 7.3e-155 | 556.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54960 | MS.gene67286 | PPI |
| MS.gene67286 | MS.gene01653 | PPI |
| MS.gene67286 | MS.gene024262 | PPI |
| MS.gene67286 | MS.gene51793 | PPI |
| MS.gene67286 | MS.gene033694 | PPI |
| MS.gene67286 | MS.gene045772 | PPI |
| MS.gene67286 | MS.gene51795 | PPI |
| MS.gene047137 | MS.gene67286 | PPI |
| MS.gene67286 | MS.gene072003 | PPI |
| MS.gene67286 | MS.gene002112 | PPI |
| MS.gene67286 | MS.gene047136 | PPI |
| MS.gene67286 | MS.gene065373 | PPI |
| MS.gene67286 | MS.gene033695 | PPI |
| MS.gene67286 | MS.gene54959 | PPI |
| MS.gene67286 | MS.gene071257 | PPI |
| MS.gene67286 | MS.gene072000 | PPI |
| MS.gene67286 | MS.gene78164 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67286.t1 | MTR_6g034190 | 85.196 | 331 | 49 | 0 | 1 | 331 | 1 | 331 | 0.0 | 577 |
| MS.gene67286.t1 | MTR_2g070780 | 53.824 | 340 | 142 | 3 | 1 | 331 | 1 | 334 | 5.88e-113 | 332 |
| MS.gene67286.t1 | MTR_2g072240 | 54.740 | 327 | 131 | 5 | 11 | 330 | 4 | 320 | 2.56e-112 | 333 |
| MS.gene67286.t1 | MTR_2g071700 | 52.454 | 326 | 137 | 4 | 18 | 331 | 19 | 338 | 2.74e-101 | 301 |
| MS.gene67286.t1 | MTR_2g070660 | 38.384 | 198 | 87 | 4 | 1 | 196 | 1 | 165 | 2.21e-31 | 116 |
| MS.gene67286.t1 | MTR_1g016310 | 26.740 | 273 | 141 | 8 | 3 | 265 | 7 | 230 | 1.23e-13 | 71.2 |
| MS.gene67286.t1 | MTR_1g016310 | 26.740 | 273 | 141 | 8 | 3 | 265 | 7 | 230 | 2.08e-13 | 70.9 |
| MS.gene67286.t1 | MTR_2g070820 | 55.000 | 60 | 19 | 1 | 280 | 331 | 1 | 60 | 5.94e-13 | 65.5 |
| MS.gene67286.t1 | MTR_1g013580 | 25.000 | 268 | 151 | 9 | 1 | 261 | 1 | 225 | 1.65e-11 | 65.1 |
| MS.gene67286.t1 | MTR_0743s0010 | 42.623 | 61 | 35 | 0 | 13 | 73 | 11 | 71 | 1.84e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67286.t1 | AT1G80960 | 28.231 | 294 | 172 | 7 | 19 | 308 | 13 | 271 | 8.54e-19 | 87.0 |
| MS.gene67286.t1 | AT1G80960 | 28.231 | 294 | 172 | 7 | 19 | 308 | 52 | 310 | 9.07e-19 | 87.0 |
| MS.gene67286.t1 | AT1G80960 | 28.289 | 304 | 176 | 8 | 19 | 318 | 52 | 317 | 9.88e-19 | 86.7 |
| MS.gene67286.t1 | AT1G80960 | 28.231 | 294 | 172 | 7 | 19 | 308 | 52 | 310 | 1.00e-18 | 87.0 |
| MS.gene67286.t1 | AT1G80960 | 28.231 | 294 | 172 | 7 | 19 | 308 | 52 | 310 | 1.00e-18 | 87.0 |
| MS.gene67286.t1 | AT1G80960 | 28.231 | 294 | 172 | 7 | 19 | 308 | 52 | 310 | 1.00e-18 | 87.0 |
| MS.gene67286.t1 | AT3G44810 | 27.059 | 255 | 137 | 10 | 19 | 266 | 9 | 221 | 4.38e-11 | 63.9 |
| MS.gene67286.t1 | AT5G18780 | 25.000 | 308 | 172 | 14 | 6 | 298 | 2 | 265 | 4.48e-11 | 63.9 |
| MS.gene67286.t1 | AT5G18780 | 25.000 | 308 | 172 | 14 | 6 | 298 | 2 | 265 | 4.48e-11 | 63.9 |
| MS.gene67286.t1 | AT5G18780 | 25.424 | 295 | 163 | 13 | 19 | 298 | 13 | 265 | 8.68e-11 | 63.2 |
| MS.gene67286.t1 | AT5G18780 | 25.424 | 295 | 163 | 13 | 19 | 298 | 13 | 265 | 8.68e-11 | 63.2 |
Find 51 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGAAATCACATTTATTA+AGG | 0.192778 | 6.2:+24757948 | None:intergenic |
| TCCCTTGCACGGCGAGTTAT+TGG | 0.219472 | 6.2:+24758786 | None:intergenic |
| AAGCTGTAATATTCGACATT+TGG | 0.278791 | 6.2:-24758299 | MS.gene67286:CDS |
| AATGCTTCAATATTTGTCTT+TGG | 0.298181 | 6.2:+24758838 | None:intergenic |
| GCACGGAGGATATAAAGTTT+TGG | 0.321853 | 6.2:+24757776 | None:intergenic |
| TGAAATTTGTGGTGGCATTA+TGG | 0.322727 | 6.2:-24757702 | None:intergenic |
| AGCTGTAATATTCGACATTT+GGG | 0.343909 | 6.2:-24758298 | MS.gene67286:CDS |
| TCCAACTTTGCATTATCTTC+AGG | 0.361121 | 6.2:+24758385 | None:intergenic |
| TTTGTCTTTGGTCAAAACTA+AGG | 0.374750 | 6.2:+24758850 | None:intergenic |
| CTTAATAAATGTGATTTCTC+TGG | 0.377879 | 6.2:-24757947 | MS.gene67286:CDS |
| AGAGAAATCACATTTATTAA+GGG | 0.394672 | 6.2:+24757949 | None:intergenic |
| TCAAAACCTGGTTGAGATCA+AGG | 0.397664 | 6.2:+24758056 | None:intergenic |
| CGGGCAAGATAGACGAACTT+TGG | 0.404187 | 6.2:-24758152 | MS.gene67286:CDS |
| AGGGACATTATTGAAATTTG+TGG | 0.417808 | 6.2:-24757713 | MS.gene67286:CDS |
| ATCTTTATGAATAGAAATGA+TGG | 0.441341 | 6.2:+24757814 | None:intergenic |
| TCCTGAAGATAATGCAAAGT+TGG | 0.447683 | 6.2:-24758386 | MS.gene67286:CDS |
| AATTGAGAAAGGGGTGGTAA+AGG | 0.457097 | 6.2:-24758230 | MS.gene67286:CDS |
| AAACTAGTGAAAACCTCAAA+AGG | 0.471505 | 6.2:+24758124 | None:intergenic |
| ATAAAAGTTAGAAGTACATC+AGG | 0.475341 | 6.2:+24758957 | None:intergenic |
| ATGAAGAAATTAATTGAGAA+AGG | 0.477964 | 6.2:-24758241 | MS.gene67286:CDS |
| GGGGTGGTAAAGGTTTCAAT+TGG | 0.478107 | 6.2:-24758220 | MS.gene67286:CDS |
| TTCAACACACACTTCATTGA+GGG | 0.487816 | 6.2:+24758024 | None:intergenic |
| TGAAGAAATTAATTGAGAAA+GGG | 0.489006 | 6.2:-24758240 | MS.gene67286:CDS |
| CTAGTGTGCTTTCCAATCGT+TGG | 0.489038 | 6.2:-24758899 | MS.gene67286:CDS |
| TGCACGGCGAGTTATTGGTT+CGG | 0.493921 | 6.2:+24758791 | None:intergenic |
| AATCACATTTATTAAGGGTG+AGG | 0.498335 | 6.2:+24757954 | None:intergenic |
| TTGGGTATGAGTTGTGTCAA+TGG | 0.506616 | 6.2:-24758280 | MS.gene67286:CDS |
| TATGAAAGTGCAAAAGATGT+TGG | 0.507676 | 6.2:-24757873 | MS.gene67286:CDS |
| CAAAACCTGGTTGAGATCAA+GGG | 0.512705 | 6.2:+24758057 | None:intergenic |
| GTTGGTTTCTGCAGCTAACA+TGG | 0.516040 | 6.2:-24757855 | MS.gene67286:CDS |
| AACCAATAACTCGCCGTGCA+AGG | 0.516433 | 6.2:-24758788 | MS.gene67286:CDS |
| ACCAATAACTCGCCGTGCAA+GGG | 0.518356 | 6.2:-24758787 | MS.gene67286:CDS |
| TTTAATGTGAAATAGATTCG+TGG | 0.520261 | 6.2:-24758415 | MS.gene67286:intron |
| TGCAAGGGATGTTCGTCCTA+AGG | 0.524559 | 6.2:-24758772 | MS.gene67286:intron |
| CAATCATAGATAAACACATT+GGG | 0.525328 | 6.2:-24758330 | MS.gene67286:CDS |
| GAAGAAATTAATTGAGAAAG+GGG | 0.538436 | 6.2:-24758239 | MS.gene67286:CDS |
| GACATTATTGAAATTTGTGG+TGG | 0.547549 | 6.2:-24757710 | MS.gene67286:CDS |
| AATAAATGTGATTTCTCTGG+AGG | 0.548519 | 6.2:-24757944 | MS.gene67286:CDS |
| CCAATCGTTGGAAAACATTG+TGG | 0.560442 | 6.2:-24758887 | MS.gene67286:CDS |
| ATTCAACACACACTTCATTG+AGG | 0.560971 | 6.2:+24758023 | None:intergenic |
| TTGGGCAATATTTGAGAACA+AGG | 0.577286 | 6.2:-24757733 | MS.gene67286:CDS |
| ACCTTCCCTTGATCTCAACC+AGG | 0.578543 | 6.2:-24758062 | MS.gene67286:CDS |
| TCAATCATAGATAAACACAT+TGG | 0.600536 | 6.2:-24758331 | MS.gene67286:CDS |
| GAAATTAATTGAGAAAGGGG+TGG | 0.635769 | 6.2:-24758236 | MS.gene67286:CDS |
| TGGGCAATATTTGAGAACAA+GGG | 0.636609 | 6.2:-24757732 | MS.gene67286:CDS |
| TATGATTGACATGATTAACA+TGG | 0.651938 | 6.2:+24758345 | None:intergenic |
| ACCTGGTTGAGATCAAGGGA+AGG | 0.653409 | 6.2:+24758061 | None:intergenic |
| TAGGACGAACATCCCTTGCA+CGG | 0.661668 | 6.2:+24758775 | None:intergenic |
| TCAATGGAGATGTTGTGCGG+TGG | 0.696201 | 6.2:-24758264 | MS.gene67286:CDS |
| TAACATCATTATAAGCACGG+AGG | 0.721649 | 6.2:+24757762 | None:intergenic |
| GTGTCAATGGAGATGTTGTG+CGG | 0.728030 | 6.2:-24758267 | MS.gene67286:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAATTAGATTAATTAAA+TGG | - | chr6.2:24758181-24758200 | MS.gene67286:CDS | 10.0% |
| !!! | AAACTAAGTTATATTATTTT+CGG | - | chr6.2:24758554-24758573 | MS.gene67286:intron | 10.0% |
| !!! | ATTTATGATTTGATTTTTTT+GGG | - | chr6.2:24758083-24758102 | MS.gene67286:CDS | 10.0% |
| !!! | TCTCAAATATTTTAAAATTT+TGG | - | chr6.2:24758829-24758848 | MS.gene67286:CDS | 10.0% |
| !! | ATAAAAATTGAAACAAAATC+TGG | + | chr6.2:24758258-24758277 | None:intergenic | 15.0% |
| !!! | AACTAAGTTATATTATTTTC+GGG | - | chr6.2:24758555-24758574 | MS.gene67286:intron | 15.0% |
| !!! | ATATTTTTTTGAGATTCATT+TGG | - | chr6.2:24758209-24758228 | MS.gene67286:CDS | 15.0% |
| !!! | ATTTTTATCTTATAGGTTTT+AGG | - | chr6.2:24758006-24758025 | MS.gene67286:CDS | 15.0% |
| !!! | GATTTATGATTTGATTTTTT+TGG | - | chr6.2:24758082-24758101 | MS.gene67286:CDS | 15.0% |
| !!! | TAGTTTTTCAAAATAATCAT+GGG | + | chr6.2:24758540-24758559 | None:intergenic | 15.0% |
| !!! | TCTACAAATTTTTATCTTAT+AGG | - | chr6.2:24757999-24758018 | MS.gene67286:CDS | 15.0% |
| !!! | TTAGTTTTTCAAAATAATCA+TGG | + | chr6.2:24758541-24758560 | None:intergenic | 15.0% |
| !! | AGAGAAATCACATTTATTAA+GGG | + | chr6.2:24758780-24758799 | None:intergenic | 20.0% |
| !! | ATAATGATGTTAAAAAGCTT+GGG | - | chr6.2:24758975-24758994 | MS.gene67286:CDS | 20.0% |
| !! | ATCTTTATGAATAGAAATGA+TGG | + | chr6.2:24758915-24758934 | None:intergenic | 20.0% |
| !! | ATGAAGAAATTAATTGAGAA+AGG | - | chr6.2:24758485-24758504 | MS.gene67286:intron | 20.0% |
| !! | GAATCTATTTCACATTAAAA+AGG | + | chr6.2:24758310-24758329 | None:intergenic | 20.0% |
| !! | TATAATGATGTTAAAAAGCT+TGG | - | chr6.2:24758974-24758993 | MS.gene67286:CDS | 20.0% |
| !! | TGAAGAAATTAATTGAGAAA+GGG | - | chr6.2:24758486-24758505 | MS.gene67286:intron | 20.0% |
| !!! | TTTTAACATCATTATAAGCA+CGG | + | chr6.2:24758970-24758989 | None:intergenic | 20.0% |
| ! | AATGCTTCAATATTTGTCTT+TGG | + | chr6.2:24757891-24757910 | None:intergenic | 25.0% |
| ! | CAATCATAGATAAACACATT+GGG | - | chr6.2:24758396-24758415 | MS.gene67286:CDS | 25.0% |
| ! | CAGAGAAATCACATTTATTA+AGG | + | chr6.2:24758781-24758800 | None:intergenic | 25.0% |
| ! | CTTAATAAATGTGATTTCTC+TGG | - | chr6.2:24758779-24758798 | MS.gene67286:CDS | 25.0% |
| ! | GAAGAAATTAATTGAGAAAG+GGG | - | chr6.2:24758487-24758506 | MS.gene67286:intron | 25.0% |
| ! | TACAAGCCATTAAATTAATC+TGG | - | chr6.2:24758139-24758158 | MS.gene67286:CDS | 25.0% |
| ! | TATGATTGACATGATTAACA+TGG | + | chr6.2:24758384-24758403 | None:intergenic | 25.0% |
| ! | TCAATCATAGATAAACACAT+TGG | - | chr6.2:24758395-24758414 | MS.gene67286:CDS | 25.0% |
| ! | TTTAATGTGAAATAGATTCG+TGG | - | chr6.2:24758311-24758330 | MS.gene67286:CDS | 25.0% |
| !! | ATAAAAGTTAGAAGTACATC+AGG | + | chr6.2:24757772-24757791 | None:intergenic | 25.0% |
| !! | CGAATATTACAGCTTTTTAA+AGG | + | chr6.2:24758422-24758441 | None:intergenic | 25.0% |
| !! | GATTAATTTAATGGCTTGTA+CGG | + | chr6.2:24758139-24758158 | None:intergenic | 25.0% |
| !!! | GTTTTAGGATCTATGATTTT+TGG | - | chr6.2:24758021-24758040 | MS.gene67286:CDS | 25.0% |
| AAACTAGTGAAAACCTCAAA+AGG | + | chr6.2:24758605-24758624 | None:intergenic | 30.0% | |
| AAAGAAAAAAATGCGAGCTA+TGG | - | chr6.2:24757717-24757736 | MS.gene67286:CDS | 30.0% | |
| AAGCTGTAATATTCGACATT+TGG | - | chr6.2:24758427-24758446 | MS.gene67286:intron | 30.0% | |
| AATAAATGTGATTTCTCTGG+AGG | - | chr6.2:24758782-24758801 | MS.gene67286:CDS | 30.0% | |
| AATCACATTTATTAAGGGTG+AGG | + | chr6.2:24758775-24758794 | None:intergenic | 30.0% | |
| AGCTGTAATATTCGACATTT+GGG | - | chr6.2:24758428-24758447 | MS.gene67286:intron | 30.0% | |
| AGGGACATTATTGAAATTTG+TGG | - | chr6.2:24759013-24759032 | MS.gene67286:CDS | 30.0% | |
| CTCGATCCAGATTAATTTAA+TGG | + | chr6.2:24758148-24758167 | None:intergenic | 30.0% | |
| GACATTATTGAAATTTGTGG+TGG | - | chr6.2:24759016-24759035 | MS.gene67286:CDS | 30.0% | |
| TTTGTCTTTGGTCAAAACTA+AGG | + | chr6.2:24757879-24757898 | None:intergenic | 30.0% | |
| ! | AACTTTGGATTTACCTTTTG+AGG | - | chr6.2:24758589-24758608 | MS.gene67286:intron | 30.0% |
| ! | TACATCTAAGATTGTACCTT+AGG | + | chr6.2:24757973-24757992 | None:intergenic | 30.0% |
| ! | TATGAAAGTGCAAAAGATGT+TGG | - | chr6.2:24758853-24758872 | MS.gene67286:CDS | 30.0% |
| !!! | GATCTATGATTTTTGGTTCA+TGG | - | chr6.2:24758028-24758047 | MS.gene67286:CDS | 30.0% |
| !!! | GATTTGATTTTTTTGGGATC+TGG | - | chr6.2:24758089-24758108 | MS.gene67286:CDS | 30.0% |
| !!! | TTTTTGAGATTCATTTGGAG+AGG | - | chr6.2:24758214-24758233 | MS.gene67286:CDS | 30.0% |
| ATCTGGAAATTCGATTCTTG+TGG | + | chr6.2:24758241-24758260 | None:intergenic | 35.0% | |
| ATTCAACACACACTTCATTG+AGG | + | chr6.2:24758706-24758725 | None:intergenic | 35.0% | |
| GAAATTAATTGAGAAAGGGG+TGG | - | chr6.2:24758490-24758509 | MS.gene67286:intron | 35.0% | |
| TAACATCATTATAAGCACGG+AGG | + | chr6.2:24758967-24758986 | None:intergenic | 35.0% | |
| TCCAACTTTGCATTATCTTC+AGG | + | chr6.2:24758344-24758363 | None:intergenic | 35.0% | |
| TCCTGAAGATAATGCAAAGT+TGG | - | chr6.2:24758340-24758359 | MS.gene67286:CDS | 35.0% | |
| TGGGCAATATTTGAGAACAA+GGG | - | chr6.2:24758994-24759013 | MS.gene67286:CDS | 35.0% | |
| TTCAACACACACTTCATTGA+GGG | + | chr6.2:24758705-24758724 | None:intergenic | 35.0% | |
| TTGGGCAATATTTGAGAACA+AGG | - | chr6.2:24758993-24759012 | MS.gene67286:CDS | 35.0% | |
| ! | AATTTAATGGCTTGTACGGA+GGG | + | chr6.2:24758135-24758154 | None:intergenic | 35.0% |
| ! | AATTTCTTTTCTGTCAGTCG+AGG | - | chr6.2:24757792-24757811 | MS.gene67286:CDS | 35.0% |
| ! | ACGGAGGATATAAAGTTTTG+GGG | + | chr6.2:24758951-24758970 | None:intergenic | 35.0% |
| ! | CACGGAGGATATAAAGTTTT+GGG | + | chr6.2:24758952-24758971 | None:intergenic | 35.0% |
| ! | TAATTTAATGGCTTGTACGG+AGG | + | chr6.2:24758136-24758155 | None:intergenic | 35.0% |
| !!! | TGAGGTTTTCACTAGTTTTG+AGG | - | chr6.2:24758607-24758626 | MS.gene67286:intron | 35.0% |
| AATTGAGAAAGGGGTGGTAA+AGG | - | chr6.2:24758496-24758515 | MS.gene67286:intron | 40.0% | |
| CAAAACCTGGTTGAGATCAA+GGG | + | chr6.2:24758672-24758691 | None:intergenic | 40.0% | |
| CCAATCGTTGGAAAACATTG+TGG | - | chr6.2:24757839-24757858 | MS.gene67286:CDS | 40.0% | |
| GAAAAAAATGCGAGCTATGG+AGG | - | chr6.2:24757720-24757739 | MS.gene67286:CDS | 40.0% | |
| TCAAAACCTGGTTGAGATCA+AGG | + | chr6.2:24758673-24758692 | None:intergenic | 40.0% | |
| TTGGGTATGAGTTGTGTCAA+TGG | - | chr6.2:24758446-24758465 | MS.gene67286:intron | 40.0% | |
| ! | ATTTAATGGCTTGTACGGAG+GGG | + | chr6.2:24758134-24758153 | None:intergenic | 40.0% |
| ! | CCACAATGTTTTCCAACGAT+TGG | + | chr6.2:24757842-24757861 | None:intergenic | 40.0% |
| ! | GCACGGAGGATATAAAGTTT+TGG | + | chr6.2:24758953-24758972 | None:intergenic | 40.0% |
| ! | GGGTAAGAGTTTTCAAAACC+TGG | + | chr6.2:24758685-24758704 | None:intergenic | 40.0% |
| !!! | TTTTGGGATCTGGTCCTTTT+TGG | - | chr6.2:24758099-24758118 | MS.gene67286:CDS | 40.0% |
| CTAGTGTGCTTTCCAATCGT+TGG | - | chr6.2:24757827-24757846 | MS.gene67286:CDS | 45.0% | |
| GGGGTGGTAAAGGTTTCAAT+TGG | - | chr6.2:24758506-24758525 | MS.gene67286:intron | 45.0% | |
| GTGTCAATGGAGATGTTGTG+CGG | - | chr6.2:24758459-24758478 | MS.gene67286:intron | 45.0% | |
| ! | GTTGGTTTCTGCAGCTAACA+TGG | - | chr6.2:24758871-24758890 | MS.gene67286:CDS | 45.0% |
| ! | TTTAATGGCTTGTACGGAGG+GGG | + | chr6.2:24758133-24758152 | None:intergenic | 45.0% |
| AACCAATAACTCGCCGTGCA+AGG | - | chr6.2:24757938-24757957 | MS.gene67286:CDS | 50.0% | |
| ACCAATAACTCGCCGTGCAA+GGG | - | chr6.2:24757939-24757958 | MS.gene67286:CDS | 50.0% | |
| ACCTGGTTGAGATCAAGGGA+AGG | + | chr6.2:24758668-24758687 | None:intergenic | 50.0% | |
| ACCTTCCCTTGATCTCAACC+AGG | - | chr6.2:24758664-24758683 | MS.gene67286:intron | 50.0% | |
| CGGGCAAGATAGACGAACTT+TGG | - | chr6.2:24758574-24758593 | MS.gene67286:intron | 50.0% | |
| TAGGACGAACATCCCTTGCA+CGG | + | chr6.2:24757954-24757973 | None:intergenic | 50.0% | |
| TCAATGGAGATGTTGTGCGG+TGG | - | chr6.2:24758462-24758481 | MS.gene67286:intron | 50.0% | |
| TGCAAGGGATGTTCGTCCTA+AGG | - | chr6.2:24757954-24757973 | MS.gene67286:CDS | 50.0% | |
| ! | TGCACGGCGAGTTATTGGTT+CGG | + | chr6.2:24757938-24757957 | None:intergenic | 50.0% |
| TCCCTTGCACGGCGAGTTAT+TGG | + | chr6.2:24757943-24757962 | None:intergenic | 55.0% | |
| AGGGGGTGGAGGGACCAAAA+AGG | + | chr6.2:24758116-24758135 | None:intergenic | 60.0% | |
| ! | AATGGCTTGTACGGAGGGGG+TGG | + | chr6.2:24758130-24758149 | None:intergenic | 60.0% |
| GCTTGTACGGAGGGGGTGGA+GGG | + | chr6.2:24758126-24758145 | None:intergenic | 65.0% | |
| GGCTTGTACGGAGGGGGTGG+AGG | + | chr6.2:24758127-24758146 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 24757703 | 24759045 | 24757703 | ID=MS.gene67286 |
| chr6.2 | mRNA | 24757703 | 24759045 | 24757703 | ID=MS.gene67286.t1;Parent=MS.gene67286 |
| chr6.2 | exon | 24758773 | 24759045 | 24758773 | ID=MS.gene67286.t1.exon1;Parent=MS.gene67286.t1 |
| chr6.2 | CDS | 24758773 | 24759045 | 24758773 | ID=cds.MS.gene67286.t1;Parent=MS.gene67286.t1 |
| chr6.2 | exon | 24757703 | 24758422 | 24757703 | ID=MS.gene67286.t1.exon2;Parent=MS.gene67286.t1 |
| chr6.2 | CDS | 24757703 | 24758422 | 24757703 | ID=cds.MS.gene67286.t1;Parent=MS.gene67286.t1 |
| Gene Sequence |
| Protein sequence |
