Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71819.t1 | XP_003592638.2 | 99.5 | 788 | 4 | 0 | 12 | 799 | 7 | 794 | 0.00E+00 | 1594.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71819.t1 | P52780 | 86.9 | 786 | 102 | 1 | 14 | 799 | 10 | 794 | 0.0e+00 | 1403.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71819.t1 | G7ICA2 | 99.5 | 788 | 4 | 0 | 12 | 799 | 7 | 794 | 0.0e+00 | 1594.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene71819 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene050681 | MS.gene71819 | 0.814202 | 1.74E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene71819 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene71819 | 0.841636 | 4.21E-58 | -1.69E-46 |
| MS.gene052609 | MS.gene71819 | 0.865588 | 5.30E-65 | -1.69E-46 |
| MS.gene053143 | MS.gene71819 | 0.847127 | 1.41E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene71819 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene71819 | 0.805619 | 1.22E-49 | -1.69E-46 |
| MS.gene054585 | MS.gene71819 | 0.801843 | 7.44E-49 | -1.69E-46 |
| MS.gene054824 | MS.gene71819 | 0.8308 | 2.40E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene71819 | 0.820365 | 7.13E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene71819 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene056507 | MS.gene71819 | 0.849222 | 3.71E-60 | -1.69E-46 |
| MS.gene058638 | MS.gene71819 | 0.803333 | 3.66E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene71819 | 0.805789 | 1.13E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene71819 | 0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene71819 | 0.81644 | 5.53E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80766 | MS.gene71819 | PPI |
| MS.gene030099 | MS.gene71819 | PPI |
| MS.gene065875 | MS.gene71819 | PPI |
| MS.gene052373 | MS.gene71819 | PPI |
| MS.gene037771 | MS.gene71819 | PPI |
| MS.gene061256 | MS.gene71819 | PPI |
| MS.gene26848 | MS.gene71819 | PPI |
| MS.gene031761 | MS.gene71819 | PPI |
| MS.gene68406 | MS.gene71819 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71819.t1 | MTR_1g110430 | 99.492 | 788 | 4 | 0 | 12 | 799 | 7 | 794 | 0.0 | 1625 |
| MS.gene71819.t1 | MTR_1g085150 | 32.271 | 502 | 323 | 7 | 274 | 774 | 225 | 710 | 1.35e-67 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71819.t1 | AT1G25350 | 76.239 | 787 | 184 | 2 | 16 | 799 | 9 | 795 | 0.0 | 1265 |
| MS.gene71819.t1 | AT1G25350 | 74.747 | 792 | 192 | 3 | 16 | 799 | 9 | 800 | 0.0 | 1241 |
| MS.gene71819.t1 | AT5G26710 | 33.665 | 502 | 316 | 9 | 274 | 774 | 212 | 697 | 1.11e-70 | 246 |
| MS.gene71819.t1 | AT5G19720 | 56.923 | 195 | 58 | 2 | 606 | 799 | 1 | 170 | 1.11e-67 | 221 |
| MS.gene71819.t1 | AT1G68325 | 58.904 | 73 | 23 | 1 | 726 | 798 | 31 | 96 | 7.57e-22 | 91.3 |
Find 174 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGCGATGTTTATTGATTT+TGG | 0.078301 | 1.3:+75145042 | MS.gene71819:intron |
| ATAACTTCAGTGCACTTTAT+AGG | 0.185994 | 1.3:-75152481 | None:intergenic |
| AGATTCAATGATTCTGAAAT+TGG | 0.239159 | 1.3:-75147008 | None:intergenic |
| TGAAGTATTTGAGGAGAATA+AGG | 0.245021 | 1.3:+75143770 | MS.gene71819:CDS |
| CCTTATTGCATATCGAATTA+AGG | 0.252842 | 1.3:+75147124 | MS.gene71819:CDS |
| TATAATTTACCGTGTAAATA+AGG | 0.262860 | 1.3:-75142422 | None:intergenic |
| ATGAGACTATTCTTGAAATT+CGG | 0.263391 | 1.3:+75152518 | MS.gene71819:CDS |
| CGGCTAAATCATACAATTCT+TGG | 0.286989 | 1.3:-75146501 | None:intergenic |
| CCTAATGGATATTTGCATAT+TGG | 0.298235 | 1.3:+75144920 | MS.gene71819:CDS |
| CTATAGTAAGGGTGGAAAAT+AGG | 0.314797 | 1.3:+75153149 | MS.gene71819:CDS |
| TGAGACTATTCTTGAAATTC+GGG | 0.346853 | 1.3:+75152519 | MS.gene71819:CDS |
| AGAATAGTACCATCGCTAAA+AGG | 0.349411 | 1.3:-75144815 | None:intergenic |
| CCTTAATTCGATATGCAATA+AGG | 0.350425 | 1.3:-75147124 | None:intergenic |
| CTGAGGAGATAAAGGAGTAT+AGG | 0.353345 | 1.3:+75146952 | MS.gene71819:CDS |
| CGGTTTCCTCCCGAGCCTAA+TGG | 0.353730 | 1.3:+75144905 | MS.gene71819:CDS |
| TGAGGAGATAAAGGAGTATA+GGG | 0.362415 | 1.3:+75146953 | MS.gene71819:CDS |
| TTGAAGTCAGGCTGTTTGAT+AGG | 0.371366 | 1.3:+75152717 | MS.gene71819:CDS |
| TTGATAGGGTGTTCTCCATT+GGG | 0.373984 | 1.3:+75152658 | MS.gene71819:intron |
| GGATCATCAGCTTGGGCATC+AGG | 0.376841 | 1.3:-75151089 | None:intergenic |
| CGCGCCGTGCTTCATACTAT+TGG | 0.385788 | 1.3:+75147945 | MS.gene71819:CDS |
| ATTGATAGGGTGTTCTCCAT+TGG | 0.386993 | 1.3:+75152657 | MS.gene71819:intron |
| GTATTTACCAACCTTATGTA+TGG | 0.387845 | 1.3:+75147984 | MS.gene71819:CDS |
| GAGGTAATTCCAAATGCATT+TGG | 0.388200 | 1.3:+75152906 | MS.gene71819:CDS |
| TATTGGTTGTTGCATGCATT+AGG | 0.389406 | 1.3:+75147962 | MS.gene71819:CDS |
| TGATGACATTAGCTGGTTTA+CGG | 0.390710 | 1.3:+75148204 | MS.gene71819:CDS |
| TTGTGCTTATGTTGATCATC+AGG | 0.392938 | 1.3:+75146543 | MS.gene71819:CDS |
| CTTCCCTAACATGATATTCA+AGG | 0.397704 | 1.3:-75150882 | None:intergenic |
| AATGGATTGAGATCTTCTTC+TGG | 0.398450 | 1.3:-75144337 | None:intergenic |
| AATATATACAACGTTGGAAA+AGG | 0.399492 | 1.3:-75152297 | None:intergenic |
| CATTACCTAATCTTTCAAAC+TGG | 0.409686 | 1.3:-75152968 | None:intergenic |
| TGCAAAATTATATGAGCTAC+TGG | 0.410648 | 1.3:+75144121 | MS.gene71819:CDS |
| AAAGATTCAAAAGATTATTA+CGG | 0.410890 | 1.3:+75152341 | MS.gene71819:CDS |
| AGCTGTTAATGAAGTATTTG+AGG | 0.411819 | 1.3:+75143761 | MS.gene71819:CDS |
| TTACTAGTTGGTGAGTTACT+TGG | 0.414784 | 1.3:+75143941 | MS.gene71819:intron |
| CACTCCGTGATGCAAAAGTT+GGG | 0.415700 | 1.3:+75152937 | MS.gene71819:CDS |
| ACCGCATCGACCAACATTGC+TGG | 0.416551 | 1.3:+75142970 | MS.gene71819:CDS |
| GAGGGCAGACCAAATGCATT+TGG | 0.419936 | 1.3:-75152915 | None:intergenic |
| ATTTCTTGCCAATACGGGTT+CGG | 0.420438 | 1.3:+75143245 | MS.gene71819:CDS |
| ACTATCATTTCTTGCCAATA+CGG | 0.420572 | 1.3:+75143239 | MS.gene71819:CDS |
| GTCGCCTTGAATATCATGTT+AGG | 0.427051 | 1.3:+75150878 | MS.gene71819:CDS |
| GTAGACACCTGAGGAGATAA+AGG | 0.427662 | 1.3:+75146944 | MS.gene71819:intron |
| CTATACTCCTTTATCTCCTC+AGG | 0.428879 | 1.3:-75146951 | None:intergenic |
| CGATGCGGTAAGGCATTTCC+AGG | 0.432226 | 1.3:-75142956 | None:intergenic |
| GACAAGCATTTGAAAGCAAC+AGG | 0.432915 | 1.3:+75144866 | MS.gene71819:CDS |
| CTTGAATATTCCCATACATA+AGG | 0.434106 | 1.3:-75147995 | None:intergenic |
| AGTTTCCAGTTTGAAAGATT+AGG | 0.434602 | 1.3:+75152963 | MS.gene71819:CDS |
| ACGTGCGAAAGAGGCTTCCA+TGG | 0.435748 | 1.3:+75143966 | MS.gene71819:CDS |
| CTTCAAATTTATTCACATCC+AGG | 0.441234 | 1.3:-75143272 | None:intergenic |
| GATTATTACGGCCTTGCTCC+TGG | 0.443530 | 1.3:+75152353 | MS.gene71819:CDS |
| CCAATATGCAAATATCCATT+AGG | 0.445438 | 1.3:-75144920 | None:intergenic |
| AAACTCACCTCTACTTTAGC+AGG | 0.448864 | 1.3:-75144197 | None:intergenic |
| ATGAGAAAGTAAAACAAGAA+TGG | 0.449030 | 1.3:-75142075 | None:intergenic |
| ATCCTGCCGAACTTGACAAT+TGG | 0.449418 | 1.3:+75152856 | MS.gene71819:CDS |
| CTTATGTATGGGAATATTCA+AGG | 0.450934 | 1.3:+75147996 | MS.gene71819:CDS |
| TCCATTGAAGCTTAATCGCC+TGG | 0.452017 | 1.3:+75148142 | MS.gene71819:intron |
| TTTGAAGAAGCGTGTGGAGT+TGG | 0.453075 | 1.3:+75143288 | MS.gene71819:CDS |
| TCACTCCGTGATGCAAAAGT+TGG | 0.455130 | 1.3:+75152936 | MS.gene71819:CDS |
| CAGTGAGCATAATCATAACT+TGG | 0.456666 | 1.3:-75147263 | None:intergenic |
| AAAGATAACCAACCTCTGAT+AGG | 0.457491 | 1.3:-75152745 | None:intergenic |
| TAACAGAACTGTCACATTGA+AGG | 0.458470 | 1.3:+75153122 | MS.gene71819:CDS |
| GAACTACGCTATCGAACAAA+TGG | 0.464729 | 1.3:+75143804 | MS.gene71819:CDS |
| ATCCATTGAAGGTTGAAGTC+AGG | 0.465275 | 1.3:+75152705 | MS.gene71819:CDS |
| ATTGAAGGACAGCTATAGTA+AGG | 0.465317 | 1.3:+75153137 | MS.gene71819:CDS |
| GCCAAGCCAATTGTCAAGTT+CGG | 0.467361 | 1.3:-75152862 | None:intergenic |
| AGCCTGACTTCAACCTTCAA+TGG | 0.471327 | 1.3:-75152707 | None:intergenic |
| TGAGAAAGTAAAACAAGAAT+GGG | 0.472854 | 1.3:-75142074 | None:intergenic |
| GTTACCGAAAAGTGGGTTGA+TGG | 0.476547 | 1.3:+75148164 | MS.gene71819:CDS |
| CTATCATTTCTTGCCAATAC+GGG | 0.481213 | 1.3:+75143240 | MS.gene71819:CDS |
| CCTCGCCTGATGACATTAGC+TGG | 0.482367 | 1.3:+75148197 | MS.gene71819:CDS |
| TACTTGGGCACGTGCGAAAG+AGG | 0.484463 | 1.3:+75143957 | MS.gene71819:CDS |
| GAAATTGGTCTGTCCCTCCA+TGG | 0.485714 | 1.3:-75146993 | None:intergenic |
| GCCGAACTTGACAATTGGCT+TGG | 0.487061 | 1.3:+75152861 | MS.gene71819:CDS |
| AGCCAATTGTCAAGTTCGGC+AGG | 0.490419 | 1.3:-75152858 | None:intergenic |
| AATGGATCAACTTCATGAGC+AGG | 0.491526 | 1.3:-75152689 | None:intergenic |
| TGATAGGCTGTTCCTATCAG+AGG | 0.496046 | 1.3:+75152733 | MS.gene71819:CDS |
| TGAAGAAATTGTCCAGTGGA+TGG | 0.496361 | 1.3:+75146363 | MS.gene71819:CDS |
| GGTGACTTTGTTATTAGCAA+TGG | 0.497008 | 1.3:-75142334 | None:intergenic |
| TGCAAATATCCATTAGGCTC+GGG | 0.498380 | 1.3:-75144914 | None:intergenic |
| AGCAGATGGATCATCAGCTT+GGG | 0.498557 | 1.3:-75151096 | None:intergenic |
| TGAAGCTAACTCAACAATTG+AGG | 0.500307 | 1.3:+75151049 | MS.gene71819:CDS |
| CAATACGGGTTCGGAAAACC+TGG | 0.501361 | 1.3:+75143254 | MS.gene71819:CDS |
| ATATATACAACGTTGGAAAA+GGG | 0.501618 | 1.3:-75152296 | None:intergenic |
| GTAAACCAGCTAATGTCATC+AGG | 0.504398 | 1.3:-75148202 | None:intergenic |
| AACGGCAGCCTCGTGGATAA+CGG | 0.508840 | 1.3:-75142370 | None:intergenic |
| TACTAGTTGGTGAGTTACTT+GGG | 0.509631 | 1.3:+75143942 | MS.gene71819:intron |
| TTTACTCCGCACCCTCATGC+TGG | 0.516515 | 1.3:+75147221 | MS.gene71819:CDS |
| CTGAGTATCGCAGATTTGCC+AGG | 0.517883 | 1.3:-75152371 | None:intergenic |
| AAGCAGATGGATCATCAGCT+TGG | 0.520046 | 1.3:-75151097 | None:intergenic |
| TCATGAAGTTGATCCATTGA+AGG | 0.520442 | 1.3:+75152694 | MS.gene71819:CDS |
| ATCGCCTGGTTACCGAAAAG+TGG | 0.520705 | 1.3:+75148156 | MS.gene71819:CDS |
| TTGTCTCCAGCATGAGGGTG+CGG | 0.520931 | 1.3:-75147227 | None:intergenic |
| TAGCTGGTTTACGGCGTAGA+GGG | 0.525572 | 1.3:+75148213 | MS.gene71819:CDS |
| GAGGAATTGGAATCACTAGA+AGG | 0.525621 | 1.3:+75148267 | MS.gene71819:CDS |
| ACCCTCATGCTGGAGACAAA+TGG | 0.525756 | 1.3:+75147231 | MS.gene71819:CDS |
| ATGGTTTCCATCCCATCCAC+TGG | 0.525936 | 1.3:-75146375 | None:intergenic |
| GTGGATAACGGTGGTGAGAT+TGG | 0.526746 | 1.3:-75142358 | None:intergenic |
| CAATGTTGGTCGATGCGGTA+AGG | 0.527243 | 1.3:-75142966 | None:intergenic |
| ATGCAAATATCCATTAGGCT+CGG | 0.528175 | 1.3:-75144915 | None:intergenic |
| CGTTGTATATATTGAACGTA+CGG | 0.530723 | 1.3:+75152307 | MS.gene71819:CDS |
| TAGTCCAGAGGAAAATTTGA+AGG | 0.536130 | 1.3:+75144372 | MS.gene71819:CDS |
| AGAAGAAATTGAACAGTCCA+TGG | 0.538575 | 1.3:+75146976 | MS.gene71819:CDS |
| AATATTCCCATACATAAGGT+TGG | 0.540298 | 1.3:-75147991 | None:intergenic |
| TATTTACCAACCTTATGTAT+GGG | 0.540656 | 1.3:+75147985 | MS.gene71819:CDS |
| TCGCCTTGAATATCATGTTA+GGG | 0.540818 | 1.3:+75150879 | MS.gene71819:CDS |
| CAAAACAGCTCCTCGAACAA+TGG | 0.541666 | 1.3:+75150912 | MS.gene71819:CDS |
| TCGTGTGCAGCCATCGGTAA+CGG | 0.543327 | 1.3:-75142388 | None:intergenic |
| CGAAAAGTGGGTTGATGGGT+GGG | 0.548227 | 1.3:+75148169 | MS.gene71819:CDS |
| AACAGTTCGTGTGCAGCCAT+CGG | 0.550809 | 1.3:-75142394 | None:intergenic |
| AGACGTGGTCTTGTAGAAGA+AGG | 0.551914 | 1.3:+75147044 | MS.gene71819:CDS |
| ACAACATATTCCAGCAATGT+TGG | 0.552257 | 1.3:-75142980 | None:intergenic |
| GATGGCTGCACACGAACTGT+TGG | 0.552677 | 1.3:+75142396 | MS.gene71819:CDS |
| CTGGCAAATCTGCGATACTC+AGG | 0.553968 | 1.3:+75152372 | MS.gene71819:CDS |
| CACTGTTATGTCGAAGCGCA+AGG | 0.554048 | 1.3:+75148033 | MS.gene71819:CDS |
| CCGAAAAGTGGGTTGATGGG+TGG | 0.554800 | 1.3:+75148168 | MS.gene71819:CDS |
| CACGAGGCTGCCGTTACCGA+TGG | 0.559303 | 1.3:+75142378 | MS.gene71819:CDS |
| GGTTGTCTTGCACCCACTCA+AGG | 0.560414 | 1.3:+75150933 | MS.gene71819:CDS |
| GGCTGATGCAAAAGCTGTCA+AGG | 0.561646 | 1.3:+75143988 | MS.gene71819:CDS |
| TGTTGGAAACCTTATTTACA+CGG | 0.564262 | 1.3:+75142413 | MS.gene71819:CDS |
| TCTGAACCCTCATTCAAAAG+AGG | 0.564421 | 1.3:+75152887 | MS.gene71819:CDS |
| GGATTGAGATCTTCTTCTGG+TGG | 0.565763 | 1.3:-75144334 | None:intergenic |
| CGTGCGAAAGAGGCTTCCAT+GGG | 0.566216 | 1.3:+75143967 | MS.gene71819:CDS |
| AACAGACAAAATACCTTGAG+TGG | 0.566641 | 1.3:-75150946 | None:intergenic |
| GATGGGATGGAAACCATTCA+AGG | 0.570675 | 1.3:+75146381 | MS.gene71819:CDS |
| ATTACCTTGTAGAAAGCAGA+TGG | 0.572394 | 1.3:-75151110 | None:intergenic |
| TCCAGCAATGTTGGTCGATG+CGG | 0.576314 | 1.3:-75142971 | None:intergenic |
| TGATCCATCTGCTTTCTACA+AGG | 0.576675 | 1.3:+75151106 | MS.gene71819:CDS |
| TGCAAGACAACCATTGTTCG+AGG | 0.578367 | 1.3:-75150922 | None:intergenic |
| CACCATTTGTCTCCAGCATG+AGG | 0.578697 | 1.3:-75147233 | None:intergenic |
| GAAGGAAGATATCTTAGAGA+AGG | 0.581067 | 1.3:+75142254 | MS.gene71819:intron |
| TGATATATGTGCAGGTGTTG+AGG | 0.586897 | 1.3:+75143716 | MS.gene71819:intron |
| TCGCCTGGTTACCGAAAAGT+GGG | 0.588105 | 1.3:+75148157 | MS.gene71819:CDS |
| GAGCAGGTTGTGCAACCCAA+TGG | 0.588412 | 1.3:-75152673 | None:intergenic |
| TTACCGAAAAGTGGGTTGAT+GGG | 0.590330 | 1.3:+75148165 | MS.gene71819:CDS |
| GGAATATGTTGTTTCATCCA+AGG | 0.591177 | 1.3:+75142991 | MS.gene71819:CDS |
| AAATTGTCCAGTGGATGGGA+TGG | 0.593412 | 1.3:+75146368 | MS.gene71819:CDS |
| TTTGCATATTGGTCATGCCA+AGG | 0.597648 | 1.3:+75144931 | MS.gene71819:CDS |
| TCGCAGATTTGCCAGGAGCA+AGG | 0.603339 | 1.3:-75152364 | None:intergenic |
| GCCGTGGAGCTCATAAGAAG+AGG | 0.606247 | 1.3:+75146520 | MS.gene71819:CDS |
| AAGGACAGCTATAGTAAGGG+TGG | 0.606859 | 1.3:+75153141 | MS.gene71819:CDS |
| GTCTTGCTTCATTCGCAGTG+TGG | 0.607399 | 1.3:-75147072 | None:intergenic |
| GAAGAAATTGTCCAGTGGAT+GGG | 0.608057 | 1.3:+75146364 | MS.gene71819:CDS |
| AGAGAAACCTGCTAAAGTAG+AGG | 0.608147 | 1.3:+75144190 | MS.gene71819:CDS |
| GAAATTGAACAGTCCATGGA+GGG | 0.611407 | 1.3:+75146980 | MS.gene71819:CDS |
| AATAAATTTGAAGAAGCGTG+TGG | 0.620386 | 1.3:+75143282 | MS.gene71819:CDS |
| TTTGATATTCCCTAGTCCAG+AGG | 0.621334 | 1.3:+75144360 | MS.gene71819:CDS |
| AGTGAGCATAATCATAACTT+GGG | 0.623564 | 1.3:-75147262 | None:intergenic |
| GGGTTGGCAAAAGACAGAGA+TGG | 0.630895 | 1.3:+75145063 | MS.gene71819:CDS |
| AAGCATTTGAAAGCAACAGG+TGG | 0.630979 | 1.3:+75144869 | MS.gene71819:CDS |
| ACCATTTGTCTCCAGCATGA+GGG | 0.632136 | 1.3:-75147232 | None:intergenic |
| GAGATGGAGGTTGCTACCTG+AGG | 0.632641 | 1.3:+75145079 | MS.gene71819:CDS |
| CAGGTTGCAACAAAATACCC+TGG | 0.634042 | 1.3:+75142938 | MS.gene71819:intron |
| ACTCCGTGATGCAAAAGTTG+GGG | 0.634974 | 1.3:+75152938 | MS.gene71819:CDS |
| AGCATTTGAAAGCAACAGGT+GGG | 0.637401 | 1.3:+75144870 | MS.gene71819:CDS |
| CATCGGTAACGGCAGCCTCG+TGG | 0.638213 | 1.3:-75142377 | None:intergenic |
| ACCTCTTCTTATGAGCTCCA+CGG | 0.641721 | 1.3:-75146521 | None:intergenic |
| AAATATCCATTAGGCTCGGG+AGG | 0.644834 | 1.3:-75144911 | None:intergenic |
| CCAGCTAATGTCATCAGGCG+AGG | 0.651747 | 1.3:-75148197 | None:intergenic |
| ACAACCAATAGTATGAAGCA+CGG | 0.653300 | 1.3:-75147949 | None:intergenic |
| TTGGCAAAAGACAGAGATGG+AGG | 0.655596 | 1.3:+75145066 | MS.gene71819:CDS |
| TTGAAGGACAGCTATAGTAA+GGG | 0.656111 | 1.3:+75153138 | MS.gene71819:CDS |
| ACAGACAAAATACCTTGAGT+GGG | 0.656269 | 1.3:-75150945 | None:intergenic |
| TTAGCTGGTTTACGGCGTAG+AGG | 0.660909 | 1.3:+75148212 | MS.gene71819:CDS |
| AGAATTGTATGATTTAGCCG+TGG | 0.661708 | 1.3:+75146504 | MS.gene71819:CDS |
| GATAACGGTGGTGAGATTGG+TGG | 0.665187 | 1.3:-75142355 | None:intergenic |
| TGATTATGCTCACTGCATCG+TGG | 0.676182 | 1.3:+75147271 | MS.gene71819:CDS |
| AGAAATTGAACAGTCCATGG+AGG | 0.677303 | 1.3:+75146979 | MS.gene71819:CDS |
| ACGTTCAATATATACAACGT+TGG | 0.685014 | 1.3:-75152303 | None:intergenic |
| ATCATTGCAGGTGAAAACAA+CGG | 0.687951 | 1.3:+75143200 | MS.gene71819:intron |
| GATGCGGTAAGGCATTTCCA+GGG | 0.696093 | 1.3:-75142955 | None:intergenic |
| ACATTGAAGAAATTGTCCAG+TGG | 0.705711 | 1.3:+75146359 | MS.gene71819:CDS |
| GCAAAATTATATGAGCTACT+GGG | 0.716316 | 1.3:+75144122 | MS.gene71819:CDS |
| GGCAGCCTCGTGGATAACGG+TGG | 0.717487 | 1.3:-75142367 | None:intergenic |
| GATTTGGTTGTAGACACCTG+AGG | 0.739238 | 1.3:+75146935 | MS.gene71819:intron |
| TCTCACCACCGTTATCCACG+AGG | 0.746654 | 1.3:+75142362 | MS.gene71819:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75142070 | 75153170 | 75142070 | ID=MS.gene71819 |
| chr1.3 | mRNA | 75142070 | 75153170 | 75142070 | ID=MS.gene71819.t1;Parent=MS.gene71819 |
| chr1.3 | exon | 75142070 | 75142100 | 75142070 | ID=MS.gene71819.t1.exon1;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75142070 | 75142100 | 75142070 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75142262 | 75142434 | 75142262 | ID=MS.gene71819.t1.exon2;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75142262 | 75142434 | 75142262 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75142941 | 75143012 | 75142941 | ID=MS.gene71819.t1.exon3;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75142941 | 75143012 | 75142941 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75143210 | 75143309 | 75143210 | ID=MS.gene71819.t1.exon4;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75143210 | 75143309 | 75143210 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75143730 | 75143825 | 75143730 | ID=MS.gene71819.t1.exon5;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75143730 | 75143825 | 75143730 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75143948 | 75144009 | 75143948 | ID=MS.gene71819.t1.exon6;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75143948 | 75144009 | 75143948 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75144110 | 75144211 | 75144110 | ID=MS.gene71819.t1.exon7;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75144110 | 75144211 | 75144110 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75144301 | 75144393 | 75144301 | ID=MS.gene71819.t1.exon8;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75144301 | 75144393 | 75144301 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75144800 | 75144952 | 75144800 | ID=MS.gene71819.t1.exon9;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75144800 | 75144952 | 75144800 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75145045 | 75145100 | 75145045 | ID=MS.gene71819.t1.exon10;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75145045 | 75145100 | 75145045 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75146312 | 75146402 | 75146312 | ID=MS.gene71819.t1.exon11;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75146312 | 75146402 | 75146312 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75146478 | 75146564 | 75146478 | ID=MS.gene71819.t1.exon12;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75146478 | 75146564 | 75146478 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75146948 | 75147145 | 75146948 | ID=MS.gene71819.t1.exon13;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75146948 | 75147145 | 75146948 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75147221 | 75147319 | 75147221 | ID=MS.gene71819.t1.exon14;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75147221 | 75147319 | 75147221 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75147923 | 75148054 | 75147923 | ID=MS.gene71819.t1.exon15;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75147923 | 75148054 | 75147923 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75148152 | 75148288 | 75148152 | ID=MS.gene71819.t1.exon16;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75148152 | 75148288 | 75148152 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75150855 | 75150954 | 75150855 | ID=MS.gene71819.t1.exon17;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75150855 | 75150954 | 75150855 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75151032 | 75151127 | 75151032 | ID=MS.gene71819.t1.exon18;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75151032 | 75151127 | 75151032 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75152293 | 75152393 | 75152293 | ID=MS.gene71819.t1.exon19;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75152293 | 75152393 | 75152293 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75152471 | 75152576 | 75152471 | ID=MS.gene71819.t1.exon20;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75152471 | 75152576 | 75152471 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75152665 | 75152754 | 75152665 | ID=MS.gene71819.t1.exon21;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75152665 | 75152754 | 75152665 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75152855 | 75152984 | 75152855 | ID=MS.gene71819.t1.exon22;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75152855 | 75152984 | 75152855 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| chr1.3 | exon | 75153076 | 75153170 | 75153076 | ID=MS.gene71819.t1.exon23;Parent=MS.gene71819.t1 |
| chr1.3 | CDS | 75153076 | 75153170 | 75153076 | ID=cds.MS.gene71819.t1;Parent=MS.gene71819.t1 |
| Gene Sequence |
| Protein sequence |
