AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72503


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72503.t1 MTR_4g036050 96.535 202 5 1 1 200 1 202 2.01e-143 397
MS.gene72503.t1 MTR_4g036050 89.604 202 5 2 1 200 1 188 1.95e-128 359
MS.gene72503.t1 MTR_4g036050 89.604 202 5 2 1 200 1 188 2.77e-128 358
MS.gene72503.t1 MTR_4g036050 82.673 202 5 2 1 200 1 174 3.69e-115 325
MS.gene72503.t1 MTR_7g075870 47.619 168 87 1 1 167 1 168 2.84e-45 149
MS.gene72503.t1 MTR_7g075870 47.619 168 86 2 1 167 1 167 1.82e-43 144
MS.gene72503.t1 MTR_8g033220 45.087 173 88 3 1 169 1 170 2.50e-42 142
MS.gene72503.t1 MTR_8g033220 45.087 173 88 3 1 169 1 170 3.15e-42 142
MS.gene72503.t1 MTR_3g452380 40.609 197 109 4 1 190 16 211 8.13e-42 141
MS.gene72503.t1 MTR_8g066260 42.262 168 96 1 1 167 1 168 1.16e-40 138
MS.gene72503.t1 MTR_8g097090 44.318 176 94 2 1 173 1 175 2.32e-40 137
MS.gene72503.t1 MTR_7g075850 47.024 168 88 1 1 167 1 168 8.68e-40 136
MS.gene72503.t1 MTR_7g016600 44.643 168 91 2 1 167 1 167 1.03e-38 133
MS.gene72503.t1 MTR_5g046790 39.779 181 102 2 1 177 1 178 2.15e-38 131
MS.gene72503.t1 MTR_3g084980 44.118 170 91 2 1 167 1 169 2.56e-38 132
MS.gene72503.t1 MTR_8g033270 44.970 169 91 2 1 168 1 168 1.82e-37 130
MS.gene72503.t1 MTR_2g009890 43.678 174 94 2 1 171 1 173 3.39e-37 130
MS.gene72503.t1 MTR_6g015975 44.048 168 92 2 1 167 1 167 6.50e-37 129
MS.gene72503.t1 MTR_4g109830 41.071 168 98 1 1 167 1 168 1.07e-36 128
MS.gene72503.t1 MTR_5g031000 39.524 210 112 5 1 200 1 205 1.26e-36 127
MS.gene72503.t1 MTR_5g031000 39.216 204 118 3 1 200 1 202 2.34e-36 127
MS.gene72503.t1 MTR_2g017865 40.805 174 101 2 1 173 16 188 2.94e-36 127
MS.gene72503.t1 MTR_4g102530 44.253 174 83 5 1 167 1 167 3.11e-36 126
MS.gene72503.t1 MTR_4g109810 42.515 167 95 1 1 167 1 166 5.70e-36 126
MS.gene72503.t1 MTR_3g005530 41.818 165 94 2 1 164 1 164 1.32e-35 125
MS.gene72503.t1 MTR_1g038300 36.453 203 120 3 1 194 1 203 6.42e-35 123
MS.gene72503.t1 MTR_8g087860 37.778 180 110 2 1 179 17 195 1.25e-34 123
MS.gene72503.t1 MTR_7g016630 38.922 167 101 1 1 167 1 166 1.98e-33 120
MS.gene72503.t1 MTR_6g464720 38.889 180 100 3 1 174 1 176 9.42e-33 118
MS.gene72503.t1 MTR_5g066180 42.105 171 89 4 1 167 1 165 1.49e-31 114
MS.gene72503.t1 MTR_1g053070 36.316 190 113 4 1 183 1 189 1.35e-29 110
MS.gene72503.t1 MTR_3g088615 39.310 145 85 2 1 145 1 142 1.53e-29 108
MS.gene72503.t1 MTR_1g101970 37.870 169 102 2 1 167 1 168 5.10e-29 107
MS.gene72503.t1 MTR_5g046870 51.961 102 41 2 1 94 1 102 8.40e-28 101
MS.gene72503.t1 MTR_0003s0590 38.235 170 101 2 1 167 1 169 1.68e-27 104
MS.gene72503.t1 MTR_4g093970 36.782 174 106 2 1 171 27 199 2.21e-27 103
MS.gene72503.t1 MTR_3g113030 35.465 172 105 4 1 170 1 168 1.28e-26 102
MS.gene72503.t1 MTR_5g032520 39.766 171 95 4 1 167 1 167 2.77e-26 100
MS.gene72503.t1 MTR_1g029670 36.986 146 87 2 1 145 1 142 8.21e-26 98.6
MS.gene72503.t1 MTR_5g032150 39.181 171 96 4 1 167 1 167 4.45e-25 97.8
MS.gene72503.t1 MTR_2g461710 66.102 59 20 0 1 59 1 59 5.65e-23 87.8
MS.gene72503.t1 MTR_5g021270 33.333 168 105 3 1 164 1 165 1.80e-22 91.3
MS.gene72503.t1 MTR_5g021270 33.333 168 105 3 1 164 1 165 2.02e-22 90.9
MS.gene72503.t1 MTR_5g066960 66.102 59 20 0 1 59 1 59 3.82e-22 85.5
MS.gene72503.t1 MTR_4g093030 50.575 87 28 1 1 72 1 87 3.21e-21 85.9
MS.gene72503.t1 MTR_1g041615 40.206 97 53 1 16 107 20 116 1.80e-17 75.5
MS.gene72503.t1 MTR_3g102570 46.575 73 39 0 1 73 1 73 2.85e-17 78.6
MS.gene72503.t1 MTR_4g084740 42.169 83 48 0 1 83 1 83 3.58e-17 78.6
MS.gene72503.t1 MTR_2g093190 28.111 217 122 6 2 200 9 209 1.02e-16 75.9
MS.gene72503.t1 MTR_1g063160 39.583 96 55 2 1 96 1 93 4.65e-15 70.5
MS.gene72503.t1 MTR_8g079502 36.538 104 55 2 1 104 1 93 4.99e-15 70.1
MS.gene72503.t1 MTR_8g051580 56.364 55 24 0 1 55 1 55 6.67e-15 70.1
MS.gene72503.t1 MTR_1g047550 44.444 72 39 1 1 72 1 71 1.17e-13 66.6
MS.gene72503.t1 MTR_4g131030 44.444 72 39 1 1 72 1 71 2.66e-13 66.2
MS.gene72503.t1 MTR_1g054265 43.836 73 40 1 1 73 1 72 2.67e-13 65.5
MS.gene72503.t1 MTR_3g030770 29.730 185 105 7 2 168 9 186 2.93e-13 66.2
MS.gene72503.t1 MTR_1g108510 29.730 185 105 7 2 168 9 186 3.02e-13 66.2
MS.gene72503.t1 MTR_4g094632 31.148 122 80 2 1 122 1 118 4.89e-13 64.3
MS.gene72503.t1 MTR_4g094638 35.417 96 59 2 1 96 1 93 1.07e-12 63.9
MS.gene72503.t1 MTR_1g108580 26.484 219 123 6 2 200 9 209 1.84e-12 64.3
MS.gene72503.t1 MTR_2g105290 35.632 87 55 1 1 87 11 96 2.77e-12 62.8
MS.gene72503.t1 MTR_4g108720 41.333 75 43 1 1 74 1 75 3.03e-12 64.7
MS.gene72503.t1 MTR_8g043650 27.632 152 85 4 2 132 9 156 3.19e-12 63.5
MS.gene72503.t1 MTR_5g045560 36.905 84 51 2 1 84 8 89 3.63e-12 63.5
MS.gene72503.t1 MTR_3g052920 40.000 70 41 1 2 71 9 77 3.96e-12 63.2
MS.gene72503.t1 MTR_8g086290 38.356 73 44 1 2 74 12 83 4.04e-12 62.4
MS.gene72503.t1 MTR_1g106070 40.000 70 41 1 2 71 9 77 4.38e-12 62.4
MS.gene72503.t1 MTR_3g080940 35.417 96 58 3 1 96 8 99 5.04e-12 62.8
MS.gene72503.t1 MTR_2g030740 42.029 69 39 1 3 71 10 77 5.76e-12 62.8
MS.gene72503.t1 MTR_1g105910 40.000 70 41 1 2 71 9 77 7.54e-12 62.8
MS.gene72503.t1 MTR_2g085280 41.429 70 40 1 2 71 9 77 1.18e-11 62.0
MS.gene72503.t1 MTR_2g085250 41.429 70 40 1 2 71 9 77 1.25e-11 62.0
MS.gene72503.t1 MTR_3g052870 30.147 136 79 4 2 125 9 140 1.27e-11 61.6
MS.gene72503.t1 MTR_8g046350 40.278 72 42 1 1 72 1 71 1.56e-11 60.5
MS.gene72503.t1 MTR_1g077360 40.000 70 41 1 2 71 9 77 1.66e-11 61.6
MS.gene72503.t1 MTR_1g105920 27.000 200 127 7 2 194 9 196 1.83e-11 61.6
MS.gene72503.t1 MTR_1g012570 40.000 70 41 1 2 71 9 77 2.38e-11 61.2
MS.gene72503.t1 MTR_5g041650 38.542 96 54 3 1 94 38 130 2.66e-11 62.0
MS.gene72503.t1 MTR_7g028448 62.500 40 15 0 16 55 26 65 5.47e-11 59.3
MS.gene72503.t1 MTR_4g036915 62.500 40 15 0 16 55 26 65 5.47e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72503.t1 AT1G71692 60.190 211 73 4 1 200 1 211 4.63e-77 230
MS.gene72503.t1 AT3G58780 44.253 174 95 2 1 173 16 188 5.47e-42 142
MS.gene72503.t1 AT2G42830 43.750 176 97 2 1 175 16 190 5.59e-42 142
MS.gene72503.t1 AT3G58780 44.253 174 95 2 1 173 22 194 6.33e-42 142
MS.gene72503.t1 AT2G45660 45.349 172 88 3 1 169 1 169 1.76e-41 139
MS.gene72503.t1 AT2G42830 44.382 178 95 3 1 175 16 192 9.50e-41 139
MS.gene72503.t1 AT4G09960 42.529 174 98 2 1 173 2 174 9.06e-40 135
MS.gene72503.t1 AT4G09960 42.529 174 98 2 1 173 1 173 1.03e-39 135
MS.gene72503.t1 AT1G69120 40.331 181 101 2 1 177 1 178 1.13e-39 135
MS.gene72503.t1 AT4G09960 42.529 174 98 2 1 173 11 183 1.38e-39 135
MS.gene72503.t1 AT1G24260 43.605 172 92 2 1 168 1 171 1.57e-39 135
MS.gene72503.t1 AT2G45660 45.912 159 80 3 1 156 1 156 1.69e-39 133
MS.gene72503.t1 AT1G24260 43.353 173 92 2 1 168 1 172 2.21e-39 135
MS.gene72503.t1 AT1G69120 40.331 181 101 2 1 177 1 178 3.04e-39 135
MS.gene72503.t1 AT4G09960 42.529 174 98 2 1 173 27 199 3.35e-39 135
MS.gene72503.t1 AT3G58780 42.529 174 91 2 1 173 16 181 2.89e-38 132
MS.gene72503.t1 AT4G18960 41.379 174 100 2 2 174 18 190 2.89e-38 132
MS.gene72503.t1 AT3G58780 38.889 198 96 2 1 173 16 213 5.57e-38 132
MS.gene72503.t1 AT1G26310 37.569 181 108 2 1 177 1 180 8.45e-38 131
MS.gene72503.t1 AT2G45650 44.444 171 86 3 1 167 1 166 1.04e-37 131
MS.gene72503.t1 AT4G09960 41.279 172 99 2 1 171 1 171 1.06e-37 130
MS.gene72503.t1 AT3G58780 47.917 144 73 2 1 143 16 158 1.16e-37 132
MS.gene72503.t1 AT1G24260 43.478 161 85 2 1 156 1 160 3.22e-37 129
MS.gene72503.t1 AT4G37940 41.212 165 94 3 1 164 1 163 2.13e-36 127
MS.gene72503.t1 AT4G22950 40.936 171 100 1 1 171 1 170 2.36e-36 125
MS.gene72503.t1 AT5G60910 40.351 171 95 2 1 167 1 168 2.56e-36 127
MS.gene72503.t1 AT2G03710 42.857 168 95 1 1 167 1 168 3.10e-36 125
MS.gene72503.t1 AT4G09960 41.573 178 98 3 1 173 96 272 6.41e-36 128
MS.gene72503.t1 AT4G11880 41.026 156 92 0 1 156 1 156 1.79e-35 123
MS.gene72503.t1 AT4G11880 41.026 156 92 0 1 156 1 156 1.79e-35 123
MS.gene72503.t1 AT3G02310 43.452 168 94 1 1 167 1 168 1.80e-35 124
MS.gene72503.t1 AT5G15800 43.452 168 94 1 1 167 1 168 2.04e-35 125
MS.gene72503.t1 AT2G03710 42.857 168 95 1 1 167 1 168 2.50e-35 125
MS.gene72503.t1 AT2G03710 42.857 168 95 1 1 167 1 168 2.63e-35 125
MS.gene72503.t1 AT4G22950 40.449 178 105 1 1 178 1 177 3.01e-35 124
MS.gene72503.t1 AT4G22950 40.449 178 105 1 1 178 1 177 3.01e-35 124
MS.gene72503.t1 AT5G15800 43.452 168 94 1 1 167 1 168 3.09e-35 125
MS.gene72503.t1 AT3G57230 40.854 164 87 4 1 160 1 158 8.57e-35 123
MS.gene72503.t1 AT3G57230 40.854 164 87 4 1 160 1 158 8.57e-35 123
MS.gene72503.t1 AT3G02310 43.452 168 94 1 1 167 1 168 1.22e-34 123
MS.gene72503.t1 AT4G37940 42.667 150 83 3 1 149 1 148 1.51e-34 122
MS.gene72503.t1 AT5G62165 39.645 169 100 2 1 168 1 168 6.25e-34 120
MS.gene72503.t1 AT5G62165 39.645 169 100 2 1 168 1 168 6.25e-34 120
MS.gene72503.t1 AT5G62165 39.645 169 100 2 1 168 1 168 6.25e-34 120
MS.gene72503.t1 AT5G13790 36.364 209 117 3 1 200 1 202 2.60e-33 120
MS.gene72503.t1 AT4G11880 41.916 167 97 0 1 167 1 167 3.17e-33 119
MS.gene72503.t1 AT4G11880 41.916 167 97 0 1 167 1 167 3.17e-33 119
MS.gene72503.t1 AT5G13790 37.143 210 117 5 1 200 1 205 6.24e-33 119
MS.gene72503.t1 AT4G37940 41.892 148 83 3 1 147 1 146 1.10e-32 116
MS.gene72503.t1 AT5G23260 37.234 188 115 2 1 187 1 186 1.24e-32 118
MS.gene72503.t1 AT5G62165 39.490 157 93 2 1 156 1 156 1.56e-32 115
MS.gene72503.t1 AT5G62165 39.490 157 93 2 1 156 1 156 1.56e-32 115
MS.gene72503.t1 AT5G62165 39.490 157 93 2 1 156 1 156 1.56e-32 115
MS.gene72503.t1 AT5G23260 37.313 201 122 3 1 200 17 214 2.21e-32 117
MS.gene72503.t1 AT3G30260 40.789 152 87 2 1 150 1 151 2.63e-32 117
MS.gene72503.t1 AT3G57230 41.259 143 83 1 1 143 1 142 3.07e-32 114
MS.gene72503.t1 AT3G61120 42.262 168 93 3 1 167 1 165 3.62e-32 116
MS.gene72503.t1 AT5G62165 41.497 147 84 2 1 146 1 146 4.38e-32 114
MS.gene72503.t1 AT5G62165 41.497 147 84 2 1 146 1 146 4.38e-32 114
MS.gene72503.t1 AT5G62165 41.497 147 84 2 1 146 1 146 4.38e-32 114
MS.gene72503.t1 AT5G62165 41.497 147 84 2 1 146 1 146 4.38e-32 114
MS.gene72503.t1 AT5G62165 41.497 147 84 2 1 146 1 146 4.38e-32 114
MS.gene72503.t1 AT2G14210 41.860 172 98 2 1 171 1 171 8.87e-32 115
MS.gene72503.t1 AT2G14210 41.860 172 98 2 1 171 1 171 1.09e-31 115
MS.gene72503.t1 AT5G51870 37.427 171 100 3 1 167 1 168 1.63e-30 111
MS.gene72503.t1 AT5G51870 37.427 171 100 3 1 167 1 168 3.06e-30 111
MS.gene72503.t1 AT5G62165 41.958 143 81 2 1 142 1 142 4.37e-30 110
MS.gene72503.t1 AT5G62165 41.958 143 81 2 1 142 1 142 4.37e-30 110
MS.gene72503.t1 AT5G51870 37.427 171 100 3 1 167 11 178 5.53e-30 110
MS.gene72503.t1 AT5G23260 36.816 201 118 4 1 200 17 209 1.82e-29 110
MS.gene72503.t1 AT5G51860 37.349 166 95 3 1 161 1 162 7.17e-29 107
MS.gene72503.t1 AT5G51860 37.349 166 95 3 1 161 1 162 8.57e-29 107
MS.gene72503.t1 AT2G22630 36.970 165 101 3 1 164 1 163 1.36e-28 107
MS.gene72503.t1 AT2G22630 36.970 165 101 3 1 164 1 163 1.36e-28 107
MS.gene72503.t1 AT5G51870 38.667 150 85 3 1 146 1 147 1.95e-28 105
MS.gene72503.t1 AT5G23260 40.000 150 87 2 1 149 1 148 4.86e-28 105
MS.gene72503.t1 AT5G51870 38.667 150 85 3 1 146 24 170 5.02e-28 104
MS.gene72503.t1 AT3G57390 35.196 179 107 2 1 171 1 178 7.45e-26 99.8
MS.gene72503.t1 AT3G57390 35.196 179 107 2 1 171 1 178 1.41e-25 99.8
MS.gene72503.t1 AT5G62165 58.667 75 30 1 1 75 1 74 1.47e-25 95.9
MS.gene72503.t1 AT5G65070 34.118 170 99 4 1 167 1 160 2.46e-25 97.8
MS.gene72503.t1 AT2G22540 37.870 169 101 3 1 167 1 167 3.08e-25 98.6
MS.gene72503.t1 AT2G22540 37.870 169 101 3 1 167 1 167 3.08e-25 98.6
MS.gene72503.t1 AT4G24540 37.441 211 105 8 1 191 1 204 3.79e-25 97.8
MS.gene72503.t1 AT5G20240 35.374 147 90 2 1 146 1 143 3.90e-25 97.4
MS.gene72503.t1 AT5G20240 35.616 146 89 2 1 145 1 142 1.12e-24 94.7
MS.gene72503.t1 AT5G65050 33.908 174 102 3 1 171 1 164 3.25e-24 94.4
MS.gene72503.t1 AT5G65060 31.959 194 115 5 1 191 1 180 3.27e-24 94.7
MS.gene72503.t1 AT2G22540 39.521 167 96 3 1 167 1 162 5.02e-24 95.5
MS.gene72503.t1 AT5G65050 33.908 174 102 3 1 171 1 164 1.14e-23 93.6
MS.gene72503.t1 AT5G65070 31.959 194 102 4 1 167 1 191 1.17e-23 94.4
MS.gene72503.t1 AT5G65060 33.529 170 100 4 1 167 1 160 3.10e-23 92.4
MS.gene72503.t1 AT5G10140 32.692 156 98 1 1 156 1 149 7.06e-23 90.9
MS.gene72503.t1 AT5G65070 34.228 149 85 4 1 146 1 139 1.68e-22 89.0
MS.gene72503.t1 AT1G31140 36.913 149 91 2 1 146 1 149 1.92e-22 90.9
MS.gene72503.t1 AT1G31140 36.735 147 92 1 1 146 1 147 2.05e-22 90.5
MS.gene72503.t1 AT5G65070 30.693 202 110 4 1 175 1 199 2.40e-22 90.5
MS.gene72503.t1 AT5G65050 33.333 174 92 3 1 171 1 153 2.46e-22 89.7
MS.gene72503.t1 AT5G65080 32.317 164 98 4 1 161 8 161 3.14e-22 89.7
MS.gene72503.t1 AT5G65050 34.161 161 93 3 1 158 1 151 7.62e-22 88.2
MS.gene72503.t1 AT3G54340 35.754 179 99 6 1 172 1 170 1.34e-21 89.0
MS.gene72503.t1 AT5G10140 33.562 146 90 1 1 146 1 139 1.35e-21 87.4
MS.gene72503.t1 AT5G65060 32.584 178 96 4 1 175 1 157 1.51e-21 87.4
MS.gene72503.t1 AT5G10140 33.562 146 90 1 1 146 1 139 2.08e-21 87.4
MS.gene72503.t1 AT5G10140 33.562 146 90 1 1 146 1 139 2.59e-21 87.4
MS.gene72503.t1 AT1G77080 34.706 170 98 4 1 167 1 160 7.93e-21 85.5
MS.gene72503.t1 AT1G77080 34.270 178 104 4 1 175 1 168 1.04e-20 85.5
MS.gene72503.t1 AT1G77080 34.706 170 98 4 1 167 1 160 1.62e-20 84.7
MS.gene72503.t1 AT5G65070 32.308 195 101 7 1 167 1 192 3.66e-20 85.1
MS.gene72503.t1 AT1G77080 30.693 202 106 5 1 175 1 195 8.12e-19 81.3
MS.gene72503.t1 AT1G77080 33.146 178 102 5 1 175 1 164 7.45e-18 78.2
MS.gene72503.t1 AT5G65080 52.542 59 28 0 1 59 8 66 4.65e-16 73.6
MS.gene72503.t1 AT1G77980 44.595 74 41 0 1 74 1 74 5.25e-16 75.1
MS.gene72503.t1 AT1G77080 33.333 159 89 5 1 156 1 145 1.18e-15 71.2
MS.gene72503.t1 AT1G22130 42.667 75 43 0 1 75 1 75 1.85e-15 73.9
MS.gene72503.t1 AT1G72350 47.887 71 34 1 2 72 43 110 1.41e-14 70.1
MS.gene72503.t1 AT4G37435 37.168 113 66 3 1 111 1 110 5.20e-14 67.8
MS.gene72503.t1 AT1G77950 36.585 82 52 0 1 82 1 82 2.68e-13 67.0
MS.gene72503.t1 AT1G77950 36.585 82 52 0 1 82 1 82 2.68e-13 67.0
MS.gene72503.t1 AT1G77950 36.585 82 52 0 1 82 1 82 2.68e-13 67.0
MS.gene72503.t1 AT1G77950 36.585 82 52 0 1 82 1 82 2.68e-13 67.0
MS.gene72503.t1 AT2G34440 41.667 72 41 1 1 72 1 71 2.81e-13 65.5
MS.gene72503.t1 AT2G24840 42.254 71 40 1 1 71 62 131 2.89e-13 67.0
MS.gene72503.t1 AT2G03060 44.000 75 41 1 1 74 1 75 1.17e-12 65.9
MS.gene72503.t1 AT2G03060 44.000 75 41 1 1 74 1 75 1.17e-12 65.9
MS.gene72503.t1 AT2G03060 44.000 75 41 1 1 74 1 75 1.17e-12 65.9
MS.gene72503.t1 AT2G03060 44.000 75 41 1 1 74 1 75 1.35e-12 65.9
MS.gene72503.t1 AT1G01530 48.276 58 30 0 1 58 6 63 1.35e-12 64.7
MS.gene72503.t1 AT3G66656 46.552 58 31 0 1 58 1 58 1.82e-12 63.5
MS.gene72503.t1 AT1G18750 31.469 143 81 3 1 143 1 126 3.80e-12 64.7
MS.gene72503.t1 AT1G18750 41.333 75 43 1 1 74 1 75 6.12e-12 63.9
MS.gene72503.t1 AT1G18750 41.333 75 43 1 1 74 1 75 6.48e-12 63.9
MS.gene72503.t1 AT1G69540 39.189 74 45 0 1 74 1 74 1.62e-11 62.8
MS.gene72503.t1 AT4G36590 43.478 69 38 1 2 70 7 74 1.90e-11 61.6
MS.gene72503.t1 AT1G69540 39.189 74 45 0 1 74 1 74 2.25e-11 62.4

Find 48 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTGTTTGGAGGAGGATT+AGG 0.243362 4.1:+64162613 MS.gene72503:CDS
CGTGCTTCAGTTACAGCTTC+AGG 0.305131 4.1:-64159506 None:intergenic
GTGCTTTGCGATGCTGAAAT+TGG 0.317759 4.1:+64158949 MS.gene72503:CDS
TTGAAAAGAACCTCGAAATC+TGG 0.328582 4.1:+64162665 MS.gene72503:CDS
TAACCTTATCCCTCAAAGTT+TGG 0.340993 4.1:-64162869 None:intergenic
ATTATTGGCAGGTATTTGTT+TGG 0.358105 4.1:+64162601 MS.gene72503:intron
ATTTGTTTGGAGGAGGATTA+GGG 0.367328 4.1:+64162614 MS.gene72503:CDS
AAATAAGTATCTCCATGATT+TGG 0.377590 4.1:+64165974 MS.gene72503:CDS
AATCCAAACTTTGAGGGATA+AGG 0.388651 4.1:+64162866 MS.gene72503:CDS
TGGAGGAGGATTAGGGACTA+TGG 0.415641 4.1:+64162621 MS.gene72503:CDS
ATTTAAGGAGGGAACACTTA+AGG 0.425708 4.1:+64165947 MS.gene72503:intron
ATGAATATGTTACCAAATCA+TGG 0.430713 4.1:-64165986 None:intergenic
GGCAGGTATTTGTTTGGAGG+AGG 0.434879 4.1:+64162607 MS.gene72503:intron
TTCCCACTAATTATACAAGA+TGG 0.434963 4.1:+64166158 MS.gene72503:CDS
AAAGTCACTTGCCTGTGCAC+TGG 0.436750 4.1:-64158880 None:intergenic
AGAGATCGATACCTTGCAAA+AGG 0.454575 4.1:+64161964 MS.gene72503:CDS
ATCCCATCTTGTATAATTAG+TGG 0.454812 4.1:-64166161 None:intergenic
AAGTCACTTGCCTGTGCACT+GGG 0.471642 4.1:-64158879 None:intergenic
ATTGGCAGGTATTTGTTTGG+AGG 0.478009 4.1:+64162604 MS.gene72503:intron
ACTTTCTGTAAGCGCCGAGC+GGG 0.485647 4.1:+64158898 MS.gene72503:CDS
CACAAGAAATCCAAACTTTG+AGG 0.490472 4.1:+64162859 MS.gene72503:CDS
CTCTATGAACTCGCCACCAA+AGG 0.491747 4.1:+64159000 MS.gene72503:CDS
CTTCTCTATTAGCCCTTGCA+TGG 0.492434 4.1:-64159456 None:intergenic
CATTATACATCCAGATTTCG+AGG 0.493442 4.1:-64162675 None:intergenic
ATACCTTGCAAAAGGGTCTC+AGG 0.496187 4.1:+64161972 MS.gene72503:CDS
AACGAAGTATCAGTAGCAAA+TGG 0.506323 4.1:-64166137 None:intergenic
CCTTCTTCAAAAGCCCCGCT+CGG 0.520394 4.1:-64158912 None:intergenic
TCCCACTAATTATACAAGAT+GGG 0.527346 4.1:+64166159 MS.gene72503:CDS
TTCATAGAGCTTTCCATGAG+CGG 0.532053 4.1:-64158986 None:intergenic
AATCGACATGGCTCGCGGGA+AGG 0.534307 4.1:+64158834 None:intergenic
ACAAGAAATCCAAACTTTGA+GGG 0.536382 4.1:+64162860 MS.gene72503:CDS
GTATAATGTTCGCTCAATGA+AGG 0.550286 4.1:+64162690 MS.gene72503:CDS
TCTATGAACTCGCCACCAAA+GGG 0.554348 4.1:+64159001 MS.gene72503:CDS
TCCCATCTTGTATAATTAGT+GGG 0.555246 4.1:-64166160 None:intergenic
GGATTGAGAACCCAGTGCAC+AGG 0.556607 4.1:+64158869 MS.gene72503:CDS
ATGAAATGAAGAACCATGCA+AGG 0.564040 4.1:+64159443 MS.gene72503:intron
TCATATCTAGGATGCTAAAG+AGG 0.576504 4.1:+64161922 MS.gene72503:intron
GAGATCGATACCTTGCAAAA+GGG 0.585390 4.1:+64161965 MS.gene72503:CDS
AGGATTAGGGACTATGGCAA+TGG 0.589394 4.1:+64162627 MS.gene72503:CDS
AAAAGAGACATACCCTTTGG+TGG 0.593726 4.1:-64159013 None:intergenic
CTCGCGGGAAGGTTCAGCTA+AGG 0.601343 4.1:+64158845 MS.gene72503:CDS
GCGGGAAGGTTCAGCTAAGG+AGG 0.602356 4.1:+64158848 MS.gene72503:CDS
GATCTCTTGCTTGAGCACAT+TGG 0.611486 4.1:-64161948 None:intergenic
CTTTCTGTAAGCGCCGAGCG+GGG 0.616522 4.1:+64158899 MS.gene72503:CDS
TGAAATGAAGAACCATGCAA+GGG 0.639061 4.1:+64159444 MS.gene72503:intron
GACTTTCTGTAAGCGCCGAG+CGG 0.650769 4.1:+64158897 MS.gene72503:CDS
TAAGGAGGGAACACTTAAGG+CGG 0.674035 4.1:+64165950 MS.gene72503:intron
AAGTACTTGAAGTTCACACG+AGG 0.761674 4.1:+64159476 MS.gene72503:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.1 gene 64158841 64166196 64158841 ID=MS.gene72503
chr4.1 mRNA 64158841 64166196 64158841 ID=MS.gene72503.t1;Parent=MS.gene72503
chr4.1 exon 64158841 64159022 64158841 ID=MS.gene72503.t1.exon1;Parent=MS.gene72503.t1
chr4.1 CDS 64158841 64159022 64158841 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
chr4.1 exon 64159454 64159535 64159454 ID=MS.gene72503.t1.exon2;Parent=MS.gene72503.t1
chr4.1 CDS 64159454 64159535 64159454 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
chr4.1 exon 64161932 64161993 64161932 ID=MS.gene72503.t1.exon3;Parent=MS.gene72503.t1
chr4.1 CDS 64161932 64161993 64161932 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
chr4.1 exon 64162612 64162711 64162612 ID=MS.gene72503.t1.exon4;Parent=MS.gene72503.t1
chr4.1 CDS 64162612 64162711 64162612 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
chr4.1 exon 64162846 64162887 64162846 ID=MS.gene72503.t1.exon5;Parent=MS.gene72503.t1
chr4.1 CDS 64162846 64162887 64162846 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
chr4.1 exon 64165954 64165995 64165954 ID=MS.gene72503.t1.exon6;Parent=MS.gene72503.t1
chr4.1 CDS 64165954 64165995 64165954 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
chr4.1 exon 64166104 64166196 64166104 ID=MS.gene72503.t1.exon7;Parent=MS.gene72503.t1
chr4.1 CDS 64166104 64166196 64166104 ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1
Gene Sequence

>MS.gene72503

ATGGCTCGCGGGAAGGTTCAGCTAAGGAGGATTGAGAACCCAGTGCACAGGCAAGTGACTTTCTGTAAGCGCCGAGCGGGGCTTTTGAAGAAGGCTAAGGAGCTCTCTGTGCTTTGCGATGCTGAAATTGGTCTTGTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACCAAAGGGTATGTCTCTTTTTTCGATCAATAATACACTCAATGAAAAATGTTTCGATCATTTGCATAACCCTAAATGATGTAGTGTGTGTAACCGTGCACCGCAGAACTTTGCAATATATAGGATTCAAAATTGTTTGAATTATGTGCAACACTATACATGATTTGTATACATCCGTACATTGCTTAACTTTACATATAGCCAACGTAGCGGATGAAATCCAAACAAATATGTTTGGATTTCCAATAACACTATGTGCACTGTAGAGTTTTAGAGTGCATATAGTGCAGACTTCAAAGATCTATAGTGGATCCTCTGTAACCCGTACTCAATGCATTTAGAGCTCTACATTGTAGGGATCTATAGCCCATCAAGTTTATTTTGGTCACTGAAGTTTGACTTGTCAAGTTCATTGTTTTTGTTTATACATGAAATGAAGAACCATGCAAGGGCTAATAGAGAAGTACTTGAAGTTCACACGAGGAACTCAACCTGAAGCTGTAACTGAAGCACGTCCTCTTGTTTCGGTATGTTTCTCCAGCTAGCTATATGTTAAACGATATTATAATATGAATGTTAGTTGTAGAAGCAAAATGGAAAAAATGTATATGCTTACTATATTATATATGTAAATTAAAAGAGTAGTGATAGTGGTATTGGATGCTCTAATTGGTGCATTATCATCACTGAATAATATAATAATATAGTGATAGTGTTGATATATATATATACCCGGTCAAATATAGAAATCAAGGTATGTTTTGTTCTCTTTTTGTCTTGTTTTGACACATGTAGGACTTGATTCTATGAGATAAATTATGTCGGGTTTTGACACATGTAGGAGATCATATTAACGTCACATCTATTGCATTAGTAACTCATATAATATCAATTAATTCCACTGCTTTGTTGTTACTCCTTAGCCAACCTTGTGCTTAATGCTTAGACAACTTGATATTAATAAATTCATTTTGCTTATTCAAAAGACAATGTTTTGGGTTGGAGTATCTATTTTATTTTTATTGACAAATTTTTTAGATAAGCGAGATAGTTTATAAGTAATTAAAGAGTGCAAGAGATACTCTAATCTATTTACAAAACAACAAATTTAGACACTTACTTGCAGCGAATTAGTGATACAATAAAAGGGATTTAAGAGCTAATCAGAAAATATCCCTTATTCCTACCCTCTTCACAATATCCCTTATTGATATATTTTTACTTCATCCGTTTATTTTTAAATGTTGTTTGACTATATTATTTTTTTAATTTATTTAACTTTCCTTTTGATAATTTAAGCGTGCGATTTTTTAATTATACCCTTTCATATTACTCAAACAATTTTTTTTTTTGTTACATGTAAATATAAACTTTCATGAAACTAAATTCGGTTCTCTATAATAGTGGTTTCATGATATGATAAAGAAAAACTCCAAAAATCCACTTCATTAGTGGAGAGTACTATTCTAAAATGAAACTTAAAAAAATCGAAAAGAGTATTATTATTTTTTTAAAAAATTCTTTGATACCGAAAGCTTGTTGTATAAATGAATTCAAAATTTAAATTTAATTTAAAAGAATTGAATATATATATATATATAAAATTATGTCCACAATTATTTATAATATGTTCTTAATATATGTGACATCAAATGATAGGATATTGTATTAAGCGAAACTCAAAAGTAATGACACCTTAATCAAGGTAGCAAATACTTATGAAATGCTTACAATTTTAAGTAAAAGAGGAGTGTTATGAACATCCTTTTTCTAACATCTTCTCTAACATTTACTCTCTTATTGTGTGAAATTCATGTGGATATCATCCTCTAAAAATGGATCGTATATAGAGTGGTGAGACCCACGTGAGTTTCATCTAACAGAAGAATGAGTGTTAGAGAGTGTGCTAGAAAGAGTGTGTTCGTGACATTTTTTTATTTAAAAAAATCAGGACGAGGGAATGACACTTAAATTAAGGTAGCAAATACTTAAGAATGAAAATTCATTTACTTCTGTTGGAGACTAGAAGACTCAAACGTGCAACATGTGAAATCTAAAACCTCTTATACTTCACTAGGCCAACTCTTCTAAGTTACATACAATAGTAGTATCTATTTATGAAAGAATGATTTGTCAATTAATACTACAGAATCAATTAAAATAATTCTTTTGAAGTATTACTGCTAGAACAAAAAAAAAAAAAATGGAAATTGCGGTACATATGCACATTGTTACATTTTTCATGTATGATTTTAAATTGTTGTTGCGGTTGCCGATGTTTATTTTTTGCAACCGCAAAATTTTATTGAAACACTTGTGCTAGAACAGAAGATAGGCCCCGTAACAAGCCCTAGATTTTCTTGTAACACACATTGCGACTTAAAATAATTTAAATTTTTTACAAATTATTATATAAAGTGGCAACACCGTGCTACCATAAAATTTACTGACCATACTAGAGTGCAAATTTTCTCTATAAATCATTGTTGAAAGATGCTTAAAATACACCGTTGAGAGATTGCTAAAAGTAAGAATTTTCATTAGATCGAAAGGAGATTGAGATTTGGGTTCTGAAAATTTTATTTTTGGTGAGCTGATTTTGAACTAACGAGACTAAATTCGTCTGATGCGGTCTTAATACGGTAACAATGCAGCCGTACACGTGATTGAAGATCAAACCGCAATTGCAGTGTGATGTCGTTGCAATGGCTACCACAGTTTGAAAGCATTTTTACATGCCAATTTTTTGTTGTTGTACACATGTACTTGATGATTGAACAACTCAAACATGCAATTTACATGTTCTAATATCAATATAATTAATTGATTATTTACGATTCTATAGTGTTGTCTGATGATATTATTTTTGGCACAATATCTATTCTACTAAGTTTGTTTTTTGCATGTTCATATCTAGGATGCTAAAGAGGAAACCAATGTGCTCAAGCAAGAGATCGATACCTTGCAAAAGGGTCTCAGGTACGTACATTTGACTCTCGAGAAAATATAAACCAAAATATTGAAAAGTCATCGATAATGTTGTCATTACAAGAATAACATGCCTAATTTAAATTTCTCCATCCATTTAATTTGAATCAATTTTTTTTTCATCCATTAAAGAGTTTTTTTTCTTTCAAGGAATCATTAAAGAGTTTAAATGTTTCCTAGTGCATGATGTTTATATATACTAGCAGAAATACAAAGACTAACGTTTTCATCTATCTGTTTTCTTATTGCGCTTGATTGTATATCTATTTTATTACATCGCGCTTGATTGTATATCTATTTTATTACATTAGATTATTATTTTTTTGGCAAACAAGATCAATTAAAACTCTTTTTTTGTTTTGTTTCCAATGTCGTTGTTCCCATTGTATTTAATCATATTCATATTATAATGAAAAGTAACTGATTTTATTTTCTTGTAAAATAATTTAATTATAATATTATAAAATGGATAAAATTGTAAATAAAATAGTTTAAATTATTGCTATAATGAAAACTATGTACTTTTACAAATAACTATATTAATGAAAGTATAAATATACTTTCTTTGTAAGCCAAAGAATTAAGAAAATTAAACGGTATTATTGGCAGGTATTTGTTTGGAGGAGGATTAGGGACTATGGCAATGGATGAGTTGCAAGTTCTTGAAAAGAACCTCGAAATCTGGATGTATAATGTTCGCTCAATGAAGGTATCAACCAACAAACTTTTTTCTCTCTCTTAATTAGTGGGTTTAATATCTTTTGTACTTATTTTCATTTGAGTAAAATTATGTTTTGCTGTTTAAAAAAAGAGATTTAATGTGCCTTATACTTTGAACTACAGATGAACATTATGTCACAAGAAATCCAAACTTTGAGGGATAAGGTTAGCATAAACTTATTCAGCTTTTATTTATTTAGCTATTTGCTCGGGCAAGGTCACAACCGTACCCACCCGCTTGAAAATATGATACCAACCGAACCGGAAAAGCGTCACAAAGTGGTAAATTTGAAAGGCAAAGGCTCACGCAAAAAAAAAATGTAGTGACACCATTCCATATTTTCTTCTTTGCATATTCAAGGATAACAAAACAATTTCTCCAACTTCCAAGTCTATTTTCCACCACATCAATAACCGAATTCAAAGTTTAGGACAACCTTGAAAGGAAAGAATCCCAAAATACACGAAGGAAAGGAACCCAATTTACATTTAAGAAATGTTGAGGTTGAGTCCATAAGTGAATACTCCATCTATTAACTTACTCTTGGAGAAGTTAAATTTAAATCCGGAAACCAAGTGGAACAATCTAAGAATAGCATTCATACACCAAATATTCTCCACACAAGCCTCACCAAATAAGAGTGTATCATCAACATATTGAATATGGGAAACTACATGCTTAAAATTTCCCACCTTGAAACCTTTGAAGTAGCCATAGAAATCTCCTTCGTCATGACCACCCATAATCCTTCAAAAACAAAAAGAAAAAGGAACAGAGCCAAAAGGGTCTCCTTGCTTGAGACCTTATGGAATTGAGATTTGATTCGTAAGAAATTCACTCACAACTACAAAAAGGCTTCCCACAAACACATAAGCCTTCATCCATCCTCCCCATTTTTCACAAAATCCAGATCTCTTCAACATATAAGTAAGGAACTTCCAACTAACCGAGTTGTATGCCTTTTCACTTTGCAAAGTCCACCACCTCATTCACCACTAATTTTCCATCTTGAAGCCTCCCTTTAATGAAAGCCAATTGGTTTGGTGAAAAAATGGAGTCCATCACCAAGCATATATAACCATTTTACTAGAACCTTAGCCACCACCTTATACATGCTTCCAAGAAGGTATATTGGGTAGAGTTCAGGAAGAGAGTAAGCATCTAGGATCTTTGGAATAAGGGTGATGAAAAAAGCTTTTGACTTCCTTCTGGTTTAGATTCCAAAACGATTTGAAGAATTCAAAGTTGAAGCCAAGCGTTTCAAAAATTTCTTCCTTTTGAAAGGTTGATCTGAGTTTAAAGTTTTGACTCCCACTCACCAAAGCAAACTCCAACATTTATTTCAACCTATCCCAGCTAACATTAGATAAAAGTTTAGAGTAATATATGGATGGTTTAGCCTAGAAAAAACACTTGCCTGACTCTATTAAATTAGCAAATAAAGTGAAAATATAAGGTGTGATGAAGATGACTAATTACAACTATACAAACACTACATACTAAATAACTGACGAAAACCACAGTGTAGAAATATTCGATCCATTATTAGTTTCTAAGAGAGAGTGTAAAATTTATGCCTCAACGTGGGAGTTTAAGAGAGAAGGGGTGTCTTTGTGAAATAGAAGAAAAAATTTCCTAGATAGAATTAAATTTTTTTATTTTCCTTCATAATGTAAAATCCCCCTAGTATGGGAGAACTGGAAAAATAATTGAGAGTTTAAATGAATTATACGTACAAATCCTTTATTGTTATAATACTTAAAAATTAAAGATATGTTAATCATAAACACTCACCATTCATTTAAAATAAAAATACTTTCAAATAAAGTAAAATACCTCTCTTAATTTGTATCTTCTCCCTTCCTCTCGCCAATCCTCCAAACTCTCAAACGTACCATATAGAAAATACGACAATTAAAATATACGTGATTGCAGTCATTTATAAAAATAAGGAGGAGCTAAACAGTGAAATATATTTTTAAGACATGGTCTTCCAAAAACCTGTTAAAGAAAAGGTAGCATTGGAATGTAGCAAATGATATATATTTTAATATAATTAAGAGCTAAAATTATAAGGGATTTCACTCTTTGGGTTAAGAGCTAAAATACTATGAAATTAGTATATTAGGCCAAGATCAACATTATAAGTGGACATAACTTCTTGACTAAAAACCTTAATATATTGGTTATATCAATTCCATCGGTTATATGTTATTAAATTATTTCTTTTCTATTTAATGTAAAACTTTCTGACACTTACACTCAAACAAATGAATCTACTAGACATTTGAGAAATGTTGATAGAAGAATTTTTAAACCTTATGTGTATTCCTTAACATCTTTGGTCCAACCATCCCAAACTTTTGATACATTTGCTCATCTTTTTTTCCTGGTTATGGTGAGTAAAGAAGGAAAAATAAAAATAGTGGAAAACTACATTCTAGATAAAGACATCATTTTCTAGTAAAAAAAAGTAAATACATCCCTTTGGGAATCCACCAACATAGAAGCTCCTAATAAGATAGGACATACATCAAGCAAAACAAAAGGGTCGACGATGTTAAAGAGTTTCAGTTTGGATCATACATGACTTAAAATCATGTTTGTAAGTGGTTTGTATTCCTTACTTTACAGGTTGATTTTGTAAGAGTTGTGTTAAACCGAACCCAAATTTAAAAATGACATCAAAGGTTATTGAAGTTCTATTATACCGCATGATATAATGTCATTGCTATCAGACCACTCAAGTCTCACTTGAGATGCTTAGTCTTGGGAGTAATAAGATGAGTGTGCTGAGATTTTTTTCATTAAATGAGATATAACTTGAAAATAAGATTAATAGTGGTGGATAATCCTCAACTTGCAAACCAATTTTGTAAGACCGTGTTAACAAATGCTATATATGATTCCTTCAAAAAAAAAATGATACATATGATTTTTTTTTCAATAACAATAATATATAAAAGAGGAAATATGGAATAAAAGGGTTACCAATGTTCATTACAAATAAGTCAAAATCTAACACAAAGGGACACCACTGAAAAGACAAGGCAACAACAAAAATACAATGAAAAATTTGTGGTAATAAAAGAAACAAGTATTCTGAGTTACAAAGAGAACATCAACACATAAAATGCACCCCTAATACAAATGTGTTATTCTATTCTTATTTTTCTTCTTCTATATTTTAATTTATTTACTAAGTAAACTTTTCATCTTTTGTATTTAAGGAGGGAACACTTAAGGCGGCAAATAAGTATCTCCATGATTTGGTAACATATTCATTTCAATTGATTAACTATGCATTTCTTTGAGAAAACATAGTTTAGTTAAAACTTTAAAAGAAAAGATATTCTAATTCATGTCATTTTATTTTACAGGTGTTGGAGAATACTACTGTCACTAACTTTGTTCCATTTGCTACTGATACTTCGTTCCCACTAATTATACAAGATGGGATTTTTCAACTCTAG

Protein sequence

>MS.gene72503.t1

MARGKVQLRRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLYELATKGTMQGLIEKYLKFTRGTQPEAVTEARPLDAKEETNVLKQEIDTLQKGLRYLFGGGLGTMAMDELQVLEKNLEIWMYNVRSMKMNIMSQEIQTLRDKEGTLKAANKYLHDLVLENTTVTNFVPFATDTSFPLIIQDGIFQL