Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72503.t1 | XP_013455351.1 | 96.5 | 202 | 5 | 1 | 1 | 200 | 1 | 202 | 3.00E-101 | 377.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72503.t1 | Q38841 | 60.5 | 210 | 72 | 4 | 1 | 199 | 1 | 210 | 3.4e-61 | 236.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72503.t1 | A0A072UIB8 | 96.5 | 202 | 5 | 1 | 1 | 200 | 1 | 202 | 2.1e-101 | 377.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene72503.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04932 | MS.gene72503 | 0.806189 | 9.28E-50 | -1.69E-46 |
MS.gene049549 | MS.gene72503 | 0.805905 | 1.07E-49 | -1.69E-46 |
MS.gene051422 | MS.gene72503 | 0.848548 | 5.72E-60 | -1.69E-46 |
MS.gene051651 | MS.gene72503 | 0.808917 | 2.45E-50 | -1.69E-46 |
MS.gene052606 | MS.gene72503 | 0.827128 | 1.86E-54 | -1.69E-46 |
MS.gene053887 | MS.gene72503 | 0.800051 | 1.73E-48 | -1.69E-46 |
MS.gene05483 | MS.gene72503 | 0.803275 | 3.77E-49 | -1.69E-46 |
MS.gene056224 | MS.gene72503 | 0.800355 | 1.50E-48 | -1.69E-46 |
MS.gene056590 | MS.gene72503 | 0.811914 | 5.52E-51 | -1.69E-46 |
MS.gene056591 | MS.gene72503 | 0.811882 | 5.61E-51 | -1.69E-46 |
MS.gene056748 | MS.gene72503 | 0.803109 | 4.08E-49 | -1.69E-46 |
MS.gene056856 | MS.gene72503 | 0.839934 | 1.18E-57 | -1.69E-46 |
MS.gene057261 | MS.gene72503 | 0.804047 | 2.61E-49 | -1.69E-46 |
MS.gene057547 | MS.gene72503 | 0.808198 | 3.48E-50 | -1.69E-46 |
MS.gene057768 | MS.gene72503 | 0.832544 | 8.90E-56 | -1.69E-46 |
MS.gene058382 | MS.gene72503 | 0.803165 | 3.97E-49 | -1.69E-46 |
MS.gene058603 | MS.gene72503 | 0.800052 | 1.73E-48 | -1.69E-46 |
MS.gene059685 | MS.gene72503 | 0.800059 | 1.72E-48 | -1.69E-46 |
MS.gene060405 | MS.gene72503 | 0.801606 | 8.32E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72503.t1 | MTR_4g036050 | 96.535 | 202 | 5 | 1 | 1 | 200 | 1 | 202 | 2.01e-143 | 397 |
MS.gene72503.t1 | MTR_4g036050 | 89.604 | 202 | 5 | 2 | 1 | 200 | 1 | 188 | 1.95e-128 | 359 |
MS.gene72503.t1 | MTR_4g036050 | 89.604 | 202 | 5 | 2 | 1 | 200 | 1 | 188 | 2.77e-128 | 358 |
MS.gene72503.t1 | MTR_4g036050 | 82.673 | 202 | 5 | 2 | 1 | 200 | 1 | 174 | 3.69e-115 | 325 |
MS.gene72503.t1 | MTR_7g075870 | 47.619 | 168 | 87 | 1 | 1 | 167 | 1 | 168 | 2.84e-45 | 149 |
MS.gene72503.t1 | MTR_7g075870 | 47.619 | 168 | 86 | 2 | 1 | 167 | 1 | 167 | 1.82e-43 | 144 |
MS.gene72503.t1 | MTR_8g033220 | 45.087 | 173 | 88 | 3 | 1 | 169 | 1 | 170 | 2.50e-42 | 142 |
MS.gene72503.t1 | MTR_8g033220 | 45.087 | 173 | 88 | 3 | 1 | 169 | 1 | 170 | 3.15e-42 | 142 |
MS.gene72503.t1 | MTR_3g452380 | 40.609 | 197 | 109 | 4 | 1 | 190 | 16 | 211 | 8.13e-42 | 141 |
MS.gene72503.t1 | MTR_8g066260 | 42.262 | 168 | 96 | 1 | 1 | 167 | 1 | 168 | 1.16e-40 | 138 |
MS.gene72503.t1 | MTR_8g097090 | 44.318 | 176 | 94 | 2 | 1 | 173 | 1 | 175 | 2.32e-40 | 137 |
MS.gene72503.t1 | MTR_7g075850 | 47.024 | 168 | 88 | 1 | 1 | 167 | 1 | 168 | 8.68e-40 | 136 |
MS.gene72503.t1 | MTR_7g016600 | 44.643 | 168 | 91 | 2 | 1 | 167 | 1 | 167 | 1.03e-38 | 133 |
MS.gene72503.t1 | MTR_5g046790 | 39.779 | 181 | 102 | 2 | 1 | 177 | 1 | 178 | 2.15e-38 | 131 |
MS.gene72503.t1 | MTR_3g084980 | 44.118 | 170 | 91 | 2 | 1 | 167 | 1 | 169 | 2.56e-38 | 132 |
MS.gene72503.t1 | MTR_8g033270 | 44.970 | 169 | 91 | 2 | 1 | 168 | 1 | 168 | 1.82e-37 | 130 |
MS.gene72503.t1 | MTR_2g009890 | 43.678 | 174 | 94 | 2 | 1 | 171 | 1 | 173 | 3.39e-37 | 130 |
MS.gene72503.t1 | MTR_6g015975 | 44.048 | 168 | 92 | 2 | 1 | 167 | 1 | 167 | 6.50e-37 | 129 |
MS.gene72503.t1 | MTR_4g109830 | 41.071 | 168 | 98 | 1 | 1 | 167 | 1 | 168 | 1.07e-36 | 128 |
MS.gene72503.t1 | MTR_5g031000 | 39.524 | 210 | 112 | 5 | 1 | 200 | 1 | 205 | 1.26e-36 | 127 |
MS.gene72503.t1 | MTR_5g031000 | 39.216 | 204 | 118 | 3 | 1 | 200 | 1 | 202 | 2.34e-36 | 127 |
MS.gene72503.t1 | MTR_2g017865 | 40.805 | 174 | 101 | 2 | 1 | 173 | 16 | 188 | 2.94e-36 | 127 |
MS.gene72503.t1 | MTR_4g102530 | 44.253 | 174 | 83 | 5 | 1 | 167 | 1 | 167 | 3.11e-36 | 126 |
MS.gene72503.t1 | MTR_4g109810 | 42.515 | 167 | 95 | 1 | 1 | 167 | 1 | 166 | 5.70e-36 | 126 |
MS.gene72503.t1 | MTR_3g005530 | 41.818 | 165 | 94 | 2 | 1 | 164 | 1 | 164 | 1.32e-35 | 125 |
MS.gene72503.t1 | MTR_1g038300 | 36.453 | 203 | 120 | 3 | 1 | 194 | 1 | 203 | 6.42e-35 | 123 |
MS.gene72503.t1 | MTR_8g087860 | 37.778 | 180 | 110 | 2 | 1 | 179 | 17 | 195 | 1.25e-34 | 123 |
MS.gene72503.t1 | MTR_7g016630 | 38.922 | 167 | 101 | 1 | 1 | 167 | 1 | 166 | 1.98e-33 | 120 |
MS.gene72503.t1 | MTR_6g464720 | 38.889 | 180 | 100 | 3 | 1 | 174 | 1 | 176 | 9.42e-33 | 118 |
MS.gene72503.t1 | MTR_5g066180 | 42.105 | 171 | 89 | 4 | 1 | 167 | 1 | 165 | 1.49e-31 | 114 |
MS.gene72503.t1 | MTR_1g053070 | 36.316 | 190 | 113 | 4 | 1 | 183 | 1 | 189 | 1.35e-29 | 110 |
MS.gene72503.t1 | MTR_3g088615 | 39.310 | 145 | 85 | 2 | 1 | 145 | 1 | 142 | 1.53e-29 | 108 |
MS.gene72503.t1 | MTR_1g101970 | 37.870 | 169 | 102 | 2 | 1 | 167 | 1 | 168 | 5.10e-29 | 107 |
MS.gene72503.t1 | MTR_5g046870 | 51.961 | 102 | 41 | 2 | 1 | 94 | 1 | 102 | 8.40e-28 | 101 |
MS.gene72503.t1 | MTR_0003s0590 | 38.235 | 170 | 101 | 2 | 1 | 167 | 1 | 169 | 1.68e-27 | 104 |
MS.gene72503.t1 | MTR_4g093970 | 36.782 | 174 | 106 | 2 | 1 | 171 | 27 | 199 | 2.21e-27 | 103 |
MS.gene72503.t1 | MTR_3g113030 | 35.465 | 172 | 105 | 4 | 1 | 170 | 1 | 168 | 1.28e-26 | 102 |
MS.gene72503.t1 | MTR_5g032520 | 39.766 | 171 | 95 | 4 | 1 | 167 | 1 | 167 | 2.77e-26 | 100 |
MS.gene72503.t1 | MTR_1g029670 | 36.986 | 146 | 87 | 2 | 1 | 145 | 1 | 142 | 8.21e-26 | 98.6 |
MS.gene72503.t1 | MTR_5g032150 | 39.181 | 171 | 96 | 4 | 1 | 167 | 1 | 167 | 4.45e-25 | 97.8 |
MS.gene72503.t1 | MTR_2g461710 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 5.65e-23 | 87.8 |
MS.gene72503.t1 | MTR_5g021270 | 33.333 | 168 | 105 | 3 | 1 | 164 | 1 | 165 | 1.80e-22 | 91.3 |
MS.gene72503.t1 | MTR_5g021270 | 33.333 | 168 | 105 | 3 | 1 | 164 | 1 | 165 | 2.02e-22 | 90.9 |
MS.gene72503.t1 | MTR_5g066960 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 3.82e-22 | 85.5 |
MS.gene72503.t1 | MTR_4g093030 | 50.575 | 87 | 28 | 1 | 1 | 72 | 1 | 87 | 3.21e-21 | 85.9 |
MS.gene72503.t1 | MTR_1g041615 | 40.206 | 97 | 53 | 1 | 16 | 107 | 20 | 116 | 1.80e-17 | 75.5 |
MS.gene72503.t1 | MTR_3g102570 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 2.85e-17 | 78.6 |
MS.gene72503.t1 | MTR_4g084740 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 3.58e-17 | 78.6 |
MS.gene72503.t1 | MTR_2g093190 | 28.111 | 217 | 122 | 6 | 2 | 200 | 9 | 209 | 1.02e-16 | 75.9 |
MS.gene72503.t1 | MTR_1g063160 | 39.583 | 96 | 55 | 2 | 1 | 96 | 1 | 93 | 4.65e-15 | 70.5 |
MS.gene72503.t1 | MTR_8g079502 | 36.538 | 104 | 55 | 2 | 1 | 104 | 1 | 93 | 4.99e-15 | 70.1 |
MS.gene72503.t1 | MTR_8g051580 | 56.364 | 55 | 24 | 0 | 1 | 55 | 1 | 55 | 6.67e-15 | 70.1 |
MS.gene72503.t1 | MTR_1g047550 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 1.17e-13 | 66.6 |
MS.gene72503.t1 | MTR_4g131030 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 2.66e-13 | 66.2 |
MS.gene72503.t1 | MTR_1g054265 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 2.67e-13 | 65.5 |
MS.gene72503.t1 | MTR_3g030770 | 29.730 | 185 | 105 | 7 | 2 | 168 | 9 | 186 | 2.93e-13 | 66.2 |
MS.gene72503.t1 | MTR_1g108510 | 29.730 | 185 | 105 | 7 | 2 | 168 | 9 | 186 | 3.02e-13 | 66.2 |
MS.gene72503.t1 | MTR_4g094632 | 31.148 | 122 | 80 | 2 | 1 | 122 | 1 | 118 | 4.89e-13 | 64.3 |
MS.gene72503.t1 | MTR_4g094638 | 35.417 | 96 | 59 | 2 | 1 | 96 | 1 | 93 | 1.07e-12 | 63.9 |
MS.gene72503.t1 | MTR_1g108580 | 26.484 | 219 | 123 | 6 | 2 | 200 | 9 | 209 | 1.84e-12 | 64.3 |
MS.gene72503.t1 | MTR_2g105290 | 35.632 | 87 | 55 | 1 | 1 | 87 | 11 | 96 | 2.77e-12 | 62.8 |
MS.gene72503.t1 | MTR_4g108720 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 3.03e-12 | 64.7 |
MS.gene72503.t1 | MTR_8g043650 | 27.632 | 152 | 85 | 4 | 2 | 132 | 9 | 156 | 3.19e-12 | 63.5 |
MS.gene72503.t1 | MTR_5g045560 | 36.905 | 84 | 51 | 2 | 1 | 84 | 8 | 89 | 3.63e-12 | 63.5 |
MS.gene72503.t1 | MTR_3g052920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 3.96e-12 | 63.2 |
MS.gene72503.t1 | MTR_8g086290 | 38.356 | 73 | 44 | 1 | 2 | 74 | 12 | 83 | 4.04e-12 | 62.4 |
MS.gene72503.t1 | MTR_1g106070 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 4.38e-12 | 62.4 |
MS.gene72503.t1 | MTR_3g080940 | 35.417 | 96 | 58 | 3 | 1 | 96 | 8 | 99 | 5.04e-12 | 62.8 |
MS.gene72503.t1 | MTR_2g030740 | 42.029 | 69 | 39 | 1 | 3 | 71 | 10 | 77 | 5.76e-12 | 62.8 |
MS.gene72503.t1 | MTR_1g105910 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 7.54e-12 | 62.8 |
MS.gene72503.t1 | MTR_2g085280 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.18e-11 | 62.0 |
MS.gene72503.t1 | MTR_2g085250 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.25e-11 | 62.0 |
MS.gene72503.t1 | MTR_3g052870 | 30.147 | 136 | 79 | 4 | 2 | 125 | 9 | 140 | 1.27e-11 | 61.6 |
MS.gene72503.t1 | MTR_8g046350 | 40.278 | 72 | 42 | 1 | 1 | 72 | 1 | 71 | 1.56e-11 | 60.5 |
MS.gene72503.t1 | MTR_1g077360 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.66e-11 | 61.6 |
MS.gene72503.t1 | MTR_1g105920 | 27.000 | 200 | 127 | 7 | 2 | 194 | 9 | 196 | 1.83e-11 | 61.6 |
MS.gene72503.t1 | MTR_1g012570 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 2.38e-11 | 61.2 |
MS.gene72503.t1 | MTR_5g041650 | 38.542 | 96 | 54 | 3 | 1 | 94 | 38 | 130 | 2.66e-11 | 62.0 |
MS.gene72503.t1 | MTR_7g028448 | 62.500 | 40 | 15 | 0 | 16 | 55 | 26 | 65 | 5.47e-11 | 59.3 |
MS.gene72503.t1 | MTR_4g036915 | 62.500 | 40 | 15 | 0 | 16 | 55 | 26 | 65 | 5.47e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72503.t1 | AT1G71692 | 60.190 | 211 | 73 | 4 | 1 | 200 | 1 | 211 | 4.63e-77 | 230 |
MS.gene72503.t1 | AT3G58780 | 44.253 | 174 | 95 | 2 | 1 | 173 | 16 | 188 | 5.47e-42 | 142 |
MS.gene72503.t1 | AT2G42830 | 43.750 | 176 | 97 | 2 | 1 | 175 | 16 | 190 | 5.59e-42 | 142 |
MS.gene72503.t1 | AT3G58780 | 44.253 | 174 | 95 | 2 | 1 | 173 | 22 | 194 | 6.33e-42 | 142 |
MS.gene72503.t1 | AT2G45660 | 45.349 | 172 | 88 | 3 | 1 | 169 | 1 | 169 | 1.76e-41 | 139 |
MS.gene72503.t1 | AT2G42830 | 44.382 | 178 | 95 | 3 | 1 | 175 | 16 | 192 | 9.50e-41 | 139 |
MS.gene72503.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 2 | 174 | 9.06e-40 | 135 |
MS.gene72503.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 1 | 173 | 1.03e-39 | 135 |
MS.gene72503.t1 | AT1G69120 | 40.331 | 181 | 101 | 2 | 1 | 177 | 1 | 178 | 1.13e-39 | 135 |
MS.gene72503.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 11 | 183 | 1.38e-39 | 135 |
MS.gene72503.t1 | AT1G24260 | 43.605 | 172 | 92 | 2 | 1 | 168 | 1 | 171 | 1.57e-39 | 135 |
MS.gene72503.t1 | AT2G45660 | 45.912 | 159 | 80 | 3 | 1 | 156 | 1 | 156 | 1.69e-39 | 133 |
MS.gene72503.t1 | AT1G24260 | 43.353 | 173 | 92 | 2 | 1 | 168 | 1 | 172 | 2.21e-39 | 135 |
MS.gene72503.t1 | AT1G69120 | 40.331 | 181 | 101 | 2 | 1 | 177 | 1 | 178 | 3.04e-39 | 135 |
MS.gene72503.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 27 | 199 | 3.35e-39 | 135 |
MS.gene72503.t1 | AT3G58780 | 42.529 | 174 | 91 | 2 | 1 | 173 | 16 | 181 | 2.89e-38 | 132 |
MS.gene72503.t1 | AT4G18960 | 41.379 | 174 | 100 | 2 | 2 | 174 | 18 | 190 | 2.89e-38 | 132 |
MS.gene72503.t1 | AT3G58780 | 38.889 | 198 | 96 | 2 | 1 | 173 | 16 | 213 | 5.57e-38 | 132 |
MS.gene72503.t1 | AT1G26310 | 37.569 | 181 | 108 | 2 | 1 | 177 | 1 | 180 | 8.45e-38 | 131 |
MS.gene72503.t1 | AT2G45650 | 44.444 | 171 | 86 | 3 | 1 | 167 | 1 | 166 | 1.04e-37 | 131 |
MS.gene72503.t1 | AT4G09960 | 41.279 | 172 | 99 | 2 | 1 | 171 | 1 | 171 | 1.06e-37 | 130 |
MS.gene72503.t1 | AT3G58780 | 47.917 | 144 | 73 | 2 | 1 | 143 | 16 | 158 | 1.16e-37 | 132 |
MS.gene72503.t1 | AT1G24260 | 43.478 | 161 | 85 | 2 | 1 | 156 | 1 | 160 | 3.22e-37 | 129 |
MS.gene72503.t1 | AT4G37940 | 41.212 | 165 | 94 | 3 | 1 | 164 | 1 | 163 | 2.13e-36 | 127 |
MS.gene72503.t1 | AT4G22950 | 40.936 | 171 | 100 | 1 | 1 | 171 | 1 | 170 | 2.36e-36 | 125 |
MS.gene72503.t1 | AT5G60910 | 40.351 | 171 | 95 | 2 | 1 | 167 | 1 | 168 | 2.56e-36 | 127 |
MS.gene72503.t1 | AT2G03710 | 42.857 | 168 | 95 | 1 | 1 | 167 | 1 | 168 | 3.10e-36 | 125 |
MS.gene72503.t1 | AT4G09960 | 41.573 | 178 | 98 | 3 | 1 | 173 | 96 | 272 | 6.41e-36 | 128 |
MS.gene72503.t1 | AT4G11880 | 41.026 | 156 | 92 | 0 | 1 | 156 | 1 | 156 | 1.79e-35 | 123 |
MS.gene72503.t1 | AT4G11880 | 41.026 | 156 | 92 | 0 | 1 | 156 | 1 | 156 | 1.79e-35 | 123 |
MS.gene72503.t1 | AT3G02310 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 1.80e-35 | 124 |
MS.gene72503.t1 | AT5G15800 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 2.04e-35 | 125 |
MS.gene72503.t1 | AT2G03710 | 42.857 | 168 | 95 | 1 | 1 | 167 | 1 | 168 | 2.50e-35 | 125 |
MS.gene72503.t1 | AT2G03710 | 42.857 | 168 | 95 | 1 | 1 | 167 | 1 | 168 | 2.63e-35 | 125 |
MS.gene72503.t1 | AT4G22950 | 40.449 | 178 | 105 | 1 | 1 | 178 | 1 | 177 | 3.01e-35 | 124 |
MS.gene72503.t1 | AT4G22950 | 40.449 | 178 | 105 | 1 | 1 | 178 | 1 | 177 | 3.01e-35 | 124 |
MS.gene72503.t1 | AT5G15800 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 3.09e-35 | 125 |
MS.gene72503.t1 | AT3G57230 | 40.854 | 164 | 87 | 4 | 1 | 160 | 1 | 158 | 8.57e-35 | 123 |
MS.gene72503.t1 | AT3G57230 | 40.854 | 164 | 87 | 4 | 1 | 160 | 1 | 158 | 8.57e-35 | 123 |
MS.gene72503.t1 | AT3G02310 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 1.22e-34 | 123 |
MS.gene72503.t1 | AT4G37940 | 42.667 | 150 | 83 | 3 | 1 | 149 | 1 | 148 | 1.51e-34 | 122 |
MS.gene72503.t1 | AT5G62165 | 39.645 | 169 | 100 | 2 | 1 | 168 | 1 | 168 | 6.25e-34 | 120 |
MS.gene72503.t1 | AT5G62165 | 39.645 | 169 | 100 | 2 | 1 | 168 | 1 | 168 | 6.25e-34 | 120 |
MS.gene72503.t1 | AT5G62165 | 39.645 | 169 | 100 | 2 | 1 | 168 | 1 | 168 | 6.25e-34 | 120 |
MS.gene72503.t1 | AT5G13790 | 36.364 | 209 | 117 | 3 | 1 | 200 | 1 | 202 | 2.60e-33 | 120 |
MS.gene72503.t1 | AT4G11880 | 41.916 | 167 | 97 | 0 | 1 | 167 | 1 | 167 | 3.17e-33 | 119 |
MS.gene72503.t1 | AT4G11880 | 41.916 | 167 | 97 | 0 | 1 | 167 | 1 | 167 | 3.17e-33 | 119 |
MS.gene72503.t1 | AT5G13790 | 37.143 | 210 | 117 | 5 | 1 | 200 | 1 | 205 | 6.24e-33 | 119 |
MS.gene72503.t1 | AT4G37940 | 41.892 | 148 | 83 | 3 | 1 | 147 | 1 | 146 | 1.10e-32 | 116 |
MS.gene72503.t1 | AT5G23260 | 37.234 | 188 | 115 | 2 | 1 | 187 | 1 | 186 | 1.24e-32 | 118 |
MS.gene72503.t1 | AT5G62165 | 39.490 | 157 | 93 | 2 | 1 | 156 | 1 | 156 | 1.56e-32 | 115 |
MS.gene72503.t1 | AT5G62165 | 39.490 | 157 | 93 | 2 | 1 | 156 | 1 | 156 | 1.56e-32 | 115 |
MS.gene72503.t1 | AT5G62165 | 39.490 | 157 | 93 | 2 | 1 | 156 | 1 | 156 | 1.56e-32 | 115 |
MS.gene72503.t1 | AT5G23260 | 37.313 | 201 | 122 | 3 | 1 | 200 | 17 | 214 | 2.21e-32 | 117 |
MS.gene72503.t1 | AT3G30260 | 40.789 | 152 | 87 | 2 | 1 | 150 | 1 | 151 | 2.63e-32 | 117 |
MS.gene72503.t1 | AT3G57230 | 41.259 | 143 | 83 | 1 | 1 | 143 | 1 | 142 | 3.07e-32 | 114 |
MS.gene72503.t1 | AT3G61120 | 42.262 | 168 | 93 | 3 | 1 | 167 | 1 | 165 | 3.62e-32 | 116 |
MS.gene72503.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 4.38e-32 | 114 |
MS.gene72503.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 4.38e-32 | 114 |
MS.gene72503.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 4.38e-32 | 114 |
MS.gene72503.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 4.38e-32 | 114 |
MS.gene72503.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 4.38e-32 | 114 |
MS.gene72503.t1 | AT2G14210 | 41.860 | 172 | 98 | 2 | 1 | 171 | 1 | 171 | 8.87e-32 | 115 |
MS.gene72503.t1 | AT2G14210 | 41.860 | 172 | 98 | 2 | 1 | 171 | 1 | 171 | 1.09e-31 | 115 |
MS.gene72503.t1 | AT5G51870 | 37.427 | 171 | 100 | 3 | 1 | 167 | 1 | 168 | 1.63e-30 | 111 |
MS.gene72503.t1 | AT5G51870 | 37.427 | 171 | 100 | 3 | 1 | 167 | 1 | 168 | 3.06e-30 | 111 |
MS.gene72503.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 4.37e-30 | 110 |
MS.gene72503.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 4.37e-30 | 110 |
MS.gene72503.t1 | AT5G51870 | 37.427 | 171 | 100 | 3 | 1 | 167 | 11 | 178 | 5.53e-30 | 110 |
MS.gene72503.t1 | AT5G23260 | 36.816 | 201 | 118 | 4 | 1 | 200 | 17 | 209 | 1.82e-29 | 110 |
MS.gene72503.t1 | AT5G51860 | 37.349 | 166 | 95 | 3 | 1 | 161 | 1 | 162 | 7.17e-29 | 107 |
MS.gene72503.t1 | AT5G51860 | 37.349 | 166 | 95 | 3 | 1 | 161 | 1 | 162 | 8.57e-29 | 107 |
MS.gene72503.t1 | AT2G22630 | 36.970 | 165 | 101 | 3 | 1 | 164 | 1 | 163 | 1.36e-28 | 107 |
MS.gene72503.t1 | AT2G22630 | 36.970 | 165 | 101 | 3 | 1 | 164 | 1 | 163 | 1.36e-28 | 107 |
MS.gene72503.t1 | AT5G51870 | 38.667 | 150 | 85 | 3 | 1 | 146 | 1 | 147 | 1.95e-28 | 105 |
MS.gene72503.t1 | AT5G23260 | 40.000 | 150 | 87 | 2 | 1 | 149 | 1 | 148 | 4.86e-28 | 105 |
MS.gene72503.t1 | AT5G51870 | 38.667 | 150 | 85 | 3 | 1 | 146 | 24 | 170 | 5.02e-28 | 104 |
MS.gene72503.t1 | AT3G57390 | 35.196 | 179 | 107 | 2 | 1 | 171 | 1 | 178 | 7.45e-26 | 99.8 |
MS.gene72503.t1 | AT3G57390 | 35.196 | 179 | 107 | 2 | 1 | 171 | 1 | 178 | 1.41e-25 | 99.8 |
MS.gene72503.t1 | AT5G62165 | 58.667 | 75 | 30 | 1 | 1 | 75 | 1 | 74 | 1.47e-25 | 95.9 |
MS.gene72503.t1 | AT5G65070 | 34.118 | 170 | 99 | 4 | 1 | 167 | 1 | 160 | 2.46e-25 | 97.8 |
MS.gene72503.t1 | AT2G22540 | 37.870 | 169 | 101 | 3 | 1 | 167 | 1 | 167 | 3.08e-25 | 98.6 |
MS.gene72503.t1 | AT2G22540 | 37.870 | 169 | 101 | 3 | 1 | 167 | 1 | 167 | 3.08e-25 | 98.6 |
MS.gene72503.t1 | AT4G24540 | 37.441 | 211 | 105 | 8 | 1 | 191 | 1 | 204 | 3.79e-25 | 97.8 |
MS.gene72503.t1 | AT5G20240 | 35.374 | 147 | 90 | 2 | 1 | 146 | 1 | 143 | 3.90e-25 | 97.4 |
MS.gene72503.t1 | AT5G20240 | 35.616 | 146 | 89 | 2 | 1 | 145 | 1 | 142 | 1.12e-24 | 94.7 |
MS.gene72503.t1 | AT5G65050 | 33.908 | 174 | 102 | 3 | 1 | 171 | 1 | 164 | 3.25e-24 | 94.4 |
MS.gene72503.t1 | AT5G65060 | 31.959 | 194 | 115 | 5 | 1 | 191 | 1 | 180 | 3.27e-24 | 94.7 |
MS.gene72503.t1 | AT2G22540 | 39.521 | 167 | 96 | 3 | 1 | 167 | 1 | 162 | 5.02e-24 | 95.5 |
MS.gene72503.t1 | AT5G65050 | 33.908 | 174 | 102 | 3 | 1 | 171 | 1 | 164 | 1.14e-23 | 93.6 |
MS.gene72503.t1 | AT5G65070 | 31.959 | 194 | 102 | 4 | 1 | 167 | 1 | 191 | 1.17e-23 | 94.4 |
MS.gene72503.t1 | AT5G65060 | 33.529 | 170 | 100 | 4 | 1 | 167 | 1 | 160 | 3.10e-23 | 92.4 |
MS.gene72503.t1 | AT5G10140 | 32.692 | 156 | 98 | 1 | 1 | 156 | 1 | 149 | 7.06e-23 | 90.9 |
MS.gene72503.t1 | AT5G65070 | 34.228 | 149 | 85 | 4 | 1 | 146 | 1 | 139 | 1.68e-22 | 89.0 |
MS.gene72503.t1 | AT1G31140 | 36.913 | 149 | 91 | 2 | 1 | 146 | 1 | 149 | 1.92e-22 | 90.9 |
MS.gene72503.t1 | AT1G31140 | 36.735 | 147 | 92 | 1 | 1 | 146 | 1 | 147 | 2.05e-22 | 90.5 |
MS.gene72503.t1 | AT5G65070 | 30.693 | 202 | 110 | 4 | 1 | 175 | 1 | 199 | 2.40e-22 | 90.5 |
MS.gene72503.t1 | AT5G65050 | 33.333 | 174 | 92 | 3 | 1 | 171 | 1 | 153 | 2.46e-22 | 89.7 |
MS.gene72503.t1 | AT5G65080 | 32.317 | 164 | 98 | 4 | 1 | 161 | 8 | 161 | 3.14e-22 | 89.7 |
MS.gene72503.t1 | AT5G65050 | 34.161 | 161 | 93 | 3 | 1 | 158 | 1 | 151 | 7.62e-22 | 88.2 |
MS.gene72503.t1 | AT3G54340 | 35.754 | 179 | 99 | 6 | 1 | 172 | 1 | 170 | 1.34e-21 | 89.0 |
MS.gene72503.t1 | AT5G10140 | 33.562 | 146 | 90 | 1 | 1 | 146 | 1 | 139 | 1.35e-21 | 87.4 |
MS.gene72503.t1 | AT5G65060 | 32.584 | 178 | 96 | 4 | 1 | 175 | 1 | 157 | 1.51e-21 | 87.4 |
MS.gene72503.t1 | AT5G10140 | 33.562 | 146 | 90 | 1 | 1 | 146 | 1 | 139 | 2.08e-21 | 87.4 |
MS.gene72503.t1 | AT5G10140 | 33.562 | 146 | 90 | 1 | 1 | 146 | 1 | 139 | 2.59e-21 | 87.4 |
MS.gene72503.t1 | AT1G77080 | 34.706 | 170 | 98 | 4 | 1 | 167 | 1 | 160 | 7.93e-21 | 85.5 |
MS.gene72503.t1 | AT1G77080 | 34.270 | 178 | 104 | 4 | 1 | 175 | 1 | 168 | 1.04e-20 | 85.5 |
MS.gene72503.t1 | AT1G77080 | 34.706 | 170 | 98 | 4 | 1 | 167 | 1 | 160 | 1.62e-20 | 84.7 |
MS.gene72503.t1 | AT5G65070 | 32.308 | 195 | 101 | 7 | 1 | 167 | 1 | 192 | 3.66e-20 | 85.1 |
MS.gene72503.t1 | AT1G77080 | 30.693 | 202 | 106 | 5 | 1 | 175 | 1 | 195 | 8.12e-19 | 81.3 |
MS.gene72503.t1 | AT1G77080 | 33.146 | 178 | 102 | 5 | 1 | 175 | 1 | 164 | 7.45e-18 | 78.2 |
MS.gene72503.t1 | AT5G65080 | 52.542 | 59 | 28 | 0 | 1 | 59 | 8 | 66 | 4.65e-16 | 73.6 |
MS.gene72503.t1 | AT1G77980 | 44.595 | 74 | 41 | 0 | 1 | 74 | 1 | 74 | 5.25e-16 | 75.1 |
MS.gene72503.t1 | AT1G77080 | 33.333 | 159 | 89 | 5 | 1 | 156 | 1 | 145 | 1.18e-15 | 71.2 |
MS.gene72503.t1 | AT1G22130 | 42.667 | 75 | 43 | 0 | 1 | 75 | 1 | 75 | 1.85e-15 | 73.9 |
MS.gene72503.t1 | AT1G72350 | 47.887 | 71 | 34 | 1 | 2 | 72 | 43 | 110 | 1.41e-14 | 70.1 |
MS.gene72503.t1 | AT4G37435 | 37.168 | 113 | 66 | 3 | 1 | 111 | 1 | 110 | 5.20e-14 | 67.8 |
MS.gene72503.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 2.68e-13 | 67.0 |
MS.gene72503.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 2.68e-13 | 67.0 |
MS.gene72503.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 2.68e-13 | 67.0 |
MS.gene72503.t1 | AT1G77950 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 2.68e-13 | 67.0 |
MS.gene72503.t1 | AT2G34440 | 41.667 | 72 | 41 | 1 | 1 | 72 | 1 | 71 | 2.81e-13 | 65.5 |
MS.gene72503.t1 | AT2G24840 | 42.254 | 71 | 40 | 1 | 1 | 71 | 62 | 131 | 2.89e-13 | 67.0 |
MS.gene72503.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.17e-12 | 65.9 |
MS.gene72503.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.17e-12 | 65.9 |
MS.gene72503.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.17e-12 | 65.9 |
MS.gene72503.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.35e-12 | 65.9 |
MS.gene72503.t1 | AT1G01530 | 48.276 | 58 | 30 | 0 | 1 | 58 | 6 | 63 | 1.35e-12 | 64.7 |
MS.gene72503.t1 | AT3G66656 | 46.552 | 58 | 31 | 0 | 1 | 58 | 1 | 58 | 1.82e-12 | 63.5 |
MS.gene72503.t1 | AT1G18750 | 31.469 | 143 | 81 | 3 | 1 | 143 | 1 | 126 | 3.80e-12 | 64.7 |
MS.gene72503.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 6.12e-12 | 63.9 |
MS.gene72503.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 6.48e-12 | 63.9 |
MS.gene72503.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.62e-11 | 62.8 |
MS.gene72503.t1 | AT4G36590 | 43.478 | 69 | 38 | 1 | 2 | 70 | 7 | 74 | 1.90e-11 | 61.6 |
MS.gene72503.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 2.25e-11 | 62.4 |
Find 48 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTGTTTGGAGGAGGATT+AGG | 0.243362 | 4.1:+64162613 | MS.gene72503:CDS |
CGTGCTTCAGTTACAGCTTC+AGG | 0.305131 | 4.1:-64159506 | None:intergenic |
GTGCTTTGCGATGCTGAAAT+TGG | 0.317759 | 4.1:+64158949 | MS.gene72503:CDS |
TTGAAAAGAACCTCGAAATC+TGG | 0.328582 | 4.1:+64162665 | MS.gene72503:CDS |
TAACCTTATCCCTCAAAGTT+TGG | 0.340993 | 4.1:-64162869 | None:intergenic |
ATTATTGGCAGGTATTTGTT+TGG | 0.358105 | 4.1:+64162601 | MS.gene72503:intron |
ATTTGTTTGGAGGAGGATTA+GGG | 0.367328 | 4.1:+64162614 | MS.gene72503:CDS |
AAATAAGTATCTCCATGATT+TGG | 0.377590 | 4.1:+64165974 | MS.gene72503:CDS |
AATCCAAACTTTGAGGGATA+AGG | 0.388651 | 4.1:+64162866 | MS.gene72503:CDS |
TGGAGGAGGATTAGGGACTA+TGG | 0.415641 | 4.1:+64162621 | MS.gene72503:CDS |
ATTTAAGGAGGGAACACTTA+AGG | 0.425708 | 4.1:+64165947 | MS.gene72503:intron |
ATGAATATGTTACCAAATCA+TGG | 0.430713 | 4.1:-64165986 | None:intergenic |
GGCAGGTATTTGTTTGGAGG+AGG | 0.434879 | 4.1:+64162607 | MS.gene72503:intron |
TTCCCACTAATTATACAAGA+TGG | 0.434963 | 4.1:+64166158 | MS.gene72503:CDS |
AAAGTCACTTGCCTGTGCAC+TGG | 0.436750 | 4.1:-64158880 | None:intergenic |
AGAGATCGATACCTTGCAAA+AGG | 0.454575 | 4.1:+64161964 | MS.gene72503:CDS |
ATCCCATCTTGTATAATTAG+TGG | 0.454812 | 4.1:-64166161 | None:intergenic |
AAGTCACTTGCCTGTGCACT+GGG | 0.471642 | 4.1:-64158879 | None:intergenic |
ATTGGCAGGTATTTGTTTGG+AGG | 0.478009 | 4.1:+64162604 | MS.gene72503:intron |
ACTTTCTGTAAGCGCCGAGC+GGG | 0.485647 | 4.1:+64158898 | MS.gene72503:CDS |
CACAAGAAATCCAAACTTTG+AGG | 0.490472 | 4.1:+64162859 | MS.gene72503:CDS |
CTCTATGAACTCGCCACCAA+AGG | 0.491747 | 4.1:+64159000 | MS.gene72503:CDS |
CTTCTCTATTAGCCCTTGCA+TGG | 0.492434 | 4.1:-64159456 | None:intergenic |
CATTATACATCCAGATTTCG+AGG | 0.493442 | 4.1:-64162675 | None:intergenic |
ATACCTTGCAAAAGGGTCTC+AGG | 0.496187 | 4.1:+64161972 | MS.gene72503:CDS |
AACGAAGTATCAGTAGCAAA+TGG | 0.506323 | 4.1:-64166137 | None:intergenic |
CCTTCTTCAAAAGCCCCGCT+CGG | 0.520394 | 4.1:-64158912 | None:intergenic |
TCCCACTAATTATACAAGAT+GGG | 0.527346 | 4.1:+64166159 | MS.gene72503:CDS |
TTCATAGAGCTTTCCATGAG+CGG | 0.532053 | 4.1:-64158986 | None:intergenic |
AATCGACATGGCTCGCGGGA+AGG | 0.534307 | 4.1:+64158834 | None:intergenic |
ACAAGAAATCCAAACTTTGA+GGG | 0.536382 | 4.1:+64162860 | MS.gene72503:CDS |
GTATAATGTTCGCTCAATGA+AGG | 0.550286 | 4.1:+64162690 | MS.gene72503:CDS |
TCTATGAACTCGCCACCAAA+GGG | 0.554348 | 4.1:+64159001 | MS.gene72503:CDS |
TCCCATCTTGTATAATTAGT+GGG | 0.555246 | 4.1:-64166160 | None:intergenic |
GGATTGAGAACCCAGTGCAC+AGG | 0.556607 | 4.1:+64158869 | MS.gene72503:CDS |
ATGAAATGAAGAACCATGCA+AGG | 0.564040 | 4.1:+64159443 | MS.gene72503:intron |
TCATATCTAGGATGCTAAAG+AGG | 0.576504 | 4.1:+64161922 | MS.gene72503:intron |
GAGATCGATACCTTGCAAAA+GGG | 0.585390 | 4.1:+64161965 | MS.gene72503:CDS |
AGGATTAGGGACTATGGCAA+TGG | 0.589394 | 4.1:+64162627 | MS.gene72503:CDS |
AAAAGAGACATACCCTTTGG+TGG | 0.593726 | 4.1:-64159013 | None:intergenic |
CTCGCGGGAAGGTTCAGCTA+AGG | 0.601343 | 4.1:+64158845 | MS.gene72503:CDS |
GCGGGAAGGTTCAGCTAAGG+AGG | 0.602356 | 4.1:+64158848 | MS.gene72503:CDS |
GATCTCTTGCTTGAGCACAT+TGG | 0.611486 | 4.1:-64161948 | None:intergenic |
CTTTCTGTAAGCGCCGAGCG+GGG | 0.616522 | 4.1:+64158899 | MS.gene72503:CDS |
TGAAATGAAGAACCATGCAA+GGG | 0.639061 | 4.1:+64159444 | MS.gene72503:intron |
GACTTTCTGTAAGCGCCGAG+CGG | 0.650769 | 4.1:+64158897 | MS.gene72503:CDS |
TAAGGAGGGAACACTTAAGG+CGG | 0.674035 | 4.1:+64165950 | MS.gene72503:intron |
AAGTACTTGAAGTTCACACG+AGG | 0.761674 | 4.1:+64159476 | MS.gene72503:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 64158841 | 64166196 | 64158841 | ID=MS.gene72503 |
chr4.1 | mRNA | 64158841 | 64166196 | 64158841 | ID=MS.gene72503.t1;Parent=MS.gene72503 |
chr4.1 | exon | 64158841 | 64159022 | 64158841 | ID=MS.gene72503.t1.exon1;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64158841 | 64159022 | 64158841 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
chr4.1 | exon | 64159454 | 64159535 | 64159454 | ID=MS.gene72503.t1.exon2;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64159454 | 64159535 | 64159454 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
chr4.1 | exon | 64161932 | 64161993 | 64161932 | ID=MS.gene72503.t1.exon3;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64161932 | 64161993 | 64161932 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
chr4.1 | exon | 64162612 | 64162711 | 64162612 | ID=MS.gene72503.t1.exon4;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64162612 | 64162711 | 64162612 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
chr4.1 | exon | 64162846 | 64162887 | 64162846 | ID=MS.gene72503.t1.exon5;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64162846 | 64162887 | 64162846 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
chr4.1 | exon | 64165954 | 64165995 | 64165954 | ID=MS.gene72503.t1.exon6;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64165954 | 64165995 | 64165954 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
chr4.1 | exon | 64166104 | 64166196 | 64166104 | ID=MS.gene72503.t1.exon7;Parent=MS.gene72503.t1 |
chr4.1 | CDS | 64166104 | 64166196 | 64166104 | ID=cds.MS.gene72503.t1;Parent=MS.gene72503.t1 |
Gene Sequence |
Protein sequence |