Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72606.t1 | XP_013452720.1 | 93.4 | 392 | 24 | 2 | 1 | 391 | 1 | 391 | 3.30E-205 | 724.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72606.t1 | Q9C942 | 34.3 | 283 | 175 | 8 | 118 | 391 | 44 | 324 | 9.9e-33 | 142.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72606.t1 | A0A072UCF9 | 93.4 | 392 | 24 | 2 | 1 | 391 | 1 | 391 | 2.4e-205 | 724.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065143 | MS.gene72606 | PPI |
| MS.gene65684 | MS.gene72606 | PPI |
| MS.gene76310 | MS.gene72606 | PPI |
| MS.gene72606 | MS.gene053811 | PPI |
| MS.gene96656 | MS.gene72606 | PPI |
| MS.gene029411 | MS.gene72606 | PPI |
| MS.gene72606 | MS.gene71828 | PPI |
| MS.gene63039 | MS.gene72606 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72606.t1 | MTR_6g071475 | 96.173 | 392 | 13 | 2 | 1 | 391 | 1 | 391 | 0.0 | 773 |
| MS.gene72606.t1 | MTR_3g109870 | 50.325 | 308 | 122 | 5 | 91 | 391 | 72 | 355 | 4.42e-101 | 304 |
| MS.gene72606.t1 | MTR_4g089170 | 36.620 | 284 | 166 | 9 | 118 | 390 | 43 | 323 | 4.09e-43 | 153 |
| MS.gene72606.t1 | MTR_6g025610 | 36.429 | 280 | 159 | 9 | 122 | 388 | 52 | 325 | 3.94e-42 | 150 |
| MS.gene72606.t1 | MTR_6g018490 | 35.842 | 279 | 162 | 8 | 122 | 388 | 62 | 335 | 2.62e-41 | 149 |
| MS.gene72606.t1 | MTR_1g088470 | 35.836 | 293 | 161 | 11 | 115 | 391 | 11 | 292 | 1.33e-39 | 144 |
| MS.gene72606.t1 | MTR_1g110670 | 34.028 | 288 | 180 | 8 | 112 | 390 | 71 | 357 | 6.51e-38 | 140 |
| MS.gene72606.t1 | MTR_7g007260 | 32.635 | 334 | 195 | 11 | 81 | 388 | 7 | 336 | 1.38e-36 | 136 |
| MS.gene72606.t1 | MTR_7g108770 | 34.247 | 292 | 178 | 9 | 106 | 388 | 2 | 288 | 5.91e-36 | 134 |
| MS.gene72606.t1 | MTR_7g007260 | 31.024 | 332 | 191 | 9 | 81 | 388 | 7 | 324 | 1.28e-35 | 133 |
| MS.gene72606.t1 | MTR_7g007260 | 31.627 | 332 | 188 | 10 | 81 | 388 | 7 | 323 | 5.13e-35 | 132 |
| MS.gene72606.t1 | MTR_4g127220 | 33.916 | 286 | 172 | 8 | 118 | 391 | 35 | 315 | 6.56e-35 | 131 |
| MS.gene72606.t1 | MTR_5g056550 | 34.483 | 290 | 172 | 12 | 114 | 390 | 107 | 391 | 3.25e-34 | 131 |
| MS.gene72606.t1 | MTR_1g115535 | 31.655 | 278 | 179 | 6 | 122 | 390 | 18 | 293 | 6.66e-33 | 125 |
| MS.gene72606.t1 | MTR_1g115535 | 31.655 | 278 | 179 | 6 | 122 | 390 | 22 | 297 | 7.30e-33 | 125 |
| MS.gene72606.t1 | MTR_6g084420 | 29.969 | 327 | 204 | 10 | 85 | 389 | 14 | 337 | 4.59e-31 | 121 |
| MS.gene72606.t1 | MTR_5g056550 | 31.707 | 287 | 151 | 10 | 114 | 390 | 107 | 358 | 1.87e-25 | 106 |
| MS.gene72606.t1 | MTR_1g095110 | 30.634 | 284 | 173 | 10 | 120 | 387 | 37 | 312 | 8.21e-24 | 101 |
| MS.gene72606.t1 | MTR_5g056550 | 35.246 | 122 | 73 | 4 | 114 | 230 | 107 | 227 | 6.26e-12 | 65.5 |
| MS.gene72606.t1 | MTR_5g056550 | 35.484 | 124 | 70 | 5 | 114 | 230 | 107 | 227 | 8.02e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72606.t1 | AT1G73480 | 61.990 | 392 | 124 | 6 | 14 | 391 | 83 | 463 | 1.93e-167 | 477 |
| MS.gene72606.t1 | AT1G18360 | 68.106 | 301 | 93 | 2 | 94 | 391 | 82 | 382 | 5.96e-149 | 427 |
| MS.gene72606.t1 | AT5G11650 | 60.727 | 275 | 108 | 0 | 117 | 391 | 105 | 379 | 5.48e-124 | 363 |
| MS.gene72606.t1 | AT5G11650 | 60.104 | 193 | 77 | 0 | 117 | 309 | 105 | 297 | 1.73e-83 | 257 |
| MS.gene72606.t1 | AT2G39420 | 36.918 | 279 | 165 | 7 | 122 | 391 | 19 | 295 | 7.35e-43 | 152 |
| MS.gene72606.t1 | AT2G39410 | 35.252 | 278 | 169 | 5 | 122 | 390 | 19 | 294 | 7.37e-40 | 144 |
| MS.gene72606.t1 | AT5G16120 | 34.277 | 318 | 185 | 11 | 88 | 389 | 29 | 338 | 2.06e-39 | 144 |
| MS.gene72606.t1 | AT5G16120 | 34.277 | 318 | 185 | 11 | 88 | 389 | 29 | 338 | 2.06e-39 | 144 |
| MS.gene72606.t1 | AT5G16120 | 34.277 | 318 | 185 | 11 | 88 | 389 | 47 | 356 | 2.16e-39 | 144 |
| MS.gene72606.t1 | AT1G11090 | 34.471 | 293 | 162 | 13 | 117 | 390 | 33 | 314 | 3.21e-39 | 143 |
| MS.gene72606.t1 | AT5G16120 | 34.385 | 317 | 184 | 11 | 88 | 388 | 61 | 369 | 3.63e-39 | 144 |
| MS.gene72606.t1 | AT1G52760 | 33.217 | 286 | 174 | 8 | 118 | 391 | 44 | 324 | 1.44e-37 | 139 |
| MS.gene72606.t1 | AT2G39400 | 33.571 | 280 | 175 | 5 | 120 | 390 | 11 | 288 | 2.88e-37 | 137 |
| MS.gene72606.t1 | AT3G55180 | 34.286 | 280 | 170 | 9 | 122 | 390 | 13 | 289 | 1.55e-34 | 130 |
| MS.gene72606.t1 | AT5G14980 | 30.797 | 276 | 182 | 6 | 123 | 390 | 41 | 315 | 1.85e-31 | 122 |
| MS.gene72606.t1 | AT3G55190 | 31.488 | 289 | 172 | 9 | 120 | 391 | 17 | 296 | 1.07e-30 | 120 |
| MS.gene72606.t1 | AT1G77420 | 32.203 | 354 | 211 | 13 | 63 | 391 | 30 | 379 | 1.10e-29 | 118 |
| MS.gene72606.t1 | AT3G62860 | 31.900 | 279 | 178 | 7 | 122 | 391 | 17 | 292 | 2.69e-29 | 116 |
| MS.gene72606.t1 | AT2G47630 | 31.786 | 280 | 179 | 7 | 122 | 391 | 17 | 294 | 4.59e-29 | 116 |
| MS.gene72606.t1 | AT3G62860 | 31.799 | 239 | 153 | 5 | 161 | 391 | 13 | 249 | 1.20e-26 | 108 |
| MS.gene72606.t1 | AT2G47630 | 31.799 | 239 | 153 | 5 | 161 | 391 | 13 | 249 | 5.85e-26 | 106 |
| MS.gene72606.t1 | AT2G47630 | 31.933 | 238 | 152 | 5 | 161 | 390 | 33 | 268 | 6.30e-26 | 107 |
| MS.gene72606.t1 | AT5G19290 | 29.496 | 278 | 186 | 8 | 122 | 390 | 40 | 316 | 1.07e-25 | 106 |
| MS.gene72606.t1 | AT2G39400 | 28.372 | 215 | 146 | 4 | 120 | 328 | 11 | 223 | 3.27e-17 | 80.9 |
| MS.gene72606.t1 | AT2G39410 | 44.156 | 77 | 42 | 1 | 122 | 197 | 19 | 95 | 6.53e-12 | 62.8 |
Find 78 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGCACCACCGCGCCTTTC+CGG | 0.142261 | 6.4:+48882796 | None:intergenic |
| GCTAATGGCTACAAGGTTTA+TGG | 0.174876 | 6.4:-48881342 | MS.gene72606:CDS |
| TCAGTGATATCCTCTCTTTC+AGG | 0.185889 | 6.4:+48877448 | None:intergenic |
| GCTATGCAAGCTTCAATCTT+TGG | 0.224210 | 6.4:+48878535 | None:intergenic |
| GGTCTTCCATGTTTCTGTTA+TGG | 0.268098 | 6.4:-48878691 | MS.gene72606:CDS |
| AGAAATGTTTGAGGGAATAT+TGG | 0.288201 | 6.4:-48882656 | MS.gene72606:CDS |
| TGAGGAGGGAATTGGCTATA+AGG | 0.289591 | 6.4:-48882701 | MS.gene72606:CDS |
| TGATCATGCAGTTGCTGATT+TGG | 0.292356 | 6.4:-48879354 | MS.gene72606:intron |
| ACCCTTCTTCGCCCTCTAAA+TGG | 0.298051 | 6.4:+48882876 | None:intergenic |
| AGGCGCGGTGGTGCGCGTTC+CGG | 0.319890 | 6.4:-48882790 | MS.gene72606:CDS |
| ATTGGCTATAAGGAGAGTTT+TGG | 0.320255 | 6.4:-48882691 | MS.gene72606:CDS |
| GAAAATTGTATCACCCCTTT+TGG | 0.323417 | 6.4:+48882623 | None:intergenic |
| CTCCTCTTTCTGTTAAGATT+AGG | 0.351584 | 6.4:-48882587 | MS.gene72606:intron |
| TTCCATGGCACAATCTTTGC+CGG | 0.361074 | 6.4:+48882771 | None:intergenic |
| GTTAATATCAGCTATGGTTA+TGG | 0.380117 | 6.4:-48882910 | MS.gene72606:CDS |
| CTATGCAAGCTTCAATCTTT+GGG | 0.383116 | 6.4:+48878536 | None:intergenic |
| GCCTCCGGGTCTCGAGAAAC+TGG | 0.383816 | 6.4:+48877724 | None:intergenic |
| GCAAAGCAGCTGAATGCTAA+TGG | 0.387246 | 6.4:-48881357 | MS.gene72606:CDS |
| CATATGATCCAACACCTTCA+TGG | 0.403235 | 6.4:+48882725 | None:intergenic |
| CTAATGGCTACAAGGTTTAT+GGG | 0.405878 | 6.4:-48881341 | MS.gene72606:CDS |
| ACAAGGTTTATGGGATGGAT+TGG | 0.430990 | 6.4:-48881332 | MS.gene72606:CDS |
| TCATATGATGAGGAGGGAAT+TGG | 0.431514 | 6.4:-48882709 | MS.gene72606:CDS |
| AAGATTGAAGCTTGCATAGC+TGG | 0.434921 | 6.4:-48878532 | MS.gene72606:CDS |
| AGGTGCAGCAATTACTCTTA+AGG | 0.440332 | 6.4:-48878659 | MS.gene72606:intron |
| GGACTTGTTATTCTTATGCA+TGG | 0.445658 | 6.4:-48881508 | MS.gene72606:CDS |
| TACCTAATCTTAACAGAAAG+AGG | 0.448951 | 6.4:+48882585 | None:intergenic |
| TACCATTTAGAGGGCGAAGA+AGG | 0.458553 | 6.4:-48882878 | MS.gene72606:CDS |
| TGTAATTCAGCATACAAGAA+AGG | 0.463542 | 6.4:-48877751 | MS.gene72606:CDS |
| GTGCCGTGTAGAACAAGAAA+TGG | 0.464730 | 6.4:+48877583 | None:intergenic |
| TTAGGTCATGGTGGTAGTGA+TGG | 0.466999 | 6.4:-48879401 | MS.gene72606:intron |
| TGTTGGTATGGTTGCCATGA+AGG | 0.467747 | 6.4:-48882739 | MS.gene72606:CDS |
| GAAGAGTGGTGGTGTTGGTA+TGG | 0.475481 | 6.4:-48882751 | MS.gene72606:CDS |
| TTCTGTTATGGACACTCGAC+AGG | 0.497053 | 6.4:-48878679 | MS.gene72606:CDS |
| TTTCTTGTTCTACACGGCAC+TGG | 0.504024 | 6.4:-48877580 | MS.gene72606:CDS |
| TATTTCGCGATGAGAGCCTC+CGG | 0.510804 | 6.4:+48877709 | None:intergenic |
| GTAATTCAGCATACAAGAAA+GGG | 0.513673 | 6.4:-48877750 | MS.gene72606:CDS |
| GGCAGTAGTAATGATGCTAT+TGG | 0.515019 | 6.4:+48877784 | None:intergenic |
| CGCGAAATATTCAGACCCAT+TGG | 0.521881 | 6.4:-48877695 | MS.gene72606:CDS |
| AAAAGTATCAAATTGTATGA+AGG | 0.521940 | 6.4:-48877496 | MS.gene72606:CDS |
| AAGGTTATAACTGAAAATCC+TGG | 0.529580 | 6.4:-48878712 | MS.gene72606:CDS |
| GCGATCCTGTGCATACCAAT+GGG | 0.530438 | 6.4:+48877680 | None:intergenic |
| CAACTGCATGATCAAGAGAA+TGG | 0.540138 | 6.4:+48879363 | None:intergenic |
| AGCGATCCTGTGCATACCAA+TGG | 0.540907 | 6.4:+48877679 | None:intergenic |
| ATGTTGATGAGAAATGTTTG+AGG | 0.547127 | 6.4:-48882665 | MS.gene72606:CDS |
| TGGCTACAAGGTTTATGGGA+TGG | 0.547371 | 6.4:-48881337 | MS.gene72606:CDS |
| GTTTATGGGATGGATTGGAT+TGG | 0.548054 | 6.4:-48881327 | MS.gene72606:intron |
| CCAACACCACCACTCTTCCA+TGG | 0.554560 | 6.4:+48882756 | None:intergenic |
| TATGGTTGCCATGAAGGTGT+TGG | 0.560080 | 6.4:-48882733 | MS.gene72606:CDS |
| GAAGTCTCAACTCCAACTGC+AGG | 0.560499 | 6.4:+48878493 | None:intergenic |
| TCAGACCCATTGGTATGCAC+AGG | 0.565095 | 6.4:-48877685 | MS.gene72606:CDS |
| GCTGAATGCTAATGGCTACA+AGG | 0.567854 | 6.4:-48881349 | MS.gene72606:CDS |
| TCACTGAAGATATAATTCAA+TGG | 0.568890 | 6.4:-48877432 | MS.gene72606:CDS |
| ACAGAAAATATTCATCGAGA+AGG | 0.571510 | 6.4:-48878731 | MS.gene72606:intron |
| CCATGGAAGAGTGGTGGTGT+TGG | 0.574587 | 6.4:-48882756 | MS.gene72606:CDS |
| GTTGCCAGTTTCTCGAGACC+CGG | 0.579629 | 6.4:-48877728 | MS.gene72606:CDS |
| GGATCGCTTAGAGTACGAAC+CGG | 0.580974 | 6.4:-48877664 | MS.gene72606:CDS |
| TGCATGGTCTTAATGAACAC+AGG | 0.585119 | 6.4:-48881492 | MS.gene72606:intron |
| ACCATTTAGAGGGCGAAGAA+GGG | 0.585834 | 6.4:-48882877 | MS.gene72606:CDS |
| ACATTCACATCACCTGCAGT+TGG | 0.588536 | 6.4:-48878505 | MS.gene72606:CDS |
| AGTGTTGTCATCATCATCAC+CGG | 0.591129 | 6.4:-48882815 | MS.gene72606:CDS |
| ATTTCGCGATGAGAGCCTCC+GGG | 0.593930 | 6.4:+48877710 | None:intergenic |
| TGTTGATGAGAAATGTTTGA+GGG | 0.594287 | 6.4:-48882664 | MS.gene72606:CDS |
| GGTGGTAGTGATGGTTTGCA+TGG | 0.601763 | 6.4:-48879392 | MS.gene72606:CDS |
| TGTTGGATCATATGATGAGG+AGG | 0.602319 | 6.4:-48882716 | MS.gene72606:CDS |
| GATTCGAAGAATCTCATAGC+CGG | 0.604669 | 6.4:+48877645 | None:intergenic |
| TAACAGAAACATGGAAGACC+AGG | 0.605162 | 6.4:+48878694 | None:intergenic |
| ACTATTTGAACCTGAAAGAG+AGG | 0.606799 | 6.4:-48877458 | MS.gene72606:CDS |
| GTTGGATCATATGATGAGGA+GGG | 0.615904 | 6.4:-48882715 | MS.gene72606:CDS |
| GCCAGTTTCTCGAGACCCGG+AGG | 0.635519 | 6.4:-48877725 | MS.gene72606:CDS |
| TTCCGGCAAAGATTGTGCCA+TGG | 0.636721 | 6.4:-48882773 | MS.gene72606:CDS |
| TGTCATCATCATCACCGGAA+AGG | 0.643505 | 6.4:-48882810 | MS.gene72606:CDS |
| AAGATTGTGCCATGGAAGAG+TGG | 0.646198 | 6.4:-48882765 | MS.gene72606:CDS |
| GTTCCATTTCTTGTTCTACA+CGG | 0.650148 | 6.4:-48877586 | MS.gene72606:CDS |
| GAGTGTCCATAACAGAAACA+TGG | 0.657604 | 6.4:+48878685 | None:intergenic |
| TCATCATCACCGGAAAGGCG+CGG | 0.663566 | 6.4:-48882805 | MS.gene72606:CDS |
| TCATCACCGGAAAGGCGCGG+TGG | 0.687802 | 6.4:-48882802 | MS.gene72606:CDS |
| AGGTGTTGGATCATATGATG+AGG | 0.726895 | 6.4:-48882719 | MS.gene72606:CDS |
| ATTGTGCCATGGAAGAGTGG+TGG | 0.729461 | 6.4:-48882762 | MS.gene72606:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATTTATCTATAGA+AGG | - | chr6.4:48878135-48878154 | MS.gene72606:intron | 10.0% |
| !!! | CTTAATTATGTTTTTTATAT+AGG | + | chr6.4:48880803-48880822 | None:intergenic | 10.0% |
| !! | AAATTGATTATGAATAAAAG+TGG | - | chr6.4:48880491-48880510 | MS.gene72606:intron | 15.0% |
| !! | GAAGAAATAAAAAATTAACA+AGG | + | chr6.4:48878575-48878594 | None:intergenic | 15.0% |
| !! | TAATTCAAAATTAATTGTCA+CGG | + | chr6.4:48880459-48880478 | None:intergenic | 15.0% |
| !! | TCGTTATTAACTATAATATT+CGG | - | chr6.4:48882192-48882211 | MS.gene72606:intron | 15.0% |
| !! | TTCATTATTATCCATATTAT+AGG | - | chr6.4:48881826-48881845 | MS.gene72606:intron | 15.0% |
| !! | TTGGAATATATATATAACTA+AGG | - | chr6.4:48881091-48881110 | MS.gene72606:intron | 15.0% |
| !! | TTTATATCTTATATGAAAAC+AGG | - | chr6.4:48881460-48881479 | MS.gene72606:intron | 15.0% |
| !!! | AATAGTTTTACATAAAAACA+AGG | + | chr6.4:48878362-48878381 | None:intergenic | 15.0% |
| !!! | ATCATAATTTTTTAAACACA+AGG | + | chr6.4:48877917-48877936 | None:intergenic | 15.0% |
| !!! | TTGTGATTTATATTTAAGTT+TGG | - | chr6.4:48881581-48881600 | MS.gene72606:intron | 15.0% |
| !! | AAAATTATGATTTATGAGCT+AGG | - | chr6.4:48877926-48877945 | MS.gene72606:intron | 20.0% |
| !! | AATCACTTAAATCAAAAAGT+TGG | + | chr6.4:48881968-48881987 | None:intergenic | 20.0% |
| !! | AATGACTATCATGTAAAAAA+AGG | + | chr6.4:48880055-48880074 | None:intergenic | 20.0% |
| !! | ATTAGACAATAAAACATACA+AGG | + | chr6.4:48880905-48880924 | None:intergenic | 20.0% |
| !! | CAAGCATACTAATTATAATT+TGG | + | chr6.4:48879104-48879123 | None:intergenic | 20.0% |
| !! | CATGACTTAAATTAAGTTAA+GGG | + | chr6.4:48878393-48878412 | None:intergenic | 20.0% |
| !! | GTTAGTTAATACAGTTAAAA+TGG | + | chr6.4:48882438-48882457 | None:intergenic | 20.0% |
| !! | TAAATTGTGTTCAATATACA+TGG | - | chr6.4:48882238-48882257 | MS.gene72606:intron | 20.0% |
| !! | TACATTATACACAATTCAAT+TGG | + | chr6.4:48881806-48881825 | None:intergenic | 20.0% |
| !! | TCATATATAACATGATACTA+TGG | + | chr6.4:48882528-48882547 | None:intergenic | 20.0% |
| !! | TTAAGATTAGGTATGTTTAT+AGG | - | chr6.4:48877820-48877839 | MS.gene72606:intron | 20.0% |
| !! | TTCATAGAAAATGCTTTAAT+GGG | + | chr6.4:48879639-48879658 | None:intergenic | 20.0% |
| !! | TTTATGTAAAACTATTTGAG+AGG | - | chr6.4:48878366-48878385 | MS.gene72606:intron | 20.0% |
| !! | TTTGTGTTTGTAGTTAATTA+AGG | - | chr6.4:48879476-48879495 | MS.gene72606:intron | 20.0% |
| !!! | AAAAGTATCAAATTGTATGA+AGG | - | chr6.4:48882899-48882918 | MS.gene72606:CDS | 20.0% |
| !!! | ACTATTTTCATAATCTATCT+TGG | + | chr6.4:48879878-48879897 | None:intergenic | 20.0% |
| !!! | ATATTTTACGACAATTTAGA+TGG | - | chr6.4:48882061-48882080 | MS.gene72606:intron | 20.0% |
| !!! | ATCGATATTTTTACTTTTGA+AGG | + | chr6.4:48880660-48880679 | None:intergenic | 20.0% |
| !!! | ATTGAGCATTTTAACATATA+GGG | - | chr6.4:48879702-48879721 | MS.gene72606:intron | 20.0% |
| !!! | CGATTTTCTCAAATTATTAA+CGG | - | chr6.4:48878042-48878061 | MS.gene72606:intron | 20.0% |
| !!! | TATCGATATAATTCTTTTAG+AGG | + | chr6.4:48882496-48882515 | None:intergenic | 20.0% |
| !!! | TGTATGTTTTATTGTCTAAT+TGG | - | chr6.4:48880905-48880924 | MS.gene72606:intron | 20.0% |
| !!! | TTTCTTATCTGAACAATTTT+TGG | - | chr6.4:48880273-48880292 | MS.gene72606:intron | 20.0% |
| !!! | TTTTTTTGAAACTTACCTAT+AGG | - | chr6.4:48881764-48881783 | MS.gene72606:intron | 20.0% |
| ! | AACCATAATATACTTGTGTA+TGG | + | chr6.4:48882556-48882575 | None:intergenic | 25.0% |
| ! | AATATGTGATTAATTACGTC+TGG | - | chr6.4:48882097-48882116 | MS.gene72606:intron | 25.0% |
| ! | AGACTACAAATCATGATAAA+TGG | + | chr6.4:48882292-48882311 | None:intergenic | 25.0% |
| ! | AGTAGAAACTACACAAATAT+TGG | + | chr6.4:48879348-48879367 | None:intergenic | 25.0% |
| ! | ATATATTCCAACAAAATTCC+TGG | + | chr6.4:48881082-48881101 | None:intergenic | 25.0% |
| ! | ATCAGGAAAATGGAAAAATA+AGG | - | chr6.4:48878210-48878229 | MS.gene72606:intron | 25.0% |
| ! | ATGCTATAAGCTTATTCAAA+CGG | - | chr6.4:48881547-48881566 | MS.gene72606:intron | 25.0% |
| ! | ATTAGGTATGTTTATAGGTT+TGG | - | chr6.4:48877825-48877844 | MS.gene72606:intron | 25.0% |
| ! | CAAATTGAAATTAGCCAAAT+AGG | + | chr6.4:48879565-48879584 | None:intergenic | 25.0% |
| ! | CAACCATTATGATTATTATC+AGG | + | chr6.4:48878295-48878314 | None:intergenic | 25.0% |
| ! | CAATGCTCTTAATGAAAAAT+AGG | + | chr6.4:48877451-48877470 | None:intergenic | 25.0% |
| ! | CATGAAAACATAGTTAAATG+AGG | - | chr6.4:48882319-48882338 | MS.gene72606:intron | 25.0% |
| ! | CCATGACTTAAATTAAGTTA+AGG | + | chr6.4:48878394-48878413 | None:intergenic | 25.0% |
| ! | CCTTAACTTAATTTAAGTCA+TGG | - | chr6.4:48878391-48878410 | MS.gene72606:intron | 25.0% |
| ! | CTGATAATAATCATAATGGT+TGG | - | chr6.4:48878293-48878312 | MS.gene72606:intron | 25.0% |
| ! | CTTATCAAGGTTTCAAATAA+CGG | + | chr6.4:48878514-48878533 | None:intergenic | 25.0% |
| ! | CTTCACAATTTCATATTGTT+TGG | + | chr6.4:48880003-48880022 | None:intergenic | 25.0% |
| ! | CTTCATAGAAAATGCTTTAA+TGG | + | chr6.4:48879640-48879659 | None:intergenic | 25.0% |
| ! | GATAACCATATTAATTCCAA+GGG | + | chr6.4:48878719-48878738 | None:intergenic | 25.0% |
| ! | GATTAAAATCGTGGTTAATT+AGG | + | chr6.4:48882174-48882193 | None:intergenic | 25.0% |
| ! | GTTAATAACGATTAAAATCG+TGG | + | chr6.4:48882183-48882202 | None:intergenic | 25.0% |
| ! | GTTAATACAGTTAAAATGGA+TGG | + | chr6.4:48882434-48882453 | None:intergenic | 25.0% |
| ! | GTTTAATAACTTTGCAATGA+TGG | - | chr6.4:48882015-48882034 | MS.gene72606:intron | 25.0% |
| ! | TAACTTATGCTTCATGAATT+TGG | - | chr6.4:48879156-48879175 | MS.gene72606:intron | 25.0% |
| ! | TACATCACATTTACATTGTT+TGG | - | chr6.4:48879302-48879321 | MS.gene72606:intron | 25.0% |
| ! | TCAAAATGTCAATTCAAACA+GGG | + | chr6.4:48881117-48881136 | None:intergenic | 25.0% |
| ! | TCACTGAAGATATAATTCAA+TGG | - | chr6.4:48882963-48882982 | MS.gene72606:CDS | 25.0% |
| ! | TCTCCTGATAATAATCATAA+TGG | - | chr6.4:48878289-48878308 | MS.gene72606:intron | 25.0% |
| ! | TGATAACCATATTAATTCCA+AGG | + | chr6.4:48878720-48878739 | None:intergenic | 25.0% |
| ! | TGATAAGCTTACTTATATAC+AGG | + | chr6.4:48880176-48880195 | None:intergenic | 25.0% |
| ! | TGGATTGAACAATATATTTG+AGG | - | chr6.4:48880511-48880530 | MS.gene72606:intron | 25.0% |
| ! | TTAAATGAGGTTCAAAATTG+TGG | - | chr6.4:48882332-48882351 | MS.gene72606:intron | 25.0% |
| ! | TTCAATGTAATTATATGCGT+CGG | + | chr6.4:48878017-48878036 | None:intergenic | 25.0% |
| !! | ATACAATTTTCACACAATGT+TGG | - | chr6.4:48877784-48877803 | MS.gene72606:CDS | 25.0% |
| !! | CTTGTATTAACTCTGAAAAA+TGG | - | chr6.4:48879120-48879139 | MS.gene72606:intron | 25.0% |
| !! | TACTTTTGTTACCATTTAGA+GGG | - | chr6.4:48877508-48877527 | MS.gene72606:CDS | 25.0% |
| !! | TAGATGCTTTTCTTACTATT+TGG | - | chr6.4:48880339-48880358 | MS.gene72606:intron | 25.0% |
| !! | TATAAATCACAATCCCTTTT+AGG | + | chr6.4:48881573-48881592 | None:intergenic | 25.0% |
| !! | TCAAATTTTCTTTGATCAGT+AGG | - | chr6.4:48879377-48879396 | MS.gene72606:CDS | 25.0% |
| !! | TTATTTGAAACCTTGATAAG+TGG | - | chr6.4:48878514-48878533 | MS.gene72606:CDS | 25.0% |
| !! | TTTTGTGTTAATATCAGCTA+TGG | - | chr6.4:48877479-48877498 | MS.gene72606:CDS | 25.0% |
| !!! | AATCATTTTTCCACTAGTTA+GGG | - | chr6.4:48878640-48878659 | MS.gene72606:intron | 25.0% |
| !!! | AATTTTTGGTGTTTCATTAG+AGG | - | chr6.4:48880287-48880306 | MS.gene72606:intron | 25.0% |
| !!! | GATATTTTTACTTTTGAAGG+AGG | + | chr6.4:48880657-48880676 | None:intergenic | 25.0% |
| !!! | GATTGAGCATTTTAACATAT+AGG | - | chr6.4:48879701-48879720 | MS.gene72606:intron | 25.0% |
| !!! | TTCTTCATACAATTTTAGTG+AGG | + | chr6.4:48882864-48882883 | None:intergenic | 25.0% |
| !!! | TTGAGCATTTTAACATATAG+GGG | - | chr6.4:48879703-48879722 | MS.gene72606:intron | 25.0% |
| !!! | TTTTCCTTTGTTTTTAACAG+TGG | - | chr6.4:48878999-48879018 | MS.gene72606:intron | 25.0% |
| AAACAAAGGAAAATCACTTC+AGG | + | chr6.4:48878992-48879011 | None:intergenic | 30.0% | |
| AAGGTTATAACTGAAAATCC+TGG | - | chr6.4:48881683-48881702 | MS.gene72606:intron | 30.0% | |
| ACAGAAAATATTCATCGAGA+AGG | - | chr6.4:48881664-48881683 | MS.gene72606:intron | 30.0% | |
| AGAAATGTTTGAGGGAATAT+TGG | - | chr6.4:48877739-48877758 | MS.gene72606:CDS | 30.0% | |
| AGAATTTCCAAGAAAATTGC+TGG | + | chr6.4:48879526-48879545 | None:intergenic | 30.0% | |
| CATGAAACATGAAACAAACA+AGG | + | chr6.4:48878240-48878259 | None:intergenic | 30.0% | |
| CTCAAAATGTCAATTCAAAC+AGG | + | chr6.4:48881118-48881137 | None:intergenic | 30.0% | |
| CTTCAACATGCATCTATATT+TGG | - | chr6.4:48880102-48880121 | MS.gene72606:intron | 30.0% | |
| GACATCAGTAAAACAAAATC+AGG | + | chr6.4:48880962-48880981 | None:intergenic | 30.0% | |
| GTAATTCAGCATACAAGAAA+GGG | - | chr6.4:48882645-48882664 | MS.gene72606:CDS | 30.0% | |
| GTTAATATCAGCTATGGTTA+TGG | - | chr6.4:48877485-48877504 | MS.gene72606:CDS | 30.0% | |
| TACAAACTGTTGTCAAATTG+CGG | + | chr6.4:48878754-48878773 | None:intergenic | 30.0% | |
| TACCTAATCTTAACAGAAAG+AGG | + | chr6.4:48877813-48877832 | None:intergenic | 30.0% | |
| TAGCCTAATAGAGAAACAAA+AGG | + | chr6.4:48879190-48879209 | None:intergenic | 30.0% | |
| TAGTAGTTATGTTAAGTGTC+CGG | + | chr6.4:48880764-48880783 | None:intergenic | 30.0% | |
| TATGACAGTTTCATGAACAT+TGG | - | chr6.4:48880830-48880849 | MS.gene72606:intron | 30.0% | |
| TCTTCCACTGTTAAAAACAA+AGG | + | chr6.4:48879006-48879025 | None:intergenic | 30.0% | |
| TGCCATACACAAGTATATTA+TGG | - | chr6.4:48882551-48882570 | MS.gene72606:intron | 30.0% | |
| TGTAATTCAGCATACAAGAA+AGG | - | chr6.4:48882644-48882663 | MS.gene72606:CDS | 30.0% | |
| TGTTTCATTAGAGGTTTATG+TGG | - | chr6.4:48880296-48880315 | MS.gene72606:intron | 30.0% | |
| TTACTATTTGGAAGGAACAT+AGG | - | chr6.4:48880351-48880370 | MS.gene72606:intron | 30.0% | |
| TTCGTGTGTTAAAATCTACA+CGG | - | chr6.4:48882263-48882282 | MS.gene72606:intron | 30.0% | |
| TTTACAGATACCACTTATCA+AGG | + | chr6.4:48878527-48878546 | None:intergenic | 30.0% | |
| TTTGTCCCTTGGAATTAATA+TGG | - | chr6.4:48878711-48878730 | MS.gene72606:CDS | 30.0% | |
| ! | ATGTTGATGAGAAATGTTTG+AGG | - | chr6.4:48877730-48877749 | MS.gene72606:CDS | 30.0% |
| ! | GTACTTTTGTTACCATTTAG+AGG | - | chr6.4:48877507-48877526 | MS.gene72606:CDS | 30.0% |
| ! | TGCTTTTCTTACTATTTGGA+AGG | - | chr6.4:48880343-48880362 | MS.gene72606:intron | 30.0% |
| ! | TGTTGACATTTTTCTCCTAT+AGG | + | chr6.4:48881782-48881801 | None:intergenic | 30.0% |
| ! | TGTTGATGAGAAATGTTTGA+GGG | - | chr6.4:48877731-48877750 | MS.gene72606:CDS | 30.0% |
| ! | TTCTTTTAACATAAACGCCT+CGG | + | chr6.4:48877424-48877443 | None:intergenic | 30.0% |
| ! | TTTTTATGAGCGCTATCAAA+CGG | + | chr6.4:48881170-48881189 | None:intergenic | 30.0% |
| !! | CAATCATTTTTCCACTAGTT+AGG | - | chr6.4:48878639-48878658 | MS.gene72606:intron | 30.0% |
| !! | GCTGAATTACATTTTAGTGT+TGG | + | chr6.4:48882635-48882654 | None:intergenic | 30.0% |
| !! | GTTCCTTTTGTTTCTCTATT+AGG | - | chr6.4:48879184-48879203 | MS.gene72606:intron | 30.0% |
| !!! | ATCTCTGTTTTTGTCATTAC+AGG | - | chr6.4:48882580-48882599 | MS.gene72606:intron | 30.0% |
| !!! | CATAACTTTTGAGACTGTTT+CGG | - | chr6.4:48879802-48879821 | MS.gene72606:intron | 30.0% |
| !!! | TGAAGCTATGCCTTTTTTAA+GGG | - | chr6.4:48879739-48879758 | MS.gene72606:intron | 30.0% |
| !!! | TTGAAGCTATGCCTTTTTTA+AGG | - | chr6.4:48879738-48879757 | MS.gene72606:intron | 30.0% |
| !!! | TTGATTGTTTTGTTGGTTTC+TGG | - | chr6.4:48878320-48878339 | MS.gene72606:intron | 30.0% |
| AATCTATCTTGGAGAGCTTA+CGG | + | chr6.4:48879867-48879886 | None:intergenic | 35.0% | |
| ACGTATAAAGAGTTAGAAGG+AGG | - | chr6.4:48880720-48880739 | MS.gene72606:intron | 35.0% | |
| ACTATTTGAACCTGAAAGAG+AGG | - | chr6.4:48882937-48882956 | MS.gene72606:CDS | 35.0% | |
| AGATGCATGTTGAAGAATGA+TGG | + | chr6.4:48880097-48880116 | None:intergenic | 35.0% | |
| AGTAAGCTCAAAACAACTGA+TGG | + | chr6.4:48879843-48879862 | None:intergenic | 35.0% | |
| AGTAGTTATGTTAAGTGTCC+GGG | + | chr6.4:48880763-48880782 | None:intergenic | 35.0% | |
| ATAGTTAGAGTTGTGACAAC+TGG | + | chr6.4:48882143-48882162 | None:intergenic | 35.0% | |
| ATCTTCCCTATGTTAGTACA+AGG | + | chr6.4:48879235-48879254 | None:intergenic | 35.0% | |
| ATGTGATTAATTACGTCTGG+CGG | - | chr6.4:48882100-48882119 | MS.gene72606:intron | 35.0% | |
| CACAATATGGGACAACAATT+TGG | + | chr6.4:48882460-48882479 | None:intergenic | 35.0% | |
| CAGCTACAAAATCAGGAAAA+TGG | - | chr6.4:48878200-48878219 | MS.gene72606:intron | 35.0% | |
| CATCTATATTTGGATGTTGC+AGG | - | chr6.4:48880112-48880131 | MS.gene72606:intron | 35.0% | |
| CTAATGGCTACAAGGTTTAT+GGG | - | chr6.4:48879054-48879073 | MS.gene72606:intron | 35.0% | |
| CTACTGAGTTATCATTGTTC+TGG | - | chr6.4:48881615-48881634 | MS.gene72606:intron | 35.0% | |
| CTATACTGGACCACAATTAA+GGG | + | chr6.4:48878418-48878437 | None:intergenic | 35.0% | |
| CTATGCAAGCTTCAATCTTT+GGG | + | chr6.4:48881862-48881881 | None:intergenic | 35.0% | |
| CTCCTCTTTCTGTTAAGATT+AGG | - | chr6.4:48877808-48877827 | MS.gene72606:intron | 35.0% | |
| CTGAAGAGCTTATGGAAATA+AGG | + | chr6.4:48881422-48881441 | None:intergenic | 35.0% | |
| CTTATTCAAACGGCCTAAAA+GGG | - | chr6.4:48881557-48881576 | MS.gene72606:intron | 35.0% | |
| CTTATTTCCATAAGCTCTTC+AGG | - | chr6.4:48881420-48881439 | MS.gene72606:intron | 35.0% | |
| CTTGACCTTGTACTAACATA+GGG | - | chr6.4:48879227-48879246 | MS.gene72606:intron | 35.0% | |
| CTTGGAAATTCTTGTGCAAA+TGG | - | chr6.4:48879534-48879553 | MS.gene72606:intron | 35.0% | |
| GGAAAATGGAAAAATAAGGC+AGG | - | chr6.4:48878214-48878233 | MS.gene72606:intron | 35.0% | |
| GTGACGTATAAAGAGTTAGA+AGG | - | chr6.4:48880717-48880736 | MS.gene72606:intron | 35.0% | |
| GTTCCATTTCTTGTTCTACA+CGG | - | chr6.4:48882809-48882828 | MS.gene72606:CDS | 35.0% | |
| TATAAAGAGTTAGAAGGAGG+AGG | - | chr6.4:48880723-48880742 | MS.gene72606:intron | 35.0% | |
| TATGATTTATGAGCTAGGCA+CGG | - | chr6.4:48877931-48877950 | MS.gene72606:intron | 35.0% | |
| TCCAAAGAGACCCTTAAAAA+AGG | + | chr6.4:48879752-48879771 | None:intergenic | 35.0% | |
| TGCAAATGGATGTACCTATT+TGG | - | chr6.4:48879548-48879567 | MS.gene72606:intron | 35.0% | |
| TGGATGTGTTGTCTTCATAA+GGG | - | chr6.4:48880850-48880869 | MS.gene72606:intron | 35.0% | |
| TGTATGCTTACCACCAAAAA+TGG | + | chr6.4:48881932-48881951 | None:intergenic | 35.0% | |
| TTATTATTGCGCAGTGTATG+TGG | + | chr6.4:48879436-48879455 | None:intergenic | 35.0% | |
| TTGGATGTGTTGTCTTCATA+AGG | - | chr6.4:48880849-48880868 | MS.gene72606:intron | 35.0% | |
| TTTGTGACAGCTACAAAATC+AGG | - | chr6.4:48878193-48878212 | MS.gene72606:intron | 35.0% | |
| ! | ACTTGAGCTAGTTTATCTTC+TGG | - | chr6.4:48879779-48879798 | MS.gene72606:intron | 35.0% |
| ! | AGATTGACCAGCAATTTTCT+TGG | - | chr6.4:48879516-48879535 | MS.gene72606:intron | 35.0% |
| ! | ATTGGCTATAAGGAGAGTTT+TGG | - | chr6.4:48877704-48877723 | MS.gene72606:CDS | 35.0% |
| ! | CATTCACAATTTTTGTCCCT+TGG | - | chr6.4:48878700-48878719 | MS.gene72606:CDS | 35.0% |
| ! | GAAAATTGTATCACCCCTTT+TGG | + | chr6.4:48877775-48877794 | None:intergenic | 35.0% |
| ! | GCGTTCTTTTGACACAATAT+GGG | + | chr6.4:48882472-48882491 | None:intergenic | 35.0% |
| ! | GTACTGACAGATATGATTGA+AGG | - | chr6.4:48881198-48881217 | MS.gene72606:intron | 35.0% |
| ! | TGAATCTCCAGGAATTTTGT+TGG | - | chr6.4:48881072-48881091 | MS.gene72606:intron | 35.0% |
| ! | TGAGACTTCTCATCCATTTT+TGG | - | chr6.4:48881916-48881935 | MS.gene72606:intron | 35.0% |
| ! | TGCGTTCTTTTGACACAATA+TGG | + | chr6.4:48882473-48882492 | None:intergenic | 35.0% |
| ! | TTGTGGTTAGTTGTGTTGAA+TGG | - | chr6.4:48882349-48882368 | MS.gene72606:intron | 35.0% |
| ! | TTTTTCCACTAGTTAGGGTT+TGG | - | chr6.4:48878645-48878664 | MS.gene72606:intron | 35.0% |
| !! | ATGAGGCTTTGAATAAAGAC+AGG | - | chr6.4:48880408-48880427 | MS.gene72606:intron | 35.0% |
| !! | GGACTTGTTATTCTTATGCA+TGG | - | chr6.4:48878887-48878906 | MS.gene72606:intron | 35.0% |
| !! | GTCAAGAAGTGCCTATAATA+TGG | + | chr6.4:48881840-48881859 | None:intergenic | 35.0% |
| !! | TACAATTTTAGTGAGGCAGT+TGG | + | chr6.4:48882857-48882876 | None:intergenic | 35.0% |
| !! | TGGTCTCTTGATTGTTTTGT+TGG | - | chr6.4:48878313-48878332 | MS.gene72606:intron | 35.0% |
| !!! | ATCTTCTCCTCTTTTTCAAC+AGG | + | chr6.4:48877549-48877568 | None:intergenic | 35.0% |
| !!! | ATTGGCTTTTTGGAACCAAA+AGG | - | chr6.4:48877757-48877776 | MS.gene72606:CDS | 35.0% |
| !!! | TTGAGGGAATATTGGCTTTT+TGG | - | chr6.4:48877747-48877766 | MS.gene72606:CDS | 35.0% |
| !!! | TTGGCTTTTTGGAACCAAAA+GGG | - | chr6.4:48877758-48877777 | MS.gene72606:CDS | 35.0% |
| AAGATTGAAGCTTGCATAGC+TGG | - | chr6.4:48881863-48881882 | MS.gene72606:intron | 40.0% | |
| AAGCTAACCTGAAGAGCTTA+TGG | + | chr6.4:48881430-48881449 | None:intergenic | 40.0% | |
| AAGTCATGGTCCCTTAATTG+TGG | - | chr6.4:48878405-48878424 | MS.gene72606:intron | 40.0% | |
| ACAAGGTTTATGGGATGGAT+TGG | - | chr6.4:48879063-48879082 | MS.gene72606:intron | 40.0% | |
| ACAGATATTGACACAGACAC+TGG | + | chr6.4:48878096-48878115 | None:intergenic | 40.0% | |
| AGCGCTCATAAAAATCTCTG+AGG | - | chr6.4:48881176-48881195 | MS.gene72606:intron | 40.0% | |
| AGGAGGAAAATTGATTGCAC+AGG | + | chr6.4:48880640-48880659 | None:intergenic | 40.0% | |
| AGGCAGAATATGCAATCAAC+AGG | + | chr6.4:48878555-48878574 | None:intergenic | 40.0% | |
| AGGTGCAGCAATTACTCTTA+AGG | - | chr6.4:48881736-48881755 | MS.gene72606:intron | 40.0% | |
| AGTGTTGTCATCATCATCAC+CGG | - | chr6.4:48877580-48877599 | MS.gene72606:CDS | 40.0% | |
| ATGTGTTACCTACTTTGTGC+AGG | - | chr6.4:48878864-48878883 | MS.gene72606:intron | 40.0% | |
| CAACTGCATGATCAAGAGAA+TGG | + | chr6.4:48881035-48881054 | None:intergenic | 40.0% | |
| CAGGTTTGAGCAAAAGTGAA+TGG | + | chr6.4:48880943-48880962 | None:intergenic | 40.0% | |
| CATATGATCCAACACCTTCA+TGG | + | chr6.4:48877673-48877692 | None:intergenic | 40.0% | |
| CCTATACTGGACCACAATTA+AGG | + | chr6.4:48878419-48878438 | None:intergenic | 40.0% | |
| CCTATGTTAGTACAAGGTCA+AGG | + | chr6.4:48879229-48879248 | None:intergenic | 40.0% | |
| CCTTAATTGTGGTCCAGTAT+AGG | - | chr6.4:48878416-48878435 | MS.gene72606:intron | 40.0% | |
| CCTTGACCTTGTACTAACAT+AGG | - | chr6.4:48879226-48879245 | MS.gene72606:intron | 40.0% | |
| GATTCGAAGAATCTCATAGC+CGG | + | chr6.4:48882753-48882772 | None:intergenic | 40.0% | |
| GCTAATGGCTACAAGGTTTA+TGG | - | chr6.4:48879053-48879072 | MS.gene72606:intron | 40.0% | |
| GCTATGCAAGCTTCAATCTT+TGG | + | chr6.4:48881863-48881882 | None:intergenic | 40.0% | |
| GCTTATTCAAACGGCCTAAA+AGG | - | chr6.4:48881556-48881575 | MS.gene72606:intron | 40.0% | |
| GGCAGTAGTAATGATGCTAT+TGG | + | chr6.4:48882614-48882633 | None:intergenic | 40.0% | |
| GGTATCACCTGTTGAAAAAG+AGG | - | chr6.4:48877539-48877558 | MS.gene72606:CDS | 40.0% | |
| GTTGGATCATATGATGAGGA+GGG | - | chr6.4:48877680-48877699 | MS.gene72606:CDS | 40.0% | |
| TATGTGGCTGTTGTAAACTC+TGG | + | chr6.4:48879420-48879439 | None:intergenic | 40.0% | |
| TATTCAAAGCCTCATCTGTG+AGG | + | chr6.4:48880403-48880422 | None:intergenic | 40.0% | |
| TCAGTGATATCCTCTCTTTC+AGG | + | chr6.4:48882950-48882969 | None:intergenic | 40.0% | |
| TCATATGATGAGGAGGGAAT+TGG | - | chr6.4:48877686-48877705 | MS.gene72606:CDS | 40.0% | |
| TGACACCATAGCCAAAATCA+CGG | - | chr6.4:48878481-48878500 | MS.gene72606:CDS | 40.0% | |
| TGTGTTACCTACTTTGTGCA+GGG | - | chr6.4:48878865-48878884 | MS.gene72606:intron | 40.0% | |
| TGTTGGATCATATGATGAGG+AGG | - | chr6.4:48877679-48877698 | MS.gene72606:CDS | 40.0% | |
| ! | GATATGATTGAAGGCGTGTT+TGG | - | chr6.4:48881207-48881226 | MS.gene72606:intron | 40.0% |
| ! | GATGTCTGCTCTCATCTTTT+AGG | - | chr6.4:48880976-48880995 | MS.gene72606:intron | 40.0% |
| ! | TGATCATGCAGTTGCTGATT+TGG | - | chr6.4:48881041-48881060 | MS.gene72606:intron | 40.0% |
| ! | TGCATGGTCTTAATGAACAC+AGG | - | chr6.4:48878903-48878922 | MS.gene72606:intron | 40.0% |
| !! | AGGTGTTGGATCATATGATG+AGG | - | chr6.4:48877676-48877695 | MS.gene72606:CDS | 40.0% |
| !! | GACTTCTCATCCATTTTTGG+TGG | - | chr6.4:48881919-48881938 | MS.gene72606:intron | 40.0% |
| !! | GTTTATGGGATGGATTGGAT+TGG | - | chr6.4:48879068-48879087 | MS.gene72606:intron | 40.0% |
| !! | TAGTATTACCAGCATCGATG+CGG | - | chr6.4:48881310-48881329 | MS.gene72606:intron | 40.0% |
| !! | TCTCATCTTTTAGGTCATGG+TGG | - | chr6.4:48880985-48881004 | MS.gene72606:intron | 40.0% |
| !! | TGCTCTCATCTTTTAGGTCA+TGG | - | chr6.4:48880982-48881001 | MS.gene72606:intron | 40.0% |
| !!! | GCCTTTTTTAAGGGTCTCTT+TGG | - | chr6.4:48879748-48879767 | MS.gene72606:intron | 40.0% |
| !!! | TGGCTTTTTGGAACCAAAAG+GGG | - | chr6.4:48877759-48877778 | MS.gene72606:CDS | 40.0% |
| AACAGCAGCATCACCTATAC+TGG | + | chr6.4:48878432-48878451 | None:intergenic | 45.0% | |
| AAGATTGTGCCATGGAAGAG+TGG | - | chr6.4:48877630-48877649 | MS.gene72606:CDS | 45.0% | |
| ACATTCACATCACCTGCAGT+TGG | - | chr6.4:48881890-48881909 | MS.gene72606:intron | 45.0% | |
| ACCATTTAGAGGGCGAAGAA+GGG | - | chr6.4:48877518-48877537 | MS.gene72606:CDS | 45.0% | |
| AGGATACTTGCTCGTGTGTT+TGG | - | chr6.4:48880428-48880447 | MS.gene72606:intron | 45.0% | |
| CAAAGCCAAACCCTAACTAG+TGG | + | chr6.4:48878653-48878672 | None:intergenic | 45.0% | |
| CACGAGTGTCAGTATTGTGT+CGG | + | chr6.4:48881259-48881278 | None:intergenic | 45.0% | |
| CATAGCCAAAATCACGGTTG+CGG | - | chr6.4:48878487-48878506 | MS.gene72606:CDS | 45.0% | |
| CGCGAAATATTCAGACCCAT+TGG | - | chr6.4:48882700-48882719 | MS.gene72606:CDS | 45.0% | |
| GCAAAGCAGCTGAATGCTAA+TGG | - | chr6.4:48879038-48879057 | MS.gene72606:intron | 45.0% | |
| GCTGAATGCTAATGGCTACA+AGG | - | chr6.4:48879046-48879065 | MS.gene72606:intron | 45.0% | |
| GTCTGTCAGTGCTTCTTAGA+TGG | - | chr6.4:48881362-48881381 | MS.gene72606:CDS | 45.0% | |
| GTGCCGTGTAGAACAAGAAA+TGG | + | chr6.4:48882815-48882834 | None:intergenic | 45.0% | |
| GTGTTACCTACTTTGTGCAG+GGG | - | chr6.4:48878866-48878885 | MS.gene72606:intron | 45.0% | |
| TACCATTTAGAGGGCGAAGA+AGG | - | chr6.4:48877517-48877536 | MS.gene72606:CDS | 45.0% | |
| TGAAGCACAGACACGTACAT+CGG | - | chr6.4:48879655-48879674 | MS.gene72606:intron | 45.0% | |
| TGAGGAGGGAATTGGCTATA+AGG | - | chr6.4:48877694-48877713 | MS.gene72606:CDS | 45.0% | |
| TGGCTACAAGGTTTATGGGA+TGG | - | chr6.4:48879058-48879077 | MS.gene72606:intron | 45.0% | |
| TGGTATGTCGATGAATCTCC+AGG | - | chr6.4:48881061-48881080 | MS.gene72606:intron | 45.0% | |
| TGTCATCATCATCACCGGAA+AGG | - | chr6.4:48877585-48877604 | MS.gene72606:CDS | 45.0% | |
| TGTTGGTATGGTTGCCATGA+AGG | - | chr6.4:48877656-48877675 | MS.gene72606:CDS | 45.0% | |
| TTCCATGGCACAATCTTTGC+CGG | + | chr6.4:48877627-48877646 | None:intergenic | 45.0% | |
| TTCTGTTATGGACACTCGAC+AGG | - | chr6.4:48881716-48881735 | MS.gene72606:intron | 45.0% | |
| TTGACCTAGTTAACCGACCT+AGG | - | chr6.4:48880375-48880394 | MS.gene72606:intron | 45.0% | |
| TTTCTTGTTCTACACGGCAC+TGG | - | chr6.4:48882815-48882834 | MS.gene72606:CDS | 45.0% | |
| ! | TAACTTGCGCTAGAACTCGT+TGG | - | chr6.4:48879453-48879472 | MS.gene72606:intron | 45.0% |
| ! | TACGTCTGGCGGATAGTTAA+TGG | - | chr6.4:48882111-48882130 | MS.gene72606:intron | 45.0% |
| ! | TATGGTTGCCATGAAGGTGT+TGG | - | chr6.4:48877662-48877681 | MS.gene72606:CDS | 45.0% |
| ! | TGTCAGTATTGTGTCGGTGT+TGG | + | chr6.4:48881253-48881272 | None:intergenic | 45.0% |
| ! | TTAGGTCATGGTGGTAGTGA+TGG | - | chr6.4:48880994-48881013 | MS.gene72606:intron | 45.0% |
| !! | CTAAGAAGCACTGACAGACA+CGG | + | chr6.4:48881361-48881380 | None:intergenic | 45.0% |
| !! | GGCTATAAGGAGAGTTTTGG+AGG | - | chr6.4:48877707-48877726 | MS.gene72606:CDS | 45.0% |
| AATCAGACACGCCTAATCCG+AGG | + | chr6.4:48877962-48877981 | None:intergenic | 50.0% | |
| ACAAGTCCCCTGCACAAAGT+AGG | + | chr6.4:48878875-48878894 | None:intergenic | 50.0% | |
| ACCCTTCTTCGCCCTCTAAA+TGG | + | chr6.4:48877522-48877541 | None:intergenic | 50.0% | |
| AGCGATCCTGTGCATACCAA+TGG | + | chr6.4:48882719-48882738 | None:intergenic | 50.0% | |
| AGTTAGAAGGAGGAGGTCTC+GGG | - | chr6.4:48880730-48880749 | MS.gene72606:intron | 50.0% | |
| ATTGTGCCATGGAAGAGTGG+TGG | - | chr6.4:48877633-48877652 | MS.gene72606:CDS | 50.0% | |
| GAAGTCTCAACTCCAACTGC+AGG | + | chr6.4:48881905-48881924 | None:intergenic | 50.0% | |
| GAGTTAGAAGGAGGAGGTCT+CGG | - | chr6.4:48880729-48880748 | MS.gene72606:intron | 50.0% | |
| GCGATCCTGTGCATACCAAT+GGG | + | chr6.4:48882718-48882737 | None:intergenic | 50.0% | |
| GGATCGCTTAGAGTACGAAC+CGG | - | chr6.4:48882731-48882750 | MS.gene72606:CDS | 50.0% | |
| GTGGCTGTTGTAAACTCTGG+AGG | + | chr6.4:48879417-48879436 | None:intergenic | 50.0% | |
| TATTTCGCGATGAGAGCCTC+CGG | + | chr6.4:48882689-48882708 | None:intergenic | 50.0% | |
| TCAGACCCATTGGTATGCAC+AGG | - | chr6.4:48882710-48882729 | MS.gene72606:CDS | 50.0% | |
| TTCCGGCAAAGATTGTGCCA+TGG | - | chr6.4:48877622-48877641 | MS.gene72606:CDS | 50.0% | |
| ! | GGTGGTAGTGATGGTTTGCA+TGG | - | chr6.4:48881003-48881022 | MS.gene72606:intron | 50.0% |
| !! | GAAGAGTGGTGGTGTTGGTA+TGG | - | chr6.4:48877644-48877663 | MS.gene72606:CDS | 50.0% |
| !!! | CGCAACCGTGATTTTGGCTA+TGG | + | chr6.4:48878489-48878508 | None:intergenic | 50.0% |
| ACCTAGGCACCTCACAGATG+AGG | - | chr6.4:48880391-48880410 | MS.gene72606:intron | 55.0% | |
| ATTTCGCGATGAGAGCCTCC+GGG | + | chr6.4:48882688-48882707 | None:intergenic | 55.0% | |
| CACAGACACTGGACACGACA+CGG | + | chr6.4:48878085-48878104 | None:intergenic | 55.0% | |
| CACTGACAGACACGGACAAG+AGG | + | chr6.4:48881353-48881372 | None:intergenic | 55.0% | |
| CCAACACCACCACTCTTCCA+TGG | + | chr6.4:48877642-48877661 | None:intergenic | 55.0% | |
| GGTGCCTAGGTCGGTTAACT+AGG | + | chr6.4:48880382-48880401 | None:intergenic | 55.0% | |
| GTTGCCAGTTTCTCGAGACC+CGG | - | chr6.4:48882667-48882686 | MS.gene72606:CDS | 55.0% | |
| TCATCATCACCGGAAAGGCG+CGG | - | chr6.4:48877590-48877609 | MS.gene72606:CDS | 55.0% | |
| TGGTGTCTGACCCGTGTTAG+TGG | - | chr6.4:48881227-48881246 | MS.gene72606:intron | 55.0% | |
| ! | ACGGTCCGCAACCGTGATTT+TGG | + | chr6.4:48878495-48878514 | None:intergenic | 55.0% |
| ! | CATCTGTGAGGTGCCTAGGT+CGG | + | chr6.4:48880391-48880410 | None:intergenic | 55.0% |
| ! | CCATGGAAGAGTGGTGGTGT+TGG | - | chr6.4:48877639-48877658 | MS.gene72606:CDS | 55.0% |
| ! | TAACACTGCCGCATCGATGC+TGG | + | chr6.4:48881321-48881340 | None:intergenic | 55.0% |
| !! | GTCGGTGTTGGCCACTAACA+CGG | + | chr6.4:48881241-48881260 | None:intergenic | 55.0% |
| !! | TCGGTGTTGGCCACTAACAC+GGG | + | chr6.4:48881240-48881259 | None:intergenic | 55.0% |
| AGCTAGGCACGGACACTCCT+CGG | - | chr6.4:48877942-48877961 | MS.gene72606:intron | 60.0% | |
| GAGGTCTCGGGTTCGATTCC+CGG | - | chr6.4:48880742-48880761 | MS.gene72606:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr6.4:48877948-48877967 | MS.gene72606:intron | 60.0% | |
| ! | GCCTCATCTGTGAGGTGCCT+AGG | + | chr6.4:48880395-48880414 | None:intergenic | 60.0% |
| GCCAGTTTCTCGAGACCCGG+AGG | - | chr6.4:48882670-48882689 | MS.gene72606:CDS | 65.0% | |
| GCCTCCGGGTCTCGAGAAAC+TGG | + | chr6.4:48882674-48882693 | None:intergenic | 65.0% | |
| ! | TCATCACCGGAAAGGCGCGG+TGG | - | chr6.4:48877593-48877612 | MS.gene72606:CDS | 65.0% |
| AGGCGCGGTGGTGCGCGTTC+CGG | - | chr6.4:48877605-48877624 | MS.gene72606:CDS | 75.0% | |
| CGCGCACCACCGCGCCTTTC+CGG | + | chr6.4:48877602-48877621 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 48877414 | 48883003 | 48877414 | ID=MS.gene72606 |
| chr6.4 | mRNA | 48877414 | 48883003 | 48877414 | ID=MS.gene72606.t1;Parent=MS.gene72606 |
| chr6.4 | exon | 48882588 | 48883003 | 48882588 | ID=MS.gene72606.t1.exon1;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48882588 | 48883003 | 48882588 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| chr6.4 | exon | 48881493 | 48881531 | 48881493 | ID=MS.gene72606.t1.exon2;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48881493 | 48881531 | 48881493 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| chr6.4 | exon | 48881328 | 48881398 | 48881328 | ID=MS.gene72606.t1.exon3;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48881328 | 48881398 | 48881328 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| chr6.4 | exon | 48879355 | 48879419 | 48879355 | ID=MS.gene72606.t1.exon4;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48879355 | 48879419 | 48879355 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| chr6.4 | exon | 48878660 | 48878749 | 48878660 | ID=MS.gene72606.t1.exon5;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48878660 | 48878749 | 48878660 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| chr6.4 | exon | 48878477 | 48878569 | 48878477 | ID=MS.gene72606.t1.exon6;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48878477 | 48878569 | 48878477 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| chr6.4 | exon | 48877414 | 48877815 | 48877414 | ID=MS.gene72606.t1.exon7;Parent=MS.gene72606.t1 |
| chr6.4 | CDS | 48877414 | 48877815 | 48877414 | ID=cds.MS.gene72606.t1;Parent=MS.gene72606.t1 |
| Gene Sequence |
| Protein sequence |
