Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71828.t1 | RDX98798.1 | 81.6 | 667 | 119 | 1 | 22 | 684 | 30 | 696 | 2.70E-303 | 1050.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71828.t1 | Q9C942 | 35.0 | 283 | 181 | 3 | 93 | 374 | 36 | 316 | 1.9e-42 | 175.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71828.t1 | A0A371H7M9 | 81.6 | 667 | 119 | 1 | 22 | 684 | 30 | 696 | 2.0e-303 | 1050.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene71828 | 0.806211 | 9.18E-50 | -1.69E-46 |
MS.gene049283 | MS.gene71828 | 0.845811 | 3.22E-59 | -1.69E-46 |
MS.gene049419 | MS.gene71828 | -0.836677 | 8.13E-57 | -1.69E-46 |
MS.gene049499 | MS.gene71828 | 0.845117 | 4.96E-59 | -1.69E-46 |
MS.gene049983 | MS.gene71828 | 0.836004 | 1.21E-56 | -1.69E-46 |
MS.gene050559 | MS.gene71828 | 0.806728 | 7.15E-50 | -1.69E-46 |
MS.gene050561 | MS.gene71828 | 0.80785 | 4.13E-50 | -1.69E-46 |
MS.gene050562 | MS.gene71828 | 0.811621 | 6.39E-51 | -1.69E-46 |
MS.gene050654 | MS.gene71828 | 0.81599 | 6.97E-52 | -1.69E-46 |
MS.gene051332 | MS.gene71828 | 0.811215 | 7.83E-51 | -1.69E-46 |
MS.gene051541 | MS.gene71828 | 0.802847 | 4.62E-49 | -1.69E-46 |
MS.gene051699 | MS.gene71828 | 0.818389 | 2.01E-52 | -1.69E-46 |
MS.gene052037 | MS.gene71828 | 0.81835 | 2.05E-52 | -1.69E-46 |
MS.gene052052 | MS.gene71828 | 0.806971 | 6.35E-50 | -1.69E-46 |
MS.gene052118 | MS.gene71828 | 0.837316 | 5.59E-57 | -1.69E-46 |
MS.gene052463 | MS.gene71828 | 0.814076 | 1.85E-51 | -1.69E-46 |
MS.gene052493 | MS.gene71828 | 0.849018 | 4.23E-60 | -1.69E-46 |
MS.gene052518 | MS.gene71828 | 0.809973 | 1.45E-50 | -1.69E-46 |
MS.gene052674 | MS.gene71828 | 0.810165 | 1.32E-50 | -1.69E-46 |
MS.gene052675 | MS.gene71828 | 0.809215 | 2.11E-50 | -1.69E-46 |
MS.gene052677 | MS.gene71828 | 0.808191 | 3.50E-50 | -1.69E-46 |
MS.gene052685 | MS.gene71828 | 0.821933 | 3.10E-53 | -1.69E-46 |
MS.gene052686 | MS.gene71828 | 0.825905 | 3.63E-54 | -1.69E-46 |
MS.gene053298 | MS.gene71828 | 0.815374 | 9.55E-52 | -1.69E-46 |
MS.gene05350 | MS.gene71828 | 0.806411 | 8.33E-50 | -1.69E-46 |
MS.gene053963 | MS.gene71828 | 0.841193 | 5.51E-58 | -1.69E-46 |
MS.gene054222 | MS.gene71828 | 0.836043 | 1.18E-56 | -1.69E-46 |
MS.gene054479 | MS.gene71828 | 0.845581 | 3.72E-59 | -1.69E-46 |
MS.gene054489 | MS.gene71828 | 0.803484 | 3.41E-49 | -1.69E-46 |
MS.gene054641 | MS.gene71828 | 0.831425 | 1.68E-55 | -1.69E-46 |
MS.gene054892 | MS.gene71828 | 0.865911 | 4.19E-65 | -1.69E-46 |
MS.gene054893 | MS.gene71828 | 0.865176 | 7.14E-65 | -1.69E-46 |
MS.gene054957 | MS.gene71828 | 0.803816 | 2.91E-49 | -1.69E-46 |
MS.gene055141 | MS.gene71828 | 0.802842 | 4.63E-49 | -1.69E-46 |
MS.gene055229 | MS.gene71828 | 0.839531 | 1.50E-57 | -1.69E-46 |
MS.gene055231 | MS.gene71828 | 0.811772 | 5.92E-51 | -1.69E-46 |
MS.gene055864 | MS.gene71828 | 0.832723 | 8.03E-56 | -1.69E-46 |
MS.gene056174 | MS.gene71828 | 0.809845 | 1.55E-50 | -1.69E-46 |
MS.gene056677 | MS.gene71828 | 0.822171 | 2.73E-53 | -1.69E-46 |
MS.gene056699 | MS.gene71828 | 0.821117 | 4.79E-53 | -1.69E-46 |
MS.gene056751 | MS.gene71828 | 0.808533 | 2.96E-50 | -1.69E-46 |
MS.gene056779 | MS.gene71828 | 0.809403 | 1.93E-50 | -1.69E-46 |
MS.gene05686 | MS.gene71828 | 0.820983 | 5.14E-53 | -1.69E-46 |
MS.gene05690 | MS.gene71828 | 0.803973 | 2.70E-49 | -1.69E-46 |
MS.gene057102 | MS.gene71828 | 0.80423 | 2.39E-49 | -1.69E-46 |
MS.gene057208 | MS.gene71828 | 0.818678 | 1.73E-52 | -1.69E-46 |
MS.gene058008 | MS.gene71828 | 0.808364 | 3.21E-50 | -1.69E-46 |
MS.gene058095 | MS.gene71828 | 0.808556 | 2.92E-50 | -1.69E-46 |
MS.gene058159 | MS.gene71828 | 0.87729 | 7.08E-69 | -1.69E-46 |
MS.gene058223 | MS.gene71828 | -0.803984 | 2.68E-49 | -1.69E-46 |
MS.gene058429 | MS.gene71828 | 0.839243 | 1.78E-57 | -1.69E-46 |
MS.gene058592 | MS.gene71828 | 0.80875 | 2.66E-50 | -1.69E-46 |
MS.gene05878 | MS.gene71828 | 0.812732 | 3.66E-51 | -1.69E-46 |
MS.gene059144 | MS.gene71828 | 0.801575 | 8.44E-49 | -1.69E-46 |
MS.gene059170 | MS.gene71828 | 0.818674 | 1.73E-52 | -1.69E-46 |
MS.gene05952 | MS.gene71828 | 0.864074 | 1.58E-64 | -1.69E-46 |
MS.gene05956 | MS.gene71828 | 0.811061 | 8.45E-51 | -1.69E-46 |
MS.gene059774 | MS.gene71828 | 0.808154 | 3.56E-50 | -1.69E-46 |
MS.gene05985 | MS.gene71828 | -0.828092 | 1.09E-54 | -1.69E-46 |
MS.gene060012 | MS.gene71828 | 0.845868 | 3.11E-59 | -1.69E-46 |
MS.gene060259 | MS.gene71828 | 0.835 | 2.16E-56 | -1.69E-46 |
MS.gene060412 | MS.gene71828 | 0.815712 | 8.03E-52 | -1.69E-46 |
MS.gene060413 | MS.gene71828 | 0.808872 | 2.50E-50 | -1.69E-46 |
MS.gene060435 | MS.gene71828 | 0.812301 | 4.54E-51 | -1.69E-46 |
MS.gene060697 | MS.gene71828 | 0.806603 | 7.59E-50 | -1.69E-46 |
MS.gene060777 | MS.gene71828 | 0.854518 | 1.17E-61 | -1.69E-46 |
MS.gene060785 | MS.gene71828 | 0.829104 | 6.20E-55 | -1.69E-46 |
MS.gene060840 | MS.gene71828 | 0.822736 | 2.02E-53 | -1.69E-46 |
MS.gene060851 | MS.gene71828 | 0.807727 | 4.39E-50 | -1.69E-46 |
MS.gene060852 | MS.gene71828 | 0.805483 | 1.31E-49 | -1.69E-46 |
MS.gene060932 | MS.gene71828 | 0.847828 | 9.03E-60 | -1.69E-46 |
MS.gene060933 | MS.gene71828 | 0.805302 | 1.43E-49 | -1.69E-46 |
MS.gene060935 | MS.gene71828 | 0.818263 | 2.15E-52 | -1.69E-46 |
MS.gene060937 | MS.gene71828 | 0.837438 | 5.20E-57 | -1.69E-46 |
MS.gene061188 | MS.gene71828 | 0.817767 | 2.78E-52 | -1.69E-46 |
MS.gene06121 | MS.gene71828 | 0.806962 | 6.38E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022183 | MS.gene71828 | PPI |
MS.gene72606 | MS.gene71828 | PPI |
MS.gene042920 | MS.gene71828 | PPI |
MS.gene93966 | MS.gene71828 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71828.t1 | MTR_1g110670 | 89.096 | 376 | 17 | 3 | 1 | 376 | 1 | 352 | 0.0 | 684 |
MS.gene71828.t1 | MTR_1g110690 | 97.419 | 310 | 8 | 0 | 377 | 686 | 17 | 326 | 0.0 | 614 |
MS.gene71828.t1 | MTR_5g056550 | 67.784 | 388 | 111 | 4 | 1 | 376 | 1 | 386 | 0.0 | 559 |
MS.gene71828.t1 | MTR_5g056550 | 62.371 | 388 | 99 | 5 | 1 | 376 | 1 | 353 | 1.08e-172 | 498 |
MS.gene71828.t1 | MTR_7g007260 | 58.410 | 327 | 135 | 1 | 49 | 375 | 7 | 332 | 5.71e-138 | 408 |
MS.gene71828.t1 | MTR_6g018490 | 56.061 | 330 | 144 | 1 | 47 | 376 | 4 | 332 | 3.09e-135 | 401 |
MS.gene71828.t1 | MTR_6g084420 | 53.776 | 331 | 151 | 2 | 47 | 376 | 4 | 333 | 1.40e-127 | 382 |
MS.gene71828.t1 | MTR_7g007260 | 55.657 | 327 | 131 | 2 | 49 | 375 | 7 | 319 | 1.05e-125 | 376 |
MS.gene71828.t1 | MTR_7g007260 | 55.793 | 328 | 130 | 3 | 49 | 375 | 7 | 320 | 6.63e-125 | 374 |
MS.gene71828.t1 | MTR_6g025610 | 60.071 | 283 | 112 | 1 | 94 | 376 | 41 | 322 | 2.23e-121 | 365 |
MS.gene71828.t1 | MTR_5g056550 | 63.710 | 248 | 76 | 4 | 1 | 236 | 1 | 246 | 1.84e-112 | 340 |
MS.gene71828.t1 | MTR_5g056550 | 63.563 | 247 | 76 | 4 | 1 | 235 | 1 | 245 | 1.27e-111 | 337 |
MS.gene71828.t1 | MTR_1g088470 | 45.357 | 280 | 152 | 1 | 97 | 376 | 8 | 286 | 1.03e-81 | 262 |
MS.gene71828.t1 | MTR_7g108770 | 42.857 | 280 | 158 | 1 | 97 | 376 | 8 | 285 | 5.05e-80 | 258 |
MS.gene71828.t1 | MTR_1g115535 | 42.756 | 283 | 161 | 1 | 94 | 376 | 7 | 288 | 3.94e-76 | 247 |
MS.gene71828.t1 | MTR_1g115535 | 41.438 | 292 | 170 | 1 | 85 | 376 | 2 | 292 | 4.05e-76 | 247 |
MS.gene71828.t1 | MTR_6g038150 | 56.422 | 218 | 95 | 0 | 377 | 594 | 17 | 234 | 2.50e-75 | 253 |
MS.gene71828.t1 | MTR_8g074540 | 52.551 | 196 | 93 | 0 | 377 | 572 | 31 | 226 | 2.45e-70 | 235 |
MS.gene71828.t1 | MTR_4g089170 | 39.852 | 271 | 163 | 0 | 105 | 375 | 47 | 317 | 2.35e-64 | 216 |
MS.gene71828.t1 | MTR_6g091690 | 53.763 | 186 | 86 | 0 | 377 | 562 | 11 | 196 | 1.06e-63 | 229 |
MS.gene71828.t1 | MTR_1g095110 | 34.333 | 300 | 181 | 6 | 90 | 375 | 12 | 309 | 6.27e-51 | 180 |
MS.gene71828.t1 | MTR_8g074540 | 52.318 | 151 | 72 | 0 | 422 | 572 | 2 | 152 | 7.26e-51 | 181 |
MS.gene71828.t1 | MTR_4g127220 | 36.940 | 268 | 167 | 2 | 108 | 374 | 41 | 307 | 1.73e-49 | 176 |
MS.gene71828.t1 | MTR_4g081350 | 33.333 | 318 | 194 | 6 | 377 | 685 | 11 | 319 | 1.77e-43 | 161 |
MS.gene71828.t1 | MTR_4g081350 | 43.713 | 167 | 93 | 1 | 377 | 543 | 11 | 176 | 4.35e-42 | 157 |
MS.gene71828.t1 | MTR_6g091690 | 55.385 | 130 | 58 | 0 | 433 | 562 | 2 | 131 | 2.00e-41 | 162 |
MS.gene71828.t1 | MTR_1g111210 | 41.317 | 167 | 97 | 1 | 378 | 543 | 19 | 185 | 2.19e-35 | 138 |
MS.gene71828.t1 | MTR_2g090230 | 40.854 | 164 | 97 | 0 | 377 | 540 | 3 | 166 | 2.30e-35 | 142 |
MS.gene71828.t1 | MTR_1g110680 | 69.072 | 97 | 26 | 1 | 279 | 375 | 6 | 98 | 3.79e-35 | 129 |
MS.gene71828.t1 | MTR_6g071475 | 34.752 | 282 | 174 | 8 | 95 | 375 | 112 | 384 | 2.26e-32 | 130 |
MS.gene71828.t1 | MTR_7g407010 | 39.623 | 159 | 96 | 0 | 378 | 536 | 13 | 171 | 1.65e-31 | 128 |
MS.gene71828.t1 | MTR_4g038310 | 34.158 | 202 | 128 | 1 | 377 | 578 | 14 | 210 | 2.72e-30 | 125 |
MS.gene71828.t1 | MTR_3g109870 | 31.387 | 274 | 159 | 8 | 105 | 376 | 103 | 349 | 3.97e-28 | 116 |
MS.gene71828.t1 | MTR_2g090230 | 40.000 | 125 | 75 | 0 | 416 | 540 | 2 | 126 | 1.82e-25 | 111 |
MS.gene71828.t1 | MTR_2g102030 | 32.738 | 168 | 104 | 1 | 377 | 544 | 14 | 172 | 2.43e-24 | 107 |
MS.gene71828.t1 | MTR_4g012540 | 31.579 | 209 | 130 | 6 | 391 | 599 | 1 | 196 | 7.41e-23 | 100 |
MS.gene71828.t1 | MTR_8g103540 | 28.402 | 169 | 112 | 1 | 377 | 545 | 14 | 173 | 1.47e-18 | 90.5 |
MS.gene71828.t1 | MTR_6g086635 | 28.638 | 213 | 134 | 3 | 377 | 580 | 14 | 217 | 1.59e-16 | 84.0 |
MS.gene71828.t1 | MTR_7g098540 | 27.742 | 155 | 107 | 2 | 390 | 544 | 35 | 184 | 1.32e-13 | 70.9 |
MS.gene71828.t1 | MTR_7g096450 | 25.974 | 154 | 105 | 2 | 456 | 600 | 4 | 157 | 2.61e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71828.t1 | AT1G77420 | 64.793 | 338 | 119 | 0 | 39 | 376 | 36 | 373 | 6.69e-162 | 471 |
MS.gene71828.t1 | AT5G16120 | 58.282 | 326 | 135 | 1 | 51 | 376 | 10 | 334 | 4.38e-136 | 404 |
MS.gene71828.t1 | AT5G16120 | 58.282 | 326 | 135 | 1 | 51 | 376 | 10 | 334 | 4.38e-136 | 404 |
MS.gene71828.t1 | AT5G16120 | 58.282 | 326 | 135 | 1 | 51 | 376 | 28 | 352 | 1.00e-135 | 403 |
MS.gene71828.t1 | AT5G16120 | 58.282 | 326 | 135 | 1 | 51 | 376 | 42 | 366 | 1.50e-135 | 404 |
MS.gene71828.t1 | AT1G25420 | 60.197 | 304 | 107 | 4 | 377 | 678 | 17 | 308 | 2.10e-108 | 331 |
MS.gene71828.t1 | AT1G25420 | 59.386 | 293 | 105 | 4 | 388 | 678 | 1 | 281 | 2.37e-101 | 312 |
MS.gene71828.t1 | AT2G39420 | 43.816 | 283 | 158 | 1 | 94 | 376 | 8 | 289 | 2.18e-77 | 250 |
MS.gene71828.t1 | AT2G39410 | 44.876 | 283 | 155 | 1 | 94 | 376 | 8 | 289 | 3.54e-77 | 250 |
MS.gene71828.t1 | AT1G34220 | 55.556 | 225 | 97 | 1 | 377 | 598 | 17 | 241 | 4.30e-77 | 259 |
MS.gene71828.t1 | AT3G62860 | 40.714 | 280 | 164 | 1 | 97 | 376 | 9 | 286 | 6.19e-77 | 250 |
MS.gene71828.t1 | AT2G47630 | 42.143 | 280 | 162 | 0 | 97 | 376 | 9 | 288 | 8.92e-76 | 247 |
MS.gene71828.t1 | AT1G25420 | 55.378 | 251 | 98 | 4 | 430 | 678 | 2 | 240 | 3.67e-74 | 240 |
MS.gene71828.t1 | AT1G25420 | 55.378 | 251 | 98 | 4 | 430 | 678 | 2 | 240 | 3.67e-74 | 240 |
MS.gene71828.t1 | AT1G11090 | 42.958 | 284 | 162 | 0 | 93 | 376 | 26 | 309 | 7.97e-74 | 241 |
MS.gene71828.t1 | AT3G55180 | 42.403 | 283 | 163 | 0 | 94 | 376 | 2 | 284 | 5.01e-73 | 239 |
MS.gene71828.t1 | AT1G34220 | 49.020 | 255 | 97 | 2 | 377 | 598 | 17 | 271 | 6.32e-71 | 243 |
MS.gene71828.t1 | AT2G39400 | 41.343 | 283 | 165 | 1 | 94 | 376 | 2 | 283 | 4.98e-70 | 231 |
MS.gene71828.t1 | AT4G35730 | 52.041 | 196 | 94 | 0 | 377 | 572 | 31 | 226 | 9.79e-68 | 230 |
MS.gene71828.t1 | AT3G62860 | 41.079 | 241 | 142 | 0 | 136 | 376 | 3 | 243 | 7.25e-66 | 219 |
MS.gene71828.t1 | AT2G47630 | 43.043 | 230 | 131 | 0 | 147 | 376 | 14 | 243 | 8.70e-62 | 209 |
MS.gene71828.t1 | AT2G47630 | 43.043 | 230 | 131 | 0 | 147 | 376 | 34 | 263 | 1.62e-61 | 209 |
MS.gene71828.t1 | AT3G55190 | 38.710 | 279 | 169 | 2 | 98 | 375 | 12 | 289 | 2.35e-60 | 205 |
MS.gene71828.t1 | AT5G14980 | 35.018 | 277 | 177 | 3 | 100 | 375 | 35 | 309 | 3.82e-54 | 189 |
MS.gene71828.t1 | AT4G29440 | 48.521 | 169 | 87 | 0 | 377 | 545 | 14 | 182 | 2.77e-53 | 199 |
MS.gene71828.t1 | AT2G19710 | 38.769 | 325 | 169 | 6 | 377 | 673 | 14 | 336 | 6.76e-52 | 194 |
MS.gene71828.t1 | AT5G19290 | 34.545 | 275 | 178 | 2 | 103 | 376 | 38 | 311 | 1.03e-50 | 179 |
MS.gene71828.t1 | AT1G52760 | 35.357 | 280 | 173 | 3 | 102 | 374 | 38 | 316 | 2.23e-49 | 176 |
MS.gene71828.t1 | AT2G39400 | 38.914 | 221 | 134 | 1 | 94 | 314 | 2 | 221 | 1.28e-47 | 168 |
MS.gene71828.t1 | AT4G29440 | 48.366 | 153 | 79 | 0 | 393 | 545 | 2 | 154 | 6.51e-47 | 179 |
MS.gene71828.t1 | AT5G11650 | 36.496 | 274 | 160 | 8 | 105 | 375 | 110 | 372 | 6.44e-39 | 149 |
MS.gene71828.t1 | AT1G73480 | 34.944 | 269 | 157 | 8 | 105 | 367 | 194 | 450 | 1.67e-36 | 143 |
MS.gene71828.t1 | AT1G18360 | 35.556 | 270 | 162 | 7 | 105 | 370 | 112 | 373 | 2.41e-35 | 138 |
MS.gene71828.t1 | AT1G13340 | 32.778 | 180 | 119 | 1 | 378 | 555 | 19 | 198 | 4.69e-29 | 120 |
MS.gene71828.t1 | AT1G79910 | 31.953 | 169 | 106 | 1 | 377 | 545 | 14 | 173 | 1.11e-25 | 110 |
MS.gene71828.t1 | AT2G14830 | 33.333 | 165 | 110 | 0 | 377 | 541 | 14 | 178 | 1.22e-25 | 110 |
MS.gene71828.t1 | AT1G52315 | 30.189 | 159 | 101 | 3 | 387 | 544 | 24 | 173 | 5.36e-22 | 98.6 |
MS.gene71828.t1 | AT1G79910 | 35.714 | 126 | 72 | 1 | 420 | 545 | 2 | 118 | 7.66e-22 | 97.8 |
MS.gene71828.t1 | AT1G79910 | 36.585 | 123 | 69 | 1 | 423 | 545 | 46 | 159 | 2.80e-21 | 96.7 |
MS.gene71828.t1 | AT5G11650 | 35.500 | 200 | 110 | 9 | 105 | 297 | 110 | 297 | 9.68e-21 | 94.0 |
MS.gene71828.t1 | AT2G39410 | 41.935 | 93 | 53 | 1 | 97 | 189 | 11 | 102 | 3.02e-20 | 87.4 |
MS.gene71828.t1 | AT4G32350 | 27.381 | 168 | 113 | 1 | 378 | 545 | 15 | 173 | 2.49e-17 | 86.7 |
MS.gene71828.t1 | AT4G32350 | 27.381 | 168 | 113 | 1 | 378 | 545 | 15 | 173 | 2.49e-17 | 86.7 |
MS.gene71828.t1 | AT1G52315 | 31.304 | 115 | 69 | 3 | 431 | 544 | 18 | 123 | 1.62e-15 | 78.2 |
MS.gene71828.t1 | AT1G51900 | 31.847 | 157 | 102 | 3 | 386 | 538 | 25 | 180 | 1.92e-13 | 74.3 |
MS.gene71828.t1 | AT3G15490 | 28.788 | 132 | 91 | 1 | 399 | 527 | 2 | 133 | 6.65e-13 | 68.9 |
Find 120 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTGTTTACTACTAAATA+TGG | 0.150771 | 1.3:+75406303 | MS.gene71828:CDS |
ATGGGCTGCATATGAAATTT+TGG | 0.213582 | 1.3:+75404277 | MS.gene71828:CDS |
CTAAAACTGCAGCAGAATTT+AGG | 0.215309 | 1.3:+75406601 | MS.gene71828:CDS |
TACTTCTGACTCTCAATTAT+AGG | 0.241660 | 1.3:-75404332 | None:intergenic |
TTCTTTCTAACAATAATTCT+TGG | 0.251948 | 1.3:+75407942 | MS.gene71828:CDS |
ATTTCAATCCTCTGATATAT+TGG | 0.254871 | 1.3:+75408039 | MS.gene71828:CDS |
TCATTCGAGAACAAAATATA+TGG | 0.266370 | 1.3:+75404258 | MS.gene71828:CDS |
GCTCCATTATTGATACTTCA+TGG | 0.274482 | 1.3:+75401137 | MS.gene71828:CDS |
AGGAGGTTACCATGGCATTT+TGG | 0.302834 | 1.3:+75401247 | MS.gene71828:CDS |
TTGCATTCACTCTCAGTCTC+AGG | 0.316151 | 1.3:-75398706 | None:intergenic |
ACTTGCACTTTCTTCTTTGA+AGG | 0.335129 | 1.3:+75399538 | MS.gene71828:CDS |
TCTGAACTTCGTCCTGATTC+AGG | 0.335446 | 1.3:+75406348 | MS.gene71828:CDS |
TTGATTGGAACGCCATGTTC+TGG | 0.338027 | 1.3:-75399481 | None:intergenic |
ACCATGAGATGATGTCATTA+TGG | 0.339733 | 1.3:-75401301 | None:intergenic |
GCAATGGATTTCCCAGGTTT+CGG | 0.351323 | 1.3:+75399672 | MS.gene71828:CDS |
GCTCCATGAAGTATCAATAA+TGG | 0.356305 | 1.3:-75401140 | None:intergenic |
AAGAACCAATTGCTAGAATT+CGG | 0.357696 | 1.3:+75404138 | MS.gene71828:CDS |
ATTTATATTCGGACAGTCAA+TGG | 0.361185 | 1.3:+75400185 | MS.gene71828:CDS |
TAAAGAAACTGGCTCACTAA+TGG | 0.370262 | 1.3:-75401182 | None:intergenic |
AGAACCCGGCAAGAGAAAAT+TGG | 0.374826 | 1.3:+75400809 | MS.gene71828:CDS |
ATGCTTTCTCATAAAGAAAC+TGG | 0.376112 | 1.3:-75401193 | None:intergenic |
GATTTGCCGCAATTTATATT+CGG | 0.378150 | 1.3:+75400174 | MS.gene71828:CDS |
TGCTCTTAAAGCTCATTTGA+AGG | 0.379148 | 1.3:+75400218 | MS.gene71828:CDS |
ATGACAACGACACTCCGATT+TGG | 0.395939 | 1.3:+75398617 | MS.gene71828:CDS |
TGATATTGGATTATGGTGTA+AGG | 0.399930 | 1.3:-75398663 | None:intergenic |
GTGCGATTCACGCCTGAATC+AGG | 0.402265 | 1.3:-75406360 | None:intergenic |
ATTACCCGAATTCTAGCAAT+TGG | 0.402690 | 1.3:-75404143 | None:intergenic |
ACAGAAGAAATTCTTTCATC+AGG | 0.403357 | 1.3:-75401278 | None:intergenic |
ATGACTCCGTCCCAATCATT+TGG | 0.412702 | 1.3:-75400243 | None:intergenic |
ATTTGAAGGAACCAAATGAT+TGG | 0.414265 | 1.3:+75400232 | MS.gene71828:CDS |
CTTTCAGTTAGTGCTCCATC+TGG | 0.420640 | 1.3:+75406516 | MS.gene71828:CDS |
TCACTTGCACATAGTGACTT+TGG | 0.422099 | 1.3:+75408124 | MS.gene71828:CDS |
GATTATGGTGTAAGGGTAAA+GGG | 0.427866 | 1.3:-75398655 | None:intergenic |
AGAACCAATTGCTAGAATTC+GGG | 0.432063 | 1.3:+75404139 | MS.gene71828:CDS |
TAGAAAGAATAGAAGCTTCA+AGG | 0.433370 | 1.3:-75407928 | None:intergenic |
ACTTGTTTACTACTAAATAT+GGG | 0.437025 | 1.3:+75406304 | MS.gene71828:CDS |
TGAAAGGAATTCAAGGGGAT+TGG | 0.438456 | 1.3:+75399435 | MS.gene71828:CDS |
GGTGTAAGGGTAAAGGGAAA+TGG | 0.442389 | 1.3:-75398649 | None:intergenic |
ACTTGATCATATCTTATTCA+AGG | 0.446112 | 1.3:+75398847 | MS.gene71828:CDS |
CTCATCACTGATACCTTCAA+TGG | 0.450967 | 1.3:-75398741 | None:intergenic |
TGCATTCACTCTCAGTCTCA+GGG | 0.454337 | 1.3:-75398705 | None:intergenic |
AACACCTTCAAGATTGTAGT+TGG | 0.461576 | 1.3:-75400714 | None:intergenic |
GAACATGGCGTTCCAATCAA+AGG | 0.465267 | 1.3:+75399484 | MS.gene71828:CDS |
AACATGGCGTTCCAATCAAA+GGG | 0.467021 | 1.3:+75399485 | MS.gene71828:CDS |
CCTTCAGATAAACCGAAACC+TGG | 0.470797 | 1.3:-75399684 | None:intergenic |
TTTGAAGGAACCAAATGATT+GGG | 0.476356 | 1.3:+75400233 | MS.gene71828:CDS |
TTCTTGATGTGCAATAAGTC+TGG | 0.476632 | 1.3:-75406282 | None:intergenic |
CCAGGTTTCGGTTTATCTGA+AGG | 0.476945 | 1.3:+75399684 | MS.gene71828:CDS |
CCTTGTAGCTCCAATGTGTA+AGG | 0.478506 | 1.3:+75400266 | MS.gene71828:CDS |
GATCAAACACGATTAAGAAC+TGG | 0.479472 | 1.3:+75400954 | MS.gene71828:CDS |
GGATTATGGTGTAAGGGTAA+AGG | 0.480388 | 1.3:-75398656 | None:intergenic |
CTATAATAGACTGCACCTGC+TGG | 0.486422 | 1.3:+75398973 | MS.gene71828:intron |
ATCAAGGTTAAGAGAAGCTA+TGG | 0.486484 | 1.3:-75398771 | None:intergenic |
ACCGCCAACTACAATCTTGA+AGG | 0.491450 | 1.3:+75400710 | MS.gene71828:CDS |
TGCGGCAAATCCCTCACCTC+TGG | 0.492405 | 1.3:-75400162 | None:intergenic |
CATTCGAGAACAAAATATAT+GGG | 0.494027 | 1.3:+75404259 | MS.gene71828:CDS |
AGTTCAGATAGATCCTTGTA+TGG | 0.502102 | 1.3:-75400777 | None:intergenic |
TTGGTTATCAGTGGTATGAA+AGG | 0.504463 | 1.3:+75399419 | MS.gene71828:intron |
TTTATATTCGGACAGTCAAT+GGG | 0.504492 | 1.3:+75400186 | MS.gene71828:CDS |
GGTTTATCTGAAGGATTACA+TGG | 0.507433 | 1.3:+75399693 | MS.gene71828:CDS |
GATAAAACTCAAGGTCTTGA+CGG | 0.511590 | 1.3:+75406542 | MS.gene71828:CDS |
GATATTGGATTATGGTGTAA+GGG | 0.515166 | 1.3:-75398662 | None:intergenic |
GTTTATGCAATGGATTTCCC+AGG | 0.516962 | 1.3:+75399666 | MS.gene71828:CDS |
TGCACGATTTGCAGAAGCTA+TGG | 0.518629 | 1.3:-75408077 | None:intergenic |
TGACTTTGGATCATTGAAGC+TGG | 0.520410 | 1.3:+75408138 | MS.gene71828:CDS |
TACGAGAAGGTGCATGATCA+AGG | 0.526915 | 1.3:-75398787 | None:intergenic |
TGGATTTGGTGTTTATGCAA+TGG | 0.528835 | 1.3:+75399656 | MS.gene71828:CDS |
CAGAAGAATACAATCTAGCA+TGG | 0.533676 | 1.3:+75406571 | MS.gene71828:CDS |
CCTTACACATTGGAGCTACA+AGG | 0.538468 | 1.3:-75400266 | None:intergenic |
TGCGTGAAATTGCGAGGTTG+AGG | 0.541893 | 1.3:-75404037 | None:intergenic |
TCTTGAGTTATGATCCCAGC+AGG | 0.541950 | 1.3:-75398988 | None:intergenic |
AGTGGTATGAAAGGAATTCA+AGG | 0.543776 | 1.3:+75399428 | MS.gene71828:intron |
TCGACTAAATCATCAAAACT+TGG | 0.545949 | 1.3:-75399723 | None:intergenic |
ACTTCATGGAGCAGAAGATA+AGG | 0.548587 | 1.3:+75401151 | MS.gene71828:CDS |
ATGGCTTCTCGCAATTCCGA+CGG | 0.549527 | 1.3:-75406219 | None:intergenic |
GACAGCTAGACCAGAGGTGA+GGG | 0.549583 | 1.3:+75400152 | MS.gene71828:intron |
GGCAAAACTATTTCCATACA+AGG | 0.558367 | 1.3:+75400764 | MS.gene71828:CDS |
TTGATTGCCAAGATATCAGA+AGG | 0.558672 | 1.3:+75400681 | MS.gene71828:intron |
ACCTTCAAGATTGTAGTTGG+CGG | 0.559875 | 1.3:-75400711 | None:intergenic |
ATAATTGTTCAGGTATTGCA+AGG | 0.560443 | 1.3:+75399619 | MS.gene71828:intron |
AAGACACTAAAGATCTATGA+AGG | 0.565411 | 1.3:+75401227 | MS.gene71828:CDS |
ATCCTCTGATATATTGGAGA+AGG | 0.565767 | 1.3:+75408045 | MS.gene71828:CDS |
AACACGATTAAGAACTGGCA+TGG | 0.566445 | 1.3:+75400959 | MS.gene71828:CDS |
TCAAGATATTGAGTCACAGT+TGG | 0.570097 | 1.3:+75400998 | MS.gene71828:CDS |
GTGGTATGAAAGGAATTCAA+GGG | 0.572692 | 1.3:+75399429 | MS.gene71828:intron |
TATAATAGACTGCACCTGCT+GGG | 0.586633 | 1.3:+75398974 | MS.gene71828:intron |
ATCTGGAGAGATAAAACTCA+AGG | 0.587410 | 1.3:+75406533 | MS.gene71828:CDS |
TATTGAGTCACAGTTGGAGA+AGG | 0.587825 | 1.3:+75401004 | MS.gene71828:CDS |
ATCTATGAAGGAGGTTACCA+TGG | 0.587933 | 1.3:+75401239 | MS.gene71828:CDS |
TGGCTTCTCGCAATTCCGAC+GGG | 0.590920 | 1.3:-75406218 | None:intergenic |
CTTGTCTAAAATGATGCCAA+AGG | 0.592063 | 1.3:+75400743 | MS.gene71828:CDS |
TTTGGATCATTGAAGCTGGA+AGG | 0.592273 | 1.3:+75408142 | MS.gene71828:CDS |
TCCATAATGACATCATCTCA+TGG | 0.596292 | 1.3:+75401300 | MS.gene71828:CDS |
AAAAGCTGGATGCCAGAACA+TGG | 0.599820 | 1.3:+75399469 | MS.gene71828:CDS |
GGAGCAAAGCAAGTTGGTGT+CGG | 0.600016 | 1.3:+75407800 | MS.gene71828:CDS |
CAGGGTGGAGCAAAGCAAGT+TGG | 0.607429 | 1.3:+75407794 | MS.gene71828:intron |
CTGTGACTCAATATCTTGAG+TGG | 0.612313 | 1.3:-75400994 | None:intergenic |
CAATTATAGGTACACGTGCA+AGG | 0.612342 | 1.3:-75404319 | None:intergenic |
AAGGAACCAAATGATTGGGA+CGG | 0.614530 | 1.3:+75400237 | MS.gene71828:CDS |
GACTGTCCGAATATAAATTG+CGG | 0.618570 | 1.3:-75400180 | None:intergenic |
CTTCAGATAAACCGAAACCT+GGG | 0.619450 | 1.3:-75399683 | None:intergenic |
ACGATTTGCAGAAGCTATGG+CGG | 0.619875 | 1.3:-75408074 | None:intergenic |
CGTTGTCATAGATAGCTCCA+TGG | 0.621711 | 1.3:-75398603 | None:intergenic |
ATATTCGGACAGTCAATGGG+TGG | 0.631708 | 1.3:+75400189 | MS.gene71828:CDS |
AGCCTTCTCCAATATATCAG+AGG | 0.634844 | 1.3:-75408047 | None:intergenic |
TGACAGCTAGACCAGAGGTG+AGG | 0.639641 | 1.3:+75400151 | MS.gene71828:intron |
AATGGACATACCTTACACAT+TGG | 0.639810 | 1.3:-75400276 | None:intergenic |
ACTTCATGCGTGAAATTGCG+AGG | 0.641498 | 1.3:-75404043 | None:intergenic |
GTTCACCTTCCAAAATGCCA+TGG | 0.645530 | 1.3:-75401256 | None:intergenic |
AGAAGAATACAATCTAGCAT+GGG | 0.650670 | 1.3:+75406572 | MS.gene71828:CDS |
TCAACTCAAACAAATGCGGA+AGG | 0.653130 | 1.3:+75404088 | MS.gene71828:CDS |
TGTCGAACATGTCTACGAGA+AGG | 0.657476 | 1.3:-75398800 | None:intergenic |
TTGCTGATGCACATGAGTGA+AGG | 0.663071 | 1.3:-75398825 | None:intergenic |
ACATAATAGGGAATGCCCGT+CGG | 0.666817 | 1.3:+75406203 | MS.gene71828:intron |
TGGTATGAAAGGAATTCAAG+GGG | 0.670152 | 1.3:+75399430 | MS.gene71828:CDS |
TACATTGACAGCTAGACCAG+AGG | 0.671347 | 1.3:+75400146 | MS.gene71828:intron |
ACACTAAAGATCTATGAAGG+AGG | 0.678648 | 1.3:+75401230 | MS.gene71828:CDS |
ATGTTCAACTCAAACAAATG+CGG | 0.693836 | 1.3:+75404084 | MS.gene71828:CDS |
TCTGGTATATCAGAACACCT+AGG | 0.708437 | 1.3:-75406264 | None:intergenic |
ACATGGCGTTCCAATCAAAG+GGG | 0.730927 | 1.3:+75399486 | MS.gene71828:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 75398605 | 75408177 | 75398605 | ID=MS.gene71828 |
chr1.3 | mRNA | 75398605 | 75408177 | 75398605 | ID=MS.gene71828.t1;Parent=MS.gene71828 |
chr1.3 | exon | 75398605 | 75398868 | 75398605 | ID=MS.gene71828.t1.exon1;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75398605 | 75398868 | 75398605 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75398982 | 75399011 | 75398982 | ID=MS.gene71828.t1.exon2;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75398982 | 75399011 | 75398982 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75399430 | 75399559 | 75399430 | ID=MS.gene71828.t1.exon3;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75399430 | 75399559 | 75399430 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75399631 | 75399777 | 75399631 | ID=MS.gene71828.t1.exon4;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75399631 | 75399777 | 75399631 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75400157 | 75400287 | 75400157 | ID=MS.gene71828.t1.exon5;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75400157 | 75400287 | 75400157 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75400693 | 75400830 | 75400693 | ID=MS.gene71828.t1.exon6;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75400693 | 75400830 | 75400693 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75400927 | 75401025 | 75400927 | ID=MS.gene71828.t1.exon7;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75400927 | 75401025 | 75400927 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75401131 | 75401321 | 75401131 | ID=MS.gene71828.t1.exon8;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75401131 | 75401321 | 75401131 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75404028 | 75404160 | 75404028 | ID=MS.gene71828.t1.exon9;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75404028 | 75404160 | 75404028 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75404248 | 75404351 | 75404248 | ID=MS.gene71828.t1.exon10;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75404248 | 75404351 | 75404248 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75406212 | 75406383 | 75406212 | ID=MS.gene71828.t1.exon11;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75406212 | 75406383 | 75406212 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75406504 | 75406644 | 75406504 | ID=MS.gene71828.t1.exon12;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75406504 | 75406644 | 75406504 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
chr1.3 | exon | 75407797 | 75408177 | 75407797 | ID=MS.gene71828.t1.exon13;Parent=MS.gene71828.t1 |
chr1.3 | CDS | 75407797 | 75408177 | 75407797 | ID=cds.MS.gene71828.t1;Parent=MS.gene71828.t1 |
Gene Sequence |
Protein sequence |