Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96656.t1 | XP_003614638.1 | 96.7 | 395 | 13 | 0 | 1 | 395 | 1 | 395 | 1.70E-220 | 775 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96656.t1 | Q9C942 | 35.5 | 290 | 184 | 3 | 103 | 391 | 36 | 323 | 2.5e-47 | 191.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96656.t1 | G7K1K2 | 96.7 | 395 | 13 | 0 | 1 | 395 | 1 | 395 | 1.2e-220 | 775.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04933 | MS.gene96656 | 0.812949 | 3.28E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene96656 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene96656 | 0.803474 | 3.43E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene96656 | 0.831899 | 1.28E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene96656 | 0.819605 | 1.06E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene96656 | 0.826621 | 2.45E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene96656 | 0.844227 | 8.61E-59 | -1.69E-46 |
| MS.gene050763 | MS.gene96656 | 0.845031 | 5.23E-59 | -1.69E-46 |
| MS.gene050780 | MS.gene96656 | 0.806582 | 7.67E-50 | -1.69E-46 |
| MS.gene050826 | MS.gene96656 | 0.827818 | 1.27E-54 | -1.69E-46 |
| MS.gene051568 | MS.gene96656 | 0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene053147 | MS.gene96656 | 0.831521 | 1.59E-55 | -1.69E-46 |
| MS.gene053811 | MS.gene96656 | 0.942473 | 6.75E-102 | -1.69E-46 |
| MS.gene054379 | MS.gene96656 | 0.843569 | 1.29E-58 | -1.69E-46 |
| MS.gene054467 | MS.gene96656 | 0.817755 | 2.80E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene96656 | 0.84017 | 1.02E-57 | -1.69E-46 |
| MS.gene054581 | MS.gene96656 | 0.820048 | 8.42E-53 | -1.69E-46 |
| MS.gene05468 | MS.gene96656 | 0.818344 | 2.06E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene96656 | 0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene96656 | 0.833999 | 3.86E-56 | -1.69E-46 |
| MS.gene05761 | MS.gene96656 | 0.805591 | 1.24E-49 | -1.69E-46 |
| MS.gene057929 | MS.gene96656 | 0.837441 | 5.19E-57 | -1.69E-46 |
| MS.gene059664 | MS.gene96656 | 0.877435 | 6.30E-69 | -1.69E-46 |
| MS.gene060802 | MS.gene96656 | 0.806464 | 8.12E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96656 | MS.gene022183 | PPI |
| MS.gene96656 | MS.gene042920 | PPI |
| MS.gene96656 | MS.gene72606 | PPI |
| MS.gene93966 | MS.gene96656 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96656.t1 | MTR_5g056550 | 96.709 | 395 | 13 | 0 | 1 | 395 | 1 | 395 | 0.0 | 795 |
| MS.gene96656.t1 | MTR_5g056550 | 88.354 | 395 | 13 | 1 | 1 | 395 | 1 | 362 | 0.0 | 709 |
| MS.gene96656.t1 | MTR_1g110670 | 64.810 | 395 | 101 | 5 | 1 | 393 | 1 | 359 | 0.0 | 528 |
| MS.gene96656.t1 | MTR_5g056550 | 94.715 | 246 | 13 | 0 | 1 | 246 | 1 | 246 | 1.10e-178 | 498 |
| MS.gene96656.t1 | MTR_5g056550 | 95.102 | 245 | 12 | 0 | 1 | 245 | 1 | 245 | 2.96e-177 | 493 |
| MS.gene96656.t1 | MTR_7g007260 | 58.610 | 331 | 136 | 1 | 59 | 389 | 7 | 336 | 2.05e-143 | 411 |
| MS.gene96656.t1 | MTR_6g084420 | 54.412 | 340 | 153 | 2 | 57 | 395 | 4 | 342 | 5.36e-140 | 403 |
| MS.gene96656.t1 | MTR_6g018490 | 54.955 | 333 | 149 | 1 | 59 | 391 | 6 | 337 | 5.43e-138 | 397 |
| MS.gene96656.t1 | MTR_7g007260 | 56.495 | 331 | 130 | 2 | 59 | 389 | 7 | 323 | 6.03e-133 | 384 |
| MS.gene96656.t1 | MTR_7g007260 | 56.627 | 332 | 129 | 3 | 59 | 389 | 7 | 324 | 5.53e-132 | 382 |
| MS.gene96656.t1 | MTR_6g025610 | 58.333 | 288 | 119 | 1 | 104 | 391 | 41 | 327 | 6.00e-127 | 369 |
| MS.gene96656.t1 | MTR_1g115535 | 46.207 | 290 | 155 | 1 | 104 | 393 | 11 | 299 | 6.32e-94 | 285 |
| MS.gene96656.t1 | MTR_1g115535 | 46.207 | 290 | 155 | 1 | 104 | 393 | 7 | 295 | 8.85e-94 | 284 |
| MS.gene96656.t1 | MTR_1g088470 | 45.614 | 285 | 154 | 1 | 107 | 391 | 8 | 291 | 2.79e-89 | 273 |
| MS.gene96656.t1 | MTR_7g108770 | 44.170 | 283 | 156 | 1 | 107 | 389 | 8 | 288 | 1.57e-85 | 264 |
| MS.gene96656.t1 | MTR_4g089170 | 39.209 | 278 | 169 | 0 | 115 | 392 | 47 | 324 | 1.97e-71 | 227 |
| MS.gene96656.t1 | MTR_4g127220 | 36.770 | 291 | 181 | 3 | 103 | 392 | 27 | 315 | 1.53e-58 | 194 |
| MS.gene96656.t1 | MTR_1g095110 | 34.532 | 278 | 178 | 4 | 113 | 388 | 37 | 312 | 4.22e-54 | 182 |
| MS.gene96656.t1 | MTR_6g071475 | 33.562 | 292 | 172 | 12 | 107 | 391 | 114 | 390 | 1.05e-32 | 127 |
| MS.gene96656.t1 | MTR_1g110680 | 54.206 | 107 | 45 | 1 | 287 | 393 | 4 | 106 | 2.98e-30 | 112 |
| MS.gene96656.t1 | MTR_3g109870 | 27.500 | 280 | 172 | 9 | 115 | 391 | 103 | 354 | 2.37e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96656.t1 | AT1G77420 | 63.689 | 347 | 126 | 0 | 49 | 395 | 36 | 382 | 1.36e-170 | 482 |
| MS.gene96656.t1 | AT5G16120 | 60.486 | 329 | 129 | 1 | 61 | 389 | 10 | 337 | 7.56e-149 | 426 |
| MS.gene96656.t1 | AT5G16120 | 60.486 | 329 | 129 | 1 | 61 | 389 | 10 | 337 | 7.56e-149 | 426 |
| MS.gene96656.t1 | AT5G16120 | 60.486 | 329 | 129 | 1 | 61 | 389 | 28 | 355 | 1.56e-148 | 425 |
| MS.gene96656.t1 | AT5G16120 | 60.486 | 329 | 129 | 1 | 61 | 389 | 42 | 369 | 2.53e-148 | 425 |
| MS.gene96656.t1 | AT2G39420 | 46.552 | 290 | 154 | 1 | 104 | 393 | 8 | 296 | 5.04e-91 | 277 |
| MS.gene96656.t1 | AT2G39410 | 46.528 | 288 | 153 | 1 | 104 | 391 | 8 | 294 | 1.83e-90 | 275 |
| MS.gene96656.t1 | AT3G62860 | 45.263 | 285 | 154 | 2 | 107 | 391 | 9 | 291 | 1.95e-88 | 271 |
| MS.gene96656.t1 | AT2G47630 | 45.263 | 285 | 156 | 0 | 107 | 391 | 9 | 293 | 1.62e-86 | 266 |
| MS.gene96656.t1 | AT2G39400 | 45.172 | 290 | 158 | 1 | 104 | 393 | 2 | 290 | 7.08e-86 | 263 |
| MS.gene96656.t1 | AT3G55180 | 44.674 | 291 | 161 | 0 | 104 | 394 | 2 | 292 | 2.21e-85 | 262 |
| MS.gene96656.t1 | AT1G11090 | 43.643 | 291 | 164 | 0 | 103 | 393 | 26 | 316 | 1.40e-82 | 256 |
| MS.gene96656.t1 | AT3G62860 | 44.715 | 246 | 136 | 0 | 146 | 391 | 3 | 248 | 1.23e-75 | 237 |
| MS.gene96656.t1 | AT3G55190 | 40.690 | 290 | 169 | 3 | 106 | 394 | 11 | 298 | 7.89e-75 | 236 |
| MS.gene96656.t1 | AT2G47630 | 43.952 | 248 | 139 | 0 | 146 | 393 | 3 | 250 | 2.40e-70 | 223 |
| MS.gene96656.t1 | AT2G47630 | 45.378 | 238 | 130 | 0 | 156 | 393 | 33 | 270 | 6.76e-70 | 223 |
| MS.gene96656.t1 | AT2G39400 | 43.891 | 221 | 123 | 1 | 104 | 324 | 2 | 221 | 1.58e-59 | 194 |
| MS.gene96656.t1 | AT1G52760 | 35.517 | 290 | 184 | 3 | 103 | 391 | 36 | 323 | 5.10e-59 | 195 |
| MS.gene96656.t1 | AT5G14980 | 33.101 | 287 | 189 | 3 | 110 | 395 | 35 | 319 | 5.25e-56 | 187 |
| MS.gene96656.t1 | AT5G19290 | 33.451 | 284 | 187 | 2 | 113 | 395 | 38 | 320 | 3.59e-54 | 182 |
| MS.gene96656.t1 | AT5G11650 | 32.740 | 281 | 173 | 11 | 115 | 391 | 110 | 378 | 8.25e-34 | 130 |
| MS.gene96656.t1 | AT1G73480 | 30.961 | 281 | 180 | 8 | 115 | 392 | 194 | 463 | 7.15e-33 | 129 |
| MS.gene96656.t1 | AT1G18360 | 30.496 | 282 | 181 | 8 | 115 | 392 | 112 | 382 | 1.95e-30 | 120 |
| MS.gene96656.t1 | AT2G39410 | 46.535 | 101 | 53 | 1 | 104 | 204 | 8 | 107 | 5.84e-27 | 104 |
| MS.gene96656.t1 | AT5G11650 | 33.835 | 133 | 82 | 5 | 115 | 245 | 110 | 238 | 4.01e-14 | 72.8 |
Find 69 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGATCATTGCTTGTTTA+AGG | 0.083877 | 5.3:+45491779 | MS.gene96656:CDS |
| CTTCAAAGGGTTGTTGTAAA+TGG | 0.149456 | 5.3:-45491571 | None:intergenic |
| TTGTCTCATGGCTTGATTCT+AGG | 0.244614 | 5.3:+45495044 | MS.gene96656:CDS |
| AAATGGTTACCACTGCATTT+TGG | 0.257020 | 5.3:+45494979 | MS.gene96656:CDS |
| GCTATGGACTATCCAGGTTT+TGG | 0.259890 | 5.3:+45492640 | MS.gene96656:CDS |
| ACTTTAAAACTCTATGAAAA+TGG | 0.263784 | 5.3:+45494962 | MS.gene96656:CDS |
| GCACCATTATTGATTCTTCA+TGG | 0.293013 | 5.3:+45494869 | MS.gene96656:CDS |
| TACAGAAATTTGCTCACTAA+TGG | 0.293286 | 5.3:-45494914 | None:intergenic |
| ATTTGAAGGAGCCAGATAAT+TGG | 0.320173 | 5.3:+45493047 | MS.gene96656:CDS |
| GAGCATTATACACAAATAAA+AGG | 0.327592 | 5.3:+45492724 | MS.gene96656:CDS |
| TTTGGGAAGAGCTTTGCTTT+TGG | 0.337150 | 5.3:-45493978 | None:intergenic |
| AAACAAAGACCTTGCTGAAC+TGG | 0.340152 | 5.3:+45493998 | MS.gene96656:CDS |
| AGAACCGAGTAAAAGAAAAT+TGG | 0.356076 | 5.3:+45494028 | MS.gene96656:CDS |
| AGTTCAGCAAGGTCTTTGTT+TGG | 0.377018 | 5.3:-45493996 | None:intergenic |
| ACATGCACATTCTTCTTTGA+AGG | 0.377141 | 5.3:+45492331 | MS.gene96656:CDS |
| ATCACAGCATCCCAATTATC+TGG | 0.383934 | 5.3:-45493058 | None:intergenic |
| GTTCAGCAAGGTCTTTGTTT+GGG | 0.393636 | 5.3:-45493995 | None:intergenic |
| TTCAAAGGGTTGTTGTAAAT+GGG | 0.394755 | 5.3:-45491570 | None:intergenic |
| TCGACAAGATCATCGAAGTT+TGG | 0.400778 | 5.3:-45492691 | None:intergenic |
| TTCGCTTAAAGTTTATTTGA+AGG | 0.401747 | 5.3:+45493033 | MS.gene96656:CDS |
| TTTGAAGGAGCCAGATAATT+GGG | 0.402919 | 5.3:+45493048 | MS.gene96656:CDS |
| CGAGGTAATTCTCTCATATC+AGG | 0.408211 | 5.3:-45492977 | None:intergenic |
| TCTTCACTCACACCTTCAAT+TGG | 0.413503 | 5.3:-45491672 | None:intergenic |
| GCGAGGAGAATTGCTGCATC+TGG | 0.415251 | 5.3:+45492604 | MS.gene96656:CDS |
| AGGATGTTAAGTTCTTTGAT+TGG | 0.415918 | 5.3:-45491533 | None:intergenic |
| AGTTCTGTTGGGACAGTCAA+TGG | 0.418351 | 5.3:+45493000 | MS.gene96656:CDS |
| ATGGCTTGATTCTAGGTGTT+CGG | 0.424257 | 5.3:+45495051 | MS.gene96656:CDS |
| AACGCCTTCATTACTGCATC+AGG | 0.429805 | 5.3:-45493933 | None:intergenic |
| TGAAAGGAATTCGAGGGGAT+TGG | 0.432685 | 5.3:+45492228 | MS.gene96656:CDS |
| AAATACACAGATGCCTTGAT+TGG | 0.442711 | 5.3:-45492289 | None:intergenic |
| GCTCCATGAAGAATCAATAA+TGG | 0.456411 | 5.3:-45494872 | None:intergenic |
| AGGGTAATTGATTCTTCAAA+GGG | 0.459828 | 5.3:-45491584 | None:intergenic |
| TCGTAACAAATAACATTGTA+AGG | 0.471754 | 5.3:-45494480 | None:intergenic |
| AAGGGTAATTGATTCTTCAA+AGG | 0.472924 | 5.3:-45491585 | None:intergenic |
| AAGAGCTGGATGCCAGAGTC+AGG | 0.476747 | 5.3:+45492262 | MS.gene96656:CDS |
| CTGTTGGGACAGTCAATGGG+TGG | 0.480192 | 5.3:+45493004 | MS.gene96656:CDS |
| GATAATCCACGACTTAAAAC+AGG | 0.483138 | 5.3:+45494504 | MS.gene96656:CDS |
| GTTGGGACAGTCAATGGGTG+GGG | 0.483592 | 5.3:+45493006 | MS.gene96656:CDS |
| TTCTAGAATATGCAAAATCA+AGG | 0.484935 | 5.3:-45491719 | None:intergenic |
| AGAATTACCTCGAGTTCTGT+TGG | 0.487343 | 5.3:+45492988 | MS.gene96656:CDS |
| GAATTACCTCGAGTTCTGTT+GGG | 0.487693 | 5.3:+45492989 | MS.gene96656:CDS |
| ACAGCTTGAATTCTATCATC+AGG | 0.488263 | 5.3:-45495010 | None:intergenic |
| TTGATTGGAGTTCCTGACTC+TGG | 0.493591 | 5.3:-45492274 | None:intergenic |
| AAGAGAAAAGCACCAATTGA+AGG | 0.506066 | 5.3:+45491660 | MS.gene96656:CDS |
| TTCATGATGACATTGTCTCA+TGG | 0.511182 | 5.3:+45495032 | MS.gene96656:CDS |
| TTGTTAAGTAGTGGTATGAA+AGG | 0.518878 | 5.3:+45492212 | MS.gene96656:intron |
| TCTTCTGCTCTGATTCCAGC+AGG | 0.519878 | 5.3:-45492057 | None:intergenic |
| CCTTCTGAAAGTCCAAAACC+TGG | 0.522547 | 5.3:-45492652 | None:intergenic |
| TGTTGGGACAGTCAATGGGT+GGG | 0.525935 | 5.3:+45493005 | MS.gene96656:CDS |
| TTGTTGTAAATGGGAGAGAA+AGG | 0.534571 | 5.3:-45491561 | None:intergenic |
| CGAGGAGAATTGCTGCATCT+GGG | 0.538646 | 5.3:+45492605 | MS.gene96656:CDS |
| GTTCTGTTGGGACAGTCAAT+GGG | 0.540122 | 5.3:+45493001 | MS.gene96656:CDS |
| AATGGGAGAGAAAGGTATGA+AGG | 0.551833 | 5.3:-45491553 | None:intergenic |
| AATTGAGTCAAAAGTAGAGA+AGG | 0.554168 | 5.3:+45494554 | MS.gene96656:CDS |
| GGACTTTCAGAAGGATTGCA+TGG | 0.558308 | 5.3:+45492661 | MS.gene96656:CDS |
| ACCACCTGATGCAGTAATGA+AGG | 0.558767 | 5.3:+45493929 | MS.gene96656:CDS |
| AATGAGCTTACTTTACACAT+TGG | 0.565047 | 5.3:-45493091 | None:intergenic |
| AGAGTCAGGAACTCCAATCA+AGG | 0.570762 | 5.3:+45492276 | MS.gene96656:CDS |
| TCTTCATGGAGCAGCAGACA+AGG | 0.573213 | 5.3:+45494883 | MS.gene96656:CDS |
| TCCACGACTTAAAACAGGCA+TGG | 0.581144 | 5.3:+45494509 | MS.gene96656:CDS |
| GTGGTATGAAAGGAATTCGA+GGG | 0.591527 | 5.3:+45492222 | MS.gene96656:intron |
| CTCTGAAAGCCAGTTCAGCA+AGG | 0.602732 | 5.3:-45494007 | None:intergenic |
| GTATGAAAATGCATCTAGCA+AGG | 0.604169 | 5.3:+45494934 | MS.gene96656:CDS |
| AGTGGTATGAAAGGAATTCG+AGG | 0.622926 | 5.3:+45492221 | MS.gene96656:intron |
| TGGTATGAAAGGAATTCGAG+GGG | 0.632293 | 5.3:+45492223 | MS.gene96656:CDS |
| GACTGTCCCAACAGAACTCG+AGG | 0.633406 | 5.3:-45492995 | None:intergenic |
| TTACAATGTTATTTGTTACG+AGG | 0.659216 | 5.3:+45494482 | MS.gene96656:CDS |
| GCCTTCATTACTGCATCAGG+TGG | 0.660106 | 5.3:-45493930 | None:intergenic |
| GTTCCCCTTCCAAAATGCAG+TGG | 0.684497 | 5.3:-45494988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATCTATATTGTAATAA+TGG | + | chr5.3:45494134-45494153 | MS.gene96656:intron | 10.0% |
| !! | ACACAAAATAAAATAGAAAT+GGG | - | chr5.3:45491973-45491992 | None:intergenic | 15.0% |
| !! | ATTAAACATAATGGTATTAT+TGG | + | chr5.3:45493228-45493247 | MS.gene96656:intron | 15.0% |
| !! | TAAAAAATCAAAAAGTGAAT+AGG | - | chr5.3:45492574-45492593 | None:intergenic | 15.0% |
| !! | TACACAAAATAAAATAGAAA+TGG | - | chr5.3:45491974-45491993 | None:intergenic | 15.0% |
| !!! | AAAAAACAATGAATTTTGTA+TGG | + | chr5.3:45494822-45494841 | MS.gene96656:intron | 15.0% |
| !!! | ATTTGTTGAACATAATAAAA+CGG | - | chr5.3:45492102-45492121 | None:intergenic | 15.0% |
| !!! | TAACTTTTATTTTGTTTGAT+TGG | + | chr5.3:45492153-45492172 | MS.gene96656:intron | 15.0% |
| !!! | TCATTTTTCCAAATTATTAT+CGG | + | chr5.3:45491894-45491913 | MS.gene96656:intron | 15.0% |
| !!! | TCTATTTTCTCAAATATTAT+TGG | - | chr5.3:45492832-45492851 | None:intergenic | 15.0% |
| !!! | TGAAAATGTTTCTTTTATAA+TGG | + | chr5.3:45492422-45492441 | MS.gene96656:intron | 15.0% |
| !! | ACATCAAAAGAAAGTAAAAA+AGG | - | chr5.3:45494607-45494626 | None:intergenic | 20.0% |
| !! | AGAGTCTATATTAAACATAA+TGG | + | chr5.3:45493219-45493238 | MS.gene96656:intron | 20.0% |
| !! | ATAATTATATGTGTTAGTGT+CGG | - | chr5.3:45491863-45491882 | None:intergenic | 20.0% |
| !! | TAAAATAATCTGATACATCT+CGG | - | chr5.3:45493784-45493803 | None:intergenic | 20.0% |
| !! | TTTAACTACAATCTAATCAA+TGG | + | chr5.3:45494254-45494273 | MS.gene96656:intron | 20.0% |
| !!! | ACTTTAAAACTCTATGAAAA+TGG | + | chr5.3:45494962-45494981 | MS.gene96656:CDS | 20.0% |
| !!! | ATTATTGAGTTTTGTTGTAA+AGG | - | chr5.3:45491607-45491626 | None:intergenic | 20.0% |
| !!! | CACTTTTTGATTTTTTATTC+AGG | + | chr5.3:45492577-45492596 | MS.gene96656:intron | 20.0% |
| !!! | TGATTTTATTTGTTAAGTAG+TGG | + | chr5.3:45492203-45492222 | MS.gene96656:intron | 20.0% |
| !!! | TTATTGAGTTTTGTTGTAAA+GGG | - | chr5.3:45491606-45491625 | None:intergenic | 20.0% |
| !!! | TTTGAAGTTTCTTAAAAGTT+GGG | + | chr5.3:45492510-45492529 | MS.gene96656:intron | 20.0% |
| !!! | TTTTGAAGTTTCTTAAAAGT+TGG | + | chr5.3:45492509-45492528 | MS.gene96656:intron | 20.0% |
| ! | ATTAATCTATACCTCTGTTA+AGG | + | chr5.3:45493320-45493339 | MS.gene96656:intron | 25.0% |
| ! | GAGCATTATACACAAATAAA+AGG | + | chr5.3:45492724-45492743 | MS.gene96656:CDS | 25.0% |
| ! | TAATCTGTTTGCTTATTAAC+TGG | + | chr5.3:45493293-45493312 | MS.gene96656:intron | 25.0% |
| ! | TCGTAACAAATAACATTGTA+AGG | - | chr5.3:45494483-45494502 | None:intergenic | 25.0% |
| ! | TCTTTGGATGTTTGTTTATA+GGG | + | chr5.3:45492445-45492464 | MS.gene96656:intron | 25.0% |
| ! | TGATTCATTGTGTGAAAATT+GGG | + | chr5.3:45492475-45492494 | MS.gene96656:intron | 25.0% |
| ! | TTAGAAATGCATATTATGAC+CGG | - | chr5.3:45493725-45493744 | None:intergenic | 25.0% |
| ! | TTAGTTCCTTGTAATATGTA+AGG | + | chr5.3:45493540-45493559 | MS.gene96656:intron | 25.0% |
| ! | TTCGCTTAAAGTTTATTTGA+AGG | + | chr5.3:45493033-45493052 | MS.gene96656:CDS | 25.0% |
| ! | TTGAAGTTTCTTAAAAGTTG+GGG | + | chr5.3:45492511-45492530 | MS.gene96656:intron | 25.0% |
| ! | TTGTAGTTAAACTACAGATA+TGG | - | chr5.3:45494245-45494264 | None:intergenic | 25.0% |
| !! | ATCCTTGTGTTATTCTTTAT+AGG | + | chr5.3:45494455-45494474 | MS.gene96656:intron | 25.0% |
| !! | ATGAATTTTGTATGGTTGAT+TGG | + | chr5.3:45494830-45494849 | MS.gene96656:intron | 25.0% |
| !! | CTAACCAATTTTCTTTTACT+CGG | - | chr5.3:45494035-45494054 | None:intergenic | 25.0% |
| !! | GTTTCTTTTATAATGGTCTT+TGG | + | chr5.3:45492429-45492448 | MS.gene96656:intron | 25.0% |
| !! | TGAATTTTGTATGGTTGATT+GGG | + | chr5.3:45494831-45494850 | MS.gene96656:intron | 25.0% |
| !! | TTACAATGTTATTTGTTACG+AGG | + | chr5.3:45494482-45494501 | MS.gene96656:CDS | 25.0% |
| !!! | ATTTTGCATATTCTAGAAGA+AGG | + | chr5.3:45491724-45491743 | MS.gene96656:CDS | 25.0% |
| !!! | TGATTTGCTCAATTTATTAG+CGG | + | chr5.3:45494721-45494740 | MS.gene96656:intron | 25.0% |
| !!! | TTCTAGAATATGCAAAATCA+AGG | - | chr5.3:45491722-45491741 | None:intergenic | 25.0% |
| !!! | TTTTGCATATTCTAGAAGAA+GGG | + | chr5.3:45491725-45491744 | MS.gene96656:CDS | 25.0% |
| AAAACCCAAACTTCATGTAA+AGG | - | chr5.3:45493582-45493601 | None:intergenic | 30.0% | |
| AAACCCAAACTTCATGTAAA+GGG | - | chr5.3:45493581-45493600 | None:intergenic | 30.0% | |
| AAGAGGTCAAATATGTTTGT+TGG | + | chr5.3:45493510-45493529 | MS.gene96656:intron | 30.0% | |
| AATGAGCTTACTTTACACAT+TGG | - | chr5.3:45493094-45493113 | None:intergenic | 30.0% | |
| AATTGAGTCAAAAGTAGAGA+AGG | + | chr5.3:45494554-45494573 | MS.gene96656:CDS | 30.0% | |
| ACTGATACGTCACAATTTAA+AGG | - | chr5.3:45493837-45493856 | None:intergenic | 30.0% | |
| AGAACCGAGTAAAAGAAAAT+TGG | + | chr5.3:45494028-45494047 | MS.gene96656:CDS | 30.0% | |
| AGCCTATAAAGAATAACACA+AGG | - | chr5.3:45494460-45494479 | None:intergenic | 30.0% | |
| AGGATGTTAAGTTCTTTGAT+TGG | - | chr5.3:45491536-45491555 | None:intergenic | 30.0% | |
| AGTTCAACTTTCCTATAGAT+TGG | - | chr5.3:45493375-45493394 | None:intergenic | 30.0% | |
| ATAATGAAGTTGTTGAGCAT+TGG | - | chr5.3:45493134-45493153 | None:intergenic | 30.0% | |
| ATATTTAGTGCAACACGTAA+AGG | - | chr5.3:45494284-45494303 | None:intergenic | 30.0% | |
| CTCAAAAGTCATACTGTTAT+TGG | + | chr5.3:45493268-45493287 | MS.gene96656:intron | 30.0% | |
| CTGATACGTCACAATTTAAA+GGG | - | chr5.3:45493836-45493855 | None:intergenic | 30.0% | |
| GAAATCATATGCAAGAGAAA+TGG | - | chr5.3:45494084-45494103 | None:intergenic | 30.0% | |
| GGTCATAATATGCATTTCTA+AGG | + | chr5.3:45493724-45493743 | MS.gene96656:intron | 30.0% | |
| GTCATAATTTGAATGCTAAG+TGG | + | chr5.3:45493348-45493367 | MS.gene96656:intron | 30.0% | |
| GTCATGCTTTCTATGAAATA+AGG | - | chr5.3:45493481-45493500 | None:intergenic | 30.0% | |
| GTCTTTGGATGTTTGTTTAT+AGG | + | chr5.3:45492444-45492463 | MS.gene96656:intron | 30.0% | |
| GTGATTCATTGTGTGAAAAT+TGG | + | chr5.3:45492474-45492493 | MS.gene96656:intron | 30.0% | |
| GTTCAACTTTCCTATAGATT+GGG | - | chr5.3:45493374-45493393 | None:intergenic | 30.0% | |
| TCTATGTTATCAGACAACAT+AGG | + | chr5.3:45492363-45492382 | MS.gene96656:intron | 30.0% | |
| TGAAGTTTCTTAAAAGTTGG+GGG | + | chr5.3:45492512-45492531 | MS.gene96656:intron | 30.0% | |
| TTCAAAGGGTTGTTGTAAAT+GGG | - | chr5.3:45491573-45491592 | None:intergenic | 30.0% | |
| TTGTTAAGTAGTGGTATGAA+AGG | + | chr5.3:45492212-45492231 | MS.gene96656:intron | 30.0% | |
| ! | AAGGGTAATTGATTCTTCAA+AGG | - | chr5.3:45491588-45491607 | None:intergenic | 30.0% |
| ! | AGGGTAATTGATTCTTCAAA+GGG | - | chr5.3:45491587-45491606 | None:intergenic | 30.0% |
| ! | TACAGAAATTTGCTCACTAA+TGG | - | chr5.3:45494917-45494936 | None:intergenic | 30.0% |
| !! | GTGTATTTTTGTCATGGATA+TGG | + | chr5.3:45492304-45492323 | MS.gene96656:CDS | 30.0% |
| !! | TTCTTTGATCTGTTTTTCCT+AGG | + | chr5.3:45492029-45492048 | MS.gene96656:intron | 30.0% |
| !!! | ACTGTTAGTTTTGTTGTCTT+TGG | - | chr5.3:45491633-45491652 | None:intergenic | 30.0% |
| AAATACACAGATGCCTTGAT+TGG | - | chr5.3:45492292-45492311 | None:intergenic | 35.0% | |
| AACCAAAATGTTGCAATGCA+AGG | - | chr5.3:45494390-45494409 | None:intergenic | 35.0% | |
| AAGTTTCTTAAAAGTTGGGG+GGG | + | chr5.3:45492514-45492533 | MS.gene96656:intron | 35.0% | |
| ACAGCTTGAATTCTATCATC+AGG | - | chr5.3:45495013-45495032 | None:intergenic | 35.0% | |
| ACATGCACATTCTTCTTTGA+AGG | + | chr5.3:45492331-45492350 | MS.gene96656:CDS | 35.0% | |
| AGAATGCTTTAGTGATGATC+TGG | + | chr5.3:45493621-45493640 | MS.gene96656:intron | 35.0% | |
| ATTTGAAGGAGCCAGATAAT+TGG | + | chr5.3:45493047-45493066 | MS.gene96656:CDS | 35.0% | |
| CGAAGACCTTACATATTACA+AGG | - | chr5.3:45493549-45493568 | None:intergenic | 35.0% | |
| CGACGAAAGTTACAATTTCA+GGG | + | chr5.3:45492541-45492560 | MS.gene96656:intron | 35.0% | |
| CTTCAAAGGGTTGTTGTAAA+TGG | - | chr5.3:45491574-45491593 | None:intergenic | 35.0% | |
| GAAGTTTCTTAAAAGTTGGG+GGG | + | chr5.3:45492513-45492532 | MS.gene96656:intron | 35.0% | |
| GACGAAAGTTACAATTTCAG+GGG | + | chr5.3:45492542-45492561 | MS.gene96656:intron | 35.0% | |
| GATAATCCACGACTTAAAAC+AGG | + | chr5.3:45494504-45494523 | MS.gene96656:CDS | 35.0% | |
| GATCCCTTTACATGAAGTTT+GGG | + | chr5.3:45493575-45493594 | MS.gene96656:intron | 35.0% | |
| GCTCCATGAAGAATCAATAA+TGG | - | chr5.3:45494875-45494894 | None:intergenic | 35.0% | |
| GCTTGATCATTGCTTGTTTA+AGG | + | chr5.3:45491779-45491798 | MS.gene96656:CDS | 35.0% | |
| GTATGAAAATGCATCTAGCA+AGG | + | chr5.3:45494934-45494953 | MS.gene96656:CDS | 35.0% | |
| TATGACAAAGTCCTTAACAG+AGG | - | chr5.3:45493334-45493353 | None:intergenic | 35.0% | |
| TCAACAGACACACCTATAAT+CGG | + | chr5.3:45492880-45492899 | MS.gene96656:intron | 35.0% | |
| TCGACGAAAGTTACAATTTC+AGG | + | chr5.3:45492540-45492559 | MS.gene96656:intron | 35.0% | |
| TGACGTATCAGTTTAACAGT+TGG | + | chr5.3:45493845-45493864 | MS.gene96656:intron | 35.0% | |
| TTCATGATGACATTGTCTCA+TGG | + | chr5.3:45495032-45495051 | MS.gene96656:CDS | 35.0% | |
| TTGTTGTAAATGGGAGAGAA+AGG | - | chr5.3:45491564-45491583 | None:intergenic | 35.0% | |
| TTTGAAGGAGCCAGATAATT+GGG | + | chr5.3:45493048-45493067 | MS.gene96656:CDS | 35.0% | |
| ! | AAACAGGCATGGAACTTTTA+AGG | + | chr5.3:45494520-45494539 | MS.gene96656:CDS | 35.0% |
| ! | AAATGGTTACCACTGCATTT+TGG | + | chr5.3:45494979-45494998 | MS.gene96656:CDS | 35.0% |
| ! | AACAGGCATGGAACTTTTAA+GGG | + | chr5.3:45494521-45494540 | MS.gene96656:CDS | 35.0% |
| ! | AGATGTTAACATTTTGGACC+CGG | + | chr5.3:45493687-45493706 | MS.gene96656:intron | 35.0% |
| ! | CATTGGTAACAATACAAACG+AGG | - | chr5.3:45493117-45493136 | None:intergenic | 35.0% |
| ! | TCGTCGAGATGTTAACATTT+TGG | + | chr5.3:45493681-45493700 | MS.gene96656:intron | 35.0% |
| ! | TGGCGACAATGTTGATATTT+TGG | - | chr5.3:45494225-45494244 | None:intergenic | 35.0% |
| ! | TTGAATTTGCTCTCCAGATA+TGG | + | chr5.3:45494187-45494206 | MS.gene96656:intron | 35.0% |
| ! | TTTTCATCTTGACCAATGTC+AGG | + | chr5.3:45491818-45491837 | MS.gene96656:intron | 35.0% |
| !! | AAGAGAAAAGCACCAATTGA+AGG | + | chr5.3:45491660-45491679 | MS.gene96656:CDS | 35.0% |
| !! | GCACCATTATTGATTCTTCA+TGG | + | chr5.3:45494869-45494888 | MS.gene96656:CDS | 35.0% |
| !! | GCATCTGTGTATTTTTGTCA+TGG | + | chr5.3:45492298-45492317 | MS.gene96656:CDS | 35.0% |
| !! | TTCTAAGGCAGATCATGTTA+AGG | + | chr5.3:45493739-45493758 | MS.gene96656:intron | 35.0% |
| !!! | TGGAAATTTTTTGCAAGAGC+TGG | + | chr5.3:45492248-45492267 | MS.gene96656:CDS | 35.0% |
| !!! | TTTTTTATTCAGGTGTTGCG+AGG | + | chr5.3:45492587-45492606 | MS.gene96656:intron | 35.0% |
| AAACAAAGACCTTGCTGAAC+TGG | + | chr5.3:45493998-45494017 | MS.gene96656:CDS | 40.0% | |
| ACATCATCTGCAATCTTACC+AGG | - | chr5.3:45493906-45493925 | None:intergenic | 40.0% | |
| AGAATTACCTCGAGTTCTGT+TGG | + | chr5.3:45492988-45493007 | MS.gene96656:CDS | 40.0% | |
| AGCATGACAGAGAAAGAAAG+AGG | + | chr5.3:45493493-45493512 | MS.gene96656:intron | 40.0% | |
| AGTGGTATGAAAGGAATTCG+AGG | + | chr5.3:45492221-45492240 | MS.gene96656:intron | 40.0% | |
| AGTTCAGCAAGGTCTTTGTT+TGG | - | chr5.3:45493999-45494018 | None:intergenic | 40.0% | |
| ATCACAGCATCCCAATTATC+TGG | - | chr5.3:45493061-45493080 | None:intergenic | 40.0% | |
| ATCATGTGAGATGTGATACG+TGG | + | chr5.3:45493402-45493421 | MS.gene96656:intron | 40.0% | |
| ATGCTGAAACCTATGAAGCA+CGG | - | chr5.3:45494782-45494801 | None:intergenic | 40.0% | |
| ATGGCTTGATTCTAGGTGTT+CGG | + | chr5.3:45495051-45495070 | MS.gene96656:CDS | 40.0% | |
| ATGGTTGATTGGGTTATGTC+AGG | + | chr5.3:45494841-45494860 | MS.gene96656:intron | 40.0% | |
| ATTCTTCCCATTTCCTCTTC+TGG | - | chr5.3:45493606-45493625 | None:intergenic | 40.0% | |
| CATTGTGTGAAAATTGGGTG+TGG | + | chr5.3:45492480-45492499 | MS.gene96656:intron | 40.0% | |
| CGAGGTAATTCTCTCATATC+AGG | - | chr5.3:45492980-45492999 | None:intergenic | 40.0% | |
| CGATCCCTTTACATGAAGTT+TGG | + | chr5.3:45493574-45493593 | MS.gene96656:intron | 40.0% | |
| CGTATCAGTTTAACAGTTGG+AGG | + | chr5.3:45493848-45493867 | MS.gene96656:intron | 40.0% | |
| CGTCGACACCGATAATAATT+TGG | - | chr5.3:45491905-45491924 | None:intergenic | 40.0% | |
| CTGGATAGGTTTCAAAGACA+TGG | + | chr5.3:45492914-45492933 | MS.gene96656:intron | 40.0% | |
| GAATTACCTCGAGTTCTGTT+GGG | + | chr5.3:45492989-45493008 | MS.gene96656:CDS | 40.0% | |
| GGAGTATGTGTTTCATAGGT+TGG | + | chr5.3:45491932-45491951 | MS.gene96656:intron | 40.0% | |
| GTGGTATGAAAGGAATTCGA+GGG | + | chr5.3:45492222-45492241 | MS.gene96656:intron | 40.0% | |
| TATGAAGCACAGACATTCCT+CGG | + | chr5.3:45494643-45494662 | MS.gene96656:intron | 40.0% | |
| TCATGTGAGATGTGATACGT+GGG | + | chr5.3:45493403-45493422 | MS.gene96656:intron | 40.0% | |
| TCCTTGAACCTTGTAACCTA+GGG | + | chr5.3:45493430-45493449 | MS.gene96656:intron | 40.0% | |
| TCGACAAGATCATCGAAGTT+TGG | - | chr5.3:45492694-45492713 | None:intergenic | 40.0% | |
| TCTTCACTCACACCTTCAAT+TGG | - | chr5.3:45491675-45491694 | None:intergenic | 40.0% | |
| TGACCGGTCAATATTGAATC+CGG | - | chr5.3:45493709-45493728 | None:intergenic | 40.0% | |
| TGGTATGAAAGGAATTCGAG+GGG | + | chr5.3:45492223-45492242 | MS.gene96656:CDS | 40.0% | |
| TTCCTTGAACCTTGTAACCT+AGG | + | chr5.3:45493429-45493448 | MS.gene96656:intron | 40.0% | |
| TTCTTCCCATTTCCTCTTCT+GGG | - | chr5.3:45493605-45493624 | None:intergenic | 40.0% | |
| TTGTCTCATGGCTTGATTCT+AGG | + | chr5.3:45495044-45495063 | MS.gene96656:CDS | 40.0% | |
| ! | AATGGGAGAGAAAGGTATGA+AGG | - | chr5.3:45491556-45491575 | None:intergenic | 40.0% |
| ! | ACATGTCTAAAGCCTGACAT+TGG | - | chr5.3:45491833-45491852 | None:intergenic | 40.0% |
| ! | CAGTTTCAAGTGTAGTGTCA+GGG | - | chr5.3:45492800-45492819 | None:intergenic | 40.0% |
| ! | CTGAGGAGTATGTGTTTCAT+AGG | + | chr5.3:45491928-45491947 | MS.gene96656:intron | 40.0% |
| ! | GTTCAGCAAGGTCTTTGTTT+GGG | - | chr5.3:45493998-45494017 | None:intergenic | 40.0% |
| ! | GTTTTCCCAGAAGAGGAAAT+GGG | + | chr5.3:45493597-45493616 | MS.gene96656:intron | 40.0% |
| ! | TCAGTTTCAAGTGTAGTGTC+AGG | - | chr5.3:45492801-45492820 | None:intergenic | 40.0% |
| ! | TGCCTTGCATTGCAACATTT+TGG | + | chr5.3:45494385-45494404 | MS.gene96656:intron | 40.0% |
| ! | TTTGGGAAGAGCTTTGCTTT+TGG | - | chr5.3:45493981-45494000 | None:intergenic | 40.0% |
| !! | GTTACCACTGCATTTTGGAA+GGG | + | chr5.3:45494984-45495003 | MS.gene96656:CDS | 40.0% |
| !! | GTTTTTGCTATGGACTATCC+AGG | + | chr5.3:45492634-45492653 | MS.gene96656:CDS | 40.0% |
| !! | TTACCACTGCATTTTGGAAG+GGG | + | chr5.3:45494985-45495004 | MS.gene96656:CDS | 40.0% |
| !!! | TGGGTATGCTGTTTTTGCTA+TGG | + | chr5.3:45492624-45492643 | MS.gene96656:CDS | 40.0% |
| AACGCCTTCATTACTGCATC+AGG | - | chr5.3:45493936-45493955 | None:intergenic | 45.0% | |
| ACAAGTTTCAGTAGCTCCCT+AGG | - | chr5.3:45493449-45493468 | None:intergenic | 45.0% | |
| ACAGACACACCTATAATCGG+AGG | + | chr5.3:45492883-45492902 | MS.gene96656:intron | 45.0% | |
| ACCACCTGATGCAGTAATGA+AGG | + | chr5.3:45493929-45493948 | MS.gene96656:CDS | 45.0% | |
| AGAGTCAGGAACTCCAATCA+AGG | + | chr5.3:45492276-45492295 | MS.gene96656:CDS | 45.0% | |
| AGTTCTGTTGGGACAGTCAA+TGG | + | chr5.3:45493000-45493019 | MS.gene96656:CDS | 45.0% | |
| CATGTGAGATGTGATACGTG+GGG | + | chr5.3:45493404-45493423 | MS.gene96656:intron | 45.0% | |
| GAAGTCTCCACAACCATATC+TGG | - | chr5.3:45494203-45494222 | None:intergenic | 45.0% | |
| GACCCGGATTCAATATTGAC+CGG | + | chr5.3:45493703-45493722 | MS.gene96656:intron | 45.0% | |
| GACCGGTCAATATTGAATCC+GGG | - | chr5.3:45493708-45493727 | None:intergenic | 45.0% | |
| GAGGAATGTCTGTGCTTCAT+AGG | - | chr5.3:45494644-45494663 | None:intergenic | 45.0% | |
| GGACTTTCAGAAGGATTGCA+TGG | + | chr5.3:45492661-45492680 | MS.gene96656:CDS | 45.0% | |
| GTTCTGTTGGGACAGTCAAT+GGG | + | chr5.3:45493001-45493020 | MS.gene96656:CDS | 45.0% | |
| GTTTAAGCTGCGTGACTAGT+AGG | - | chr5.3:45494355-45494374 | None:intergenic | 45.0% | |
| TCCACGACTTAAAACAGGCA+TGG | + | chr5.3:45494509-45494528 | MS.gene96656:CDS | 45.0% | |
| TCCCTAGGTTACAAGGTTCA+AGG | - | chr5.3:45493434-45493453 | None:intergenic | 45.0% | |
| TGAAAGGAATTCGAGGGGAT+TGG | + | chr5.3:45492228-45492247 | MS.gene96656:CDS | 45.0% | |
| TGCTAAGTGGCCCAATCTAT+AGG | + | chr5.3:45493361-45493380 | MS.gene96656:intron | 45.0% | |
| TGTCTGTATCCGTGCTTCAT+AGG | + | chr5.3:45494770-45494789 | MS.gene96656:intron | 45.0% | |
| TTGATTGGAGTTCCTGACTC+TGG | - | chr5.3:45492277-45492296 | None:intergenic | 45.0% | |
| TTGCTCTCCAGATATGGTTG+TGG | + | chr5.3:45494193-45494212 | MS.gene96656:intron | 45.0% | |
| ! | ACACCTATAATCGGAGGTGT+CGG | + | chr5.3:45492889-45492908 | MS.gene96656:intron | 45.0% |
| ! | CCTTCTGAAAGTCCAAAACC+TGG | - | chr5.3:45492655-45492674 | None:intergenic | 45.0% |
| ! | GGTTACCACTGCATTTTGGA+AGG | + | chr5.3:45494983-45495002 | MS.gene96656:CDS | 45.0% |
| ! | GGTTTTCCCAGAAGAGGAAA+TGG | + | chr5.3:45493596-45493615 | MS.gene96656:intron | 45.0% |
| ! | TGTCTGTTGACTGACACACA+TGG | - | chr5.3:45492870-45492889 | None:intergenic | 45.0% |
| !! | AGTTTGGGTTTTCCCAGAAG+AGG | + | chr5.3:45493590-45493609 | MS.gene96656:intron | 45.0% |
| !! | GACTTGCTGATTTGTGTTCC+TGG | + | chr5.3:45493885-45493904 | MS.gene96656:intron | 45.0% |
| !! | GCTATGGACTATCCAGGTTT+TGG | + | chr5.3:45492640-45492659 | MS.gene96656:CDS | 45.0% |
| !! | TCCATGCCTGTTTTAAGTCG+TGG | - | chr5.3:45494513-45494532 | None:intergenic | 45.0% |
| !!! | CCAGGTTTTGGACTTTCAGA+AGG | + | chr5.3:45492652-45492671 | MS.gene96656:CDS | 45.0% |
| ACGGATACAGACACGTACAC+CGG | - | chr5.3:45494763-45494782 | None:intergenic | 50.0% | |
| CAGTAGCTCCCTAGGTTACA+AGG | - | chr5.3:45493441-45493460 | None:intergenic | 50.0% | |
| CGAGGAGAATTGCTGCATCT+GGG | + | chr5.3:45492605-45492624 | MS.gene96656:CDS | 50.0% | |
| GCACAGACATTCCTCGGATT+AGG | + | chr5.3:45494649-45494668 | MS.gene96656:intron | 50.0% | |
| GCCTTCATTACTGCATCAGG+TGG | - | chr5.3:45493933-45493952 | None:intergenic | 50.0% | |
| GTTCCCCTTCCAAAATGCAG+TGG | - | chr5.3:45494991-45495010 | None:intergenic | 50.0% | |
| TCTTCATGGAGCAGCAGACA+AGG | + | chr5.3:45494883-45494902 | MS.gene96656:CDS | 50.0% | |
| TCTTCTGCTCTGATTCCAGC+AGG | - | chr5.3:45492060-45492079 | None:intergenic | 50.0% | |
| TGTTGGGACAGTCAATGGGT+GGG | + | chr5.3:45493005-45493024 | MS.gene96656:CDS | 50.0% | |
| ! | CTCTGAAAGCCAGTTCAGCA+AGG | - | chr5.3:45494010-45494029 | None:intergenic | 50.0% |
| ! | TTTTCCTAGGATGCTCCTGC+TGG | + | chr5.3:45492042-45492061 | MS.gene96656:intron | 50.0% |
| AAGAGCTGGATGCCAGAGTC+AGG | + | chr5.3:45492262-45492281 | MS.gene96656:CDS | 55.0% | |
| CTGTTGGGACAGTCAATGGG+TGG | + | chr5.3:45493004-45493023 | MS.gene96656:CDS | 55.0% | |
| GACTGTCCCAACAGAACTCG+AGG | - | chr5.3:45492998-45493017 | None:intergenic | 55.0% | |
| GCGAGGAGAATTGCTGCATC+TGG | + | chr5.3:45492604-45492623 | MS.gene96656:CDS | 55.0% | |
| GTTGGGACAGTCAATGGGTG+GGG | + | chr5.3:45493006-45493025 | MS.gene96656:CDS | 55.0% | |
| TGTCGAAACGTGTCCGACAG+CGG | - | chr5.3:45494681-45494700 | None:intergenic | 55.0% | |
| ! | GCACCGACACCTCCGATTAT+AGG | - | chr5.3:45492895-45492914 | None:intergenic | 55.0% |
| !! | ATAATCGGAGGTGTCGGTGC+TGG | + | chr5.3:45492895-45492914 | MS.gene96656:intron | 55.0% |
| !! | GATTCCAGCAGGAGCATCCT+AGG | - | chr5.3:45492049-45492068 | None:intergenic | 55.0% |
| !! | TATCGGTGTCGACGTGTCTG+AGG | + | chr5.3:45491911-45491930 | MS.gene96656:intron | 55.0% |
| GATTAGGCGTGTCCCGCTGT+CGG | + | chr5.3:45494665-45494684 | MS.gene96656:intron | 60.0% | |
| GTCGAAACGTGTCCGACAGC+GGG | - | chr5.3:45494680-45494699 | None:intergenic | 60.0% | |
| AGCGGGACACGCCTAATCCG+AGG | - | chr5.3:45494663-45494682 | None:intergenic | 65.0% | |
| ! | CGGTGTCAGCGTGTCGTGTC+CGG | + | chr5.3:45494741-45494760 | MS.gene96656:intron | 65.0% |
| !! | CGGAGGTGTCGGTGCTGGAT+AGG | + | chr5.3:45492900-45492919 | MS.gene96656:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 45491507 | 45495081 | 45491507 | ID=MS.gene96656 |
| chr5.3 | mRNA | 45491507 | 45495081 | 45491507 | ID=MS.gene96656.t1;Parent=MS.gene96656 |
| chr5.3 | exon | 45491507 | 45491800 | 45491507 | ID=MS.gene96656.t1.exon1;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45491507 | 45491800 | 45491507 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45492051 | 45492080 | 45492051 | ID=MS.gene96656.t1.exon2;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45492051 | 45492080 | 45492051 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45492223 | 45492352 | 45492223 | ID=MS.gene96656.t1.exon3;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45492223 | 45492352 | 45492223 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45492599 | 45492745 | 45492599 | ID=MS.gene96656.t1.exon4;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45492599 | 45492745 | 45492599 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45492972 | 45493102 | 45492972 | ID=MS.gene96656.t1.exon5;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45492972 | 45493102 | 45492972 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45493912 | 45494049 | 45493912 | ID=MS.gene96656.t1.exon6;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45493912 | 45494049 | 45493912 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45494477 | 45494575 | 45494477 | ID=MS.gene96656.t1.exon7;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45494477 | 45494575 | 45494477 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| chr5.3 | exon | 45494863 | 45495081 | 45494863 | ID=MS.gene96656.t1.exon8;Parent=MS.gene96656.t1 |
| chr5.3 | CDS | 45494863 | 45495081 | 45494863 | ID=cds.MS.gene96656.t1;Parent=MS.gene96656.t1 |
| Gene Sequence |
| Protein sequence |
