Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73074.t1 | XP_003598782.1 | 45.5 | 558 | 7 | 2 | 1 | 261 | 1 | 558 | 2.70E-102 | 381.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73074.t1 | Q9LRR4 | 24.9 | 342 | 99 | 6 | 4 | 187 | 2 | 343 | 2.1e-15 | 84.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73074.t1 | G7IW90 | 45.5 | 558 | 7 | 2 | 1 | 261 | 1 | 558 | 1.9e-102 | 381.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052239 | MS.gene73074 | -0.803298 | 3.73E-49 | -1.69E-46 |
| MS.gene052447 | MS.gene73074 | 0.818917 | 1.53E-52 | -1.69E-46 |
| MS.gene05329 | MS.gene73074 | 0.817259 | 3.62E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene73074 | 0.816058 | 6.73E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene73074 | 0.805762 | 1.14E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene73074 | 0.812865 | 3.42E-51 | -1.69E-46 |
| MS.gene059584 | MS.gene73074 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene060134 | MS.gene73074 | 0.831843 | 1.33E-55 | -1.69E-46 |
| MS.gene060135 | MS.gene73074 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene060918 | MS.gene73074 | 0.804869 | 1.76E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73074.t1 | MTR_3g020890 | 97.414 | 116 | 3 | 0 | 1 | 116 | 1 | 116 | 8.96e-67 | 224 |
| MS.gene73074.t1 | MTR_3g020890 | 70.588 | 119 | 34 | 1 | 119 | 237 | 262 | 379 | 2.16e-48 | 172 |
| MS.gene73074.t1 | MTR_3g020890 | 96.875 | 64 | 2 | 0 | 198 | 261 | 495 | 558 | 5.29e-34 | 130 |
| MS.gene73074.t1 | MTR_5g095910 | 56.693 | 127 | 47 | 2 | 1 | 119 | 1 | 127 | 1.96e-36 | 137 |
| MS.gene73074.t1 | MTR_5g095910 | 46.154 | 130 | 67 | 2 | 84 | 211 | 236 | 364 | 2.47e-27 | 111 |
| MS.gene73074.t1 | MTR_5g095910 | 65.079 | 63 | 22 | 0 | 198 | 260 | 503 | 565 | 2.03e-20 | 90.9 |
| MS.gene73074.t1 | MTR_2g014820 | 59.350 | 123 | 45 | 1 | 1 | 118 | 1 | 123 | 2.57e-36 | 137 |
| MS.gene73074.t1 | MTR_2g014820 | 40.132 | 152 | 88 | 2 | 81 | 230 | 230 | 380 | 2.18e-25 | 105 |
| MS.gene73074.t1 | MTR_2g014840 | 55.200 | 125 | 51 | 1 | 1 | 120 | 1 | 125 | 9.37e-36 | 135 |
| MS.gene73074.t1 | MTR_2g014840 | 39.355 | 155 | 91 | 2 | 84 | 236 | 233 | 386 | 1.45e-27 | 111 |
| MS.gene73074.t1 | MTR_2g014840 | 59.677 | 62 | 25 | 0 | 198 | 259 | 500 | 561 | 2.92e-16 | 78.6 |
| MS.gene73074.t1 | MTR_2g014830 | 50.806 | 124 | 57 | 1 | 1 | 120 | 1 | 124 | 2.32e-33 | 119 |
| MS.gene73074.t1 | MTR_2g014730 | 52.846 | 123 | 54 | 1 | 1 | 119 | 1 | 123 | 5.29e-33 | 127 |
| MS.gene73074.t1 | MTR_2g014730 | 35.669 | 157 | 82 | 4 | 82 | 236 | 226 | 365 | 6.41e-20 | 89.4 |
| MS.gene73074.t1 | MTR_2g014730 | 54.545 | 55 | 25 | 0 | 208 | 262 | 475 | 529 | 6.90e-11 | 62.8 |
| MS.gene73074.t1 | MTR_2g014720 | 62.651 | 83 | 31 | 0 | 118 | 200 | 175 | 257 | 5.72e-29 | 115 |
| MS.gene73074.t1 | MTR_2g014720 | 53.030 | 66 | 29 | 2 | 197 | 261 | 405 | 469 | 1.67e-12 | 67.4 |
| MS.gene73074.t1 | MTR_7g089080 | 61.446 | 83 | 32 | 0 | 118 | 200 | 625 | 707 | 2.24e-28 | 114 |
| MS.gene73074.t1 | MTR_7g089080 | 45.361 | 97 | 46 | 3 | 17 | 106 | 433 | 529 | 1.67e-14 | 73.6 |
| MS.gene73074.t1 | MTR_1g047800 | 44.262 | 122 | 62 | 3 | 74 | 191 | 215 | 334 | 1.85e-22 | 97.1 |
| MS.gene73074.t1 | MTR_1g047800 | 40.769 | 130 | 72 | 2 | 1 | 126 | 1 | 129 | 1.05e-20 | 91.7 |
| MS.gene73074.t1 | MTR_6g084550 | 51.546 | 97 | 47 | 0 | 1 | 97 | 1 | 97 | 2.19e-22 | 96.7 |
| MS.gene73074.t1 | MTR_3g435720 | 52.222 | 90 | 43 | 0 | 1 | 90 | 1 | 90 | 2.56e-21 | 93.6 |
| MS.gene73074.t1 | MTR_3g435720 | 33.140 | 172 | 95 | 5 | 45 | 211 | 208 | 364 | 2.12e-18 | 85.1 |
| MS.gene73074.t1 | MTR_3g035960 | 43.363 | 113 | 60 | 1 | 1 | 109 | 1 | 113 | 3.09e-21 | 93.2 |
| MS.gene73074.t1 | MTR_3g035960 | 32.867 | 143 | 87 | 3 | 74 | 211 | 226 | 364 | 1.95e-17 | 82.0 |
| MS.gene73074.t1 | MTR_3g032960 | 43.077 | 130 | 63 | 1 | 1 | 119 | 1 | 130 | 4.24e-21 | 92.8 |
| MS.gene73074.t1 | MTR_3g032960 | 32.749 | 171 | 97 | 5 | 45 | 211 | 208 | 364 | 4.08e-17 | 81.3 |
| MS.gene73074.t1 | MTR_3g032800 | 40.000 | 145 | 72 | 2 | 1 | 130 | 1 | 145 | 8.35e-21 | 92.0 |
| MS.gene73074.t1 | MTR_3g032800 | 32.558 | 172 | 96 | 5 | 45 | 211 | 208 | 364 | 1.28e-16 | 79.7 |
| MS.gene73074.t1 | MTR_0083s0110 | 50.000 | 90 | 45 | 0 | 1 | 90 | 1 | 90 | 7.17e-20 | 84.3 |
| MS.gene73074.t1 | MTR_3g033240 | 42.308 | 130 | 64 | 1 | 1 | 119 | 1 | 130 | 1.34e-19 | 88.6 |
| MS.gene73074.t1 | MTR_3g033240 | 27.027 | 222 | 139 | 6 | 45 | 261 | 208 | 411 | 3.48e-16 | 78.6 |
| MS.gene73074.t1 | MTR_8g038590 | 40.441 | 136 | 74 | 3 | 1 | 130 | 1 | 135 | 1.55e-19 | 88.2 |
| MS.gene73074.t1 | MTR_8g038590 | 46.067 | 89 | 48 | 0 | 104 | 192 | 264 | 352 | 1.54e-17 | 82.4 |
| MS.gene73074.t1 | MTR_2g060700 | 39.344 | 122 | 71 | 2 | 74 | 193 | 46 | 166 | 1.82e-19 | 87.8 |
| MS.gene73074.t1 | MTR_8g030860 | 35.762 | 151 | 79 | 3 | 74 | 211 | 226 | 371 | 2.72e-19 | 87.8 |
| MS.gene73074.t1 | MTR_8g030860 | 40.708 | 113 | 63 | 1 | 1 | 109 | 1 | 113 | 1.13e-18 | 85.9 |
| MS.gene73074.t1 | MTR_2g038760 | 38.583 | 127 | 68 | 2 | 67 | 191 | 231 | 349 | 3.12e-19 | 87.4 |
| MS.gene73074.t1 | MTR_2g038760 | 34.586 | 133 | 65 | 3 | 2 | 120 | 13 | 137 | 2.83e-11 | 63.9 |
| MS.gene73074.t1 | MTR_2g039010 | 39.370 | 127 | 67 | 3 | 67 | 191 | 200 | 318 | 4.03e-19 | 85.9 |
| MS.gene73074.t1 | MTR_3g028040 | 40.769 | 130 | 66 | 1 | 1 | 119 | 1 | 130 | 4.72e-19 | 87.0 |
| MS.gene73074.t1 | MTR_3g028040 | 35.246 | 122 | 72 | 2 | 74 | 191 | 226 | 344 | 1.78e-16 | 79.3 |
| MS.gene73074.t1 | MTR_3g019040 | 48.454 | 97 | 49 | 1 | 1 | 97 | 1 | 96 | 5.07e-19 | 86.7 |
| MS.gene73074.t1 | MTR_3g019040 | 34.646 | 127 | 81 | 1 | 121 | 247 | 275 | 399 | 4.38e-12 | 66.2 |
| MS.gene73074.t1 | MTR_8g038570 | 46.739 | 92 | 49 | 0 | 1 | 92 | 1 | 92 | 5.24e-19 | 86.7 |
| MS.gene73074.t1 | MTR_8g038570 | 35.294 | 136 | 77 | 4 | 59 | 191 | 228 | 355 | 1.18e-17 | 82.8 |
| MS.gene73074.t1 | MTR_3g032760 | 31.111 | 225 | 109 | 9 | 18 | 211 | 155 | 364 | 5.40e-19 | 86.7 |
| MS.gene73074.t1 | MTR_3g032760 | 51.111 | 90 | 44 | 0 | 1 | 90 | 1 | 90 | 5.72e-13 | 68.9 |
| MS.gene73074.t1 | MTR_3g033130 | 35.099 | 151 | 80 | 3 | 74 | 211 | 204 | 349 | 6.84e-19 | 86.7 |
| MS.gene73074.t1 | MTR_3g033130 | 35.036 | 137 | 81 | 2 | 1 | 130 | 1 | 136 | 3.78e-15 | 75.5 |
| MS.gene73074.t1 | MTR_3g014360 | 47.253 | 91 | 48 | 0 | 4 | 94 | 3 | 93 | 8.36e-19 | 86.3 |
| MS.gene73074.t1 | MTR_3g035940 | 33.566 | 143 | 86 | 3 | 74 | 211 | 226 | 364 | 8.80e-19 | 86.3 |
| MS.gene73074.t1 | MTR_3g035940 | 43.363 | 113 | 60 | 1 | 1 | 109 | 1 | 113 | 3.42e-16 | 78.6 |
| MS.gene73074.t1 | MTR_3g030960 | 48.889 | 90 | 46 | 0 | 1 | 90 | 1 | 90 | 1.13e-18 | 85.9 |
| MS.gene73074.t1 | MTR_3g030960 | 33.721 | 172 | 94 | 5 | 45 | 211 | 208 | 364 | 7.35e-18 | 83.6 |
| MS.gene73074.t1 | MTR_3g030980 | 48.889 | 90 | 46 | 0 | 1 | 90 | 1 | 90 | 1.44e-18 | 85.5 |
| MS.gene73074.t1 | MTR_3g030980 | 33.721 | 172 | 94 | 5 | 45 | 211 | 208 | 364 | 9.45e-18 | 83.2 |
| MS.gene73074.t1 | MTR_3g032340 | 31.818 | 198 | 103 | 4 | 18 | 191 | 160 | 349 | 1.78e-18 | 85.1 |
| MS.gene73074.t1 | MTR_3g032340 | 42.222 | 90 | 52 | 0 | 1 | 90 | 1 | 90 | 7.58e-16 | 77.4 |
| MS.gene73074.t1 | MTR_3g035840 | 34.043 | 141 | 88 | 3 | 74 | 211 | 226 | 364 | 2.11e-18 | 84.7 |
| MS.gene73074.t1 | MTR_3g035840 | 43.363 | 113 | 60 | 1 | 1 | 109 | 1 | 113 | 1.57e-15 | 76.3 |
| MS.gene73074.t1 | MTR_3g035480 | 34.043 | 141 | 88 | 3 | 74 | 211 | 226 | 364 | 2.30e-18 | 85.1 |
| MS.gene73074.t1 | MTR_3g035480 | 42.478 | 113 | 61 | 1 | 1 | 109 | 1 | 113 | 1.28e-14 | 73.9 |
| MS.gene73074.t1 | MTR_3g032370 | 33.846 | 195 | 103 | 8 | 18 | 191 | 153 | 342 | 3.52e-18 | 84.3 |
| MS.gene73074.t1 | MTR_3g032370 | 40.800 | 125 | 63 | 1 | 6 | 119 | 4 | 128 | 2.34e-17 | 82.0 |
| MS.gene73074.t1 | MTR_3g032150 | 33.846 | 195 | 103 | 8 | 18 | 191 | 153 | 342 | 3.53e-18 | 84.3 |
| MS.gene73074.t1 | MTR_3g032150 | 40.800 | 125 | 63 | 1 | 6 | 119 | 4 | 128 | 6.17e-17 | 80.9 |
| MS.gene73074.t1 | MTR_3g032500 | 30.808 | 198 | 105 | 5 | 18 | 191 | 159 | 348 | 4.42e-18 | 84.0 |
| MS.gene73074.t1 | MTR_3g032500 | 36.441 | 118 | 66 | 1 | 1 | 109 | 1 | 118 | 5.82e-17 | 80.9 |
| MS.gene73074.t1 | MTR_2g039040 | 33.803 | 213 | 104 | 7 | 7 | 191 | 7 | 210 | 4.91e-18 | 83.6 |
| MS.gene73074.t1 | MTR_3g033380 | 32.461 | 191 | 111 | 6 | 18 | 191 | 159 | 348 | 5.15e-18 | 84.0 |
| MS.gene73074.t1 | MTR_3g033380 | 36.441 | 118 | 66 | 1 | 1 | 109 | 1 | 118 | 4.57e-17 | 81.3 |
| MS.gene73074.t1 | MTR_4g050410 | 33.133 | 166 | 89 | 4 | 74 | 229 | 218 | 371 | 5.44e-18 | 84.0 |
| MS.gene73074.t1 | MTR_4g050410 | 45.977 | 87 | 47 | 0 | 1 | 87 | 1 | 87 | 4.65e-15 | 75.1 |
| MS.gene73074.t1 | MTR_3g033110 | 32.877 | 146 | 90 | 1 | 74 | 211 | 218 | 363 | 6.31e-18 | 83.6 |
| MS.gene73074.t1 | MTR_3g033110 | 45.556 | 90 | 49 | 0 | 1 | 90 | 1 | 90 | 9.47e-17 | 80.1 |
| MS.gene73074.t1 | MTR_2g038900 | 38.095 | 126 | 68 | 3 | 68 | 191 | 221 | 338 | 6.49e-18 | 83.6 |
| MS.gene73074.t1 | MTR_3g027250 | 39.231 | 130 | 73 | 2 | 1 | 130 | 1 | 124 | 6.66e-18 | 83.6 |
| MS.gene73074.t1 | MTR_3g027250 | 31.387 | 137 | 92 | 1 | 74 | 210 | 213 | 347 | 1.42e-14 | 73.6 |
| MS.gene73074.t1 | MTR_3g031940 | 29.798 | 198 | 107 | 3 | 18 | 191 | 159 | 348 | 1.09e-17 | 82.8 |
| MS.gene73074.t1 | MTR_3g031940 | 37.288 | 118 | 65 | 1 | 1 | 109 | 1 | 118 | 1.48e-17 | 82.4 |
| MS.gene73074.t1 | MTR_2g063777 | 38.462 | 130 | 69 | 1 | 1 | 119 | 1 | 130 | 1.21e-17 | 82.8 |
| MS.gene73074.t1 | MTR_2g063777 | 33.557 | 149 | 85 | 5 | 45 | 191 | 208 | 344 | 2.57e-17 | 82.0 |
| MS.gene73074.t1 | MTR_0002s0090 | 32.867 | 143 | 87 | 3 | 74 | 211 | 226 | 364 | 1.63e-17 | 82.4 |
| MS.gene73074.t1 | MTR_0002s0090 | 45.217 | 115 | 52 | 2 | 1 | 104 | 1 | 115 | 8.50e-16 | 77.4 |
| MS.gene73074.t1 | MTR_3g035500 | 32.867 | 143 | 87 | 3 | 74 | 211 | 226 | 364 | 1.63e-17 | 82.4 |
| MS.gene73074.t1 | MTR_3g035500 | 45.217 | 115 | 52 | 2 | 1 | 104 | 1 | 115 | 8.50e-16 | 77.4 |
| MS.gene73074.t1 | MTR_3g032110 | 46.667 | 90 | 48 | 0 | 1 | 90 | 1 | 90 | 1.84e-17 | 82.4 |
| MS.gene73074.t1 | MTR_3g032110 | 40.206 | 97 | 50 | 2 | 119 | 211 | 273 | 365 | 2.20e-17 | 82.0 |
| MS.gene73074.t1 | MTR_0002s0110 | 32.867 | 143 | 87 | 3 | 74 | 211 | 226 | 364 | 1.95e-17 | 82.0 |
| MS.gene73074.t1 | MTR_0002s0110 | 42.478 | 113 | 61 | 1 | 1 | 109 | 1 | 113 | 4.14e-15 | 75.5 |
| MS.gene73074.t1 | MTR_3g032200 | 35.294 | 119 | 76 | 1 | 74 | 191 | 230 | 348 | 2.72e-17 | 81.6 |
| MS.gene73074.t1 | MTR_3g032200 | 36.441 | 118 | 66 | 1 | 1 | 109 | 1 | 118 | 4.69e-17 | 81.3 |
| MS.gene73074.t1 | MTR_3g435740 | 46.667 | 90 | 48 | 0 | 1 | 90 | 46 | 135 | 3.70e-17 | 81.3 |
| MS.gene73074.t1 | MTR_3g435740 | 37.634 | 93 | 58 | 0 | 119 | 211 | 316 | 408 | 2.20e-16 | 79.0 |
| MS.gene73074.t1 | MTR_1g037730 | 39.200 | 125 | 71 | 4 | 74 | 195 | 230 | 352 | 4.16e-17 | 80.5 |
| MS.gene73074.t1 | MTR_1g037730 | 44.681 | 94 | 52 | 0 | 1 | 94 | 1 | 94 | 8.56e-13 | 67.8 |
| MS.gene73074.t1 | MTR_3g014040 | 39.200 | 125 | 71 | 4 | 74 | 195 | 230 | 352 | 5.22e-17 | 80.9 |
| MS.gene73074.t1 | MTR_3g014040 | 44.681 | 94 | 52 | 0 | 1 | 94 | 1 | 94 | 2.30e-13 | 70.1 |
| MS.gene73074.t1 | MTR_7g021000 | 37.692 | 130 | 75 | 2 | 1 | 130 | 1 | 124 | 5.98e-17 | 80.9 |
| MS.gene73074.t1 | MTR_3g033080 | 33.333 | 150 | 83 | 3 | 74 | 211 | 219 | 363 | 8.03e-17 | 80.5 |
| MS.gene73074.t1 | MTR_3g033080 | 37.956 | 137 | 77 | 2 | 1 | 130 | 1 | 136 | 1.62e-16 | 79.3 |
| MS.gene73074.t1 | MTR_3g014510 | 36.842 | 133 | 69 | 2 | 4 | 121 | 3 | 135 | 9.83e-17 | 80.1 |
| MS.gene73074.t1 | MTR_3g014510 | 34.641 | 153 | 85 | 6 | 45 | 194 | 209 | 349 | 5.03e-16 | 78.2 |
| MS.gene73074.t1 | MTR_3g018980 | 36.567 | 134 | 74 | 2 | 1 | 124 | 1 | 133 | 1.09e-16 | 80.1 |
| MS.gene73074.t1 | MTR_3g018980 | 32.800 | 125 | 82 | 1 | 121 | 245 | 275 | 397 | 2.91e-12 | 67.0 |
| MS.gene73074.t1 | MTR_3g023030 | 36.134 | 119 | 75 | 1 | 74 | 191 | 230 | 348 | 1.20e-16 | 79.7 |
| MS.gene73074.t1 | MTR_3g023030 | 40.404 | 99 | 55 | 3 | 1 | 97 | 1 | 97 | 3.07e-12 | 66.6 |
| MS.gene73074.t1 | MTR_3g023030 | 36.134 | 119 | 75 | 1 | 74 | 191 | 230 | 348 | 1.34e-16 | 79.7 |
| MS.gene73074.t1 | MTR_3g023030 | 40.404 | 99 | 55 | 3 | 1 | 97 | 1 | 97 | 3.23e-12 | 66.6 |
| MS.gene73074.t1 | MTR_3g027200 | 36.134 | 119 | 75 | 1 | 74 | 191 | 228 | 346 | 1.58e-16 | 79.3 |
| MS.gene73074.t1 | MTR_3g027200 | 40.000 | 95 | 55 | 2 | 1 | 95 | 1 | 93 | 1.24e-12 | 67.8 |
| MS.gene73074.t1 | MTR_3g018980 | 36.567 | 134 | 74 | 2 | 1 | 124 | 1 | 133 | 1.87e-16 | 79.3 |
| MS.gene73074.t1 | MTR_3g018980 | 32.800 | 125 | 82 | 1 | 121 | 245 | 275 | 397 | 4.22e-12 | 66.2 |
| MS.gene73074.t1 | MTR_3g018930 | 34.559 | 136 | 79 | 1 | 5 | 130 | 6 | 141 | 2.08e-16 | 79.3 |
| MS.gene73074.t1 | MTR_3g018930 | 29.070 | 172 | 120 | 1 | 74 | 245 | 230 | 399 | 3.83e-15 | 75.5 |
| MS.gene73074.t1 | MTR_2g038930 | 50.704 | 71 | 35 | 0 | 121 | 191 | 105 | 175 | 2.25e-16 | 79.0 |
| MS.gene73074.t1 | MTR_3g014390 | 45.055 | 91 | 50 | 0 | 4 | 94 | 3 | 93 | 2.38e-16 | 79.0 |
| MS.gene73074.t1 | MTR_3g014390 | 32.414 | 145 | 85 | 4 | 50 | 191 | 210 | 344 | 3.38e-15 | 75.5 |
| MS.gene73074.t1 | MTR_3g033860 | 34.426 | 122 | 73 | 2 | 74 | 191 | 226 | 344 | 2.84e-16 | 79.0 |
| MS.gene73074.t1 | MTR_3g033860 | 48.936 | 94 | 48 | 0 | 1 | 94 | 1 | 94 | 3.60e-15 | 75.5 |
| MS.gene73074.t1 | MTR_3g014470 | 45.055 | 91 | 50 | 0 | 4 | 94 | 3 | 93 | 3.20e-16 | 78.6 |
| MS.gene73074.t1 | MTR_7g021000 | 37.692 | 130 | 75 | 2 | 1 | 130 | 1 | 124 | 3.40e-16 | 78.6 |
| MS.gene73074.t1 | MTR_0267s0070 | 43.443 | 122 | 66 | 2 | 4 | 123 | 3 | 123 | 3.41e-16 | 78.6 |
| MS.gene73074.t1 | MTR_0267s0070 | 30.348 | 201 | 117 | 8 | 45 | 230 | 198 | 390 | 6.27e-15 | 74.7 |
| MS.gene73074.t1 | MTR_3g034380 | 35.246 | 122 | 72 | 2 | 74 | 191 | 226 | 344 | 5.53e-16 | 77.8 |
| MS.gene73074.t1 | MTR_3g034380 | 46.809 | 94 | 50 | 0 | 1 | 94 | 1 | 94 | 1.18e-14 | 73.9 |
| MS.gene73074.t1 | MTR_0003s0170 | 44.444 | 90 | 50 | 0 | 8 | 97 | 6 | 95 | 5.93e-16 | 75.9 |
| MS.gene73074.t1 | MTR_3g027470 | 35.294 | 119 | 76 | 1 | 74 | 191 | 137 | 255 | 6.70e-16 | 77.8 |
| MS.gene73074.t1 | MTR_3g034460 | 37.391 | 115 | 64 | 3 | 77 | 191 | 222 | 328 | 7.16e-16 | 77.4 |
| MS.gene73074.t1 | MTR_3g034430 | 35.246 | 122 | 72 | 2 | 74 | 191 | 226 | 344 | 9.47e-16 | 77.4 |
| MS.gene73074.t1 | MTR_3g034430 | 46.809 | 94 | 50 | 0 | 1 | 94 | 1 | 94 | 1.61e-14 | 73.6 |
| MS.gene73074.t1 | MTR_3g022790 | 36.154 | 130 | 71 | 3 | 1 | 124 | 1 | 124 | 9.92e-16 | 77.0 |
| MS.gene73074.t1 | MTR_3g022790 | 33.058 | 121 | 79 | 1 | 91 | 211 | 236 | 354 | 4.33e-14 | 72.4 |
| MS.gene73074.t1 | MTR_0005s0200 | 34.821 | 112 | 67 | 3 | 86 | 191 | 250 | 361 | 1.45e-15 | 76.6 |
| MS.gene73074.t1 | MTR_0005s0200 | 41.748 | 103 | 60 | 0 | 9 | 111 | 27 | 129 | 5.54e-14 | 72.0 |
| MS.gene73074.t1 | MTR_3g018930 | 34.559 | 136 | 79 | 1 | 5 | 130 | 6 | 141 | 1.59e-15 | 76.3 |
| MS.gene73074.t1 | MTR_3g018930 | 29.070 | 172 | 120 | 1 | 74 | 245 | 230 | 399 | 4.66e-15 | 75.1 |
| MS.gene73074.t1 | MTR_8g036195 | 37.762 | 143 | 79 | 4 | 74 | 211 | 211 | 348 | 1.68e-15 | 76.6 |
| MS.gene73074.t1 | MTR_1g037610 | 30.412 | 194 | 117 | 8 | 45 | 234 | 208 | 387 | 2.19e-15 | 76.3 |
| MS.gene73074.t1 | MTR_1g037610 | 43.590 | 78 | 44 | 0 | 20 | 97 | 19 | 96 | 3.11e-13 | 69.7 |
| MS.gene73074.t1 | MTR_3g015260 | 35.465 | 172 | 92 | 4 | 1 | 154 | 3 | 173 | 2.90e-15 | 75.9 |
| MS.gene73074.t1 | MTR_3g015260 | 32.500 | 120 | 79 | 1 | 74 | 191 | 228 | 347 | 1.13e-13 | 70.9 |
| MS.gene73074.t1 | MTR_3g014080 | 36.486 | 148 | 74 | 6 | 74 | 211 | 225 | 362 | 3.04e-15 | 75.9 |
| MS.gene73074.t1 | MTR_3g014080 | 44.944 | 89 | 49 | 0 | 6 | 94 | 4 | 92 | 2.31e-13 | 70.1 |
| MS.gene73074.t1 | MTR_3g014080 | 36.486 | 148 | 74 | 6 | 74 | 211 | 225 | 362 | 3.05e-15 | 75.9 |
| MS.gene73074.t1 | MTR_3g014080 | 44.944 | 89 | 49 | 0 | 6 | 94 | 4 | 92 | 2.37e-13 | 70.1 |
| MS.gene73074.t1 | MTR_7g078790 | 32.773 | 119 | 79 | 1 | 118 | 236 | 259 | 376 | 3.32e-15 | 75.5 |
| MS.gene73074.t1 | MTR_7g078790 | 39.310 | 145 | 81 | 3 | 7 | 144 | 5 | 149 | 6.88e-15 | 74.7 |
| MS.gene73074.t1 | MTR_3g015260 | 35.465 | 172 | 92 | 4 | 1 | 154 | 3 | 173 | 3.63e-15 | 75.5 |
| MS.gene73074.t1 | MTR_3g015260 | 32.500 | 120 | 79 | 1 | 74 | 191 | 228 | 347 | 1.49e-13 | 70.5 |
| MS.gene73074.t1 | MTR_6g046130 | 40.323 | 124 | 62 | 4 | 74 | 191 | 211 | 328 | 5.18e-15 | 75.1 |
| MS.gene73074.t1 | MTR_3g027420 | 45.333 | 75 | 41 | 0 | 117 | 191 | 255 | 329 | 7.78e-15 | 74.3 |
| MS.gene73074.t1 | MTR_3g027420 | 38.889 | 108 | 60 | 2 | 1 | 108 | 1 | 102 | 1.25e-12 | 67.8 |
| MS.gene73074.t1 | MTR_3g007190 | 43.956 | 91 | 51 | 0 | 4 | 94 | 3 | 93 | 7.90e-15 | 74.3 |
| MS.gene73074.t1 | MTR_3g007190 | 30.000 | 160 | 95 | 5 | 45 | 191 | 109 | 264 | 3.18e-14 | 72.8 |
| MS.gene73074.t1 | MTR_3g022230 | 34.454 | 119 | 77 | 1 | 74 | 191 | 228 | 346 | 9.68e-15 | 74.3 |
| MS.gene73074.t1 | MTR_3g022230 | 40.000 | 110 | 57 | 3 | 1 | 103 | 1 | 108 | 1.04e-13 | 71.2 |
| MS.gene73074.t1 | MTR_3g014530 | 40.000 | 90 | 54 | 0 | 5 | 94 | 1 | 90 | 9.81e-15 | 70.1 |
| MS.gene73074.t1 | MTR_5g037450 | 34.848 | 132 | 82 | 3 | 65 | 195 | 219 | 347 | 1.25e-14 | 73.9 |
| MS.gene73074.t1 | MTR_3g022600 | 34.454 | 119 | 77 | 1 | 74 | 191 | 228 | 346 | 1.29e-14 | 73.9 |
| MS.gene73074.t1 | MTR_3g022600 | 39.175 | 97 | 57 | 2 | 1 | 97 | 1 | 95 | 4.66e-13 | 69.3 |
| MS.gene73074.t1 | MTR_0144s0060 | 39.516 | 124 | 63 | 4 | 74 | 191 | 211 | 328 | 1.54e-14 | 73.6 |
| MS.gene73074.t1 | MTR_0425s0020 | 34.454 | 119 | 77 | 1 | 74 | 191 | 228 | 346 | 1.56e-14 | 73.6 |
| MS.gene73074.t1 | MTR_0425s0020 | 36.434 | 129 | 78 | 3 | 1 | 129 | 1 | 125 | 3.52e-14 | 72.4 |
| MS.gene73074.t1 | MTR_3g014500 | 34.884 | 129 | 78 | 2 | 4 | 128 | 5 | 131 | 1.75e-14 | 70.1 |
| MS.gene73074.t1 | MTR_5g034770 | 35.965 | 114 | 72 | 1 | 79 | 191 | 212 | 325 | 2.10e-14 | 73.2 |
| MS.gene73074.t1 | MTR_3g022130 | 35.294 | 119 | 76 | 1 | 74 | 191 | 202 | 320 | 2.56e-14 | 72.8 |
| MS.gene73074.t1 | MTR_3g022130 | 40.206 | 97 | 56 | 2 | 1 | 97 | 1 | 95 | 2.36e-12 | 67.0 |
| MS.gene73074.t1 | MTR_8g106550 | 32.867 | 143 | 87 | 5 | 45 | 184 | 178 | 314 | 2.92e-14 | 72.8 |
| MS.gene73074.t1 | MTR_3g019000 | 41.237 | 97 | 56 | 1 | 1 | 97 | 1 | 96 | 3.16e-14 | 72.8 |
| MS.gene73074.t1 | MTR_5g071670 | 33.577 | 137 | 79 | 2 | 107 | 235 | 238 | 370 | 3.21e-14 | 72.8 |
| MS.gene73074.t1 | MTR_5g071670 | 43.299 | 97 | 44 | 2 | 14 | 105 | 5 | 95 | 7.55e-13 | 68.6 |
| MS.gene73074.t1 | MTR_3g022300 | 32.773 | 119 | 79 | 1 | 74 | 191 | 228 | 346 | 4.27e-14 | 72.4 |
| MS.gene73074.t1 | MTR_3g022300 | 40.816 | 98 | 56 | 2 | 1 | 98 | 1 | 96 | 5.34e-14 | 72.0 |
| MS.gene73074.t1 | MTR_6g047450 | 36.290 | 124 | 68 | 3 | 74 | 191 | 211 | 329 | 5.48e-14 | 72.0 |
| MS.gene73074.t1 | MTR_2g039090 | 42.353 | 85 | 49 | 0 | 107 | 191 | 241 | 325 | 6.09e-14 | 72.0 |
| MS.gene73074.t1 | MTR_2g039090 | 37.113 | 97 | 60 | 1 | 1 | 97 | 1 | 96 | 2.92e-12 | 67.0 |
| MS.gene73074.t1 | MTR_5g035240 | 34.146 | 123 | 79 | 2 | 74 | 195 | 221 | 342 | 6.63e-14 | 71.6 |
| MS.gene73074.t1 | MTR_5g040770 | 41.667 | 84 | 48 | 1 | 112 | 195 | 26 | 108 | 7.03e-14 | 71.6 |
| MS.gene73074.t1 | MTR_3g033160 | 42.529 | 87 | 50 | 0 | 1 | 87 | 30 | 116 | 7.78e-14 | 67.0 |
| MS.gene73074.t1 | MTR_5g072250 | 32.847 | 137 | 80 | 2 | 107 | 235 | 243 | 375 | 1.46e-13 | 70.5 |
| MS.gene73074.t1 | MTR_1g008240 | 30.488 | 164 | 107 | 3 | 74 | 234 | 213 | 372 | 2.30e-13 | 70.1 |
| MS.gene73074.t1 | MTR_1g008240 | 40.000 | 85 | 51 | 0 | 5 | 89 | 1 | 85 | 1.86e-12 | 67.4 |
| MS.gene73074.t1 | MTR_3g014320 | 43.590 | 78 | 44 | 0 | 20 | 97 | 19 | 96 | 2.98e-13 | 69.7 |
| MS.gene73074.t1 | MTR_3g014320 | 32.450 | 151 | 86 | 7 | 45 | 191 | 208 | 346 | 1.98e-12 | 67.4 |
| MS.gene73074.t1 | MTR_3g022920 | 37.931 | 116 | 62 | 4 | 1 | 112 | 1 | 110 | 3.07e-13 | 69.7 |
| MS.gene73074.t1 | MTR_3g022940 | 40.196 | 102 | 56 | 1 | 7 | 108 | 3 | 99 | 3.70e-13 | 69.3 |
| MS.gene73074.t1 | MTR_1g022380 | 42.000 | 100 | 47 | 2 | 13 | 107 | 4 | 97 | 3.71e-13 | 69.3 |
| MS.gene73074.t1 | MTR_3g021170 | 38.144 | 97 | 55 | 1 | 1 | 97 | 1 | 92 | 4.37e-13 | 69.3 |
| MS.gene73074.t1 | MTR_5g039570 | 40.909 | 88 | 44 | 1 | 112 | 191 | 223 | 310 | 4.65e-13 | 68.9 |
| MS.gene73074.t1 | MTR_5g072140 | 37.634 | 93 | 50 | 1 | 107 | 191 | 243 | 335 | 6.45e-13 | 68.6 |
| MS.gene73074.t1 | MTR_3g435210 | 32.558 | 172 | 95 | 6 | 22 | 191 | 2 | 154 | 7.19e-13 | 68.6 |
| MS.gene73074.t1 | MTR_5g071823 | 42.697 | 89 | 50 | 1 | 13 | 101 | 4 | 91 | 7.46e-13 | 68.6 |
| MS.gene73074.t1 | MTR_5g071850 | 42.697 | 89 | 50 | 1 | 13 | 101 | 4 | 91 | 7.46e-13 | 68.6 |
| MS.gene73074.t1 | MTR_0133s0030 | 34.711 | 121 | 74 | 2 | 74 | 191 | 212 | 330 | 8.07e-13 | 68.6 |
| MS.gene73074.t1 | MTR_5g071800 | 36.559 | 93 | 51 | 1 | 107 | 191 | 243 | 335 | 8.74e-13 | 68.6 |
| MS.gene73074.t1 | MTR_3g022870 | 36.667 | 120 | 67 | 1 | 1 | 120 | 1 | 111 | 9.94e-13 | 68.2 |
| MS.gene73074.t1 | MTR_3g021340 | 33.600 | 125 | 77 | 2 | 1 | 124 | 1 | 120 | 1.09e-12 | 68.2 |
| MS.gene73074.t1 | MTR_3g022870 | 36.667 | 120 | 67 | 1 | 1 | 120 | 1 | 111 | 1.11e-12 | 68.2 |
| MS.gene73074.t1 | MTR_6g046550 | 44.000 | 75 | 41 | 1 | 117 | 191 | 235 | 308 | 1.15e-12 | 67.8 |
| MS.gene73074.t1 | MTR_3g021380 | 34.646 | 127 | 77 | 2 | 1 | 126 | 4 | 125 | 1.24e-12 | 67.8 |
| MS.gene73074.t1 | MTR_5g035300 | 38.095 | 84 | 51 | 1 | 112 | 195 | 261 | 343 | 1.34e-12 | 67.4 |
| MS.gene73074.t1 | MTR_3g025360 | 33.333 | 120 | 77 | 2 | 74 | 191 | 236 | 354 | 1.47e-12 | 67.8 |
| MS.gene73074.t1 | MTR_3g025360 | 36.275 | 102 | 60 | 1 | 5 | 106 | 4 | 100 | 6.04e-12 | 65.9 |
| MS.gene73074.t1 | MTR_5g071310 | 36.559 | 93 | 51 | 1 | 107 | 191 | 239 | 331 | 2.71e-12 | 67.0 |
| MS.gene73074.t1 | MTR_5g071310 | 49.206 | 63 | 32 | 0 | 43 | 105 | 33 | 95 | 5.59e-11 | 63.2 |
| MS.gene73074.t1 | MTR_3g022400 | 30.252 | 119 | 82 | 1 | 74 | 191 | 204 | 322 | 3.33e-12 | 66.6 |
| MS.gene73074.t1 | MTR_3g021100 | 30.894 | 123 | 80 | 1 | 1 | 123 | 1 | 118 | 3.44e-12 | 66.6 |
| MS.gene73074.t1 | MTR_3g022400 | 30.252 | 119 | 82 | 1 | 74 | 191 | 204 | 322 | 3.50e-12 | 66.6 |
| MS.gene73074.t1 | MTR_5g070960 | 37.234 | 94 | 50 | 2 | 107 | 191 | 243 | 336 | 4.48e-12 | 66.2 |
| MS.gene73074.t1 | MTR_7g071940 | 54.839 | 62 | 28 | 0 | 44 | 105 | 34 | 95 | 4.82e-12 | 66.2 |
| MS.gene73074.t1 | MTR_7g071940 | 35.484 | 93 | 52 | 1 | 107 | 191 | 238 | 330 | 5.91e-12 | 65.9 |
| MS.gene73074.t1 | MTR_5g035480 | 35.294 | 119 | 66 | 2 | 79 | 191 | 231 | 344 | 5.28e-12 | 65.9 |
| MS.gene73074.t1 | MTR_7g078630 | 43.617 | 94 | 51 | 2 | 118 | 211 | 210 | 301 | 5.43e-12 | 65.9 |
| MS.gene73074.t1 | MTR_5g071470 | 36.559 | 93 | 51 | 1 | 107 | 191 | 243 | 335 | 5.83e-12 | 65.9 |
| MS.gene73074.t1 | MTR_1g023600 | 36.559 | 93 | 51 | 1 | 107 | 191 | 240 | 332 | 6.14e-12 | 65.9 |
| MS.gene73074.t1 | MTR_5g070470 | 45.679 | 81 | 43 | 1 | 13 | 93 | 4 | 83 | 6.28e-12 | 65.9 |
| MS.gene73074.t1 | MTR_5g070470 | 31.690 | 142 | 76 | 4 | 107 | 235 | 243 | 376 | 4.85e-11 | 63.2 |
| MS.gene73074.t1 | MTR_7g091140 | 37.008 | 127 | 74 | 3 | 114 | 236 | 279 | 403 | 7.94e-12 | 65.5 |
| MS.gene73074.t1 | MTR_5g070490 | 43.678 | 87 | 38 | 2 | 12 | 93 | 3 | 83 | 9.31e-12 | 65.5 |
| MS.gene73074.t1 | MTR_5g070490 | 31.387 | 137 | 83 | 2 | 107 | 235 | 243 | 376 | 2.58e-11 | 63.9 |
| MS.gene73074.t1 | MTR_6g046930 | 33.333 | 144 | 82 | 4 | 74 | 211 | 209 | 344 | 1.35e-11 | 64.7 |
| MS.gene73074.t1 | MTR_6g046440 | 32.639 | 144 | 91 | 3 | 74 | 214 | 210 | 350 | 1.52e-11 | 64.7 |
| MS.gene73074.t1 | MTR_1g047910 | 38.095 | 126 | 64 | 5 | 114 | 227 | 277 | 400 | 1.61e-11 | 64.7 |
| MS.gene73074.t1 | MTR_8g011280 | 28.846 | 156 | 102 | 4 | 87 | 235 | 95 | 248 | 1.68e-11 | 64.3 |
| MS.gene73074.t1 | MTR_3g023320 | 36.301 | 146 | 77 | 5 | 74 | 211 | 211 | 348 | 1.94e-11 | 64.3 |
| MS.gene73074.t1 | MTR_7g091550 | 45.745 | 94 | 49 | 2 | 118 | 211 | 286 | 377 | 2.03e-11 | 64.3 |
| MS.gene73074.t1 | MTR_7g078300 | 43.617 | 94 | 51 | 2 | 118 | 211 | 276 | 367 | 2.04e-11 | 64.3 |
| MS.gene73074.t1 | MTR_7g491180 | 28.302 | 212 | 123 | 6 | 50 | 244 | 211 | 410 | 2.05e-11 | 64.3 |
| MS.gene73074.t1 | MTR_7g091190 | 28.302 | 212 | 123 | 6 | 50 | 244 | 211 | 410 | 2.05e-11 | 64.3 |
| MS.gene73074.t1 | MTR_4g094540 | 34.921 | 126 | 68 | 4 | 116 | 230 | 268 | 390 | 2.10e-11 | 64.3 |
| MS.gene73074.t1 | MTR_3g035810 | 32.407 | 108 | 68 | 1 | 1 | 108 | 1 | 103 | 2.23e-11 | 64.3 |
| MS.gene73074.t1 | MTR_7g078640 | 43.617 | 94 | 51 | 2 | 118 | 211 | 276 | 367 | 2.30e-11 | 63.9 |
| MS.gene73074.t1 | MTR_3g086070 | 33.099 | 142 | 87 | 4 | 74 | 211 | 210 | 347 | 2.40e-11 | 63.9 |
| MS.gene73074.t1 | MTR_1g078490 | 45.333 | 75 | 41 | 0 | 117 | 191 | 268 | 342 | 2.52e-11 | 63.9 |
| MS.gene73074.t1 | MTR_5g072340 | 36.170 | 94 | 51 | 2 | 107 | 191 | 243 | 336 | 3.27e-11 | 63.5 |
| MS.gene73074.t1 | MTR_4g019360 | 40.789 | 76 | 44 | 1 | 117 | 191 | 225 | 300 | 3.39e-11 | 63.5 |
| MS.gene73074.t1 | MTR_0133s0020 | 31.933 | 119 | 80 | 1 | 74 | 191 | 210 | 328 | 3.42e-11 | 63.5 |
| MS.gene73074.t1 | MTR_1g047870 | 34.228 | 149 | 86 | 6 | 87 | 227 | 18 | 162 | 3.62e-11 | 63.2 |
| MS.gene73074.t1 | MTR_3g026660 | 37.500 | 80 | 50 | 0 | 112 | 191 | 261 | 340 | 5.05e-11 | 63.2 |
| MS.gene73074.t1 | MTR_8g011180 | 47.761 | 67 | 35 | 0 | 118 | 184 | 267 | 333 | 5.12e-11 | 63.2 |
| MS.gene73074.t1 | MTR_3g026660 | 37.500 | 80 | 50 | 0 | 112 | 191 | 261 | 340 | 5.58e-11 | 63.2 |
| MS.gene73074.t1 | MTR_5g040900 | 47.059 | 85 | 36 | 3 | 13 | 93 | 4 | 83 | 6.14e-11 | 62.8 |
| MS.gene73074.t1 | MTR_6g016430 | 45.714 | 70 | 38 | 0 | 118 | 187 | 257 | 326 | 6.25e-11 | 62.8 |
| MS.gene73074.t1 | MTR_4g126000 | 42.045 | 88 | 40 | 2 | 11 | 93 | 2 | 83 | 6.78e-11 | 62.8 |
| MS.gene73074.t1 | MTR_5g037500 | 41.667 | 72 | 42 | 0 | 112 | 183 | 261 | 332 | 7.39e-11 | 62.8 |
| MS.gene73074.t1 | MTR_6g046480 | 33.613 | 119 | 77 | 2 | 74 | 191 | 212 | 329 | 7.81e-11 | 62.4 |
| MS.gene73074.t1 | MTR_4g055630 | 36.559 | 93 | 51 | 2 | 107 | 191 | 243 | 335 | 8.86e-11 | 62.4 |
| MS.gene73074.t1 | MTR_5g071780 | 54.902 | 51 | 23 | 0 | 43 | 93 | 33 | 83 | 9.14e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73074.t1 | AT3G14470 | 48.684 | 76 | 33 | 1 | 118 | 187 | 268 | 343 | 9.26e-17 | 80.1 |
| MS.gene73074.t1 | AT3G14470 | 41.758 | 91 | 53 | 0 | 4 | 94 | 2 | 92 | 3.78e-14 | 72.4 |
| MS.gene73074.t1 | AT3G14470 | 48.684 | 76 | 33 | 1 | 118 | 187 | 268 | 343 | 9.26e-17 | 80.1 |
| MS.gene73074.t1 | AT3G14470 | 41.758 | 91 | 53 | 0 | 4 | 94 | 2 | 92 | 3.78e-14 | 72.4 |
Find 41 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAATTCTTTGTTGTTT+TGG | 0.196460 | 3.2:+10958152 | MS.gene73074:CDS |
| TGAGATTAGACCATCGAATT+TGG | 0.252878 | 3.2:-10958925 | None:intergenic |
| CTATGTGGCTGACGACTTAT+TGG | 0.308821 | 3.2:+10957600 | MS.gene73074:CDS |
| TCCAAACAGTTCAAACTTAC+AGG | 0.309343 | 3.2:+10958292 | MS.gene73074:CDS |
| GCCTGTAAGTTTGAACTGTT+TGG | 0.322236 | 3.2:-10958293 | None:intergenic |
| AACAATCTTCATTCGACAAC+TGG | 0.341257 | 3.2:-10958320 | None:intergenic |
| AGGATCAAATTCGCAACTTC+AGG | 0.363821 | 3.2:-10957436 | None:intergenic |
| ACGAGTCTTGATGTTAATCT+TGG | 0.370701 | 3.2:-10958889 | None:intergenic |
| GGATTGAGGATTATGTCAAT+TGG | 0.371057 | 3.2:+10958184 | MS.gene73074:CDS |
| CAAGAAATTGCTTCCGAGGC+TGG | 0.388652 | 3.2:+10957474 | MS.gene73074:CDS |
| TTCTTTAGATCGGAAGAACT+TGG | 0.408884 | 3.2:+10958858 | MS.gene73074:CDS |
| AGTTGTCGAATGAAGATTGT+TGG | 0.425009 | 3.2:+10958322 | MS.gene73074:CDS |
| GATTGAGGATTATGTCAATT+GGG | 0.426159 | 3.2:+10958185 | MS.gene73074:CDS |
| TGCAAGGTATGTTGAAAGAA+AGG | 0.426419 | 3.2:+10958133 | MS.gene73074:intron |
| ATGCTGAGAAGAAACAGATC+AGG | 0.427075 | 3.2:+10957533 | MS.gene73074:CDS |
| CCCTTAATCCCACGTTGAAA+AGG | 0.427699 | 3.2:-10958222 | None:intergenic |
| TCAGAAAACTTTGAAGTACT+TGG | 0.451228 | 3.2:+10958945 | MS.gene73074:CDS |
| GAAGTTGCGAATTTGATCCT+TGG | 0.457982 | 3.2:+10957439 | MS.gene73074:CDS |
| TCTTGTCAAGCTTGTTTCCA+AGG | 0.473652 | 3.2:-10957456 | None:intergenic |
| CTCAAAGTTGTCTCCAGCCT+CGG | 0.475982 | 3.2:-10957487 | None:intergenic |
| GGGATTCTGATGTCAACAAC+TGG | 0.477454 | 3.2:+10957554 | MS.gene73074:CDS |
| CGTAACAACTCGTAGTGAAA+AGG | 0.477744 | 3.2:+10958257 | MS.gene73074:CDS |
| TTTGGATGATGTTTGGATTG+AGG | 0.490421 | 3.2:+10958170 | MS.gene73074:CDS |
| CAATGTGCAAGATAGGGGTA+TGG | 0.515071 | 3.2:+10957684 | MS.gene73074:CDS |
| TGCTGCATTCAACAATGAAA+AGG | 0.517179 | 3.2:+10959013 | MS.gene73074:CDS |
| GTTGCATTCCTACCAGATCC+CGG | 0.523744 | 3.2:-10958375 | None:intergenic |
| TGGAGAATTCTTCTTTAGAT+CGG | 0.528882 | 3.2:+10958848 | MS.gene73074:CDS |
| TTGCATTCCTACCAGATCCC+GGG | 0.534984 | 3.2:-10958374 | None:intergenic |
| TTGTCATTCACCAAATTCGA+TGG | 0.544692 | 3.2:+10958915 | MS.gene73074:CDS |
| ATCCCGGGGTAAAACATGCA+TGG | 0.548445 | 3.2:-10958359 | None:intergenic |
| TCTTTAGATCGGAAGAACTT+GGG | 0.552754 | 3.2:+10958859 | MS.gene73074:CDS |
| TCCCGGGGTAAAACATGCAT+GGG | 0.562220 | 3.2:-10958358 | None:intergenic |
| TTGACAAGAAATTGCTTCCG+AGG | 0.563692 | 3.2:+10957470 | MS.gene73074:CDS |
| ATGGCAGAAACAGTGATTGG+TGG | 0.581468 | 3.2:+10957364 | MS.gene73074:CDS |
| ATCATGGCAGAAACAGTGAT+TGG | 0.604879 | 3.2:+10957361 | None:intergenic |
| GCAGCAACTTCAAAGTTGAT+CGG | 0.616486 | 3.2:-10958996 | None:intergenic |
| GCTGGAGACAACTTTGAGAG+TGG | 0.630046 | 3.2:+10957492 | MS.gene73074:CDS |
| TGCTGAGAAGAAACAGATCA+GGG | 0.634637 | 3.2:+10957534 | MS.gene73074:CDS |
| TCTCAAAGATGCTGTCTATG+TGG | 0.644943 | 3.2:+10957585 | MS.gene73074:CDS |
| TGCATTCCTACCAGATCCCG+GGG | 0.657117 | 3.2:-10958373 | None:intergenic |
| CAACATCAAAGAAAGCAGAG+AGG | 0.708797 | 3.2:-10957393 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGATTTAATCTTGTTG+TGG | + | chr3.2:10958658-10958677 | MS.gene73074:intron | 20.0% |
| !! | TTCTCAAATTCATAATCATT+GGG | - | chr3.2:10958639-10958658 | None:intergenic | 20.0% |
| !! | TTTCTCAAATTCATAATCAT+TGG | - | chr3.2:10958640-10958659 | None:intergenic | 20.0% |
| !!! | ATGTATTTGATTTTAAAGCT+TGG | + | chr3.2:10958001-10958020 | MS.gene73074:intron | 20.0% |
| !!! | TGTATTTGATTTTAAAGCTT+GGG | + | chr3.2:10958002-10958021 | MS.gene73074:intron | 20.0% |
| ! | AAAAACTGTGATTCAAAAAG+AGG | + | chr3.2:10957636-10957655 | MS.gene73074:CDS | 25.0% |
| !! | TTATAAAACCTTTTCAACGT+GGG | + | chr3.2:10958214-10958233 | MS.gene73074:CDS | 25.0% |
| !!! | AAGGAAATTCTTTGTTGTTT+TGG | + | chr3.2:10958152-10958171 | MS.gene73074:CDS | 25.0% |
| !!! | TTTTTCAACAATCAAGTACT+CGG | + | chr3.2:10958772-10958791 | MS.gene73074:intron | 25.0% |
| AAGTGAAAGTAAGATCATTC+CGG | + | chr3.2:10958545-10958564 | MS.gene73074:intron | 30.0% | |
| CATGATTTAGCAACATTCTT+AGG | + | chr3.2:10958825-10958844 | MS.gene73074:intron | 30.0% | |
| GATTGAGGATTATGTCAATT+GGG | + | chr3.2:10958185-10958204 | MS.gene73074:CDS | 30.0% | |
| TGATAACTAATTCTCAATGC+CGG | - | chr3.2:10958567-10958586 | None:intergenic | 30.0% | |
| TGGAGAATTCTTCTTTAGAT+CGG | + | chr3.2:10958848-10958867 | MS.gene73074:CDS | 30.0% | |
| TTAGATGATAACAGTGATGA+TGG | + | chr3.2:10957886-10957905 | MS.gene73074:intron | 30.0% | |
| ! | AAAAGGAATGACTTTAGAAG+AGG | + | chr3.2:10958710-10958729 | MS.gene73074:intron | 30.0% |
| ! | AGAGATTGTTAAAAAGTGCA+AGG | + | chr3.2:10958419-10958438 | MS.gene73074:intron | 30.0% |
| ! | CTTATAAAACCTTTTCAACG+TGG | + | chr3.2:10958213-10958232 | MS.gene73074:CDS | 30.0% |
| ! | GAGATTGTTAAAAAGTGCAA+GGG | + | chr3.2:10958420-10958439 | MS.gene73074:intron | 30.0% |
| ! | GCAACATCTCTAGAAAAAAT+TGG | + | chr3.2:10958393-10958412 | MS.gene73074:intron | 30.0% |
| ! | TGAAGAGTTTGACATTTTGA+GGG | + | chr3.2:10958035-10958054 | MS.gene73074:intron | 30.0% |
| ! | TGATTTAATCTTGTTGTGGA+TGG | + | chr3.2:10958662-10958681 | MS.gene73074:intron | 30.0% |
| !! | TCAGAAAACTTTGAAGTACT+TGG | + | chr3.2:10958945-10958964 | MS.gene73074:CDS | 30.0% |
| !! | TCTAAAGTCATTCCTTTTCT+CGG | - | chr3.2:10958708-10958727 | None:intergenic | 30.0% |
| !! | TGCACTTTTTAACAATCTCT+CGG | - | chr3.2:10958419-10958438 | None:intergenic | 30.0% |
| !! | TTTTTCAATGTGCAAGATAG+GGG | + | chr3.2:10957679-10957698 | MS.gene73074:CDS | 30.0% |
| !!! | CTTTTTCAATGTGCAAGATA+GGG | + | chr3.2:10957678-10957697 | MS.gene73074:CDS | 30.0% |
| !!! | TTGTTGTTTTGGATGATGTT+TGG | + | chr3.2:10958163-10958182 | MS.gene73074:CDS | 30.0% |
| AACAATCTTCATTCGACAAC+TGG | - | chr3.2:10958323-10958342 | None:intergenic | 35.0% | |
| ACAAAACAGCGTTTCAAATG+TGG | - | chr3.2:10958600-10958619 | None:intergenic | 35.0% | |
| ACGAGTCTTGATGTTAATCT+TGG | - | chr3.2:10958892-10958911 | None:intergenic | 35.0% | |
| AGTTGTCGAATGAAGATTGT+TGG | + | chr3.2:10958322-10958341 | MS.gene73074:CDS | 35.0% | |
| ATGTACTGAAGAGTGACATT+TGG | + | chr3.2:10958511-10958530 | MS.gene73074:intron | 35.0% | |
| GATTTAGCAACATTCTTAGG+TGG | + | chr3.2:10958828-10958847 | MS.gene73074:intron | 35.0% | |
| GGATTGAGGATTATGTCAAT+TGG | + | chr3.2:10958184-10958203 | MS.gene73074:CDS | 35.0% | |
| TCCAAACAGTTCAAACTTAC+AGG | + | chr3.2:10958292-10958311 | MS.gene73074:CDS | 35.0% | |
| TCTTTAGATCGGAAGAACTT+GGG | + | chr3.2:10958859-10958878 | MS.gene73074:CDS | 35.0% | |
| TGAGATTAGACCATCGAATT+TGG | - | chr3.2:10958928-10958947 | None:intergenic | 35.0% | |
| TGCAAGGTATGTTGAAAGAA+AGG | + | chr3.2:10958133-10958152 | MS.gene73074:intron | 35.0% | |
| TGCTGCATTCAACAATGAAA+AGG | + | chr3.2:10959013-10959032 | MS.gene73074:CDS | 35.0% | |
| TGTACTGAAGAGTGACATTT+GGG | + | chr3.2:10958512-10958531 | MS.gene73074:intron | 35.0% | |
| TTCTTTAGATCGGAAGAACT+TGG | + | chr3.2:10958858-10958877 | MS.gene73074:CDS | 35.0% | |
| TTGTCATTCACCAAATTCGA+TGG | + | chr3.2:10958915-10958934 | MS.gene73074:CDS | 35.0% | |
| TTTGGATGATGTTTGGATTG+AGG | + | chr3.2:10958170-10958189 | MS.gene73074:CDS | 35.0% | |
| ! | AAAGACTACTTTAGCTCAGT+TGG | + | chr3.2:10957954-10957973 | MS.gene73074:intron | 35.0% |
| ! | CTGAAGAGTTTGACATTTTG+AGG | + | chr3.2:10958034-10958053 | MS.gene73074:intron | 35.0% |
| ! | TTACTTCAACTCGATTTGCA+AGG | + | chr3.2:10958117-10958136 | MS.gene73074:intron | 35.0% |
| !!! | GCTTTTTCAATGTGCAAGAT+AGG | + | chr3.2:10957677-10957696 | MS.gene73074:CDS | 35.0% |
| AAACAGCGTTTCAAATGTGG+AGG | - | chr3.2:10958597-10958616 | None:intergenic | 40.0% | |
| AACAGCGTTTCAAATGTGGA+GGG | - | chr3.2:10958596-10958615 | None:intergenic | 40.0% | |
| AGCTTCAATAGCGAGATACA+TGG | - | chr3.2:10959041-10959060 | None:intergenic | 40.0% | |
| AGGATCAAATTCGCAACTTC+AGG | - | chr3.2:10957439-10957458 | None:intergenic | 40.0% | |
| AGTGACTGTGATACCTATTG+TGG | + | chr3.2:10957915-10957934 | MS.gene73074:intron | 40.0% | |
| ATATGGCAGGGATAAAGACA+AGG | + | chr3.2:10957843-10957862 | MS.gene73074:intron | 40.0% | |
| ATGCTGAGAAGAAACAGATC+AGG | + | chr3.2:10957533-10957552 | MS.gene73074:CDS | 40.0% | |
| CAACATCAAAGAAAGCAGAG+AGG | - | chr3.2:10957396-10957415 | None:intergenic | 40.0% | |
| CAAGACGGATCTTGTGTATA+TGG | + | chr3.2:10957826-10957845 | MS.gene73074:intron | 40.0% | |
| CATATACACAAGATCCGTCT+TGG | - | chr3.2:10957828-10957847 | None:intergenic | 40.0% | |
| CGGTGGCAATAAAAGATCTT+CGG | - | chr3.2:10958688-10958707 | None:intergenic | 40.0% | |
| CGTAACAACTCGTAGTGAAA+AGG | + | chr3.2:10958257-10958276 | MS.gene73074:CDS | 40.0% | |
| GAAGTTGCGAATTTGATCCT+TGG | + | chr3.2:10957439-10957458 | MS.gene73074:CDS | 40.0% | |
| GACATGTTGCCTGATTCAAT+AGG | + | chr3.2:10959104-10959123 | MS.gene73074:intron | 40.0% | |
| GCCTGTAAGTTTGAACTGTT+TGG | - | chr3.2:10958296-10958315 | None:intergenic | 40.0% | |
| GTGACTGTGATACCTATTGT+GGG | + | chr3.2:10957916-10957935 | MS.gene73074:intron | 40.0% | |
| GTGATACCTATTGTGGGTAT+GGG | + | chr3.2:10957922-10957941 | MS.gene73074:intron | 40.0% | |
| TCTCAAAGATGCTGTCTATG+TGG | + | chr3.2:10957585-10957604 | MS.gene73074:CDS | 40.0% | |
| TGAACTCAAAGAGATTGCAG+TGG | + | chr3.2:10957768-10957787 | MS.gene73074:intron | 40.0% | |
| TGCTGAGAAGAAACAGATCA+GGG | + | chr3.2:10957534-10957553 | MS.gene73074:CDS | 40.0% | |
| TGTGATACCTATTGTGGGTA+TGG | + | chr3.2:10957921-10957940 | MS.gene73074:intron | 40.0% | |
| TTGACAAGAAATTGCTTCCG+AGG | + | chr3.2:10957470-10957489 | MS.gene73074:CDS | 40.0% | |
| ! | AAAGTCATTCCTTTTCTCGG+TGG | - | chr3.2:10958705-10958724 | None:intergenic | 40.0% |
| ! | ACCTTTTCAACGTGGGATTA+AGG | + | chr3.2:10958221-10958240 | MS.gene73074:CDS | 40.0% |
| ! | CCTTTTCAACGTGGGATTAA+GGG | + | chr3.2:10958222-10958241 | MS.gene73074:CDS | 40.0% |
| ! | CTTTTATTGCCACCGAGAAA+AGG | + | chr3.2:10958693-10958712 | MS.gene73074:intron | 40.0% |
| ! | GCAGCAACTTCAAAGTTGAT+CGG | - | chr3.2:10958999-10959018 | None:intergenic | 40.0% |
| ! | GGAATGACTTTAGAAGAGGT+TGG | + | chr3.2:10958714-10958733 | MS.gene73074:intron | 40.0% |
| ! | TCTTGTCAAGCTTGTTTCCA+AGG | - | chr3.2:10957459-10957478 | None:intergenic | 40.0% |
| !! | GAAAACATGGCATAGTGGAT+TGG | + | chr3.2:10958484-10958503 | MS.gene73074:intron | 40.0% |
| ACGGATCTTGTGTATATGGC+AGG | + | chr3.2:10957830-10957849 | MS.gene73074:intron | 45.0% | |
| ATACCTATTGTGGGTATGGG+AGG | + | chr3.2:10957925-10957944 | MS.gene73074:intron | 45.0% | |
| ATGGCAGAAACAGTGATTGG+TGG | + | chr3.2:10957364-10957383 | MS.gene73074:CDS | 45.0% | |
| CAATGTGCAAGATAGGGGTA+TGG | + | chr3.2:10957684-10957703 | MS.gene73074:CDS | 45.0% | |
| CCATCAACATCTCTCCAAGA+CGG | + | chr3.2:10957811-10957830 | MS.gene73074:intron | 45.0% | |
| CCCTTAATCCCACGTTGAAA+AGG | - | chr3.2:10958225-10958244 | None:intergenic | 45.0% | |
| CCTTTAGCAGCACAATCACT+TGG | + | chr3.2:10958447-10958466 | MS.gene73074:intron | 45.0% | |
| CGGATCTTGTGTATATGGCA+GGG | + | chr3.2:10957831-10957850 | MS.gene73074:intron | 45.0% | |
| CTATGTGGCTGACGACTTAT+TGG | + | chr3.2:10957600-10957619 | MS.gene73074:CDS | 45.0% | |
| GCGAAGAAAACATGGCATAG+TGG | + | chr3.2:10958479-10958498 | MS.gene73074:intron | 45.0% | |
| GGCATTCTGCGAAGAAAACA+TGG | + | chr3.2:10958471-10958490 | MS.gene73074:intron | 45.0% | |
| GGGATTCTGATGTCAACAAC+TGG | + | chr3.2:10957554-10957573 | MS.gene73074:CDS | 45.0% | |
| TACCTATTGTGGGTATGGGA+GGG | + | chr3.2:10957926-10957945 | MS.gene73074:intron | 45.0% | |
| TTAGCAGCACAATCACTTGG+AGG | + | chr3.2:10958450-10958469 | MS.gene73074:intron | 45.0% | |
| ! | AACCCATGCATGTTTTACCC+CGG | + | chr3.2:10958356-10958375 | MS.gene73074:CDS | 45.0% |
| ! | CCAAGTGATTGTGCTGCTAA+AGG | - | chr3.2:10958450-10958469 | None:intergenic | 45.0% |
| ACCTATTGTGGGTATGGGAG+GGG | + | chr3.2:10957927-10957946 | MS.gene73074:intron | 50.0% | |
| ATCCCGGGGTAAAACATGCA+TGG | - | chr3.2:10958362-10958381 | None:intergenic | 50.0% | |
| CAAGAAATTGCTTCCGAGGC+TGG | + | chr3.2:10957474-10957493 | MS.gene73074:CDS | 50.0% | |
| CCGTCTTGGAGAGATGTTGA+TGG | - | chr3.2:10957814-10957833 | None:intergenic | 50.0% | |
| CTCAAAGTTGTCTCCAGCCT+CGG | - | chr3.2:10957490-10957509 | None:intergenic | 50.0% | |
| GGCAGGGATAAAGACAAGGA+GGG | + | chr3.2:10957847-10957866 | MS.gene73074:intron | 50.0% | |
| GTTGCATTCCTACCAGATCC+CGG | - | chr3.2:10958378-10958397 | None:intergenic | 50.0% | |
| TCCCGGGGTAAAACATGCAT+GGG | - | chr3.2:10958361-10958380 | None:intergenic | 50.0% | |
| TGGCAGGGATAAAGACAAGG+AGG | + | chr3.2:10957846-10957865 | MS.gene73074:intron | 50.0% | |
| TTGCATTCCTACCAGATCCC+GGG | - | chr3.2:10958377-10958396 | None:intergenic | 50.0% | |
| ! | ACCCATGCATGTTTTACCCC+GGG | + | chr3.2:10958357-10958376 | MS.gene73074:CDS | 50.0% |
| ! | GCTGGAGACAACTTTGAGAG+TGG | + | chr3.2:10957492-10957511 | MS.gene73074:CDS | 50.0% |
| ACCCCTCCCATACCCACAAT+AGG | - | chr3.2:10957931-10957950 | None:intergenic | 55.0% | |
| ATTGTGGGTATGGGAGGGGT+AGG | + | chr3.2:10957931-10957950 | MS.gene73074:intron | 55.0% | |
| TGCATTCCTACCAGATCCCG+GGG | - | chr3.2:10958376-10958395 | None:intergenic | 55.0% | |
| ! | GCATGTTTTACCCCGGGATC+TGG | + | chr3.2:10958363-10958382 | MS.gene73074:CDS | 55.0% |
| ! | GTTTTACCCCGGGATCTGGT+AGG | + | chr3.2:10958367-10958386 | MS.gene73074:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 10957364 | 10959134 | 10957364 | ID=MS.gene73074 |
| chr3.2 | mRNA | 10957364 | 10959134 | 10957364 | ID=MS.gene73074.t1;Parent=MS.gene73074 |
| chr3.2 | exon | 10957364 | 10957709 | 10957364 | ID=MS.gene73074.t1.exon1;Parent=MS.gene73074.t1 |
| chr3.2 | CDS | 10957364 | 10957709 | 10957364 | ID=cds.MS.gene73074.t1;Parent=MS.gene73074.t1 |
| chr3.2 | exon | 10958139 | 10958384 | 10958139 | ID=MS.gene73074.t1.exon2;Parent=MS.gene73074.t1 |
| chr3.2 | CDS | 10958139 | 10958384 | 10958139 | ID=cds.MS.gene73074.t1;Parent=MS.gene73074.t1 |
| chr3.2 | exon | 10958847 | 10959034 | 10958847 | ID=MS.gene73074.t1.exon3;Parent=MS.gene73074.t1 |
| chr3.2 | CDS | 10958847 | 10959034 | 10958847 | ID=cds.MS.gene73074.t1;Parent=MS.gene73074.t1 |
| chr3.2 | exon | 10959126 | 10959134 | 10959126 | ID=MS.gene73074.t1.exon4;Parent=MS.gene73074.t1 |
| chr3.2 | CDS | 10959126 | 10959134 | 10959126 | ID=cds.MS.gene73074.t1;Parent=MS.gene73074.t1 |
| Gene Sequence |
| Protein sequence |
