Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73389.t1 | XP_003624502.1 | 97.1 | 1023 | 29 | 1 | 1 | 1023 | 1 | 1022 | 0.00E+00 | 1992.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73389.t1 | P94078 | 73.3 | 1010 | 263 | 4 | 1 | 1009 | 1 | 1004 | 0.0e+00 | 1518.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73389.t1 | G7KX96 | 97.1 | 1023 | 29 | 1 | 1 | 1023 | 1 | 1022 | 0.0e+00 | 1992.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene73389 | 0.831461 | 1.65E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene73389 | 0.8005 | 1.40E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene73389 | 0.848479 | 5.97E-60 | -1.69E-46 |
| MS.gene051859 | MS.gene73389 | 0.830239 | 3.28E-55 | -1.69E-46 |
| MS.gene059015 | MS.gene73389 | 0.806071 | 9.83E-50 | -1.69E-46 |
| MS.gene059154 | MS.gene73389 | 0.818303 | 2.10E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73389 | MS.gene065392 | PPI |
| MS.gene73389 | MS.gene73391 | PPI |
| MS.gene033714 | MS.gene73389 | PPI |
| MS.gene73389 | MS.gene024279 | PPI |
| MS.gene033712 | MS.gene73389 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73389.t1 | MTR_7g084040 | 97.067 | 1023 | 29 | 1 | 1 | 1023 | 1 | 1022 | 0.0 | 2060 |
| MS.gene73389.t1 | MTR_7g084030 | 68.379 | 1012 | 312 | 5 | 1 | 1009 | 46 | 1052 | 0.0 | 1453 |
| MS.gene73389.t1 | MTR_3g098650 | 67.632 | 1001 | 314 | 7 | 15 | 1008 | 17 | 1014 | 0.0 | 1442 |
| MS.gene73389.t1 | MTR_8g075330 | 58.992 | 1012 | 397 | 4 | 7 | 1008 | 15 | 1018 | 0.0 | 1275 |
| MS.gene73389.t1 | MTR_7g084030 | 68.719 | 812 | 249 | 3 | 1 | 811 | 1 | 808 | 0.0 | 1183 |
| MS.gene73389.t1 | MTR_6g008850 | 27.721 | 873 | 490 | 25 | 35 | 820 | 137 | 955 | 9.96e-89 | 309 |
| MS.gene73389.t1 | MTR_4g071680 | 26.575 | 873 | 487 | 25 | 35 | 820 | 137 | 942 | 5.47e-78 | 278 |
| MS.gene73389.t1 | MTR_3g013720 | 73.469 | 49 | 13 | 0 | 48 | 96 | 11 | 59 | 1.40e-18 | 81.3 |
| MS.gene73389.t1 | MTR_2g066850 | 47.872 | 94 | 44 | 1 | 818 | 906 | 458 | 551 | 5.14e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73389.t1 | AT3G26720 | 73.267 | 1010 | 263 | 4 | 1 | 1009 | 1 | 1004 | 0.0 | 1562 |
| MS.gene73389.t1 | AT3G26720 | 73.523 | 948 | 246 | 3 | 1 | 947 | 1 | 944 | 0.0 | 1478 |
| MS.gene73389.t1 | AT3G26720 | 73.706 | 947 | 244 | 3 | 1 | 946 | 1 | 943 | 0.0 | 1477 |
| MS.gene73389.t1 | AT3G26720 | 73.781 | 923 | 237 | 3 | 1 | 922 | 1 | 919 | 0.0 | 1445 |
| MS.gene73389.t1 | AT3G26720 | 73.753 | 922 | 237 | 3 | 1 | 921 | 1 | 918 | 0.0 | 1443 |
| MS.gene73389.t1 | AT5G13980 | 65.256 | 1016 | 335 | 7 | 1 | 1006 | 1 | 1008 | 0.0 | 1387 |
| MS.gene73389.t1 | AT5G13980 | 65.256 | 1016 | 335 | 7 | 1 | 1006 | 1 | 1008 | 0.0 | 1387 |
| MS.gene73389.t1 | AT5G13980 | 65.016 | 929 | 309 | 6 | 1 | 921 | 1 | 921 | 0.0 | 1278 |
| MS.gene73389.t1 | AT5G66150 | 57.797 | 1026 | 403 | 6 | 6 | 1008 | 16 | 1034 | 0.0 | 1231 |
| MS.gene73389.t1 | AT5G66150 | 57.838 | 1027 | 402 | 7 | 6 | 1008 | 16 | 1035 | 0.0 | 1229 |
| MS.gene73389.t1 | AT5G66150 | 55.882 | 748 | 299 | 7 | 285 | 1008 | 1 | 741 | 0.0 | 851 |
| MS.gene73389.t1 | AT5G14950 | 27.543 | 875 | 492 | 26 | 35 | 820 | 151 | 972 | 7.93e-86 | 301 |
Find 235 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTATTGGCTTGCATTTC+CGG | 0.117350 | 7.2:+23452555 | MS.gene73389:CDS |
| TGCATCTGCACTTGCTTTAT+TGG | 0.200055 | 7.2:+23451134 | MS.gene73389:CDS |
| TACAAGTAGGCCAGCTTTAA+AGG | 0.202361 | 7.2:+23450709 | MS.gene73389:CDS |
| TCATTCTTTCAGGTTAATTT+AGG | 0.202674 | 7.2:+23455023 | MS.gene73389:intron |
| TTATGCAGATTCGAGATTTC+AGG | 0.202796 | 7.2:+23454631 | MS.gene73389:intron |
| AACCTGCTGATCAGATTTAA+TGG | 0.241905 | 7.2:-23453864 | None:intergenic |
| TGATGTTTCCCAACCTATTC+AGG | 0.255739 | 7.2:+23449446 | MS.gene73389:CDS |
| AGATAGAGCCAAACGATTAA+AGG | 0.256000 | 7.2:+23449198 | MS.gene73389:CDS |
| TGTCCTGCGCGGTCCGATAT+TGG | 0.263077 | 7.2:+23453992 | MS.gene73389:CDS |
| ACTTCATTTCAGATATTTAC+TGG | 0.278999 | 7.2:+23449372 | MS.gene73389:intron |
| ACCTGCTGGAAGCCTGTTAC+AGG | 0.280988 | 7.2:-23451189 | None:intergenic |
| ATGGACGCGACTTCATTAAA+AGG | 0.290746 | 7.2:+23454492 | MS.gene73389:CDS |
| AGATTAGTTTGGAAGGTAGA+AGG | 0.292289 | 7.2:+23457406 | MS.gene73389:CDS |
| AGGTTGTTTGGCAAGGTTCC+AGG | 0.308728 | 7.2:+23449233 | MS.gene73389:CDS |
| TGGAAAAGAAGAGATTAGTT+TGG | 0.318017 | 7.2:+23457395 | MS.gene73389:CDS |
| GCAGTTCAGGCTTACTTACT+TGG | 0.318307 | 7.2:+23448983 | MS.gene73389:CDS |
| CACCTATACGGTCAATTCTA+AGG | 0.318459 | 7.2:-23455692 | None:intergenic |
| GCTATCAATATGCTAATTCA+TGG | 0.319606 | 7.2:+23449991 | MS.gene73389:CDS |
| ACATAGATAAACTTGCGATT+TGG | 0.321410 | 7.2:-23448314 | None:intergenic |
| TCACATGCGAACTTGATCTT+TGG | 0.334210 | 7.2:-23451161 | None:intergenic |
| ACCGTTGCTGTTGGCTTTCA+CGG | 0.335617 | 7.2:+23455758 | MS.gene73389:CDS |
| AGTTCAACAACCAGCTTTGT+AGG | 0.342923 | 7.2:-23457475 | None:intergenic |
| TCTTGGTGGACCGCTCAGTT+GGG | 0.352125 | 7.2:+23455081 | MS.gene73389:CDS |
| AGGCTCCAGTGAAGAGTCTA+AGG | 0.354287 | 7.2:+23457429 | MS.gene73389:CDS |
| CTGATCATCCAAATGCATAT+TGG | 0.358385 | 7.2:+23450675 | MS.gene73389:CDS |
| AGAAAACTCTAGAGGTTGTT+TGG | 0.360019 | 7.2:+23449221 | MS.gene73389:CDS |
| CAATTTATCAAAGATGAGTT+TGG | 0.360039 | 7.2:+23448914 | MS.gene73389:CDS |
| TTTGCTGCCTCCACCATCTC+TGG | 0.360724 | 7.2:-23448474 | None:intergenic |
| GTCTTGGTGGACCGCTCAGT+TGG | 0.363453 | 7.2:+23455080 | MS.gene73389:CDS |
| AATATGCTAATTCATGGTTT+AGG | 0.365634 | 7.2:+23449997 | MS.gene73389:CDS |
| TAAAAGAACTCTACCTGAAT+AGG | 0.365941 | 7.2:-23449459 | None:intergenic |
| GTTTGGCCATTCTGCAGTTC+AGG | 0.369063 | 7.2:+23448970 | MS.gene73389:CDS |
| GTTAGAAGAGCGGTGTTGTT+TGG | 0.372444 | 7.2:-23455928 | None:intergenic |
| TTCGAGATTTCAGGACTGAT+TGG | 0.376321 | 7.2:+23454640 | MS.gene73389:CDS |
| GAGGACAGTAGCTTATATTA+AGG | 0.378777 | 7.2:-23451559 | None:intergenic |
| CTGCTGCAGGAACTGTTTGA+AGG | 0.383150 | 7.2:-23457540 | None:intergenic |
| ACAGATTGTGAGGATATATA+AGG | 0.393438 | 7.2:+23454232 | MS.gene73389:intron |
| CTGATTGATCAGACTACTCT+TGG | 0.394062 | 7.2:+23448887 | MS.gene73389:CDS |
| ACCTGCTGATCAGATTTAAT+GGG | 0.394847 | 7.2:-23453863 | None:intergenic |
| CAAGTTTATCTATGTTGAAA+TGG | 0.396778 | 7.2:+23448322 | MS.gene73389:CDS |
| AATGGAGATTCGGACATTCT+TGG | 0.400784 | 7.2:+23457504 | MS.gene73389:CDS |
| ATTTAGCACCCTCACCTATA+CGG | 0.405622 | 7.2:-23455704 | None:intergenic |
| AACTTGTTCCAATGGAGATT+CGG | 0.406586 | 7.2:+23457494 | MS.gene73389:CDS |
| ACCACTCTTACCTTCTTGTT+AGG | 0.407090 | 7.2:-23457251 | None:intergenic |
| TTTCAAGGGAGGAATGAATC+AGG | 0.407807 | 7.2:+23450897 | MS.gene73389:CDS |
| AACAATGAGTGGTTACTATC+AGG | 0.407898 | 7.2:+23450742 | MS.gene73389:CDS |
| TGGCAAGGTTCCAGGTCCCT+TGG | 0.410907 | 7.2:+23449241 | MS.gene73389:CDS |
| TAACCAGTCCAATATGCATT+TGG | 0.411552 | 7.2:-23450683 | None:intergenic |
| GTATAGGTGAGGGTGCTAAA+TGG | 0.417846 | 7.2:+23455706 | MS.gene73389:CDS |
| GGCTGGCAGATTGATCCGTT+TGG | 0.418749 | 7.2:+23448953 | MS.gene73389:CDS |
| CATGTGATAAACCCTGTAAC+AGG | 0.420690 | 7.2:+23451177 | MS.gene73389:CDS |
| ACAAACTCTAATGGAGTTGT+TGG | 0.420725 | 7.2:-23448155 | None:intergenic |
| ACCAGCTTTGTAGGATCAAC+TGG | 0.421591 | 7.2:-23457466 | None:intergenic |
| TCAATCTGCCAGCCAACTCT+TGG | 0.422596 | 7.2:-23448944 | None:intergenic |
| TTTGCATCAGTGTAGATAGA+TGG | 0.423252 | 7.2:-23450220 | None:intergenic |
| GTTTATTCACTATGTCAATC+AGG | 0.425293 | 7.2:+23450031 | MS.gene73389:CDS |
| TCAGAAGCTACCTTGGCTAA+TGG | 0.425782 | 7.2:+23451584 | MS.gene73389:CDS |
| TAATCAAGAAAGAGCTGAAA+TGG | 0.426949 | 7.2:+23457375 | MS.gene73389:CDS |
| TATTTAGGTAGCAAGGCAAT+TGG | 0.431073 | 7.2:+23450869 | MS.gene73389:intron |
| GACGGAGAAACAAACTCTAA+TGG | 0.431950 | 7.2:-23448164 | None:intergenic |
| TTAATCGTTTGGCTCTATCT+TGG | 0.432559 | 7.2:-23449195 | None:intergenic |
| TATTTGACCATCTACCAAAC+TGG | 0.432627 | 7.2:-23455108 | None:intergenic |
| ACAAGTAGGCCAGCTTTAAA+GGG | 0.433645 | 7.2:+23450710 | MS.gene73389:CDS |
| TCCCATTAAATCTGATCAGC+AGG | 0.434621 | 7.2:+23453862 | MS.gene73389:CDS |
| CGATATAGAACTCTCGGTCT+TGG | 0.435660 | 7.2:+23455064 | MS.gene73389:CDS |
| TCGAGATTTCAGGACTGATT+GGG | 0.436029 | 7.2:+23454641 | MS.gene73389:CDS |
| AGGCCATCATCCACAGGTAT+AGG | 0.440290 | 7.2:-23454401 | None:intergenic |
| AAGACTGGCTCACCTTTATG+AGG | 0.440774 | 7.2:+23456707 | MS.gene73389:CDS |
| CTTGGTGGACCGCTCAGTTG+GGG | 0.442323 | 7.2:+23455082 | MS.gene73389:CDS |
| TTCTGTGATATCATCACTCT+TGG | 0.442682 | 7.2:+23448286 | MS.gene73389:CDS |
| TGTGAGGATATATAAGGAAA+AGG | 0.447116 | 7.2:+23454238 | MS.gene73389:CDS |
| AAATAATTACAACCTCATAA+AGG | 0.448484 | 7.2:-23456719 | None:intergenic |
| AATCACATAATGTGGGCAAT+GGG | 0.449122 | 7.2:+23449957 | MS.gene73389:CDS |
| GCTGTTGGCTTTCACGGAGC+AGG | 0.451967 | 7.2:+23455764 | MS.gene73389:CDS |
| CTACTTTATTCCGCAGATGA+AGG | 0.452311 | 7.2:+23453014 | MS.gene73389:CDS |
| TGTATCTGCTGCCTTGGCTC+AGG | 0.455607 | 7.2:+23449612 | MS.gene73389:CDS |
| GCTCAATTCGTGGGTATCTC+AGG | 0.456024 | 7.2:+23454031 | MS.gene73389:CDS |
| TGACTTTGTATCTGCTGCCT+TGG | 0.457211 | 7.2:+23449606 | MS.gene73389:CDS |
| TGATGTACTTCATCCAATAT+CGG | 0.457448 | 7.2:-23454005 | None:intergenic |
| TTGTTTATAATCCTCTTGCT+TGG | 0.459312 | 7.2:+23451749 | MS.gene73389:CDS |
| GAAGTGAACCAACCCGTAGC+TGG | 0.459418 | 7.2:+23454669 | MS.gene73389:CDS |
| TCAGCTAACACGTCAGTGTT+TGG | 0.460097 | 7.2:-23450921 | None:intergenic |
| ACATTCTACACAGATTCTAA+TGG | 0.461165 | 7.2:+23454473 | MS.gene73389:CDS |
| ACTAATAATAGCATAGAAGT+TGG | 0.461610 | 7.2:+23452975 | MS.gene73389:CDS |
| ATCTCGAACGTGAATCCATC+AGG | 0.466466 | 7.2:-23449420 | None:intergenic |
| ATCTGTGTAGAATGTCTTGT+TGG | 0.467544 | 7.2:-23454465 | None:intergenic |
| GCAACGGTGAATATAATTCC+TGG | 0.467778 | 7.2:-23455743 | None:intergenic |
| ACCTGGTATTTCCAGATACA+AGG | 0.471130 | 7.2:+23455660 | MS.gene73389:intron |
| CTGCTGGGGACCTCAAGTAT+TGG | 0.471878 | 7.2:+23452542 | MS.gene73389:CDS |
| TTCCTTAGAATTGACCGTAT+AGG | 0.472302 | 7.2:+23455690 | MS.gene73389:CDS |
| TATTTACTGGGATATTTCCC+AGG | 0.474860 | 7.2:+23449385 | MS.gene73389:CDS |
| TAATTTGCAGGCAGAAGGCT+TGG | 0.477127 | 7.2:+23451110 | MS.gene73389:intron |
| CAAGAGTAGTCTGATCAATC+AGG | 0.477934 | 7.2:-23448886 | None:intergenic |
| GAACTCTACCTGAATAGGTT+GGG | 0.478148 | 7.2:-23449454 | None:intergenic |
| ATCAGGAGGATCATAATGCC+TGG | 0.478368 | 7.2:-23449403 | None:intergenic |
| TATGTAGGAACAGCCCCTGC+TGG | 0.480936 | 7.2:+23452526 | MS.gene73389:CDS |
| CAATCAGGTCAATGTAATGC+GGG | 0.481134 | 7.2:-23448871 | None:intergenic |
| TTAATGGGAAACGAGCCATT+TGG | 0.481967 | 7.2:-23453848 | None:intergenic |
| CTCAAAGTAATATTAGATAT+AGG | 0.489671 | 7.2:-23452478 | None:intergenic |
| TTTCCTTCCCAGAAGAGTCC+TGG | 0.490072 | 7.2:-23452438 | None:intergenic |
| ATTATATTCACCGTTGCTGT+TGG | 0.492362 | 7.2:+23455749 | MS.gene73389:CDS |
| ATACCTGTGGATGATGGCCT+TGG | 0.493634 | 7.2:+23454404 | MS.gene73389:CDS |
| CAGCACCATGATGCTGTTAG+TGG | 0.494009 | 7.2:+23450960 | MS.gene73389:CDS |
| TGCTGCAGGAACTGTTTGAA+GGG | 0.496123 | 7.2:-23457539 | None:intergenic |
| CCTCACTCTCATGATGATGT+TGG | 0.496579 | 7.2:+23448097 | MS.gene73389:CDS |
| ATAATCCTCTTGCTTGGACG+AGG | 0.496901 | 7.2:+23451755 | MS.gene73389:CDS |
| CTCACGTAACCCTTTAAAGC+TGG | 0.497153 | 7.2:-23450719 | None:intergenic |
| AAAGAAGAGATTAGTTTGGA+AGG | 0.497971 | 7.2:+23457399 | MS.gene73389:CDS |
| CCGGTATCTGTACCTCCCAT+TGG | 0.498659 | 7.2:+23452574 | MS.gene73389:CDS |
| GGGTAATAGTTTCCAGCTAC+GGG | 0.500717 | 7.2:-23454681 | None:intergenic |
| ATGTAGGAACAGCCCCTGCT+GGG | 0.502770 | 7.2:+23452527 | MS.gene73389:CDS |
| ATGGCGTCGTACACTTGGCC+AGG | 0.506930 | 7.2:+23455725 | MS.gene73389:CDS |
| CGGAAAAGTACTATTAAGAC+TGG | 0.508368 | 7.2:+23456692 | MS.gene73389:CDS |
| AAATAGAGCTGATGCTCCAC+AGG | 0.510798 | 7.2:+23455126 | MS.gene73389:CDS |
| TTCTTGATATTTAGGTAGCA+AGG | 0.511290 | 7.2:+23450862 | MS.gene73389:intron |
| ATGCACCTCGTCATAGCCTA+TGG | 0.512229 | 7.2:-23451027 | None:intergenic |
| AGAACTCTACCTGAATAGGT+TGG | 0.512423 | 7.2:-23449455 | None:intergenic |
| CATGATGATGTAAGAGGTGT+TGG | 0.512514 | 7.2:+23455304 | MS.gene73389:CDS |
| AAGAATGTCCGAATCTCCAT+TGG | 0.513779 | 7.2:-23457502 | None:intergenic |
| TGAAGAGTCTAAGGTGGTGA+GGG | 0.513966 | 7.2:+23457438 | MS.gene73389:CDS |
| TGTGATATCATCACTCTTGG+AGG | 0.514448 | 7.2:+23448289 | MS.gene73389:CDS |
| GCTAAATGGCGTCGTACACT+TGG | 0.514919 | 7.2:+23455720 | MS.gene73389:CDS |
| TGGGTAATAGTTTCCAGCTA+CGG | 0.515329 | 7.2:-23454682 | None:intergenic |
| TATAGAACTCTCGGTCTTGG+TGG | 0.519296 | 7.2:+23455067 | MS.gene73389:CDS |
| AGTATCAAGTCGTAAGCATA+CGG | 0.519696 | 7.2:+23452612 | MS.gene73389:CDS |
| ACTCTAGAGGTTGTTTGGCA+AGG | 0.521960 | 7.2:+23449226 | MS.gene73389:CDS |
| AGTCAAAGATCTTGTCAACT+CGG | 0.525179 | 7.2:+23448516 | MS.gene73389:CDS |
| ACTCTCATGATGATGTTGGT+TGG | 0.525408 | 7.2:+23448101 | MS.gene73389:CDS |
| CCAATGGGAGGTACAGATAC+CGG | 0.526896 | 7.2:-23452574 | None:intergenic |
| CTTCATTTCAGATATTTACT+GGG | 0.527545 | 7.2:+23449373 | MS.gene73389:intron |
| TTTCTTAATTTGCAGGCAGA+AGG | 0.528909 | 7.2:+23451105 | MS.gene73389:intron |
| GCATACGTCTTCCGTCCAAA+TGG | 0.530662 | 7.2:+23453833 | MS.gene73389:CDS |
| CCCTGTAACAGGCTTCCAGC+AGG | 0.531458 | 7.2:+23451188 | MS.gene73389:CDS |
| ACCAGTTGATCCTACAAAGC+TGG | 0.532090 | 7.2:+23457465 | MS.gene73389:CDS |
| CAATACTTGAGGTCCCCAGC+AGG | 0.532366 | 7.2:-23452541 | None:intergenic |
| TTCTTCTTGTACAGATTGTG+AGG | 0.533573 | 7.2:+23454222 | MS.gene73389:intron |
| TAATTCATGGTTTAGGCAGA+TGG | 0.534719 | 7.2:+23450004 | MS.gene73389:CDS |
| CACCGCTCTTCTAACTCTGC+AGG | 0.536765 | 7.2:+23455936 | MS.gene73389:CDS |
| ACATAGGTGCTGAAACCAAT+GGG | 0.537404 | 7.2:-23452589 | None:intergenic |
| AAATATGTCAAAGCATATGT+AGG | 0.537444 | 7.2:+23452511 | MS.gene73389:CDS |
| CCACATTATGTGATTCGTCC+TGG | 0.539153 | 7.2:-23449949 | None:intergenic |
| TTGCCAAGGCCATCATCCAC+AGG | 0.540002 | 7.2:-23454407 | None:intergenic |
| GTCAAAGATCTTGTCAACTC+GGG | 0.540144 | 7.2:+23448517 | MS.gene73389:CDS |
| GGGCCTATACCTGTGGATGA+TGG | 0.540711 | 7.2:+23454398 | MS.gene73389:CDS |
| CATCCAAATGCATATTGGAC+TGG | 0.541163 | 7.2:+23450680 | MS.gene73389:CDS |
| ACATTTATCAGCAATGCAAA+CGG | 0.541893 | 7.2:-23455344 | None:intergenic |
| AGATAAAATAAACGTGCACT+TGG | 0.542140 | 7.2:+23448072 | MS.gene73389:CDS |
| TGAAGAAGAACCAAGGGACC+TGG | 0.542740 | 7.2:-23449251 | None:intergenic |
| TGTCCAGGACTCTTCTGGGA+AGG | 0.542814 | 7.2:+23452435 | MS.gene73389:CDS |
| ACAAAGCACAGCCACTAAAA+CGG | 0.545979 | 7.2:-23447999 | None:intergenic |
| TCCTCCGTCAGAAGCTACCT+TGG | 0.546594 | 7.2:+23451577 | MS.gene73389:CDS |
| GAATCACATAATGTGGGCAA+TGG | 0.546667 | 7.2:+23449956 | MS.gene73389:CDS |
| TTTGGTAAGATTCCAAGAGT+TGG | 0.547022 | 7.2:+23448932 | MS.gene73389:CDS |
| GTAAGATTCCAAGAGTTGGC+TGG | 0.547281 | 7.2:+23448936 | MS.gene73389:CDS |
| GGTTGTTGAACTTGTTCCAA+TGG | 0.548030 | 7.2:+23457486 | MS.gene73389:CDS |
| CACCACCTTAGACTCTTCAC+TGG | 0.548230 | 7.2:-23457434 | None:intergenic |
| TATGCAAAGCGGATTTCCAT+AGG | 0.551980 | 7.2:+23451011 | MS.gene73389:CDS |
| AGGCATTATGATCCTCCTGA+TGG | 0.552489 | 7.2:+23449405 | MS.gene73389:CDS |
| TGGACGCGACTTCATTAAAA+GGG | 0.554065 | 7.2:+23454493 | MS.gene73389:CDS |
| ATACTTGAGGTCCCCAGCAG+GGG | 0.555820 | 7.2:-23452539 | None:intergenic |
| TACATCAACAGCTCAATTCG+TGG | 0.556275 | 7.2:+23454021 | MS.gene73389:CDS |
| TGATTGATCAGACTACTCTT+GGG | 0.560165 | 7.2:+23448888 | MS.gene73389:CDS |
| TAATCCTCTTGCTTGGACGA+GGG | 0.560961 | 7.2:+23451756 | MS.gene73389:CDS |
| AATACTTGAGGTCCCCAGCA+GGG | 0.563201 | 7.2:-23452540 | None:intergenic |
| GGCTTACTTACTTGGAGCTG+AGG | 0.563211 | 7.2:+23448991 | MS.gene73389:CDS |
| CCTGCTGGAAGCCTGTTACA+GGG | 0.563293 | 7.2:-23451188 | None:intergenic |
| AGATAGCGATATAGAACTCT+CGG | 0.564919 | 7.2:+23455058 | MS.gene73389:CDS |
| ACCAGGCCTCACCTGAGCCA+AGG | 0.567720 | 7.2:-23449623 | None:intergenic |
| CTGTGCCACTAACAGCATCA+TGG | 0.569031 | 7.2:-23450965 | None:intergenic |
| GAGTAATAACTTCTTTGCCA+AGG | 0.569342 | 7.2:-23454421 | None:intergenic |
| CTTACGACTTGATACTACAT+AGG | 0.571591 | 7.2:-23452605 | None:intergenic |
| TGGGGATAATAAAGATTCCC+AGG | 0.573380 | 7.2:+23453287 | MS.gene73389:CDS |
| CCAGGACGAATCACATAATG+TGG | 0.574825 | 7.2:+23449949 | MS.gene73389:CDS |
| TCCTCCCTCGTCCAAGCAAG+AGG | 0.575053 | 7.2:-23451760 | None:intergenic |
| ATGCTTCATGATGATGTAAG+AGG | 0.581510 | 7.2:+23455298 | MS.gene73389:CDS |
| AATAGTTTCCAGCTACGGGT+TGG | 0.584416 | 7.2:-23454677 | None:intergenic |
| GGTGTTGTTTGGTAAACTGT+AGG | 0.586286 | 7.2:-23455917 | None:intergenic |
| TGAACTGCAGAATGGCCAAA+CGG | 0.588119 | 7.2:-23448968 | None:intergenic |
| GTTTCTAGGCTAATGTGACC+AGG | 0.588358 | 7.2:+23449931 | MS.gene73389:intron |
| TTGGTGGACCGCTCAGTTGG+GGG | 0.588993 | 7.2:+23455083 | MS.gene73389:CDS |
| TCATATTTCAATTATCTCAA+CGG | 0.590231 | 7.2:+23452932 | MS.gene73389:CDS |
| TGGACGGAAGACGTATGCCC+CGG | 0.590238 | 7.2:-23453828 | None:intergenic |
| GCTGCAGGAACTGTTTGAAG+GGG | 0.591936 | 7.2:-23457538 | None:intergenic |
| TACATAGGTGCTGAAACCAA+TGG | 0.592627 | 7.2:-23452590 | None:intergenic |
| TCAACGGAGTTCAGATCAGA+AGG | 0.595112 | 7.2:+23452948 | MS.gene73389:CDS |
| CACAGTGATGATGATCAATA+CGG | 0.600911 | 7.2:+23447964 | None:intergenic |
| TCAGGAGGATCATAATGCCT+GGG | 0.602840 | 7.2:-23449402 | None:intergenic |
| TGCATTGCTGATAAATGTGA+AGG | 0.602938 | 7.2:+23455349 | MS.gene73389:CDS |
| GTGAAGAGTCTAAGGTGGTG+AGG | 0.606014 | 7.2:+23457437 | MS.gene73389:CDS |
| ATGAATTAGCATATTGATAG+CGG | 0.606108 | 7.2:-23449989 | None:intergenic |
| AGTAAGCCTGAACTGCAGAA+TGG | 0.616488 | 7.2:-23448976 | None:intergenic |
| AGTAGCTTATATTAAGGAGA+GGG | 0.617083 | 7.2:-23451553 | None:intergenic |
| TTAGTTTGGAAGGTAGAAGG+AGG | 0.619123 | 7.2:+23457409 | MS.gene73389:CDS |
| TCCTCTTGCTTGGACGAGGG+AGG | 0.619804 | 7.2:+23451759 | MS.gene73389:CDS |
| AGAATTGACCGTATAGGTGA+GGG | 0.620881 | 7.2:+23455696 | MS.gene73389:CDS |
| TAGAATTGACCGTATAGGTG+AGG | 0.622322 | 7.2:+23455695 | MS.gene73389:CDS |
| ATAGATTGGGCCTATACCTG+TGG | 0.623623 | 7.2:+23454391 | MS.gene73389:intron |
| GAGTCTAAGGTGGTGAGGGG+AGG | 0.623763 | 7.2:+23457442 | MS.gene73389:CDS |
| GCCAAGGTAGCTTCTGACGG+AGG | 0.624916 | 7.2:-23451578 | None:intergenic |
| TCCGTGAAAGCCAACAGCAA+CGG | 0.625680 | 7.2:-23455759 | None:intergenic |
| TGTAGGAACAGCCCCTGCTG+GGG | 0.627495 | 7.2:+23452528 | MS.gene73389:CDS |
| ACATCAACAGCTCAATTCGT+GGG | 0.627777 | 7.2:+23454022 | MS.gene73389:CDS |
| GTATCAAGTCGTAAGCATAC+GGG | 0.629566 | 7.2:+23452613 | MS.gene73389:CDS |
| TTAGCCAAGGTAGCTTCTGA+CGG | 0.631493 | 7.2:-23451581 | None:intergenic |
| TACTTGTGAAGAAGAACCAA+GGG | 0.636369 | 7.2:-23449257 | None:intergenic |
| ATTAAAGGAGAAAACTCTAG+AGG | 0.636570 | 7.2:+23449213 | MS.gene73389:CDS |
| TGGGAAACGAGCCATTTGGA+CGG | 0.639577 | 7.2:-23453844 | None:intergenic |
| GAGTCTATGCCAGAAAATGT+TGG | 0.639708 | 7.2:-23455892 | None:intergenic |
| CAGTAGCTTATATTAAGGAG+AGG | 0.640047 | 7.2:-23451554 | None:intergenic |
| ACCGTTGATCAGTACTACGT+TGG | 0.642186 | 7.2:+23448130 | MS.gene73389:CDS |
| GAAATGCAAGCCAATACTTG+AGG | 0.645892 | 7.2:-23452552 | None:intergenic |
| GAAGAGTCTAAGGTGGTGAG+GGG | 0.652985 | 7.2:+23457439 | MS.gene73389:CDS |
| TCAATCAGGTCAATGTAATG+CGG | 0.655563 | 7.2:-23448872 | None:intergenic |
| CCAACATCATCATGAGAGTG+AGG | 0.655998 | 7.2:-23448097 | None:intergenic |
| ACTACATGTAAAGGTTGGAG+AGG | 0.656333 | 7.2:+23457181 | MS.gene73389:intron |
| CATCCAATATCGGACCGCGC+AGG | 0.657281 | 7.2:-23453995 | None:intergenic |
| AATATGCAGCTAATGAGCAG+TGG | 0.661561 | 7.2:+23450242 | MS.gene73389:CDS |
| TTACTTGTGAAGAAGAACCA+AGG | 0.666220 | 7.2:-23449258 | None:intergenic |
| ATCACATAATGTGGGCAATG+GGG | 0.676792 | 7.2:+23449958 | MS.gene73389:CDS |
| AATAGCATAGAAGTTGGACA+AGG | 0.679887 | 7.2:+23452981 | MS.gene73389:CDS |
| TCCAACGTAGTACTGATCAA+CGG | 0.683225 | 7.2:-23448131 | None:intergenic |
| CTCCAGTGAAGAGTCTAAGG+TGG | 0.687062 | 7.2:+23457432 | MS.gene73389:CDS |
| CAGGACGAATCACATAATGT+GGG | 0.687103 | 7.2:+23449950 | MS.gene73389:CDS |
| CAGGTCAATGTAATGCGGGG+TGG | 0.688828 | 7.2:-23448867 | None:intergenic |
| ATAGCATAGAAGTTGGACAA+GGG | 0.691079 | 7.2:+23452982 | MS.gene73389:CDS |
| AATCAGGTCAATGTAATGCG+GGG | 0.692814 | 7.2:-23448870 | None:intergenic |
| GGTTACGTGAGAACAATGAG+TGG | 0.698149 | 7.2:+23450731 | MS.gene73389:CDS |
| TCGAACGTGAATCCATCAGG+AGG | 0.700399 | 7.2:-23449417 | None:intergenic |
| TACCTGCAGAGTTAGAAGAG+CGG | 0.704633 | 7.2:-23455938 | None:intergenic |
| TGGTATGTGCATGCATGACG+AGG | 0.712035 | 7.2:+23448844 | MS.gene73389:CDS |
| TAGCTGCTGATTATGCAAAG+CGG | 0.723096 | 7.2:+23451000 | MS.gene73389:CDS |
| GATTTCCATAGGCTATGACG+AGG | 0.742371 | 7.2:+23451022 | MS.gene73389:CDS |
| TAGGTGCTGAAACCAATGGG+AGG | 0.751093 | 7.2:-23452586 | None:intergenic |
| TAGAATACAACATCACACAG+AGG | 0.780508 | 7.2:+23448041 | MS.gene73389:CDS |
| AGTGATGATGATCAATACGG+TGG | 0.815070 | 7.2:+23447967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 23447971 | 23457582 | 23447971 | ID=MS.gene73389 |
| chr7.2 | mRNA | 23447971 | 23457582 | 23447971 | ID=MS.gene73389.t1;Parent=MS.gene73389 |
| chr7.2 | exon | 23447971 | 23448171 | 23447971 | ID=MS.gene73389.t1.exon1;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23447971 | 23448171 | 23447971 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23448260 | 23448343 | 23448260 | ID=MS.gene73389.t1.exon2;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23448260 | 23448343 | 23448260 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23448466 | 23448554 | 23448466 | ID=MS.gene73389.t1.exon3;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23448466 | 23448554 | 23448466 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23448838 | 23449012 | 23448838 | ID=MS.gene73389.t1.exon4;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23448838 | 23449012 | 23448838 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23449157 | 23449276 | 23449157 | ID=MS.gene73389.t1.exon5;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23449157 | 23449276 | 23449157 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23449384 | 23449467 | 23449384 | ID=MS.gene73389.t1.exon6;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23449384 | 23449467 | 23449384 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23449562 | 23449633 | 23449562 | ID=MS.gene73389.t1.exon7;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23449562 | 23449633 | 23449562 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23449939 | 23450052 | 23449939 | ID=MS.gene73389.t1.exon8;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23449939 | 23450052 | 23449939 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23450190 | 23450290 | 23450190 | ID=MS.gene73389.t1.exon9;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23450190 | 23450290 | 23450190 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23450670 | 23450763 | 23450670 | ID=MS.gene73389.t1.exon10;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23450670 | 23450763 | 23450670 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23450876 | 23451043 | 23450876 | ID=MS.gene73389.t1.exon11;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23450876 | 23451043 | 23450876 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23451120 | 23451209 | 23451120 | ID=MS.gene73389.t1.exon12;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23451120 | 23451209 | 23451120 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23451551 | 23451616 | 23451551 | ID=MS.gene73389.t1.exon13;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23451551 | 23451616 | 23451551 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23451742 | 23451798 | 23451742 | ID=MS.gene73389.t1.exon14;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23451742 | 23451798 | 23451742 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23452415 | 23452634 | 23452415 | ID=MS.gene73389.t1.exon15;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23452415 | 23452634 | 23452415 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23452931 | 23453070 | 23452931 | ID=MS.gene73389.t1.exon16;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23452931 | 23453070 | 23452931 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23453240 | 23453308 | 23453240 | ID=MS.gene73389.t1.exon17;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23453240 | 23453308 | 23453240 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23453824 | 23453883 | 23453824 | ID=MS.gene73389.t1.exon18;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23453824 | 23453883 | 23453824 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23453981 | 23454052 | 23453981 | ID=MS.gene73389.t1.exon19;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23453981 | 23454052 | 23453981 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23454236 | 23454283 | 23454236 | ID=MS.gene73389.t1.exon20;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23454236 | 23454283 | 23454236 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23454395 | 23454514 | 23454395 | ID=MS.gene73389.t1.exon21;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23454395 | 23454514 | 23454395 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23454639 | 23454704 | 23454639 | ID=MS.gene73389.t1.exon22;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23454639 | 23454704 | 23454639 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23455035 | 23455147 | 23455035 | ID=MS.gene73389.t1.exon23;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23455035 | 23455147 | 23455035 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23455294 | 23455378 | 23455294 | ID=MS.gene73389.t1.exon24;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23455294 | 23455378 | 23455294 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23455675 | 23455785 | 23455675 | ID=MS.gene73389.t1.exon25;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23455675 | 23455785 | 23455675 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23455862 | 23455957 | 23455862 | ID=MS.gene73389.t1.exon26;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23455862 | 23455957 | 23455862 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23456681 | 23456728 | 23456681 | ID=MS.gene73389.t1.exon27;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23456681 | 23456728 | 23456681 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23457194 | 23457262 | 23457194 | ID=MS.gene73389.t1.exon28;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23457194 | 23457262 | 23457194 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| chr7.2 | exon | 23457343 | 23457582 | 23457343 | ID=MS.gene73389.t1.exon29;Parent=MS.gene73389.t1 |
| chr7.2 | CDS | 23457343 | 23457582 | 23457343 | ID=cds.MS.gene73389.t1;Parent=MS.gene73389.t1 |
| Gene Sequence |
| Protein sequence |
