Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051859.t1 | XP_013458478.1 | 78.7 | 258 | 55 | 0 | 6 | 263 | 9 | 266 | 8.20E-107 | 396.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051859.t1 | A0A072URS5 | 78.7 | 258 | 55 | 0 | 6 | 263 | 9 | 266 | 5.9e-107 | 396.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050559 | MS.gene051859 | 0.830131 | 3.49E-55 | -1.69E-46 |
| MS.gene050561 | MS.gene051859 | 0.834413 | 3.04E-56 | -1.69E-46 |
| MS.gene050562 | MS.gene051859 | 0.830237 | 3.29E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene051859 | 0.826028 | 3.40E-54 | -1.69E-46 |
| MS.gene051859 | MS.gene053998 | 0.800001 | 1.77E-48 | -1.69E-46 |
| MS.gene051859 | MS.gene056506 | 0.807228 | 5.60E-50 | -1.69E-46 |
| MS.gene051859 | MS.gene063491 | 0.817176 | 3.78E-52 | -1.69E-46 |
| MS.gene051859 | MS.gene06723 | 0.803433 | 3.49E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene06940 | 0.80893 | 2.43E-50 | -1.69E-46 |
| MS.gene051859 | MS.gene08589 | 0.828142 | 1.06E-54 | -1.69E-46 |
| MS.gene051859 | MS.gene27971 | 0.824486 | 7.86E-54 | -1.69E-46 |
| MS.gene051859 | MS.gene27972 | 0.823507 | 1.33E-53 | -1.69E-46 |
| MS.gene051859 | MS.gene28650 | 0.804852 | 1.77E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene29022 | 0.815457 | 9.16E-52 | -1.69E-46 |
| MS.gene051859 | MS.gene31283 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene051859 | MS.gene34287 | 0.800528 | 1.38E-48 | -1.69E-46 |
| MS.gene051859 | MS.gene36284 | 0.823666 | 1.23E-53 | -1.69E-46 |
| MS.gene051859 | MS.gene45422 | 0.80307 | 4.15E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene49633 | 0.84178 | 3.86E-58 | -1.69E-46 |
| MS.gene051859 | MS.gene52134 | 0.805588 | 1.24E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene53476 | 0.802137 | 6.47E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene57567 | 0.937093 | 6.06E-98 | -1.69E-46 |
| MS.gene051859 | MS.gene57644 | 0.965979 | 2.60E-125 | -1.69E-46 |
| MS.gene051859 | MS.gene59336 | 0.831931 | 1.26E-55 | -1.69E-46 |
| MS.gene051859 | MS.gene62247 | 0.804027 | 2.63E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene63030 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene051859 | MS.gene66076 | 0.826563 | 2.53E-54 | -1.69E-46 |
| MS.gene051859 | MS.gene72400 | 0.818535 | 1.86E-52 | -1.69E-46 |
| MS.gene051859 | MS.gene73389 | 0.830239 | 3.28E-55 | -1.69E-46 |
| MS.gene051859 | MS.gene84454 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene86122 | 0.843869 | 1.07E-58 | -1.69E-46 |
| MS.gene051859 | MS.gene89099 | 0.827111 | 1.87E-54 | -1.69E-46 |
| MS.gene051859 | MS.gene92383 | 0.801312 | 9.56E-49 | -1.69E-46 |
| MS.gene051859 | MS.gene93041 | 0.825419 | 4.74E-54 | -1.69E-46 |
| MS.gene051859 | MS.gene97490 | 0.817852 | 2.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051859.t1 | MTR_4g126120 | 93.822 | 259 | 16 | 0 | 5 | 263 | 17 | 275 | 0.0 | 504 |
| MS.gene051859.t1 | MTR_4g126120 | 94.186 | 258 | 15 | 0 | 6 | 263 | 9 | 266 | 0.0 | 503 |
| MS.gene051859.t1 | MTR_2g039510 | 67.331 | 251 | 79 | 1 | 10 | 257 | 14 | 264 | 1.55e-127 | 363 |
| MS.gene051859.t1 | MTR_4g126050 | 66.667 | 252 | 83 | 1 | 6 | 257 | 65 | 315 | 3.63e-127 | 364 |
| MS.gene051859.t1 | MTR_2g039570 | 65.759 | 257 | 86 | 2 | 4 | 258 | 1 | 257 | 2.04e-126 | 360 |
| MS.gene051859.t1 | MTR_2g039480 | 63.636 | 253 | 89 | 1 | 8 | 257 | 8 | 260 | 3.38e-118 | 339 |
| MS.gene051859.t1 | MTR_2g039450 | 57.143 | 252 | 107 | 1 | 8 | 258 | 12 | 263 | 5.95e-102 | 299 |
| MS.gene051859.t1 | MTR_1g016050 | 56.225 | 249 | 109 | 0 | 7 | 255 | 5 | 253 | 6.72e-102 | 298 |
| MS.gene051859.t1 | MTR_4g126050 | 63.793 | 174 | 62 | 1 | 5 | 178 | 64 | 236 | 2.56e-81 | 244 |
| MS.gene051859.t1 | MTR_1g016060 | 40.462 | 173 | 82 | 2 | 84 | 255 | 467 | 619 | 1.08e-30 | 120 |
| MS.gene051859.t1 | MTR_4g124530 | 81.579 | 38 | 7 | 0 | 126 | 163 | 29 | 66 | 3.86e-16 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051859.t1 | AT3G47590 | 60.385 | 260 | 101 | 1 | 1 | 260 | 50 | 307 | 9.37e-116 | 334 |
| MS.gene051859.t1 | AT1G29840 | 59.922 | 257 | 101 | 1 | 4 | 260 | 56 | 310 | 1.66e-111 | 324 |
| MS.gene051859.t1 | AT3G47560 | 60.729 | 247 | 95 | 1 | 9 | 255 | 9 | 253 | 6.12e-108 | 313 |
| MS.gene051859.t1 | AT3G47560 | 60.729 | 247 | 95 | 1 | 9 | 255 | 45 | 289 | 1.52e-107 | 313 |
| MS.gene051859.t1 | AT3G47560 | 55.351 | 271 | 97 | 1 | 9 | 255 | 9 | 279 | 3.29e-104 | 305 |
| MS.gene051859.t1 | AT3G47560 | 54.745 | 274 | 95 | 2 | 9 | 255 | 9 | 280 | 1.25e-101 | 298 |
| MS.gene051859.t1 | AT5G11910 | 53.785 | 251 | 116 | 0 | 5 | 255 | 17 | 267 | 1.23e-98 | 290 |
| MS.gene051859.t1 | AT5G11910 | 53.785 | 251 | 116 | 0 | 5 | 255 | 35 | 285 | 1.43e-98 | 291 |
| MS.gene051859.t1 | AT3G47560 | 50.336 | 298 | 97 | 2 | 9 | 255 | 9 | 306 | 7.10e-98 | 289 |
| MS.gene051859.t1 | AT2G19550 | 53.543 | 254 | 109 | 5 | 7 | 255 | 1 | 250 | 3.76e-91 | 273 |
| MS.gene051859.t1 | AT3G47590 | 60.976 | 164 | 64 | 0 | 1 | 164 | 50 | 213 | 1.43e-72 | 222 |
| MS.gene051859.t1 | AT5G11910 | 56.944 | 144 | 62 | 0 | 5 | 148 | 35 | 178 | 2.57e-56 | 179 |
| MS.gene051859.t1 | AT5G11910 | 56.944 | 144 | 62 | 0 | 5 | 148 | 17 | 160 | 2.64e-56 | 178 |
Find 56 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAAAGGGACAAGTTTA+AGG | 0.179174 | 8.2:-6469472 | None:intergenic |
| AGTGAAGGTTCATTTGAATT+TGG | 0.199714 | 8.2:-6471783 | MS.gene051859:CDS |
| CGCTTTGACTTCACTGGAAA+TGG | 0.200683 | 8.2:-6472104 | MS.gene051859:CDS |
| CGTAGAGTTATGGCAATTAT+TGG | 0.216683 | 8.2:-6471699 | MS.gene051859:CDS |
| CATTTGAATTTGGCAACTAT+TGG | 0.312331 | 8.2:-6471773 | MS.gene051859:CDS |
| ATCATAATACCCAACAAGTA+TGG | 0.316741 | 8.2:-6472408 | MS.gene051859:CDS |
| GCATAGGATAACAATCTCTT+TGG | 0.339030 | 8.2:+6472350 | None:intergenic |
| GACAGGTTCCTTACTGTTCA+TGG | 0.397774 | 8.2:-6469649 | MS.gene051859:intron |
| GTAGAGTTATGGCAATTATT+GGG | 0.428640 | 8.2:-6471698 | MS.gene051859:CDS |
| AGTTTATTTCCATACTTGTT+GGG | 0.428920 | 8.2:+6472399 | None:intergenic |
| TCTTTCCGCTTTGACTTCAC+TGG | 0.437314 | 8.2:-6472110 | MS.gene051859:CDS |
| TAGTTTATTTCCATACTTGT+TGG | 0.440588 | 8.2:+6472398 | None:intergenic |
| AACTCAAGTGCGTCTCCAAC+GGG | 0.443167 | 8.2:+6469607 | None:intergenic |
| TGTTTCCAAGACGATCTTCA+AGG | 0.446327 | 8.2:+6470850 | None:intergenic |
| AAAACAGTTGCCAACCTCTC+TGG | 0.452508 | 8.2:-6470894 | MS.gene051859:CDS |
| TGCATTCTTTGTCAATCTGC+AGG | 0.457468 | 8.2:+6470267 | None:intergenic |
| ACGATATGTAACTTGTGATT+CGG | 0.464998 | 8.2:+6469571 | None:intergenic |
| TGAAGCAAACCGTAGAGTTA+TGG | 0.474267 | 8.2:-6471709 | MS.gene051859:CDS |
| GCTTTGACTTCACTGGAAAT+GGG | 0.474450 | 8.2:-6472103 | MS.gene051859:intron |
| CTCTGGTCGCTATGATCTAA+AGG | 0.480670 | 8.2:-6470877 | MS.gene051859:CDS |
| TTGAATTTGGCAACTATTGG+AGG | 0.482147 | 8.2:-6471770 | MS.gene051859:CDS |
| ATTGAGTTGAAGACTAAGTC+AGG | 0.483398 | 8.2:-6470795 | MS.gene051859:intron |
| AAGTATGGAAATAAACTAGT+AGG | 0.483546 | 8.2:-6472393 | MS.gene051859:CDS |
| GCAATTATTGGGCACAGTAA+AGG | 0.484866 | 8.2:-6471687 | MS.gene051859:intron |
| TTGGAGAGAATCAGAAAGGA+AGG | 0.500613 | 8.2:-6470822 | MS.gene051859:CDS |
| CATAACCGAGGAAAGCTTGA+AGG | 0.507061 | 8.2:-6470321 | MS.gene051859:CDS |
| CAATAATTGCCATAACTCTA+CGG | 0.510312 | 8.2:+6471700 | None:intergenic |
| CATTTCATGGGACCAATCAC+AGG | 0.517417 | 8.2:-6475630 | None:intergenic |
| ATCATAGCGACCAGAGAGGT+TGG | 0.518319 | 8.2:+6470884 | None:intergenic |
| GTAGGCAAATTACATGAAGC+TGG | 0.523470 | 8.2:-6472375 | MS.gene051859:CDS |
| TCGATCCTTCAAGCTTTCCT+CGG | 0.523491 | 8.2:+6470316 | None:intergenic |
| ATCAGAGAAACTAACCTTGG+AGG | 0.532587 | 8.2:+6472314 | None:intergenic |
| CCACGGTCTTCGAGCCTCCA+AGG | 0.543850 | 8.2:-6472328 | MS.gene051859:intron |
| CTAAATGCTCAGTATATACA+TGG | 0.545107 | 8.2:+6469536 | None:intergenic |
| GCAGGCCTTGAAGATCGTCT+TGG | 0.551855 | 8.2:-6470855 | MS.gene051859:CDS |
| AGCTGAGTTAGCTTCAATTG+TGG | 0.563562 | 8.2:-6469515 | MS.gene051859:CDS |
| GAACTCAAGTGCGTCTCCAA+CGG | 0.564779 | 8.2:+6469606 | None:intergenic |
| TGAATTTGGCAACTATTGGA+GGG | 0.566972 | 8.2:-6471769 | MS.gene051859:CDS |
| AGGCTCGAAGACCGTGGCAT+AGG | 0.574101 | 8.2:+6472334 | None:intergenic |
| CACAAGTTACATATCGTCAA+AGG | 0.581698 | 8.2:-6469565 | MS.gene051859:CDS |
| CCGCGTCACCATGAACAGTA+AGG | 0.586789 | 8.2:+6469641 | None:intergenic |
| GGTCGCTATGATCTAAAGGC+AGG | 0.588996 | 8.2:-6470873 | MS.gene051859:CDS |
| GCTGCTGCTCTAGATAATGC+AGG | 0.589211 | 8.2:-6472140 | MS.gene051859:CDS |
| TTCTCTTCCAGGGAAAGTGA+AGG | 0.589843 | 8.2:-6471798 | MS.gene051859:intron |
| TGGAGAGAATCAGAAAGGAA+GGG | 0.590267 | 8.2:-6470821 | MS.gene051859:CDS |
| TGCAGATTGACAAAGAATGC+AGG | 0.592169 | 8.2:-6470265 | MS.gene051859:intron |
| TATGTAACTTGTGATTCGGT+AGG | 0.596450 | 8.2:+6469575 | None:intergenic |
| CCTTACTGTTCATGGTGACG+CGG | 0.622022 | 8.2:-6469641 | MS.gene051859:CDS |
| TCTTGAGGCAGGAGCTAATG+TGG | 0.631493 | 8.2:-6470949 | MS.gene051859:intron |
| GAGATTGTTATCCTATGCCA+CGG | 0.643213 | 8.2:-6472345 | MS.gene051859:CDS |
| GCGGACACAATAATTCCCGT+TGG | 0.651618 | 8.2:-6469622 | MS.gene051859:CDS |
| ATTTGGCAACTATTGGAGGG+AGG | 0.660334 | 8.2:-6471766 | MS.gene051859:CDS |
| CCTTGGAGGCTCGAAGACCG+TGG | 0.673058 | 8.2:+6472328 | None:intergenic |
| CATTTCCAGTGAAGTCAAAG+CGG | 0.692758 | 8.2:+6472105 | None:intergenic |
| TGTTGATTATCGCATAACCG+AGG | 0.726198 | 8.2:-6470333 | MS.gene051859:CDS |
| TTAGATCATAGCGACCAGAG+AGG | 0.760661 | 8.2:+6470880 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAGTTATAACTTATA+TGG | + | chr8.2:6474417-6474436 | None:intergenic | 10.0% |
| !!! | AAAAATTCAATATTTTTTTC+AGG | - | chr8.2:6470962-6470981 | MS.gene051859:intron | 10.0% |
| !!! | AACTATTTTCTTAAAAAATT+TGG | - | chr8.2:6474543-6474562 | MS.gene051859:intron | 10.0% |
| !!! | AATATCTAACATTTTTAAAT+TGG | + | chr8.2:6471303-6471322 | None:intergenic | 10.0% |
| !!! | AGTTATGATAATTTTTTTAA+TGG | - | chr8.2:6475370-6475389 | MS.gene051859:intron | 10.0% |
| !!! | TGTTTTTTAAAAAAAAGAAA+CGG | - | chr8.2:6470646-6470665 | MS.gene051859:intron | 10.0% |
| !!! | TTTTTTGTAAATGATTAAAT+TGG | + | chr8.2:6471194-6471213 | None:intergenic | 10.0% |
| !!! | TTTTTTTATACAAGAAAATA+AGG | - | chr8.2:6469681-6469700 | MS.gene051859:intron | 10.0% |
| !! | AATAAATAAATACTGAGAAA+AGG | + | chr8.2:6471385-6471404 | None:intergenic | 15.0% |
| !! | AATAGAAAATTTACAACAAA+TGG | - | chr8.2:6473160-6473179 | MS.gene051859:intron | 15.0% |
| !! | ATAGAAAATTTACAACAAAT+GGG | - | chr8.2:6473161-6473180 | MS.gene051859:intron | 15.0% |
| !! | GATATTATTTAATGAAGTTA+TGG | - | chr8.2:6475398-6475417 | MS.gene051859:intron | 15.0% |
| !! | TTGTAATTATCTAATACATA+CGG | + | chr8.2:6472326-6472345 | None:intergenic | 15.0% |
| !!! | AAAGATGTTTTTGAAAAATA+TGG | - | chr8.2:6472507-6472526 | MS.gene051859:intron | 15.0% |
| !!! | ACATATTTTTATTTGTGAAA+TGG | + | chr8.2:6470407-6470426 | None:intergenic | 15.0% |
| !!! | ATTGAATTTTTTTTATATGC+AGG | + | chr8.2:6471054-6471073 | None:intergenic | 15.0% |
| !!! | GTTTTTAATATTCATAAGTA+TGG | + | chr8.2:6473503-6473522 | None:intergenic | 15.0% |
| !!! | TATATATTTTATGCAAAACT+CGG | - | chr8.2:6473064-6473083 | MS.gene051859:intron | 15.0% |
| !!! | TTGAATTTTTTTTATATGCA+GGG | + | chr8.2:6471053-6471072 | None:intergenic | 15.0% |
| !!! | TTTTAGATTCATTTAATGAA+GGG | + | chr8.2:6470749-6470768 | None:intergenic | 15.0% |
| !!! | TTTTTAGATTCATTTAATGA+AGG | + | chr8.2:6470750-6470769 | None:intergenic | 15.0% |
| !! | AATAATCATTACTTATGACA+AGG | - | chr8.2:6470576-6470595 | MS.gene051859:intron | 20.0% |
| !! | AATGATTCAGATTTGAATTA+AGG | - | chr8.2:6469810-6469829 | MS.gene051859:intron | 20.0% |
| !! | AGAAGAAAATAGATTTATAG+AGG | + | chr8.2:6475005-6475024 | None:intergenic | 20.0% |
| !! | ATAGTGAAATATAATGAACT+TGG | + | chr8.2:6473854-6473873 | None:intergenic | 20.0% |
| !! | ATATAGAGTAAAACAAATCA+AGG | + | chr8.2:6474504-6474523 | None:intergenic | 20.0% |
| !! | ATTAAGGATTAATATGACAT+CGG | - | chr8.2:6469826-6469845 | MS.gene051859:intron | 20.0% |
| !! | ATTGCAAAAATTTATACAGT+GGG | - | chr8.2:6474928-6474947 | MS.gene051859:intron | 20.0% |
| !! | CAAGAAAAAAAGTCAAAAAA+TGG | - | chr8.2:6471993-6472012 | MS.gene051859:intron | 20.0% |
| !! | CAATGTATTTATCTATGAAT+GGG | + | chr8.2:6472849-6472868 | None:intergenic | 20.0% |
| !! | TAAACGAGTAAAACTAAATT+TGG | - | chr8.2:6471150-6471169 | MS.gene051859:intron | 20.0% |
| !! | TAAACTATTTCAGCTTATTT+CGG | - | chr8.2:6471781-6471800 | MS.gene051859:CDS | 20.0% |
| !! | TAAGTACTTAAAATCCTATA+AGG | + | chr8.2:6472103-6472122 | None:intergenic | 20.0% |
| !! | TAGAAAATTTACAACAAATG+GGG | - | chr8.2:6473162-6473181 | MS.gene051859:intron | 20.0% |
| !! | TATGTAATATGAACTTTGAA+AGG | - | chr8.2:6475136-6475155 | MS.gene051859:intron | 20.0% |
| !! | TATTTACATAGAAAATACAC+TGG | + | chr8.2:6472463-6472482 | None:intergenic | 20.0% |
| !! | TCAATGTATTTATCTATGAA+TGG | + | chr8.2:6472850-6472869 | None:intergenic | 20.0% |
| !! | TGATAATTAAAATGCATGTA+GGG | - | chr8.2:6469522-6469541 | MS.gene051859:CDS | 20.0% |
| !! | TGCATAAACAACTTAATTAA+AGG | + | chr8.2:6471903-6471922 | None:intergenic | 20.0% |
| !! | TTTAGATTCATTTAATGAAG+GGG | + | chr8.2:6470748-6470767 | None:intergenic | 20.0% |
| !! | TTTCTCTTATTATTTAGTGA+AGG | - | chr8.2:6475258-6475277 | MS.gene051859:intron | 20.0% |
| !!! | AAAAAAAGAAACGGTTTTTT+TGG | - | chr8.2:6470655-6470674 | MS.gene051859:intron | 20.0% |
| !!! | AAAGTACGTTTTTGTTTTTT+AGG | + | chr8.2:6469745-6469764 | None:intergenic | 20.0% |
| !!! | AAATTGTTATTAGTTTGATG+GGG | - | chr8.2:6469601-6469620 | MS.gene051859:CDS | 20.0% |
| !!! | AAGTACGTTTTTGTTTTTTA+GGG | + | chr8.2:6469744-6469763 | None:intergenic | 20.0% |
| !!! | ATGTAATATGAACTTTGAAA+GGG | - | chr8.2:6475137-6475156 | MS.gene051859:intron | 20.0% |
| !!! | ATGTGTATATTGTTTTTTTG+GGG | + | chr8.2:6473827-6473846 | None:intergenic | 20.0% |
| !!! | CTTTTATGTTCAAAGATTTT+GGG | - | chr8.2:6471930-6471949 | MS.gene051859:intron | 20.0% |
| !!! | GAAATTGTTATTAGTTTGAT+GGG | - | chr8.2:6469600-6469619 | MS.gene051859:CDS | 20.0% |
| !!! | GATGTGTATATTGTTTTTTT+GGG | + | chr8.2:6473828-6473847 | None:intergenic | 20.0% |
| !!! | TCTATTGATTTATGCTTTTT+GGG | - | chr8.2:6474002-6474021 | MS.gene051859:intron | 20.0% |
| !!! | TGAATTTTTTTTATATGCAG+GGG | + | chr8.2:6471052-6471071 | None:intergenic | 20.0% |
| !!! | TGATGTGTATATTGTTTTTT+TGG | + | chr8.2:6473829-6473848 | None:intergenic | 20.0% |
| !!! | TGTAAATTTTCTATTGTGAA+AGG | + | chr8.2:6473155-6473174 | None:intergenic | 20.0% |
| !!! | TTATGTTATTTGAGTATGTT+TGG | - | chr8.2:6471669-6471688 | MS.gene051859:intron | 20.0% |
| !!! | TTCTATTGATTTATGCTTTT+TGG | - | chr8.2:6474001-6474020 | MS.gene051859:intron | 20.0% |
| !!! | TTGATAATTAAAATGCATGT+AGG | - | chr8.2:6469521-6469540 | MS.gene051859:CDS | 20.0% |
| !!! | TTTTGTTTTGTTTCAAAACT+TGG | + | chr8.2:6475083-6475102 | None:intergenic | 20.0% |
| ! | AACATCCAACAGTTAATAAT+GGG | - | chr8.2:6473892-6473911 | MS.gene051859:intron | 25.0% |
| ! | AAGCAATTAAACAATACTAG+TGG | + | chr8.2:6473258-6473277 | None:intergenic | 25.0% |
| ! | AAGTATGGAAATAAACTAGT+AGG | - | chr8.2:6472705-6472724 | MS.gene051859:intron | 25.0% |
| ! | AATATCAACAAATGGTGAAT+TGG | - | chr8.2:6470135-6470154 | MS.gene051859:intron | 25.0% |
| ! | AATTTAGGTATTTGAATGCA+TGG | + | chr8.2:6474348-6474367 | None:intergenic | 25.0% |
| ! | ACACACACTAAAAATATAGT+TGG | + | chr8.2:6470714-6470733 | None:intergenic | 25.0% |
| ! | ACATATGAAGATGATGAATA+TGG | - | chr8.2:6469905-6469924 | MS.gene051859:intron | 25.0% |
| ! | ACCTTATAAGGTGAATAAAT+GGG | - | chr8.2:6471005-6471024 | MS.gene051859:intron | 25.0% |
| ! | AGGAATATATCAATCAAATG+AGG | + | chr8.2:6472293-6472312 | None:intergenic | 25.0% |
| ! | AGTTTATTTCCATACTTGTT+GGG | + | chr8.2:6472702-6472721 | None:intergenic | 25.0% |
| ! | ATATTCGTAATTTAGCTGAT+CGG | + | chr8.2:6473544-6473563 | None:intergenic | 25.0% |
| ! | ATCAATTTGTGTATGTAAGA+TGG | + | chr8.2:6472259-6472278 | None:intergenic | 25.0% |
| ! | ATGCATTCAAATACCTAAAT+TGG | - | chr8.2:6474347-6474366 | MS.gene051859:intron | 25.0% |
| ! | CATTGCAAAAATTTATACAG+TGG | - | chr8.2:6474927-6474946 | MS.gene051859:intron | 25.0% |
| ! | TAACATCCAACAGTTAATAA+TGG | - | chr8.2:6473891-6473910 | MS.gene051859:intron | 25.0% |
| ! | TAAGAAATAATGCTAGTGAT+TGG | - | chr8.2:6469852-6469871 | MS.gene051859:intron | 25.0% |
| ! | TACTCTATATTCTTGTTCTA+AGG | - | chr8.2:6474514-6474533 | MS.gene051859:intron | 25.0% |
| ! | TAGTTTATTTCCATACTTGT+TGG | + | chr8.2:6472703-6472722 | None:intergenic | 25.0% |
| ! | TCAAAAGAAATAACTCACAA+GGG | + | chr8.2:6471475-6471494 | None:intergenic | 25.0% |
| ! | TCCTCTCTATAAAAATGATA+TGG | + | chr8.2:6471236-6471255 | None:intergenic | 25.0% |
| ! | TGTAAATACAAATAACATGC+AGG | - | chr8.2:6472475-6472494 | MS.gene051859:intron | 25.0% |
| ! | TGTTTCACTTTCAAAAAAAG+AGG | + | chr8.2:6474640-6474659 | None:intergenic | 25.0% |
| ! | TTAGATTCATTTAATGAAGG+GGG | + | chr8.2:6470747-6470766 | None:intergenic | 25.0% |
| ! | TTCAAAAGAAATAACTCACA+AGG | + | chr8.2:6471476-6471495 | None:intergenic | 25.0% |
| ! | TTTGGGCTTCATTATAAAAT+GGG | - | chr8.2:6474019-6474038 | MS.gene051859:intron | 25.0% |
| !! | AATTGTGGCAAATTTTATGA+AGG | - | chr8.2:6475598-6475617 | MS.gene051859:intron | 25.0% |
| !! | CGAAATTGTTATTAGTTTGA+TGG | - | chr8.2:6469599-6469618 | MS.gene051859:CDS | 25.0% |
| !! | GATTATGTTTTCCAATATCT+AGG | - | chr8.2:6472912-6472931 | MS.gene051859:intron | 25.0% |
| !! | GCTTTTATGTTCAAAGATTT+TGG | - | chr8.2:6471929-6471948 | MS.gene051859:intron | 25.0% |
| !! | TAAGTATGGACTAAAATGTA+TGG | + | chr8.2:6473489-6473508 | None:intergenic | 25.0% |
| !! | TTACGTTTTCAATGTTACAT+TGG | - | chr8.2:6473782-6473801 | MS.gene051859:intron | 25.0% |
| !! | TTTGAAAGGGTAAGAATTTT+GGG | - | chr8.2:6475150-6475169 | MS.gene051859:intron | 25.0% |
| !! | TTTTGGGCTTCATTATAAAA+TGG | - | chr8.2:6474018-6474037 | MS.gene051859:intron | 25.0% |
| !!! | AATTTTGTTTGCTAGTTATC+TGG | - | chr8.2:6471608-6471627 | MS.gene051859:intron | 25.0% |
| !!! | CTTTCGTTTTTCAAATGATA+GGG | - | chr8.2:6469626-6469645 | MS.gene051859:CDS | 25.0% |
| !!! | GCTATATTACATATTTTTGC+AGG | + | chr8.2:6470082-6470101 | None:intergenic | 25.0% |
| !!! | GTATTATGATTTTTTGCTGT+TGG | + | chr8.2:6472680-6472699 | None:intergenic | 25.0% |
| !!! | TACTTGTTTTCAGTTTTTGA+GGG | - | chr8.2:6474714-6474733 | MS.gene051859:intron | 25.0% |
| !!! | TCCATATCATTTTTATAGAG+AGG | - | chr8.2:6471232-6471251 | MS.gene051859:intron | 25.0% |
| !!! | TGTGTATATTGTTTTTTTGG+GGG | + | chr8.2:6473826-6473845 | None:intergenic | 25.0% |
| !!! | TTACTTGTTTTCAGTTTTTG+AGG | - | chr8.2:6474713-6474732 | MS.gene051859:intron | 25.0% |
| AAAACTATTTGCAGGATGAT+AGG | + | chr8.2:6473588-6473607 | None:intergenic | 30.0% | |
| AAAATTTACAACAAATGGGG+TGG | - | chr8.2:6473165-6473184 | MS.gene051859:intron | 30.0% | |
| AACTCGGTTTCTATTTGATA+AGG | - | chr8.2:6473080-6473099 | MS.gene051859:intron | 30.0% | |
| AATATCAGAGAAACTAACCT+TGG | + | chr8.2:6472790-6472809 | None:intergenic | 30.0% | |
| ACATTCTTCTACTCCAATTT+AGG | + | chr8.2:6474363-6474382 | None:intergenic | 30.0% | |
| ACTCGGTTTCTATTTGATAA+GGG | - | chr8.2:6473081-6473100 | MS.gene051859:intron | 30.0% | |
| ACTCTTGTAATGAAGATGAA+AGG | + | chr8.2:6474905-6474924 | None:intergenic | 30.0% | |
| AGTGAAGGTTCATTTGAATT+TGG | - | chr8.2:6473315-6473334 | MS.gene051859:intron | 30.0% | |
| ATCATAATACCCAACAAGTA+TGG | - | chr8.2:6472690-6472709 | MS.gene051859:intron | 30.0% | |
| ATGAAAAACTAACCTGTGAT+TGG | + | chr8.2:6469483-6469502 | None:intergenic | 30.0% | |
| CAATAATTGCCATAACTCTA+CGG | + | chr8.2:6473401-6473420 | None:intergenic | 30.0% | |
| CACCTTATAAGGTGAATAAA+TGG | - | chr8.2:6471004-6471023 | MS.gene051859:intron | 30.0% | |
| CATTTGAATTTGGCAACTAT+TGG | - | chr8.2:6473325-6473344 | MS.gene051859:intron | 30.0% | |
| CCAAATAATTGAGTCTGTTT+GGG | + | chr8.2:6471360-6471379 | None:intergenic | 30.0% | |
| CCTATCATTTGAAAAACGAA+AGG | + | chr8.2:6469628-6469647 | None:intergenic | 30.0% | |
| CCTTATAAGGTGAATAAATG+GGG | - | chr8.2:6471006-6471025 | MS.gene051859:intron | 30.0% | |
| CTAAATGCTCAGTATATACA+TGG | + | chr8.2:6475565-6475584 | None:intergenic | 30.0% | |
| CTAATGACAAAGTCCAATTT+GGG | - | chr8.2:6472039-6472058 | MS.gene051859:intron | 30.0% | |
| CTCTTGTAATGAAGATGAAA+GGG | + | chr8.2:6474904-6474923 | None:intergenic | 30.0% | |
| CTTATTTGAGCTTATATACC+CGG | - | chr8.2:6471697-6471716 | MS.gene051859:CDS | 30.0% | |
| GAAATCCAATAACTTGAAGA+TGG | - | chr8.2:6471433-6471452 | MS.gene051859:intron | 30.0% | |
| GAAATGCTTTCAAGAAATTC+AGG | - | chr8.2:6474389-6474408 | MS.gene051859:intron | 30.0% | |
| GCATCATTAAAACTATTTGC+AGG | + | chr8.2:6473596-6473615 | None:intergenic | 30.0% | |
| GTAACATTGAAAACGTAAAG+CGG | + | chr8.2:6473780-6473799 | None:intergenic | 30.0% | |
| GTAATGTTCCAATGTTTCTT+AGG | - | chr8.2:6474084-6474103 | MS.gene051859:intron | 30.0% | |
| GTAGAGTTATGGCAATTATT+GGG | - | chr8.2:6473400-6473419 | MS.gene051859:intron | 30.0% | |
| GTCCAGAAAATATCAACAAA+TGG | - | chr8.2:6470127-6470146 | MS.gene051859:intron | 30.0% | |
| TCCAAATAATTGAGTCTGTT+TGG | + | chr8.2:6471361-6471380 | None:intergenic | 30.0% | |
| TCTAATACATACGGATAACT+AGG | + | chr8.2:6472317-6472336 | None:intergenic | 30.0% | |
| TCTAATGACAAAGTCCAATT+TGG | - | chr8.2:6472038-6472057 | MS.gene051859:intron | 30.0% | |
| TGATTCAAAAATTAACGTCC+AGG | - | chr8.2:6470235-6470254 | MS.gene051859:intron | 30.0% | |
| TTCATCCATTTGCAAAACTT+AGG | - | chr8.2:6473218-6473237 | MS.gene051859:intron | 30.0% | |
| ! | AAAAGTTCTGACAAGATCAA+TGG | + | chr8.2:6475113-6475132 | None:intergenic | 30.0% |
| ! | ACGATATGTAACTTGTGATT+CGG | + | chr8.2:6475530-6475549 | None:intergenic | 30.0% |
| ! | ATAACTTGTATTTCATTGCC+TGG | + | chr8.2:6470256-6470275 | None:intergenic | 30.0% |
| ! | ATGAAGGAAACTTTTGCAAA+GGG | - | chr8.2:6475614-6475633 | MS.gene051859:intron | 30.0% |
| ! | GATCATTCATAATGCTACTT+AGG | + | chr8.2:6472602-6472621 | None:intergenic | 30.0% |
| ! | TATGAAGGAAACTTTTGCAA+AGG | - | chr8.2:6475613-6475632 | MS.gene051859:intron | 30.0% |
| ! | TCACATCAATCTTCTTTTGT+AGG | - | chr8.2:6474739-6474758 | MS.gene051859:intron | 30.0% |
| ! | TTTTCATAAGCTCTCTCAAA+CGG | + | chr8.2:6471743-6471762 | None:intergenic | 30.0% |
| !! | CACCATTTGTTGATATTTTC+TGG | + | chr8.2:6470132-6470151 | None:intergenic | 30.0% |
| !! | CCTTTCGTTTTTCAAATGAT+AGG | - | chr8.2:6469625-6469644 | MS.gene051859:CDS | 30.0% |
| !! | CTTTGAAAGGGTAAGAATTT+TGG | - | chr8.2:6475149-6475168 | MS.gene051859:intron | 30.0% |
| !! | TGAATTGTTTCTGTATCTTG+AGG | - | chr8.2:6474134-6474153 | MS.gene051859:intron | 30.0% |
| !! | TTGAGCTTGTTATTTATTGC+AGG | - | chr8.2:6474446-6474465 | MS.gene051859:intron | 30.0% |
| !!! | AGTGCTTTTAAGTTGTTCAT+TGG | - | chr8.2:6471555-6471574 | MS.gene051859:intron | 30.0% |
| !!! | ATGTGGGTTTTTAGTTTGAT+GGG | - | chr8.2:6469651-6469670 | MS.gene051859:intron | 30.0% |
| !!! | CAAATAGTTTTAATGATGCG+TGG | - | chr8.2:6473597-6473616 | MS.gene051859:intron | 30.0% |
| !!! | CTGATGATGTCTTTTTTTCT+GGG | + | chr8.2:6473033-6473052 | None:intergenic | 30.0% |
| !!! | TATGATTTTTTGCTGTTGGA+TGG | + | chr8.2:6472676-6472695 | None:intergenic | 30.0% |
| AAAGGTTTGTCGTGTTACAA+TGG | - | chr8.2:6473429-6473448 | MS.gene051859:intron | 35.0% | |
| ACGTATTATGAGACGTGTTA+TGG | + | chr8.2:6475429-6475448 | None:intergenic | 35.0% | |
| AGAGGATGAAAATGCAAAAC+GGG | + | chr8.2:6471412-6471431 | None:intergenic | 35.0% | |
| ATACATACGGATAACTAGGA+AGG | + | chr8.2:6472313-6472332 | None:intergenic | 35.0% | |
| ATCTTCAACTTCCTAGTTAC+AGG | - | chr8.2:6472413-6472432 | MS.gene051859:CDS | 35.0% | |
| ATGAAAGGGTGAAACTGTAA+AGG | + | chr8.2:6474890-6474909 | None:intergenic | 35.0% | |
| CACAAGTTACATATCGTCAA+AGG | - | chr8.2:6475533-6475552 | MS.gene051859:intron | 35.0% | |
| CAGAGGATGAAAATGCAAAA+CGG | + | chr8.2:6471413-6471432 | None:intergenic | 35.0% | |
| CAGTCAACATTTAACCCAAA+TGG | + | chr8.2:6471535-6471554 | None:intergenic | 35.0% | |
| CCAGAAAAAAAGACATCATC+AGG | - | chr8.2:6473031-6473050 | MS.gene051859:intron | 35.0% | |
| CCCAAACAGACTCAATTATT+TGG | - | chr8.2:6471357-6471376 | MS.gene051859:intron | 35.0% | |
| CCCCATTTATTCACCTTATA+AGG | + | chr8.2:6471009-6471028 | None:intergenic | 35.0% | |
| CGTAGAGTTATGGCAATTAT+TGG | - | chr8.2:6473399-6473418 | MS.gene051859:intron | 35.0% | |
| CTTACAAGTGATTATGCTAC+CGG | + | chr8.2:6471719-6471738 | None:intergenic | 35.0% | |
| GAATGCCCATTATTAACTGT+TGG | + | chr8.2:6473900-6473919 | None:intergenic | 35.0% | |
| GAGTAAAACAAATCAAGGCA+AGG | + | chr8.2:6474499-6474518 | None:intergenic | 35.0% | |
| GATACTGTCTTCCTAGATAT+TGG | + | chr8.2:6472926-6472945 | None:intergenic | 35.0% | |
| GATGCTAAGAATGATGTTGT+TGG | + | chr8.2:6474604-6474623 | None:intergenic | 35.0% | |
| GCATAGGATAACAATCTCTT+TGG | + | chr8.2:6472751-6472770 | None:intergenic | 35.0% | |
| GCTAATGTGACACTCAATAA+GGG | + | chr8.2:6473723-6473742 | None:intergenic | 35.0% | |
| GCTGAAAAATGCTTCCATTT+GGG | - | chr8.2:6471518-6471537 | MS.gene051859:intron | 35.0% | |
| GCTTAGTTTCAGTAGGAAAA+TGG | - | chr8.2:6472136-6472155 | MS.gene051859:CDS | 35.0% | |
| TCAAGTTATTGGATTTCCAG+AGG | + | chr8.2:6471430-6471449 | None:intergenic | 35.0% | |
| TCTGACAAGATCAATGGATA+AGG | + | chr8.2:6475107-6475126 | None:intergenic | 35.0% | |
| TCTTTAATGAGCCTGTAACT+AGG | + | chr8.2:6472427-6472446 | None:intergenic | 35.0% | |
| TGAATTTGGCAACTATTGGA+GGG | - | chr8.2:6473329-6473348 | MS.gene051859:intron | 35.0% | |
| TGCATGGATGATTAAATGCA+CGG | + | chr8.2:6474332-6474351 | None:intergenic | 35.0% | |
| TGCTAATGTGACACTCAATA+AGG | + | chr8.2:6473724-6473743 | None:intergenic | 35.0% | |
| TGCTGAAAAATGCTTCCATT+TGG | - | chr8.2:6471517-6471536 | MS.gene051859:intron | 35.0% | |
| TGGCTAGAATTCACCTTATA+AGG | - | chr8.2:6470993-6471012 | MS.gene051859:intron | 35.0% | |
| TGTGTTCTTACAACATCCTA+CGG | + | chr8.2:6472236-6472255 | None:intergenic | 35.0% | |
| TTACAAGTGATTATGCTACC+GGG | + | chr8.2:6471718-6471737 | None:intergenic | 35.0% | |
| TTCAAATGATAGGGACATGT+GGG | - | chr8.2:6469635-6469654 | MS.gene051859:CDS | 35.0% | |
| TTGAATTTGGCAACTATTGG+AGG | - | chr8.2:6473328-6473347 | MS.gene051859:intron | 35.0% | |
| TTTCAAATGATAGGGACATG+TGG | - | chr8.2:6469634-6469653 | MS.gene051859:CDS | 35.0% | |
| TTTCCTACTGAAACTAAGCT+AGG | + | chr8.2:6472135-6472154 | None:intergenic | 35.0% | |
| TTTCCTAGCTTAGTTTCAGT+AGG | - | chr8.2:6472129-6472148 | MS.gene051859:CDS | 35.0% | |
| ! | AATCTTGTTGTAGCAAGCAA+AGG | + | chr8.2:6469549-6469568 | None:intergenic | 35.0% |
| ! | GATAGCCTAAGTTTTGCAAA+TGG | + | chr8.2:6473226-6473245 | None:intergenic | 35.0% |
| ! | GCATCATGCACATTTTCATA+TGG | + | chr8.2:6470682-6470701 | None:intergenic | 35.0% |
| ! | TCGTCTTGGAAACAACTTTT+TGG | - | chr8.2:6474257-6474276 | MS.gene051859:intron | 35.0% |
| ! | TTCAGCCATCTTCAAGTTAT+TGG | + | chr8.2:6471441-6471460 | None:intergenic | 35.0% |
| !! | ATTGAGTTGAAGACTAAGTC+AGG | - | chr8.2:6474303-6474322 | MS.gene051859:intron | 35.0% |
| !! | CTTTTTGGAGAGAATCAGAA+AGG | - | chr8.2:6474272-6474291 | MS.gene051859:intron | 35.0% |
| !! | GTTCATTGGCTCTATATGTT+TGG | - | chr8.2:6471569-6471588 | MS.gene051859:intron | 35.0% |
| !! | GTTCTGAACTCTCTTTTAGT+AGG | - | chr8.2:6472061-6472080 | MS.gene051859:intron | 35.0% |
| !! | TATGTAACTTGTGATTCGGT+AGG | + | chr8.2:6475526-6475545 | None:intergenic | 35.0% |
| !!! | ATTTTTTTCAGGTAGCCTAG+TGG | - | chr8.2:6470973-6470992 | MS.gene051859:intron | 35.0% |
| !!! | CATGTGGGTTTTTAGTTTGA+TGG | - | chr8.2:6469650-6469669 | MS.gene051859:intron | 35.0% |
| !!! | CCTGATGATGTCTTTTTTTC+TGG | + | chr8.2:6473034-6473053 | None:intergenic | 35.0% |
| !!! | TTTTTTTTATATGCAGGGGC+CGG | + | chr8.2:6471048-6471067 | None:intergenic | 35.0% |
| AAATGAACCTTCACTTTCCC+TGG | + | chr8.2:6473310-6473329 | None:intergenic | 40.0% | |
| AACAAATCAAGGCAAGGCTA+TGG | + | chr8.2:6474493-6474512 | None:intergenic | 40.0% | |
| AAGGTGAATAAATGGGGTGT+CGG | - | chr8.2:6471012-6471031 | MS.gene051859:intron | 40.0% | |
| ACGCACTTCCTAAGAAACAT+TGG | + | chr8.2:6474095-6474114 | None:intergenic | 40.0% | |
| AGAGAGTTCAGAACCCAAAT+TGG | + | chr8.2:6472055-6472074 | None:intergenic | 40.0% | |
| AGTGAACGGTGAAAGTTCTT+GGG | - | chr8.2:6474954-6474973 | MS.gene051859:intron | 40.0% | |
| ATCAGAGAAACTAACCTTGG+AGG | + | chr8.2:6472787-6472806 | None:intergenic | 40.0% | |
| ATGTGACACTCAATAAGGGA+CGG | + | chr8.2:6473719-6473738 | None:intergenic | 40.0% | |
| ATTGACAAAGAATGCAGGTG+TGG | - | chr8.2:6474838-6474857 | MS.gene051859:intron | 40.0% | |
| CATTTCCAGTGAAGTCAAAG+CGG | + | chr8.2:6472996-6473015 | None:intergenic | 40.0% | |
| GAGATTGTTATCCTATGCCA+CGG | - | chr8.2:6472753-6472772 | MS.gene051859:intron | 40.0% | |
| GCAATTATTGGGCACAGTAA+AGG | - | chr8.2:6473411-6473430 | MS.gene051859:intron | 40.0% | |
| GTAGGCAAATTACATGAAGC+TGG | - | chr8.2:6472723-6472742 | MS.gene051859:intron | 40.0% | |
| GTGGCAAACTGGCAATATAT+AGG | - | chr8.2:6473616-6473635 | MS.gene051859:intron | 40.0% | |
| TAAGGTGAATTCTAGCCACT+AGG | + | chr8.2:6470991-6471010 | None:intergenic | 40.0% | |
| TATACAGTGGGATCAGTGAA+CGG | - | chr8.2:6474940-6474959 | MS.gene051859:intron | 40.0% | |
| TGAAGCAAACCGTAGAGTTA+TGG | - | chr8.2:6473389-6473408 | MS.gene051859:intron | 40.0% | |
| TGCAGATTGACAAAGAATGC+AGG | - | chr8.2:6474833-6474852 | MS.gene051859:intron | 40.0% | |
| TGCATTCTTTGTCAATCTGC+AGG | + | chr8.2:6474834-6474853 | None:intergenic | 40.0% | |
| TGGAGAGAATCAGAAAGGAA+GGG | - | chr8.2:6474277-6474296 | MS.gene051859:intron | 40.0% | |
| TGTTTCCAAGACGATCTTCA+AGG | + | chr8.2:6474251-6474270 | None:intergenic | 40.0% | |
| TTCAATGCAGTACTAGTTCC+AGG | + | chr8.2:6469971-6469990 | None:intergenic | 40.0% | |
| TTGAAGACTCAGCAAGTATC+TGG | + | chr8.2:6473466-6473485 | None:intergenic | 40.0% | |
| TTGACAAAGAATGCAGGTGT+GGG | - | chr8.2:6474839-6474858 | MS.gene051859:intron | 40.0% | |
| TTGGAGAGAATCAGAAAGGA+AGG | - | chr8.2:6474276-6474295 | MS.gene051859:intron | 40.0% | |
| TTTAATGATGCGTGGCAAAC+TGG | - | chr8.2:6473605-6473624 | MS.gene051859:intron | 40.0% | |
| ! | AGCTGAGTTAGCTTCAATTG+TGG | - | chr8.2:6475583-6475602 | MS.gene051859:intron | 40.0% |
| ! | ATGTTTCTTAGGAAGTGCGT+AGG | - | chr8.2:6474095-6474114 | MS.gene051859:intron | 40.0% |
| ! | CGTTTTGCATTTTCATCCTC+TGG | - | chr8.2:6471411-6471430 | MS.gene051859:intron | 40.0% |
| ! | GCTTTGACTTCACTGGAAAT+GGG | - | chr8.2:6472995-6473014 | MS.gene051859:intron | 40.0% |
| ! | GTCTGTGAATCGATGTCTTT+TGG | - | chr8.2:6473688-6473707 | MS.gene051859:intron | 40.0% |
| ! | TGTTGATTATCGCATAACCG+AGG | - | chr8.2:6474765-6474784 | MS.gene051859:intron | 40.0% |
| !! | CATTGGCTCTATATGTTTGG+AGG | - | chr8.2:6471572-6471591 | MS.gene051859:intron | 40.0% |
| !! | TCCTATAAGGCATTGTAGTG+CGG | + | chr8.2:6472090-6472109 | None:intergenic | 40.0% |
| !! | TTGTTTCTGTATCTTGAGGC+AGG | - | chr8.2:6474138-6474157 | MS.gene051859:intron | 40.0% |
| !!! | AGCTTTTGAGTTTCTCTTCC+AGG | - | chr8.2:6473289-6473308 | MS.gene051859:intron | 40.0% |
| !!! | GCTTTTGAGTTTCTCTTCCA+GGG | - | chr8.2:6473290-6473309 | MS.gene051859:intron | 40.0% |
| !!! | TTGTTTTTTTGGGGGAGAAC+TGG | + | chr8.2:6473818-6473837 | None:intergenic | 40.0% |
| !!! | TTTTTTTATATGCAGGGGCC+GGG | + | chr8.2:6471047-6471066 | None:intergenic | 40.0% |
| AAAACAGTTGCCAACCTCTC+TGG | - | chr8.2:6474204-6474223 | MS.gene051859:intron | 45.0% | |
| AAACCCTGACTTCTGTCATC+AGG | + | chr8.2:6473200-6473219 | None:intergenic | 45.0% | |
| AGCTTCCAATGGTCACACAT+GGG | - | chr8.2:6472185-6472204 | MS.gene051859:intron | 45.0% | |
| AGGGTGAAACTGTAAAGGAG+AGG | + | chr8.2:6474885-6474904 | None:intergenic | 45.0% | |
| ATTTGGCAACTATTGGAGGG+AGG | - | chr8.2:6473332-6473351 | MS.gene051859:intron | 45.0% | |
| CACGTCTCATAATACGTGAC+AGG | - | chr8.2:6475432-6475451 | MS.gene051859:intron | 45.0% | |
| CAGTGAACGGTGAAAGTTCT+TGG | - | chr8.2:6474953-6474972 | MS.gene051859:intron | 45.0% | |
| CATAACCGAGGAAAGCTTGA+AGG | - | chr8.2:6474777-6474796 | MS.gene051859:intron | 45.0% | |
| CTCTGGTCGCTATGATCTAA+AGG | - | chr8.2:6474221-6474240 | MS.gene051859:intron | 45.0% | |
| GAAACAGCTCATACACGAGA+AGG | - | chr8.2:6474654-6474673 | MS.gene051859:intron | 45.0% | |
| GACAGGTTCCTTACTGTTCA+TGG | - | chr8.2:6475449-6475468 | MS.gene051859:intron | 45.0% | |
| TCGATCCTTCAAGCTTTCCT+CGG | + | chr8.2:6474785-6474804 | None:intergenic | 45.0% | |
| TGGGAAACCTTCGTTGCATA+CGG | - | chr8.2:6472204-6472223 | MS.gene051859:intron | 45.0% | |
| TGTCCTGATGACAGAAGTCA+GGG | - | chr8.2:6473194-6473213 | MS.gene051859:intron | 45.0% | |
| TTAACATCCGCAGCTTCCAA+TGG | - | chr8.2:6472174-6472193 | MS.gene051859:intron | 45.0% | |
| TTAGATCATAGCGACCAGAG+AGG | + | chr8.2:6474221-6474240 | None:intergenic | 45.0% | |
| TTCTCTTCCAGGGAAAGTGA+AGG | - | chr8.2:6473300-6473319 | MS.gene051859:intron | 45.0% | |
| TTGTCCTGATGACAGAAGTC+AGG | - | chr8.2:6473193-6473212 | MS.gene051859:intron | 45.0% | |
| ! | AGGTGAATAAATGGGGTGTC+GGG | - | chr8.2:6471013-6471032 | MS.gene051859:intron | 45.0% |
| ! | CGCTTTGACTTCACTGGAAA+TGG | - | chr8.2:6472994-6473013 | MS.gene051859:intron | 45.0% |
| ! | TCTTTCCGCTTTGACTTCAC+TGG | - | chr8.2:6472988-6473007 | MS.gene051859:intron | 45.0% |
| !! | CCTATAAGGCATTGTAGTGC+GGG | + | chr8.2:6472089-6472108 | None:intergenic | 45.0% |
| !!! | TTTTTTATATGCAGGGGCCG+GGG | + | chr8.2:6471046-6471065 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTGATAAAAAAA+TGG | - | chr8.2:6470313-6470332 | MS.gene051859:CDS | 5.0% |
| AACTCAAGTGCGTCTCCAAC+GGG | + | chr8.2:6475494-6475513 | None:intergenic | 50.0% | |
| ATCATAGCGACCAGAGAGGT+TGG | + | chr8.2:6474217-6474236 | None:intergenic | 50.0% | |
| CAGCTTCCAATGGTCACACA+TGG | - | chr8.2:6472184-6472203 | MS.gene051859:intron | 50.0% | |
| CCCGCACTACAATGCCTTAT+AGG | - | chr8.2:6472086-6472105 | MS.gene051859:intron | 50.0% | |
| GAACTCAAGTGCGTCTCCAA+CGG | + | chr8.2:6475495-6475514 | None:intergenic | 50.0% | |
| GCGGACACAATAATTCCCGT+TGG | - | chr8.2:6475476-6475495 | MS.gene051859:intron | 50.0% | |
| GCTAAGACCGTATGCAACGA+AGG | + | chr8.2:6472214-6472233 | None:intergenic | 50.0% | |
| GGTCGCTATGATCTAAAGGC+AGG | - | chr8.2:6474225-6474244 | MS.gene051859:intron | 50.0% | |
| GGTTTCCCATGTGTGACCAT+TGG | + | chr8.2:6472193-6472212 | None:intergenic | 50.0% | |
| TAGTTCCAGGCTGAGGTTCT+TGG | + | chr8.2:6469958-6469977 | None:intergenic | 50.0% | |
| TCTTGAGGCAGGAGCTAATG+TGG | - | chr8.2:6474149-6474168 | MS.gene051859:intron | 50.0% | |
| TGTGTGACCATTGGAAGCTG+CGG | + | chr8.2:6472184-6472203 | None:intergenic | 50.0% | |
| TTGCATACGGTCTTAGCCGT+AGG | - | chr8.2:6472217-6472236 | MS.gene051859:intron | 50.0% | |
| ! | CCTTACTGTTCATGGTGACG+CGG | - | chr8.2:6475457-6475476 | MS.gene051859:intron | 50.0% |
| ! | GCTGCTGCTCTAGATAATGC+AGG | - | chr8.2:6472958-6472977 | MS.gene051859:intron | 50.0% |
| !! | GGTGAATAAATGGGGTGTCG+GGG | - | chr8.2:6471014-6471033 | MS.gene051859:intron | 50.0% |
| CCGCGTCACCATGAACAGTA+AGG | + | chr8.2:6475460-6475479 | None:intergenic | 55.0% | |
| GCAGGCCTTGAAGATCGTCT+TGG | - | chr8.2:6474243-6474262 | MS.gene051859:intron | 55.0% | |
| GCAGTACTAGTTCCAGGCTG+AGG | + | chr8.2:6469965-6469984 | None:intergenic | 55.0% | |
| AGGCTCGAAGACCGTGGCAT+AGG | + | chr8.2:6472767-6472786 | None:intergenic | 60.0% | |
| CCACACCAAGAACCTCAGCC+TGG | - | chr8.2:6469950-6469969 | MS.gene051859:intron | 60.0% | |
| CCAGGCTGAGGTTCTTGGTG+TGG | + | chr8.2:6469953-6469972 | None:intergenic | 60.0% | |
| CCACGGTCTTCGAGCCTCCA+AGG | - | chr8.2:6472770-6472789 | MS.gene051859:intron | 65.0% | |
| CCTTGGAGGCTCGAAGACCG+TGG | + | chr8.2:6472773-6472792 | None:intergenic | 65.0% | |
| !! | GGGTGTCGGGGTTCGAACCC+CGG | - | chr8.2:6471026-6471045 | MS.gene051859:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 6469474 | 6475646 | 6469474 | ID=MS.gene051859 |
| chr8.2 | mRNA | 6469474 | 6475646 | 6469474 | ID=MS.gene051859.t1;Parent=MS.gene051859 |
| chr8.2 | exon | 6475631 | 6475646 | 6475631 | ID=MS.gene051859.t1.exon1;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6475631 | 6475646 | 6475631 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| chr8.2 | exon | 6472329 | 6472447 | 6472329 | ID=MS.gene051859.t1.exon2;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6472329 | 6472447 | 6472329 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| chr8.2 | exon | 6472104 | 6472186 | 6472104 | ID=MS.gene051859.t1.exon3;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6472104 | 6472186 | 6472104 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| chr8.2 | exon | 6471688 | 6471809 | 6471688 | ID=MS.gene051859.t1.exon4;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6471688 | 6471809 | 6471688 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| chr8.2 | exon | 6470796 | 6470960 | 6470796 | ID=MS.gene051859.t1.exon5;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6470796 | 6470960 | 6470796 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| chr8.2 | exon | 6470266 | 6470359 | 6470266 | ID=MS.gene051859.t1.exon6;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6470266 | 6470359 | 6470266 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| chr8.2 | exon | 6469474 | 6469666 | 6469474 | ID=MS.gene051859.t1.exon7;Parent=MS.gene051859.t1 |
| chr8.2 | CDS | 6469474 | 6469666 | 6469474 | ID=cds.MS.gene051859.t1;Parent=MS.gene051859.t1 |
| Gene Sequence |
| Protein sequence |
