AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74058


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74058.t1 MTR_7g024390 98.765 648 8 0 1 648 1 648 0.0 1320
MS.gene74058.t1 MTR_7g099680 93.837 649 39 1 1 648 1 649 0.0 1259
MS.gene74058.t1 MTR_7g024580 92.638 652 41 3 1 648 1 649 0.0 1240
MS.gene74058.t1 MTR_4g063710 92.000 650 49 2 1 648 1 649 0.0 1224
MS.gene74058.t1 MTR_4g063720 91.859 651 48 2 1 648 1 649 0.0 1221
MS.gene74058.t1 MTR_4g130540 86.595 649 81 1 6 648 5 653 0.0 1148
MS.gene74058.t1 MTR_6g033850 67.480 615 199 1 1 615 1 614 0.0 853
MS.gene74058.t1 MTR_6g033760 66.883 616 203 1 1 616 1 615 0.0 841
MS.gene74058.t1 MTR_7g025760 66.023 621 207 3 1 619 1 619 0.0 838
MS.gene74058.t1 MTR_7g026030 65.700 621 208 4 1 619 1 618 0.0 831
MS.gene74058.t1 MTR_2g017730 67.107 605 179 3 9 607 8 598 0.0 826
MS.gene74058.t1 MTR_5g066800 64.490 628 208 4 1 615 1 626 0.0 823
MS.gene74058.t1 MTR_7g021440 65.528 615 208 3 1 613 1 613 0.0 822
MS.gene74058.t1 MTR_2g038260 66.397 619 201 6 1 615 1 616 0.0 821
MS.gene74058.t1 MTR_2g032550 66.069 613 204 3 6 615 7 618 0.0 818
MS.gene74058.t1 MTR_8g032650 65.700 621 208 4 1 619 1 618 0.0 815
MS.gene74058.t1 MTR_7g025720 64.734 621 214 4 1 619 1 618 0.0 811
MS.gene74058.t1 MTR_7g025820 66.499 597 196 3 1 595 1 595 0.0 810
MS.gene74058.t1 MTR_7g451380 64.401 618 216 3 1 615 1 617 0.0 806
MS.gene74058.t1 MTR_7g026110 63.533 617 219 5 1 615 1 613 0.0 803
MS.gene74058.t1 MTR_8g099945 65.309 614 207 4 7 618 36 645 0.0 801
MS.gene74058.t1 MTR_8g099795 65.472 614 206 4 7 618 36 645 0.0 801
MS.gene74058.t1 MTR_7g025790 64.401 618 215 4 1 616 1 615 0.0 801
MS.gene74058.t1 MTR_7g024030 64.648 611 211 4 1 609 1 608 0.0 797
MS.gene74058.t1 MTR_7g025620 64.754 610 210 4 1 608 1 607 0.0 797
MS.gene74058.t1 MTR_7g025630 64.090 621 204 6 1 619 1 604 0.0 790
MS.gene74058.t1 MTR_7g078190 63.840 625 217 7 1 619 1 622 0.0 788
MS.gene74058.t1 MTR_7g026090 64.228 615 214 3 1 613 1 611 0.0 788
MS.gene74058.t1 MTR_6g033870 63.259 626 223 3 2 621 3 627 0.0 786
MS.gene74058.t1 MTR_7g029415 64.332 614 211 7 6 615 13 622 0.0 785
MS.gene74058.t1 MTR_2g022050 65.049 618 212 3 1 615 1 617 0.0 784
MS.gene74058.t1 MTR_4g079590 63.339 611 219 4 1 608 1 609 0.0 783
MS.gene74058.t1 MTR_7g025740 63.328 619 213 6 1 608 1 616 0.0 783
MS.gene74058.t1 MTR_6g033955 62.620 626 228 2 1 621 1 625 0.0 781
MS.gene74058.t1 MTR_7g025770 62.969 613 222 4 6 615 6 616 0.0 778
MS.gene74058.t1 MTR_8g103930 62.141 626 206 6 4 616 6 613 0.0 778
MS.gene74058.t1 MTR_2g437440 63.107 618 206 4 1 615 1 599 0.0 777
MS.gene74058.t1 MTR_6g033820 61.514 634 238 2 1 629 1 633 0.0 776
MS.gene74058.t1 MTR_7g011590 63.857 617 206 5 1 615 1 602 0.0 776
MS.gene74058.t1 MTR_7g078210 63.622 624 219 6 1 619 1 621 0.0 775
MS.gene74058.t1 MTR_7g026170 63.166 619 221 6 1 615 1 616 0.0 775
MS.gene74058.t1 MTR_2g038270 60.987 628 229 7 1 615 1 625 0.0 761
MS.gene74058.t1 MTR_7g074460 62.621 618 209 4 1 616 1 598 0.0 749
MS.gene74058.t1 MTR_7g026130 62.963 621 218 7 1 613 1 617 0.0 749
MS.gene74058.t1 MTR_2g032580 62.197 619 197 6 1 615 1 586 0.0 743
MS.gene74058.t1 MTR_4g027145 59.746 631 235 8 1 615 1 628 0.0 735
MS.gene74058.t1 MTR_7g026140 60.420 619 220 8 1 614 1 599 0.0 731
MS.gene74058.t1 MTR_7g025260 62.478 573 211 3 49 619 21 591 0.0 723
MS.gene74058.t1 MTR_1g017130 59.247 611 204 7 1 608 1 569 0.0 714
MS.gene74058.t1 MTR_7g451360 58.776 621 191 7 1 617 1 560 0.0 701
MS.gene74058.t1 MTR_6g033800 65.209 526 180 2 90 615 1 523 0.0 696
MS.gene74058.t1 MTR_2g040370 87.047 386 48 1 4 389 1024 1407 0.0 690
MS.gene74058.t1 MTR_2g040370 85.233 386 54 2 4 388 1408 1791 0.0 655
MS.gene74058.t1 MTR_2g040260 83.000 400 66 1 1 400 1030 1427 0.0 689
MS.gene74058.t1 MTR_2g040370 86.632 389 50 1 4 392 1024 1410 0.0 689
MS.gene74058.t1 MTR_2g040370 85.195 385 54 2 4 387 1408 1790 0.0 652
MS.gene74058.t1 MTR_2g040160 83.291 395 64 1 6 400 1106 1498 0.0 677
MS.gene74058.t1 MTR_7g007000 56.543 619 218 7 1 614 1 573 0.0 673
MS.gene74058.t1 MTR_7g035155 56.149 618 212 7 1 615 1 562 0.0 663
MS.gene74058.t1 MTR_4g063720 89.589 365 32 3 287 648 217 578 0.0 654
MS.gene74058.t1 MTR_4g063720 91.518 224 19 0 1 224 1 224 3.89e-144 431
MS.gene74058.t1 MTR_2g040220 73.128 454 104 4 1 436 1010 1463 0.0 651
MS.gene74058.t1 MTR_2g040220 56.872 211 34 4 446 648 1397 1558 1.82e-55 205
MS.gene74058.t1 MTR_2g040350 79.449 399 76 3 6 400 1035 1431 0.0 644
MS.gene74058.t1 MTR_1g041565 55.700 614 195 10 6 615 2 542 0.0 644
MS.gene74058.t1 MTR_2g040350 79.449 399 76 3 6 400 817 1213 0.0 644
MS.gene74058.t1 MTR_2g032160 73.067 375 99 1 1 373 1 375 0.0 580
MS.gene74058.t1 MTR_2g032160 42.424 99 56 1 519 616 365 463 2.57e-12 70.1
MS.gene74058.t1 MTR_2g010020 52.249 578 249 10 10 580 58 615 0.0 566
MS.gene74058.t1 MTR_2g010020 52.249 578 249 10 10 580 57 614 0.0 565
MS.gene74058.t1 MTR_4g092920 51.730 578 253 9 10 578 54 614 0.0 558
MS.gene74058.t1 MTR_2g005690 47.649 638 296 12 10 637 72 681 0.0 532
MS.gene74058.t1 MTR_6g034005 49.360 547 254 8 80 615 2 536 1.38e-166 493
MS.gene74058.t1 MTR_4g092920 51.710 497 215 8 90 578 1 480 1.58e-163 479
MS.gene74058.t1 MTR_1g077230 74.468 282 70 1 1 280 1 282 3.12e-152 441
MS.gene74058.t1 MTR_4g088515 55.814 430 102 7 9 436 276 619 6.19e-146 437
MS.gene74058.t1 MTR_6g033810 59.337 332 85 3 86 415 8 291 3.11e-126 375
MS.gene74058.t1 MTR_7g026050 51.872 374 151 3 243 615 1 346 1.62e-125 375
MS.gene74058.t1 MTR_7g026080 70.732 246 70 1 1 244 1 246 3.85e-122 363
MS.gene74058.t1 MTR_6g033855 52.493 381 93 5 86 464 8 302 5.37e-120 360
MS.gene74058.t1 MTR_2g040355 47.289 461 82 10 187 646 2 302 1.21e-109 333
MS.gene74058.t1 MTR_2g031670 69.778 225 66 1 21 243 43 267 2.19e-108 331
MS.gene74058.t1 MTR_2g031670 74.627 67 16 1 342 408 275 340 2.52e-21 96.3
MS.gene74058.t1 MTR_5g006180 35.388 503 284 11 9 494 29 507 1.08e-88 287
MS.gene74058.t1 MTR_1g077240 54.209 297 126 4 320 615 1 288 1.79e-87 275
MS.gene74058.t1 MTR_2g102180 34.932 438 269 4 10 434 4 438 3.41e-84 282
MS.gene74058.t1 MTR_4g012050 34.932 438 269 4 10 434 4 438 3.63e-83 280
MS.gene74058.t1 MTR_1207s0010 71.591 176 49 1 106 281 1 175 1.19e-81 255
MS.gene74058.t1 MTR_5g097190 54.545 253 66 4 4 254 153 358 1.38e-79 257
MS.gene74058.t1 MTR_6g478100 60.849 212 69 2 36 247 10 207 9.12e-79 253
MS.gene74058.t1 MTR_6g478100 40.000 95 56 1 515 608 208 302 4.13e-12 68.2
MS.gene74058.t1 MTR_5g092570 34.660 427 270 4 10 430 4 427 1.92e-76 260
MS.gene74058.t1 MTR_3g051300 33.333 420 275 4 10 428 4 419 1.24e-75 258
MS.gene74058.t1 MTR_5g090110 33.874 493 273 13 9 482 28 486 6.41e-74 247
MS.gene74058.t1 MTR_4g115780 34.774 509 306 10 9 496 140 643 8.65e-70 240
MS.gene74058.t1 MTR_5g005870 41.718 326 178 5 265 587 35 351 1.54e-68 229
MS.gene74058.t1 MTR_4g107920 32.143 504 307 14 10 496 21 506 1.30e-67 231
MS.gene74058.t1 MTR_3g081170 27.947 526 334 13 10 498 27 544 1.17e-57 209
MS.gene74058.t1 MTR_6g033910 47.186 231 59 4 72 300 19 188 2.19e-55 187
MS.gene74058.t1 MTR_7g074540 48.756 201 102 1 416 616 1 200 3.92e-54 184
MS.gene74058.t1 MTR_1g116250 44.000 275 111 5 342 615 56 288 4.06e-54 187
MS.gene74058.t1 MTR_7g026180 75.630 119 29 0 74 192 21 139 3.08e-53 186
MS.gene74058.t1 MTR_7g026180 35.023 217 108 4 401 615 144 329 1.33e-27 114
MS.gene74058.t1 MTR_2g017710 43.077 260 63 6 223 480 17 193 5.74e-48 170
MS.gene74058.t1 MTR_7g451390 48.634 183 92 2 436 617 10 191 1.45e-47 166
MS.gene74058.t1 MTR_5g005890 38.326 227 89 4 72 297 5 181 1.33e-42 152
MS.gene74058.t1 MTR_1g068900 51.316 152 66 4 426 573 23 170 3.46e-38 139
MS.gene74058.t1 MTR_6g033805 76.056 71 17 0 1 71 1 71 5.08e-32 119
MS.gene74058.t1 MTR_4g027235 72.000 75 19 1 1 73 1 75 1.09e-29 112
MS.gene74058.t1 MTR_4g027085 72.000 75 19 1 1 73 1 75 1.09e-29 112
MS.gene74058.t1 MTR_7g026190 57.447 94 31 2 286 379 9 93 7.17e-28 112
MS.gene74058.t1 MTR_7g026190 39.496 119 69 2 498 616 94 209 1.67e-15 76.3
MS.gene74058.t1 MTR_2g040375 76.667 60 14 0 398 457 51 110 6.78e-23 94.7
MS.gene74058.t1 MTR_4g115860 46.739 92 49 0 396 487 29 120 2.41e-22 93.2
MS.gene74058.t1 MTR_6g033815 54.930 71 32 0 524 594 1 71 4.01e-20 86.3
MS.gene74058.t1 MTR_7g021430 52.000 75 36 0 213 287 1 75 1.96e-18 84.3
MS.gene74058.t1 MTR_7g026095 45.652 92 50 0 482 573 256 347 5.47e-18 86.3
MS.gene74058.t1 MTR_7g026095 50.000 88 28 2 86 173 189 260 8.38e-17 82.8
MS.gene74058.t1 MTR_7g026160 37.500 120 49 4 296 389 72 191 2.72e-12 67.8
MS.gene74058.t1 MTR_6g033995 53.226 62 21 2 1 60 1 56 6.03e-11 58.9
MS.gene74058.t1 MTR_4g115785 44.615 65 36 0 440 504 7 71 9.81e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74058.t1 AT5G02500 91.705 651 51 1 1 648 1 651 0.0 1231
MS.gene74058.t1 AT3G12580 93.088 651 41 3 1 648 1 650 0.0 1228
MS.gene74058.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74058.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74058.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74058.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74058.t1 AT5G02490 89.740 653 62 2 1 648 1 653 0.0 1202
MS.gene74058.t1 AT1G56410 87.722 619 74 1 1 619 1 617 0.0 1125
MS.gene74058.t1 AT1G16030 83.077 650 104 3 1 648 1 646 0.0 1117
MS.gene74058.t1 AT5G42020 65.064 624 211 5 7 627 35 654 0.0 830
MS.gene74058.t1 AT5G42020 65.064 624 211 5 7 627 40 659 0.0 829
MS.gene74058.t1 AT5G28540 65.635 614 205 4 7 618 35 644 0.0 827
MS.gene74058.t1 AT1G09080 62.969 613 222 3 7 618 40 648 0.0 786
MS.gene74058.t1 AT1G09080 62.969 613 222 3 7 618 50 658 0.0 785
MS.gene74058.t1 AT5G02500 93.909 394 24 0 1 394 1 394 0.0 778
MS.gene74058.t1 AT5G02500 77.206 136 28 1 516 648 386 521 5.58e-57 201
MS.gene74058.t1 AT5G42020 58.974 624 194 10 7 627 35 599 0.0 700
MS.gene74058.t1 AT5G09590 52.931 580 243 10 10 580 60 618 0.0 560
MS.gene74058.t1 AT4G24280 49.186 614 286 11 10 617 81 674 0.0 539
MS.gene74058.t1 AT5G49910 48.644 627 295 11 10 628 81 688 0.0 538
MS.gene74058.t1 AT4G37910 51.730 578 253 9 10 578 55 615 0.0 531
MS.gene74058.t1 AT4G37910 51.730 578 253 9 10 578 55 615 0.0 531
MS.gene74058.t1 AT1G79930 29.468 733 416 14 10 648 4 729 5.01e-91 300
MS.gene74058.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.51e-90 291
MS.gene74058.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.51e-90 291
MS.gene74058.t1 AT1G79930 29.059 733 419 15 10 648 4 729 1.33e-88 293
MS.gene74058.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.17e-86 286
MS.gene74058.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.83e-86 286
MS.gene74058.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.83e-86 286
MS.gene74058.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.83e-86 286
MS.gene74058.t1 AT1G11660 27.111 675 405 11 10 619 4 656 3.50e-83 278
MS.gene74058.t1 AT1G11660 27.111 675 405 11 10 619 4 656 3.50e-83 278
MS.gene74058.t1 AT1G11660 27.111 675 405 11 10 619 4 656 3.50e-83 278
MS.gene74058.t1 AT1G11660 27.187 640 379 11 45 619 2 619 4.22e-75 255
MS.gene74058.t1 AT4G16660 25.734 715 419 18 5 612 22 731 1.40e-60 218
MS.gene74058.t1 AT4G16660 25.734 715 419 18 5 612 46 755 2.07e-60 217

Find 153 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTAAATTTGAGCTTTC+CGG 0.203220 7.4:-76919520 MS.gene74058:CDS
GGTTCAAGATTTGTTGCTTT+TGG 0.209433 7.4:-76919725 MS.gene74058:CDS
TAATCGACTTCTTCAATCTT+AGG 0.232445 7.4:+76918980 None:intergenic
GGATGTCACTCCATTGTCTC+TGG 0.248597 7.4:-76919704 MS.gene74058:CDS
AGAGAAAACTTGCTCCTTCT+TGG 0.262011 7.4:+76919621 None:intergenic
ATGCGGTTCTCAATCTTCTA+AGG 0.266261 7.4:+76920109 None:intergenic
ATCTTCTGCCTTGTATTTCT+CGG 0.268009 7.4:+76919321 None:intergenic
TGTAACAGTTGCTGAACTTT+GGG 0.289666 7.4:+76919856 None:intergenic
ACCCAACAGGTTGTTGTCTC+TGG 0.293783 7.4:+76919537 None:intergenic
GTTCATGATGTTGTTCTTGT+TGG 0.297305 7.4:-76919895 MS.gene74058:CDS
CGTTCGGTTTCCTTGATCAT+TGG 0.309046 7.4:+76921622 None:intergenic
TGCTGAAGAAATTTCATCTA+TGG 0.318039 7.4:-76920547 MS.gene74058:CDS
GGACCAGCAGTAACCTTAAA+AGG 0.319176 7.4:+76920624 None:intergenic
TTACCGAAAACAGTGTTAAC+AGG 0.319243 7.4:+76921524 None:intergenic
TGATACATCTTAGCAATGAT+TGG 0.323430 7.4:+76919073 None:intergenic
CGTACTCGTGTGTTGGAGTA+TGG 0.329400 7.4:-76921670 MS.gene74058:CDS
CCCAGATCTATTCCGATTGC+AGG 0.350491 7.4:+76921698 None:intergenic
CACTCCATTGTCTCTGGGTC+TGG 0.356891 7.4:-76919698 MS.gene74058:CDS
CCCGACGAGGCTGTTGCTTA+TGG 0.363421 7.4:-76919793 MS.gene74058:CDS
CTGTTACAAGATTTCTTCAA+TGG 0.363779 7.4:-76919841 MS.gene74058:CDS
GTTGGAATTGTTGTGTTCCT+TGG 0.367995 7.4:+76919643 None:intergenic
CGGTGATGCCGCTAAGAATC+AGG 0.368903 7.4:-76921558 MS.gene74058:CDS
AAGGATGCCGGTGTCATTGC+AGG 0.369704 7.4:-76920417 MS.gene74058:CDS
CATGTTAAGTTCCTCAAATC+TGG 0.373759 7.4:+76919987 None:intergenic
TCCTGCAATCGGAATAGATC+TGG 0.379604 7.4:-76921699 MS.gene74058:CDS
ACAGATGCTAAACGTTTGAT+TGG 0.381796 7.4:-76920693 MS.gene74058:intron
CTCTTTCACCCTCGTAGACT+TGG 0.382367 7.4:+76919566 None:intergenic
AGAGGGTATCTTTGAAGTTA+AGG 0.389960 7.4:-76920247 MS.gene74058:CDS
CCTCCAGCAGCAGGTGGTGC+TGG 0.395029 7.4:-76919004 MS.gene74058:CDS
TGCGTATGGTCTTGACAAAA+AGG 0.402154 7.4:-76920349 MS.gene74058:CDS
TCCATACCACCAGCCATATC+AGG 0.402194 7.4:+76919037 None:intergenic
TTGTAACAGTTGCTGAACTT+TGG 0.408024 7.4:+76919855 None:intergenic
GGTTGATGCAAAGAATGCTT+TGG 0.410300 7.4:-76919281 MS.gene74058:CDS
AATGACACCGGCATCCTTTG+TGG 0.411720 7.4:+76920422 None:intergenic
TGAGATTGATTCTTTGTTTG+AGG 0.412145 7.4:-76920040 MS.gene74058:CDS
AGGTGGAGGTGCTCCTGATA+TGG 0.414427 7.4:-76919050 MS.gene74058:CDS
CGACAAAGGAAGGTTGTCTA+AGG 0.418046 7.4:-76919371 MS.gene74058:CDS
TCTGCTGAGGACAAAACAAC+TGG 0.419349 7.4:-76919421 MS.gene74058:CDS
GATGTCACTCCATTGTCTCT+GGG 0.422097 7.4:-76919703 MS.gene74058:CDS
CCATAAGCAACAGCCTCGTC+GGG 0.424062 7.4:+76919793 None:intergenic
GGATTTGTTCAGAAAGTGTA+TGG 0.424572 7.4:-76919965 MS.gene74058:CDS
TCCTGATATGGCTGGTGGTA+TGG 0.425793 7.4:-76919038 MS.gene74058:CDS
ACAATTAAAGACGAGAAGAT+TGG 0.430790 7.4:-76919232 MS.gene74058:CDS
CTTGTAGTTAACACCAATCA+TGG 0.433031 7.4:+76920590 None:intergenic
CATGATGTTGTTCTTGTTGG+TGG 0.435475 7.4:-76919892 MS.gene74058:CDS
GAGATTGCCGAAGCTTATCT+TGG 0.435979 7.4:-76920507 MS.gene74058:CDS
CAACATAAGACGGCGTCGTT+CGG 0.436894 7.4:+76921606 None:intergenic
TTTAAGGTTACTGCTGGTCC+TGG 0.442913 7.4:-76920621 MS.gene74058:CDS
GATACATCTTAGCAATGATT+GGG 0.442977 7.4:+76919074 None:intergenic
AAGAACAAGAAGGATATTAG+TGG 0.449089 7.4:-76920144 MS.gene74058:CDS
CTCAATCTTCTAAGGGCCCT+AGG 0.453115 7.4:+76920117 None:intergenic
AAAGCTCAAATTTACCCAAC+AGG 0.453939 7.4:+76919524 None:intergenic
AAAACTTGCTCCTTCTTGGT+TGG 0.457926 7.4:+76919625 None:intergenic
TAAGGAAGAAATTGAGAAGA+TGG 0.466344 7.4:-76919353 MS.gene74058:CDS
TTGAATCCATCAACAATGTC+CGG 0.470453 7.4:-76921734 None:intergenic
ACTCATCAGCCTCTGCCAAC+TGG 0.471841 7.4:+76919134 None:intergenic
TTCTTGTTGGTGGTTCAACT+AGG 0.473139 7.4:-76919882 MS.gene74058:CDS
GGACCAGCACCACCTGCTGC+TGG 0.476038 7.4:+76919001 None:intergenic
ACTGCTGGTGATACCCATCT+TGG 0.479477 7.4:-76920222 MS.gene74058:CDS
TTTGAAGTTAAGGCCACTGC+TGG 0.480129 7.4:-76920237 MS.gene74058:CDS
GAGATTGATTCTTTGTTTGA+GGG 0.481259 7.4:-76920039 MS.gene74058:CDS
AGCTGAACCAAGATAAGCTT+CGG 0.483247 7.4:+76920500 None:intergenic
CCATCAACAATGTCCGGAAA+AGG 0.487274 7.4:-76921728 None:intergenic
GAGATCATCGCCAATGATCA+AGG 0.487997 7.4:-76921632 MS.gene74058:CDS
ACCAGAGACAACAACCTGTT+GGG 0.489501 7.4:-76919538 MS.gene74058:CDS
CAAAATCTTCACCACCAAGA+TGG 0.490509 7.4:+76920208 None:intergenic
AATCACCCGTGCCAGATTTG+AGG 0.493096 7.4:-76919998 MS.gene74058:CDS
ACCATAAGCAACAGCCTCGT+CGG 0.494387 7.4:+76919792 None:intergenic
GGAGGTGCTCCTGATATGGC+TGG 0.498862 7.4:-76919046 MS.gene74058:CDS
ACAAGATTTCTTCAATGGAA+AGG 0.499431 7.4:-76919836 MS.gene74058:CDS
GAGTGGTGAAGGCAACGAAA+AGG 0.504111 7.4:-76919746 MS.gene74058:CDS
AGAAATTGAGAAGATGGTTG+AGG 0.504892 7.4:-76919347 MS.gene74058:CDS
AAAGGAGAAGGTCCTGCAAT+CGG 0.506751 7.4:-76921710 MS.gene74058:CDS
TGACGCTGCAATTCAGTGGT+TGG 0.507402 7.4:-76919164 MS.gene74058:CDS
ATCATTGCTAAGATGTATCA+AGG 0.508198 7.4:-76919070 MS.gene74058:CDS
ATGCTAAACGTTTGATTGGA+AGG 0.508528 7.4:-76920689 MS.gene74058:CDS
TCGAAGCAAACTGTGATTTG+AGG 0.510318 7.4:+76919472 None:intergenic
TCAATCTTCTAAGGGCCCTA+GGG 0.514705 7.4:+76920118 None:intergenic
GATGAAGTTCCTCCAGCAGC+AGG 0.518012 7.4:-76919013 MS.gene74058:CDS
TGAGGAACACCACGAGGAGC+TGG 0.520055 7.4:+76919490 None:intergenic
AAAATCTTCACCACCAAGAT+GGG 0.521512 7.4:+76920209 None:intergenic
ACTGATAGTGAGAGATTGAT+CGG 0.525979 7.4:-76921578 MS.gene74058:CDS
CAGATTTGAGGAACTTAACA+TGG 0.526448 7.4:-76919986 MS.gene74058:CDS
ACGAGGAGCTGGAGGAATGC+CGG 0.527908 7.4:+76919501 None:intergenic
AAACAAAGAATCAATCTCAA+TGG 0.529138 7.4:+76920044 None:intergenic
GTTTCCAGACCCAGAGACAA+TGG 0.530523 7.4:+76919694 None:intergenic
CATGATTGGTGTTAACTACA+AGG 0.531338 7.4:-76920589 MS.gene74058:CDS
TGCTTCGACATTGATGCCAA+TGG 0.532548 7.4:-76919457 MS.gene74058:CDS
TGCGAGTCGTTGAAGTAAGC+TGG 0.536329 7.4:+76920453 None:intergenic
CGTCAAGCCACAAAGGATGC+CGG 0.537740 7.4:-76920429 MS.gene74058:CDS
ACTGCTGCAGCTATTGCGTA+TGG 0.538113 7.4:-76920363 MS.gene74058:CDS
GTGTTTGAGAGATGCTAAGA+TGG 0.538683 7.4:-76919929 MS.gene74058:CDS
TGAGTTTGAAGATAAGATGA+AGG 0.542099 7.4:-76919116 MS.gene74058:CDS
GCTGGTGATACCCATCTTGG+TGG 0.543324 7.4:-76920219 MS.gene74058:CDS
AGACAACCTTCCTTTGTCGT+TGG 0.545078 7.4:+76919375 None:intergenic
CCTGGTGAAAAGCCCATGAT+TGG 0.545365 7.4:-76920603 MS.gene74058:CDS
AGGATATTAGTGGAAACCCT+AGG 0.550597 7.4:-76920134 MS.gene74058:CDS
TGCGGTTCTCAATCTTCTAA+GGG 0.556751 7.4:+76920110 None:intergenic
TAGCAATGATTGGGTTGCAA+AGG 0.559904 7.4:+76919083 None:intergenic
TACGCAATAGCTGCAGCAGT+TGG 0.561227 7.4:+76920366 None:intergenic
GTAACAGTTGCTGAACTTTG+GGG 0.564399 7.4:+76919857 None:intergenic
GTTTAAGAGGAAGAACAAGA+AGG 0.567567 7.4:-76920154 MS.gene74058:CDS
GTCGCTTCTTACTATTGAAG+AGG 0.570890 7.4:-76920265 MS.gene74058:CDS
AACCAGAGACAACAACCTGT+TGG 0.571016 7.4:-76919539 MS.gene74058:CDS
TCTCTGGGTCTGGAAACTGC+TGG 0.575088 7.4:-76919688 MS.gene74058:CDS
TCATGACAGTTCTCATTCCA+AGG 0.575999 7.4:-76919660 MS.gene74058:CDS
CACAACAATTCCAACCAAGA+AGG 0.576868 7.4:-76919635 MS.gene74058:CDS
GGACAGTAACCAGTTGGCAG+AGG 0.580101 7.4:-76919143 MS.gene74058:CDS
AAGTTCCTCAAATCTGGCAC+GGG 0.580117 7.4:+76919993 None:intergenic
CCTGCAATCGGAATAGATCT+GGG 0.580300 7.4:-76921698 MS.gene74058:CDS
AAATCTGGCACGGGTGATTG+TGG 0.583692 7.4:+76920002 None:intergenic
GAAATACAAGGCAGAAGATG+AGG 0.586111 7.4:-76919317 MS.gene74058:CDS
GGATATTAGTGGAAACCCTA+GGG 0.593830 7.4:-76920133 MS.gene74058:CDS
TAAGTTCCTCAAATCTGGCA+CGG 0.594794 7.4:+76919992 None:intergenic
CCAGCACCACCTGCTGCTGG+AGG 0.596593 7.4:+76919004 None:intergenic
ACAATGTCCGGAAAAGGAGA+AGG 0.599156 7.4:-76921722 MS.gene74058:CDS
CATCGCGACCTGATTCTTAG+CGG 0.600028 7.4:+76921550 None:intergenic
GGAACAACGTACTCGTGTGT+TGG 0.600251 7.4:-76921677 MS.gene74058:CDS
TGAGGAAGCCGAGAAATACA+AGG 0.601017 7.4:-76919329 MS.gene74058:CDS
AGAGACATTCAAGATACCAT+TGG 0.601087 7.4:+76919441 None:intergenic
CTATCACCAACGACAAAGGA+AGG 0.602262 7.4:-76919381 MS.gene74058:CDS
GCTAAGATGTATCAAGGTGG+AGG 0.602520 7.4:-76919064 MS.gene74058:CDS
AAAACTATGCTTACAACATG+AGG 0.603991 7.4:-76919258 MS.gene74058:CDS
TCGCTTCTTACTATTGAAGA+GGG 0.605746 7.4:-76920264 MS.gene74058:CDS
GTGGTTGGACAGTAACCAGT+TGG 0.608307 7.4:-76919149 MS.gene74058:CDS
ATTACTATCACCAACGACAA+AGG 0.608995 7.4:-76919385 MS.gene74058:CDS
TTGTAGTTAACACCAATCAT+GGG 0.609538 7.4:+76920591 None:intergenic
GTAGACTTGGATCAAGACAC+CGG 0.609580 7.4:+76919579 None:intergenic
TCTCTTCGCTCTCTCACATG+CGG 0.617111 7.4:+76920092 None:intergenic
CTCGCAGCGTCAAGCCACAA+AGG 0.619331 7.4:-76920436 MS.gene74058:CDS
TACCGAAAACAGTGTTAACA+GGG 0.619335 7.4:+76921525 None:intergenic
GGCATTCCTCCAGCTCCTCG+TGG 0.619607 7.4:-76919499 MS.gene74058:CDS
CTGGGTCTGGAAACTGCTGG+TGG 0.621439 7.4:-76919685 MS.gene74058:CDS
TCAGTAAAAGCAACATAAGA+CGG 0.621546 7.4:+76921596 None:intergenic
TTCAGAGTGACATGAAGTTG+TGG 0.623777 7.4:-76920647 MS.gene74058:CDS
ATTGAGTCCTGCAATGACAC+CGG 0.629941 7.4:+76920410 None:intergenic
TGGTGTTAACTACAAGGGTG+AGG 0.634934 7.4:-76920583 MS.gene74058:CDS
CTGCTGAGGACAAAACAACT+GGG 0.640141 7.4:-76919420 MS.gene74058:CDS
GGTGCTCCTGATATGGCTGG+TGG 0.645251 7.4:-76919043 MS.gene74058:CDS
GAAGTTCCTCCAGCAGCAGG+TGG 0.652201 7.4:-76919010 MS.gene74058:CDS
CAATTGACGCTGCAATTCAG+TGG 0.657113 7.4:-76919168 MS.gene74058:CDS
AAGATGGGTATCACCAGCAG+TGG 0.661313 7.4:+76920224 None:intergenic
ATGATTGGTGTTAACTACAA+GGG 0.664773 7.4:-76920588 MS.gene74058:CDS
GGAACACCACGAGGAGCTGG+AGG 0.670372 7.4:+76919493 None:intergenic
TGTCTTGATCCAAGTCTACG+AGG 0.670532 7.4:-76919575 MS.gene74058:CDS
GTCTTGATCCAAGTCTACGA+GGG 0.681033 7.4:-76919574 MS.gene74058:CDS
TAGACTTGGATCAAGACACC+GGG 0.682878 7.4:+76919580 None:intergenic
ACTTACTCAGACAATCAACC+CGG 0.685579 7.4:-76919598 MS.gene74058:CDS
CAAGAGTATCAACCCCGACG+AGG 0.690673 7.4:-76919806 MS.gene74058:CDS
TATCTTGAATGTCTCTGCTG+AGG 0.697510 7.4:-76919434 MS.gene74058:CDS
CATAAGCAACAGCCTCGTCG+GGG 0.699592 7.4:+76919794 None:intergenic
ATTGCTAAGATGTATCAAGG+TGG 0.733799 7.4:-76919067 MS.gene74058:CDS
GTGATTTGAGGAACACCACG+AGG 0.749532 7.4:+76919484 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAAAAAGTAATAAAATA+TGG - chr7.4:76919389-76919408 MS.gene74058:CDS 10.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr7.4:76919580-76919599 MS.gene74058:CDS 15.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr7.4:76919517-76919536 MS.gene74058:CDS 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr7.4:76919516-76919535 MS.gene74058:CDS 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr7.4:76919424-76919443 MS.gene74058:CDS 20.0%
!!! ATTTGTTTGTTTTTTTGAGT+TGG - chr7.4:76919737-76919756 MS.gene74058:CDS 20.0%
!!! TTTATTCTTGTTGATTAATG+AGG - chr7.4:76919669-76919688 MS.gene74058:CDS 20.0%
! AAACAAAGAATCAATCTCAA+TGG + chr7.4:76920657-76920676 None:intergenic 25.0%
! AAGTAAGGACTAAACTTAAA+AGG - chr7.4:76919595-76919614 MS.gene74058:CDS 25.0%
! AGGGCAAAAAAAACAAAATT+AGG - chr7.4:76919550-76919569 MS.gene74058:CDS 25.0%
! GGGCAAAAAAAACAAAATTA+GGG - chr7.4:76919551-76919570 MS.gene74058:CDS 25.0%
!! ATTTTGTTCAAGAGTTTAAG+AGG - chr7.4:76920531-76920550 MS.gene74058:CDS 25.0%
!!! AATGTGTTGATTTTTGACTT+GGG - chr7.4:76920392-76920411 MS.gene74058:CDS 25.0%
!!! TAAAAGGTCGCTATTTTATA+GGG - chr7.4:76919611-76919630 MS.gene74058:CDS 25.0%
!!! TTAAAAGGTCGCTATTTTAT+AGG - chr7.4:76919610-76919629 MS.gene74058:CDS 25.0%
!!! TTTGTTTTTTTGAGTTGGAT+TGG - chr7.4:76919742-76919761 MS.gene74058:CDS 25.0%
AAAACTATGCTTACAACATG+AGG - chr7.4:76921440-76921459 MS.gene74058:intron 30.0%
AAGAACAAGAAGGATATTAG+TGG - chr7.4:76920554-76920573 MS.gene74058:CDS 30.0%
ACAAGATTTCTTCAATGGAA+AGG - chr7.4:76920862-76920881 MS.gene74058:intron 30.0%
ACAATTAAAGACGAGAAGAT+TGG - chr7.4:76921466-76921485 MS.gene74058:intron 30.0%
ATCATTGCTAAGATGTATCA+AGG - chr7.4:76921628-76921647 MS.gene74058:CDS 30.0%
ATTAGATCCCTTACATTGAA+CGG - chr7.4:76919701-76919720 MS.gene74058:CDS 30.0%
CTGTTACAAGATTTCTTCAA+TGG - chr7.4:76920857-76920876 MS.gene74058:intron 30.0%
GATACATCTTAGCAATGATT+GGG + chr7.4:76921627-76921646 None:intergenic 30.0%
TAAGGAAGAAATTGAGAAGA+TGG - chr7.4:76921345-76921364 MS.gene74058:intron 30.0%
TCAGTAAAAGCAACATAAGA+CGG + chr7.4:76919105-76919124 None:intergenic 30.0%
TGAGTTTGAAGATAAGATGA+AGG - chr7.4:76921582-76921601 MS.gene74058:CDS 30.0%
TGATACATCTTAGCAATGAT+TGG + chr7.4:76921628-76921647 None:intergenic 30.0%
TGCTGAAGAAATTTCATCTA+TGG - chr7.4:76920151-76920170 MS.gene74058:CDS 30.0%
TTGTAGTTAACACCAATCAT+GGG + chr7.4:76920110-76920129 None:intergenic 30.0%
! AATCTTCTTTTTGTCATCAG+GGG + chr7.4:76921503-76921522 None:intergenic 30.0%
! CAATCTTCTTTTTGTCATCA+GGG + chr7.4:76921504-76921523 None:intergenic 30.0%
! GAGATTGATTCTTTGTTTGA+GGG - chr7.4:76920659-76920678 MS.gene74058:CDS 30.0%
! TAATCGACTTCTTCAATCTT+AGG + chr7.4:76921721-76921740 None:intergenic 30.0%
! TCAATCTTCTTTTTGTCATC+AGG + chr7.4:76921505-76921524 None:intergenic 30.0%
! TGAGATTGATTCTTTGTTTG+AGG - chr7.4:76920658-76920677 MS.gene74058:CDS 30.0%
! TTAGAAGTTTGTTTGCTCAT+TGG - chr7.4:76919960-76919979 MS.gene74058:CDS 30.0%
! TTGTTTGCTCATTGGTTATT+TGG - chr7.4:76919968-76919987 MS.gene74058:CDS 30.0%
!! ATGATTGGTGTTAACTACAA+GGG - chr7.4:76920110-76920129 MS.gene74058:CDS 30.0%
!! TGAAGATTTTGACAACAGAA+TGG - chr7.4:76920502-76920521 MS.gene74058:CDS 30.0%
!!! GAATGTGTTGATTTTTGACT+TGG - chr7.4:76920391-76920410 MS.gene74058:CDS 30.0%
!!! TTTTGAGTTGGATTGGAATA+TGG - chr7.4:76919749-76919768 MS.gene74058:CDS 30.0%
AAAATCTTCACCACCAAGAT+GGG + chr7.4:76920492-76920511 None:intergenic 35.0%
AAAGCTCAAATTTACCCAAC+AGG + chr7.4:76921177-76921196 None:intergenic 35.0%
ACAGATGCTAAACGTTTGAT+TGG - chr7.4:76920005-76920024 MS.gene74058:CDS 35.0%
AGAAATTGAGAAGATGGTTG+AGG - chr7.4:76921351-76921370 MS.gene74058:intron 35.0%
AGAGACATTCAAGATACCAT+TGG + chr7.4:76921260-76921279 None:intergenic 35.0%
AGATGAGGAACACAAAAAGA+AGG - chr7.4:76921396-76921415 MS.gene74058:intron 35.0%
ATCTTCTGCCTTGTATTTCT+CGG + chr7.4:76921380-76921399 None:intergenic 35.0%
ATGCTAAACGTTTGATTGGA+AGG - chr7.4:76920009-76920028 MS.gene74058:CDS 35.0%
ATTACTATCACCAACGACAA+AGG - chr7.4:76921313-76921332 MS.gene74058:intron 35.0%
ATTGCTAAGATGTATCAAGG+TGG - chr7.4:76921631-76921650 MS.gene74058:CDS 35.0%
CAGATTTGAGGAACTTAACA+TGG - chr7.4:76920712-76920731 MS.gene74058:intron 35.0%
CATGTTAAGTTCCTCAAATC+TGG + chr7.4:76920714-76920733 None:intergenic 35.0%
CTTGTAGTTAACACCAATCA+TGG + chr7.4:76920111-76920130 None:intergenic 35.0%
GAATTCACCGTTCAATGTAA+GGG + chr7.4:76919711-76919730 None:intergenic 35.0%
GTTCATGATGTTGTTCTTGT+TGG - chr7.4:76920803-76920822 MS.gene74058:intron 35.0%
GTTTAAGAGGAAGAACAAGA+AGG - chr7.4:76920544-76920563 MS.gene74058:CDS 35.0%
TACCGAAAACAGTGTTAACA+GGG + chr7.4:76919176-76919195 None:intergenic 35.0%
TCGCTTCTTACTATTGAAGA+GGG - chr7.4:76920434-76920453 MS.gene74058:CDS 35.0%
TGTAACAGTTGCTGAACTTT+GGG + chr7.4:76920845-76920864 None:intergenic 35.0%
TTACCGAAAACAGTGTTAAC+AGG + chr7.4:76919177-76919196 None:intergenic 35.0%
TTGGGTAAATTTGAGCTTTC+CGG - chr7.4:76921178-76921197 MS.gene74058:intron 35.0%
TTGTAACAGTTGCTGAACTT+TGG + chr7.4:76920846-76920865 None:intergenic 35.0%
! AACCCTGTTAACACTGTTTT+CGG - chr7.4:76919171-76919190 MS.gene74058:CDS 35.0%
! ACTGATAGTGAGAGATTGAT+CGG - chr7.4:76919120-76919139 MS.gene74058:CDS 35.0%
! GGATTTGTTCAGAAAGTGTA+TGG - chr7.4:76920733-76920752 MS.gene74058:intron 35.0%
! TCTCTCAAACACTTTTCAAC+AGG + chr7.4:76920761-76920780 None:intergenic 35.0%
!! AGAGGGTATCTTTGAAGTTA+AGG - chr7.4:76920451-76920470 MS.gene74058:CDS 35.0%
!! CATGATTGGTGTTAACTACA+AGG - chr7.4:76920109-76920128 MS.gene74058:CDS 35.0%
!!! GGTTCAAGATTTGTTGCTTT+TGG - chr7.4:76920973-76920992 MS.gene74058:intron 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG - chr7.4:76919427-76919446 MS.gene74058:CDS 35.0%
AAACCTTACCCCACTCAATT+CGG + chr7.4:76919807-76919826 None:intergenic 40.0%
ACTTACTCAGACAATCAACC+CGG - chr7.4:76921100-76921119 MS.gene74058:intron 40.0%
AGCTGAACCAAGATAAGCTT+CGG + chr7.4:76920201-76920220 None:intergenic 40.0%
AGGATATTAGTGGAAACCCT+AGG - chr7.4:76920564-76920583 MS.gene74058:CDS 40.0%
ATGCGGTTCTCAATCTTCTA+AGG + chr7.4:76920592-76920611 None:intergenic 40.0%
CAAAATCTTCACCACCAAGA+TGG + chr7.4:76920493-76920512 None:intergenic 40.0%
CACAACAATTCCAACCAAGA+AGG - chr7.4:76921063-76921082 MS.gene74058:intron 40.0%
CATGATGTTGTTCTTGTTGG+TGG - chr7.4:76920806-76920825 MS.gene74058:intron 40.0%
CGAATTCACCGTTCAATGTA+AGG + chr7.4:76919712-76919731 None:intergenic 40.0%
GAAATACAAGGCAGAAGATG+AGG - chr7.4:76921381-76921400 MS.gene74058:intron 40.0%
GGATATTAGTGGAAACCCTA+GGG - chr7.4:76920565-76920584 MS.gene74058:CDS 40.0%
GTAACAGTTGCTGAACTTTG+GGG + chr7.4:76920844-76920863 None:intergenic 40.0%
GTCGCTTCTTACTATTGAAG+AGG - chr7.4:76920433-76920452 MS.gene74058:CDS 40.0%
GTGTTTGAGAGATGCTAAGA+TGG - chr7.4:76920769-76920788 MS.gene74058:intron 40.0%
GTTGGAATTGTTGTGTTCCT+TGG + chr7.4:76921058-76921077 None:intergenic 40.0%
TAAGTTCCTCAAATCTGGCA+CGG + chr7.4:76920709-76920728 None:intergenic 40.0%
TATCTTGAATGTCTCTGCTG+AGG - chr7.4:76921264-76921283 MS.gene74058:intron 40.0%
TCATGACAGTTCTCATTCCA+AGG - chr7.4:76921038-76921057 MS.gene74058:intron 40.0%
TCGAAGCAAACTGTGATTTG+AGG + chr7.4:76921229-76921248 None:intergenic 40.0%
TGAGTAGGGACTAATACTCA+GGG - chr7.4:76919531-76919550 MS.gene74058:CDS 40.0%
TGCGGTTCTCAATCTTCTAA+GGG + chr7.4:76920591-76920610 None:intergenic 40.0%
TTCAGAGTGACATGAAGTTG+TGG - chr7.4:76920051-76920070 MS.gene74058:CDS 40.0%
TTGAGTAGGGACTAATACTC+AGG - chr7.4:76919530-76919549 MS.gene74058:CDS 40.0%
! AAAACTTGCTCCTTCTTGGT+TGG + chr7.4:76921076-76921095 None:intergenic 40.0%
! AGAGAAAACTTGCTCCTTCT+TGG + chr7.4:76921080-76921099 None:intergenic 40.0%
! CATGAAGTTGTGGCCTTTTA+AGG - chr7.4:76920061-76920080 MS.gene74058:CDS 40.0%
! GGTTGATGCAAAGAATGCTT+TGG - chr7.4:76921417-76921436 MS.gene74058:intron 40.0%
! TAGCAATGATTGGGTTGCAA+AGG + chr7.4:76921618-76921637 None:intergenic 40.0%
! TGCGTATGGTCTTGACAAAA+AGG - chr7.4:76920349-76920368 MS.gene74058:CDS 40.0%
!! GTACAAGCAGCTATTTTGAG+TGG - chr7.4:76920935-76920954 MS.gene74058:intron 40.0%
!! TTCTTGTTGGTGGTTCAACT+AGG - chr7.4:76920816-76920835 MS.gene74058:intron 40.0%
!!! GTGTTGATTTTTGACTTGGG+AGG - chr7.4:76920395-76920414 MS.gene74058:CDS 40.0%
!!! TTGATTTTTGACTTGGGAGG+TGG - chr7.4:76920398-76920417 MS.gene74058:CDS 40.0%
AAAGGAGAAGGTCCTGCAAT+CGG - chr7.4:76918988-76919007 MS.gene74058:CDS 45.0%
AACCAGAGACAACAACCTGT+TGG - chr7.4:76921159-76921178 MS.gene74058:intron 45.0%
AAGTTCCTCAAATCTGGCAC+GGG + chr7.4:76920708-76920727 None:intergenic 45.0%
ACCAGAGACAACAACCTGTT+GGG - chr7.4:76921160-76921179 MS.gene74058:intron 45.0%
AGACAACCTTCCTTTGTCGT+TGG + chr7.4:76921326-76921345 None:intergenic 45.0%
ATTGAGTCCTGCAATGACAC+CGG + chr7.4:76920291-76920310 None:intergenic 45.0%
CAATTGACGCTGCAATTCAG+TGG - chr7.4:76921530-76921549 MS.gene74058:CDS 45.0%
CCTGCAATCGGAATAGATCT+GGG - chr7.4:76919000-76919019 MS.gene74058:CDS 45.0%
CGACAAAGGAAGGTTGTCTA+AGG - chr7.4:76921327-76921346 MS.gene74058:intron 45.0%
CGTTCGGTTTCCTTGATCAT+TGG + chr7.4:76919079-76919098 None:intergenic 45.0%
CTATCACCAACGACAAAGGA+AGG - chr7.4:76921317-76921336 MS.gene74058:intron 45.0%
CTGCTGAGGACAAAACAACT+GGG - chr7.4:76921278-76921297 MS.gene74058:intron 45.0%
GAATTGAGTGGGGTAAGGTT+TGG - chr7.4:76919806-76919825 MS.gene74058:CDS 45.0%
GACAAAAAGGCGACAAGTGT+TGG - chr7.4:76920362-76920381 MS.gene74058:CDS 45.0%
GAGATCATCGCCAATGATCA+AGG - chr7.4:76919066-76919085 MS.gene74058:CDS 45.0%
GAGATTGCCGAAGCTTATCT+TGG - chr7.4:76920191-76920210 MS.gene74058:CDS 45.0%
GATGTCACTCCATTGTCTCT+GGG - chr7.4:76920995-76921014 MS.gene74058:intron 45.0%
GCTAAGATGTATCAAGGTGG+AGG - chr7.4:76921634-76921653 MS.gene74058:CDS 45.0%
GGACCAGCAGTAACCTTAAA+AGG + chr7.4:76920077-76920096 None:intergenic 45.0%
GTAGACTTGGATCAAGACAC+CGG + chr7.4:76921122-76921141 None:intergenic 45.0%
GTCTTGATCCAAGTCTACGA+GGG - chr7.4:76921124-76921143 MS.gene74058:intron 45.0%
TAGACTTGGATCAAGACACC+GGG + chr7.4:76921121-76921140 None:intergenic 45.0%
TCCTGCAATCGGAATAGATC+TGG - chr7.4:76918999-76919018 MS.gene74058:CDS 45.0%
TCTGCTGAGGACAAAACAAC+TGG - chr7.4:76921277-76921296 MS.gene74058:intron 45.0%
TGAGGAAGCCGAGAAATACA+AGG - chr7.4:76921369-76921388 MS.gene74058:intron 45.0%
TGCTTCGACATTGATGCCAA+TGG - chr7.4:76921241-76921260 MS.gene74058:intron 45.0%
TGTCTTGATCCAAGTCTACG+AGG - chr7.4:76921123-76921142 MS.gene74058:intron 45.0%
! TCAATCTTCTAAGGGCCCTA+GGG + chr7.4:76920583-76920602 None:intergenic 45.0%
! TGGTGTTAACTACAAGGGTG+AGG - chr7.4:76920115-76920134 MS.gene74058:CDS 45.0%
! TTTAAGGTTACTGCTGGTCC+TGG - chr7.4:76920077-76920096 MS.gene74058:CDS 45.0%
! TTTGAAGTTAAGGCCACTGC+TGG - chr7.4:76920461-76920480 MS.gene74058:CDS 45.0%
!! GCAGCTATTTTGAGTGGTGA+AGG - chr7.4:76920941-76920960 MS.gene74058:intron 45.0%
!!! TGGCCTTTTAAGGTTACTGC+TGG - chr7.4:76920071-76920090 MS.gene74058:CDS 45.0%
!! AATAAAAGTAAATATAATAT+AGG + chr7.4:76919655-76919674 None:intergenic 5.0%
!! ATAAAAGTAAATATAATATA+GGG + chr7.4:76919654-76919673 None:intergenic 5.0%
!!! TTTTTATATTGAAATTTAAT+TGG - chr7.4:76919932-76919951 MS.gene74058:CDS 5.0%
AAATCTGGCACGGGTGATTG+TGG + chr7.4:76920699-76920718 None:intergenic 50.0%
AAGATGGGTATCACCAGCAG+TGG + chr7.4:76920477-76920496 None:intergenic 50.0%
AATCACCCGTGCCAGATTTG+AGG - chr7.4:76920700-76920719 MS.gene74058:intron 50.0%
AATGACACCGGCATCCTTTG+TGG + chr7.4:76920279-76920298 None:intergenic 50.0%
ACCATAAGCAACAGCCTCGT+CGG + chr7.4:76920909-76920928 None:intergenic 50.0%
ACCCAACAGGTTGTTGTCTC+TGG + chr7.4:76921164-76921183 None:intergenic 50.0%
ACTGCTGCAGCTATTGCGTA+TGG - chr7.4:76920335-76920354 MS.gene74058:CDS 50.0%
ACTGCTGGTGATACCCATCT+TGG - chr7.4:76920476-76920495 MS.gene74058:CDS 50.0%
ATGTAGCCGACCGAATTGAG+TGG - chr7.4:76919794-76919813 MS.gene74058:CDS 50.0%
CAACATAAGACGGCGTCGTT+CGG + chr7.4:76919095-76919114 None:intergenic 50.0%
CATCGCGACCTGATTCTTAG+CGG + chr7.4:76919151-76919170 None:intergenic 50.0%
CCCAGATCTATTCCGATTGC+AGG + chr7.4:76919003-76919022 None:intergenic 50.0%
CCTGGTGAAAAGCCCATGAT+TGG - chr7.4:76920095-76920114 MS.gene74058:CDS 50.0%
CGTACTCGTGTGTTGGAGTA+TGG - chr7.4:76919028-76919047 MS.gene74058:CDS 50.0%
CTCTTTCACCCTCGTAGACT+TGG + chr7.4:76921135-76921154 None:intergenic 50.0%
CTTACCCCACTCAATTCGGT+CGG + chr7.4:76919803-76919822 None:intergenic 50.0%
GAGTGGTGAAGGCAACGAAA+AGG - chr7.4:76920952-76920971 MS.gene74058:intron 50.0%
GGAACAACGTACTCGTGTGT+TGG - chr7.4:76919021-76919040 MS.gene74058:CDS 50.0%
GGATGTCACTCCATTGTCTC+TGG - chr7.4:76920994-76921013 MS.gene74058:intron 50.0%
GTGATTTGAGGAACACCACG+AGG + chr7.4:76921217-76921236 None:intergenic 50.0%
GTGGTTGGACAGTAACCAGT+TGG - chr7.4:76921549-76921568 MS.gene74058:CDS 50.0%
GTTTCCAGACCCAGAGACAA+TGG + chr7.4:76921007-76921026 None:intergenic 50.0%
TACGCAATAGCTGCAGCAGT+TGG + chr7.4:76920335-76920354 None:intergenic 50.0%
TCCATACCACCAGCCATATC+AGG + chr7.4:76921664-76921683 None:intergenic 50.0%
TCCTGATATGGCTGGTGGTA+TGG - chr7.4:76921660-76921679 MS.gene74058:CDS 50.0%
TCTCTTCGCTCTCTCACATG+CGG + chr7.4:76920609-76920628 None:intergenic 50.0%
TGACGCTGCAATTCAGTGGT+TGG - chr7.4:76921534-76921553 MS.gene74058:CDS 50.0%
TGCGAGTCGTTGAAGTAAGC+TGG + chr7.4:76920248-76920267 None:intergenic 50.0%
TGTAGCCGACCGAATTGAGT+GGG - chr7.4:76919795-76919814 MS.gene74058:CDS 50.0%
! CCAATCATGGGCTTTTCACC+AGG + chr7.4:76920098-76920117 None:intergenic 50.0%
! CTCAATCTTCTAAGGGCCCT+AGG + chr7.4:76920584-76920603 None:intergenic 50.0%
! TGCAGGACCTTCTCCTTTTC+CGG + chr7.4:76918986-76919005 None:intergenic 50.0%
ACTCATCAGCCTCTGCCAAC+TGG + chr7.4:76921567-76921586 None:intergenic 55.0%
CACTCCATTGTCTCTGGGTC+TGG - chr7.4:76921000-76921019 MS.gene74058:intron 55.0%
CATAAGCAACAGCCTCGTCG+GGG + chr7.4:76920907-76920926 None:intergenic 55.0%
CCATAAGCAACAGCCTCGTC+GGG + chr7.4:76920908-76920927 None:intergenic 55.0%
CGACCGAATTGAGTGGGGTA+AGG - chr7.4:76919801-76919820 MS.gene74058:CDS 55.0%
CGGTGATGCCGCTAAGAATC+AGG - chr7.4:76919140-76919159 MS.gene74058:CDS 55.0%
CGTCAAGCCACAAAGGATGC+CGG - chr7.4:76920269-76920288 MS.gene74058:CDS 55.0%
GATGAAGTTCCTCCAGCAGC+AGG - chr7.4:76921685-76921704 MS.gene74058:CDS 55.0%
GCTGGTGATACCCATCTTGG+TGG - chr7.4:76920479-76920498 MS.gene74058:CDS 55.0%
GGACAGTAACCAGTTGGCAG+AGG - chr7.4:76921555-76921574 MS.gene74058:CDS 55.0%
GTAGCCGACCGAATTGAGTG+GGG - chr7.4:76919796-76919815 MS.gene74058:CDS 55.0%
TCTCTGGGTCTGGAAACTGC+TGG - chr7.4:76921010-76921029 MS.gene74058:intron 55.0%
!! AAGGATGCCGGTGTCATTGC+AGG - chr7.4:76920281-76920300 MS.gene74058:CDS 55.0%
!! AGGTGGAGGTGCTCCTGATA+TGG - chr7.4:76921648-76921667 MS.gene74058:CDS 55.0%
!! CAAGAGTATCAACCCCGACG+AGG - chr7.4:76920892-76920911 MS.gene74058:intron 55.0%
ACGAGGAGCTGGAGGAATGC+CGG + chr7.4:76921200-76921219 None:intergenic 60.0%
CTCGCAGCGTCAAGCCACAA+AGG - chr7.4:76920262-76920281 MS.gene74058:CDS 60.0%
CTGGGTCTGGAAACTGCTGG+TGG - chr7.4:76921013-76921032 MS.gene74058:intron 60.0%
GAAGTTCCTCCAGCAGCAGG+TGG - chr7.4:76921688-76921707 MS.gene74058:CDS 60.0%
GGTGCTCCTGATATGGCTGG+TGG - chr7.4:76921655-76921674 MS.gene74058:CDS 60.0%
TGAGGAACACCACGAGGAGC+TGG + chr7.4:76921211-76921230 None:intergenic 60.0%
! CCCGACGAGGCTGTTGCTTA+TGG - chr7.4:76920905-76920924 MS.gene74058:intron 60.0%
!! GGAGGTGCTCCTGATATGGC+TGG - chr7.4:76921652-76921671 MS.gene74058:CDS 60.0%
GGAACACCACGAGGAGCTGG+AGG + chr7.4:76921208-76921227 None:intergenic 65.0%
GGCATTCCTCCAGCTCCTCG+TGG - chr7.4:76921199-76921218 MS.gene74058:intron 65.0%
CCAGCACCACCTGCTGCTGG+AGG + chr7.4:76921697-76921716 None:intergenic 70.0%
CCTCCAGCAGCAGGTGGTGC+TGG - chr7.4:76921694-76921713 MS.gene74058:CDS 70.0%
GGACCAGCACCACCTGCTGC+TGG + chr7.4:76921700-76921719 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 76918979 76921741 76918979 ID=MS.gene74058
chr7.4 mRNA 76918979 76921741 76918979 ID=MS.gene74058.t1;Parent=MS.gene74058
chr7.4 exon 76921528 76921741 76921528 ID=MS.gene74058.t1.exon1;Parent=MS.gene74058.t1
chr7.4 CDS 76921528 76921741 76921528 ID=cds.MS.gene74058.t1;Parent=MS.gene74058.t1
chr7.4 exon 76918979 76920711 76918979 ID=MS.gene74058.t1.exon2;Parent=MS.gene74058.t1
chr7.4 CDS 76918979 76920711 76918979 ID=cds.MS.gene74058.t1;Parent=MS.gene74058.t1
Gene Sequence

>MS.gene74058

ATGTCCGGAAAAGGAGAAGGTCCTGCAATCGGAATAGATCTGGGAACAACGTACTCGTGTGTTGGAGTATGGCAACACGATCGTGTTGAGATCATCGCCAATGATCAAGGAAACCGAACGACGCCGTCTTATGTTGCTTTTACTGATAGTGAGAGATTGATCGGTGATGCCGCTAAGAATCAGGTCGCGATGAACCCTGTTAACACTGTTTTCGGTAAGATTTCGATTCTCAACATTCGCATTATTGTGATTTCATTGTTATATGTACTGCATTGATCTTGTTCAATTGAGATATTTGAACGATTTTTTTGAGACAAGATTATAACACTATGAAAGTTCGTTTACTACAATTTAGAATTTTCAGACATGAAATGAATTAAATATGAATTTTTTAAAACGACAAAAGTTAAAGATAAAAAGTAATAAAATATGGATGTAGAAATCAAATTTTGCGATAATTTTTTGCGGAGGAACTTTTAGTAATGTTCTAAACATGTGCAAAAAATTGTTCAAAAATTTAAGAGTTTAAGCATAAATTAAACAAATTTGAATTGAGTAGGGACTAATACTCAGGGCAAAAAAAACAAAATTAGGGACTAAAAATGCTATTAAAATTAAGTAAGGACTAAACTTAAAAGGTCGCTATTTTATAGGGACTAGAAACATAATTAACCCTATATTATATTTACTTTTATTCTTGTTGATTAATGAGGTTTAGAATAATTAGATCCCTTACATTGAACGGTGAATTCGTAGTCATTTGTTTGTTTTTTTGAGTTGGATTGGAATATGGTTTATAATGATAGAACTTGATCATGTAGCCGACCGAATTGAGTGGGGTAAGGTTTGGTTGTTGTTGATGATGAATGAGTCTGTGTCTTAATTAAATAGTATCATGCAAAAGATTGATTTAATATGATGATATTTGATAAGCTTGATTGTTGTTTATTTATTTTTTATATTGAAATTTAATTGGTTTATTTAGAAGTTTGTTTGCTCATTGGTTATTTGGATGTGTATGATAAAACAGATGCTAAACGTTTGATTGGAAGGAGAGTTTCTGATGCATCTGTTCAGAGTGACATGAAGTTGTGGCCTTTTAAGGTTACTGCTGGTCCTGGTGAAAAGCCCATGATTGGTGTTAACTACAAGGGTGAGGACAAGCAATTTGCTGCTGAAGAAATTTCATCTATGGTGCTCATGAAGATGCGTGAGATTGCCGAAGCTTATCTTGGTTCAGCTGTGAAGAATGCTGTTGTAACAGTTCCAGCTTACTTCAACGACTCGCAGCGTCAAGCCACAAAGGATGCCGGTGTCATTGCAGGACTCAATGTCATGAGAATTATCAATGAGCCAACTGCTGCAGCTATTGCGTATGGTCTTGACAAAAAGGCGACAAGTGTTGGCGAGAAGAATGTGTTGATTTTTGACTTGGGAGGTGGTACTTTTGATGTGTCGCTTCTTACTATTGAAGAGGGTATCTTTGAAGTTAAGGCCACTGCTGGTGATACCCATCTTGGTGGTGAAGATTTTGACAACAGAATGGTTAATCATTTTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATTAGTGGAAACCCTAGGGCCCTTAGAAGATTGAGAACCGCATGTGAGAGAGCGAAGAGAACTCTCTCATCTACTGCACAAACTACCATTGAGATTGATTCTTTGTTTGAGGGTGTTGATTTTTACACCACAATCACCCGTGCCAGATTTGAGGAACTTAACATGGATTTGTTCAGAAAGTGTATGGAGCCTGTTGAAAAGTGTTTGAGAGATGCTAAGATGGACAAGAACTCTGTTCATGATGTTGTTCTTGTTGGTGGTTCAACTAGGATCCCCAAAGTTCAGCAACTGTTACAAGATTTCTTCAATGGAAAGGAGCTATGCAAGAGTATCAACCCCGACGAGGCTGTTGCTTATGGTGCTGCTGTACAAGCAGCTATTTTGAGTGGTGAAGGCAACGAAAAGGTTCAAGATTTGTTGCTTTTGGATGTCACTCCATTGTCTCTGGGTCTGGAAACTGCTGGTGGTGTCATGACAGTTCTCATTCCAAGGAACACAACAATTCCAACCAAGAAGGAGCAAGTTTTCTCTACTTACTCAGACAATCAACCCGGTGTCTTGATCCAAGTCTACGAGGGTGAAAGAGCAAGAACCAGAGACAACAACCTGTTGGGTAAATTTGAGCTTTCCGGCATTCCTCCAGCTCCTCGTGGTGTTCCTCAAATCACAGTTTGCTTCGACATTGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAAACAACTGGGCAGAAGAACAAGATTACTATCACCAACGACAAAGGAAGGTTGTCTAAGGAAGAAATTGAGAAGATGGTTGAGGAAGCCGAGAAATACAAGGCAGAAGATGAGGAACACAAAAAGAAGGTTGATGCAAAGAATGCTTTGGAAAACTATGCTTACAACATGAGGAACACAATTAAAGACGAGAAGATTGGATCAAAGCTTTCCCCTGATGACAAAAAGAAGATTGATGATGCAATTGACGCTGCAATTCAGTGGTTGGACAGTAACCAGTTGGCAGAGGCTGATGAGTTTGAAGATAAGATGAAGGAACTTGAGAGCCTTTGCAACCCAATCATTGCTAAGATGTATCAAGGTGGAGGTGCTCCTGATATGGCTGGTGGTATGGATGATGAAGTTCCTCCAGCAGCAGGTGGTGCTGGTCCTAAGATTGAAGAAGTCGATTAA

Protein sequence

>MS.gene74058.t1

MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRVSDASVQSDMKLWPFKVTAGPGEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGSKLSPDDKKKIDDAIDAAIQWLDSNQLAEADEFEDKMKELESLCNPIIAKMYQGGGAPDMAGGMDDEVPPAAGGAGPKIEEVD