Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74060.t1 | XP_003621869.1 | 99.1 | 648 | 6 | 0 | 1 | 648 | 1 | 648 | 0.00E+00 | 1223.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74060.t1 | Q9LHA8 | 92.2 | 651 | 47 | 3 | 1 | 648 | 1 | 650 | 0.0e+00 | 1151.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74060.t1 | G7KWU8 | 99.1 | 648 | 6 | 0 | 1 | 648 | 1 | 648 | 0.0e+00 | 1223.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene74060 | MS.gene60613 | PPI |
MS.gene74060 | MS.gene62607 | PPI |
MS.gene74060 | MS.gene061126 | PPI |
MS.gene74060 | MS.gene006231 | PPI |
MS.gene02122 | MS.gene74060 | PPI |
MS.gene74060 | MS.gene49154 | PPI |
MS.gene74060 | MS.gene30654 | PPI |
MS.gene74060 | MS.gene040499 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74060.t1 | MTR_7g024390 | 99.074 | 648 | 6 | 0 | 1 | 648 | 1 | 648 | 0.0 | 1323 |
MS.gene74060.t1 | MTR_7g099680 | 93.837 | 649 | 39 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1259 |
MS.gene74060.t1 | MTR_7g024580 | 92.791 | 652 | 40 | 3 | 1 | 648 | 1 | 649 | 0.0 | 1242 |
MS.gene74060.t1 | MTR_4g063710 | 92.000 | 650 | 49 | 2 | 1 | 648 | 1 | 649 | 0.0 | 1223 |
MS.gene74060.t1 | MTR_4g063720 | 91.859 | 651 | 48 | 2 | 1 | 648 | 1 | 649 | 0.0 | 1221 |
MS.gene74060.t1 | MTR_4g130540 | 86.544 | 654 | 81 | 2 | 1 | 648 | 1 | 653 | 0.0 | 1149 |
MS.gene74060.t1 | MTR_6g033850 | 67.480 | 615 | 199 | 1 | 1 | 615 | 1 | 614 | 0.0 | 853 |
MS.gene74060.t1 | MTR_6g033760 | 67.045 | 616 | 202 | 1 | 1 | 616 | 1 | 615 | 0.0 | 842 |
MS.gene74060.t1 | MTR_7g025760 | 66.023 | 621 | 207 | 3 | 1 | 619 | 1 | 619 | 0.0 | 839 |
MS.gene74060.t1 | MTR_7g026030 | 65.862 | 621 | 207 | 4 | 1 | 619 | 1 | 618 | 0.0 | 833 |
MS.gene74060.t1 | MTR_2g017730 | 67.107 | 605 | 179 | 3 | 9 | 607 | 8 | 598 | 0.0 | 827 |
MS.gene74060.t1 | MTR_7g021440 | 65.528 | 615 | 208 | 3 | 1 | 613 | 1 | 613 | 0.0 | 824 |
MS.gene74060.t1 | MTR_2g038260 | 66.559 | 619 | 200 | 6 | 1 | 615 | 1 | 616 | 0.0 | 824 |
MS.gene74060.t1 | MTR_5g066800 | 64.490 | 628 | 208 | 4 | 1 | 615 | 1 | 626 | 0.0 | 823 |
MS.gene74060.t1 | MTR_2g032550 | 66.069 | 613 | 204 | 3 | 6 | 615 | 7 | 618 | 0.0 | 819 |
MS.gene74060.t1 | MTR_8g032650 | 65.862 | 621 | 207 | 4 | 1 | 619 | 1 | 618 | 0.0 | 816 |
MS.gene74060.t1 | MTR_7g025820 | 66.667 | 597 | 195 | 3 | 1 | 595 | 1 | 595 | 0.0 | 812 |
MS.gene74060.t1 | MTR_7g025720 | 64.734 | 621 | 214 | 4 | 1 | 619 | 1 | 618 | 0.0 | 810 |
MS.gene74060.t1 | MTR_7g451380 | 64.563 | 618 | 215 | 3 | 1 | 615 | 1 | 617 | 0.0 | 808 |
MS.gene74060.t1 | MTR_7g026110 | 63.695 | 617 | 218 | 5 | 1 | 615 | 1 | 613 | 0.0 | 805 |
MS.gene74060.t1 | MTR_7g025790 | 64.563 | 618 | 214 | 4 | 1 | 616 | 1 | 615 | 0.0 | 802 |
MS.gene74060.t1 | MTR_8g099945 | 65.147 | 614 | 208 | 4 | 7 | 618 | 36 | 645 | 0.0 | 799 |
MS.gene74060.t1 | MTR_8g099795 | 65.309 | 614 | 207 | 4 | 7 | 618 | 36 | 645 | 0.0 | 799 |
MS.gene74060.t1 | MTR_7g025620 | 64.918 | 610 | 209 | 4 | 1 | 608 | 1 | 607 | 0.0 | 799 |
MS.gene74060.t1 | MTR_7g024030 | 64.812 | 611 | 210 | 4 | 1 | 609 | 1 | 608 | 0.0 | 799 |
MS.gene74060.t1 | MTR_7g025630 | 64.251 | 621 | 203 | 6 | 1 | 619 | 1 | 604 | 0.0 | 791 |
MS.gene74060.t1 | MTR_7g026090 | 64.553 | 615 | 212 | 3 | 1 | 613 | 1 | 611 | 0.0 | 791 |
MS.gene74060.t1 | MTR_7g078190 | 64.000 | 625 | 216 | 7 | 1 | 619 | 1 | 622 | 0.0 | 789 |
MS.gene74060.t1 | MTR_7g029415 | 64.332 | 614 | 211 | 7 | 6 | 615 | 13 | 622 | 0.0 | 786 |
MS.gene74060.t1 | MTR_6g033870 | 63.099 | 626 | 224 | 3 | 2 | 621 | 3 | 627 | 0.0 | 786 |
MS.gene74060.t1 | MTR_2g022050 | 65.210 | 618 | 211 | 3 | 1 | 615 | 1 | 617 | 0.0 | 786 |
MS.gene74060.t1 | MTR_4g079590 | 63.502 | 611 | 218 | 4 | 1 | 608 | 1 | 609 | 0.0 | 785 |
MS.gene74060.t1 | MTR_7g025740 | 63.328 | 619 | 213 | 6 | 1 | 608 | 1 | 616 | 0.0 | 783 |
MS.gene74060.t1 | MTR_6g033955 | 62.460 | 626 | 229 | 2 | 1 | 621 | 1 | 625 | 0.0 | 781 |
MS.gene74060.t1 | MTR_7g025770 | 62.783 | 618 | 225 | 4 | 1 | 615 | 1 | 616 | 0.0 | 781 |
MS.gene74060.t1 | MTR_8g103930 | 62.124 | 631 | 206 | 7 | 1 | 616 | 1 | 613 | 0.0 | 779 |
MS.gene74060.t1 | MTR_7g011590 | 64.019 | 617 | 205 | 5 | 1 | 615 | 1 | 602 | 0.0 | 778 |
MS.gene74060.t1 | MTR_2g437440 | 63.107 | 618 | 206 | 4 | 1 | 615 | 1 | 599 | 0.0 | 777 |
MS.gene74060.t1 | MTR_7g078210 | 63.782 | 624 | 218 | 6 | 1 | 619 | 1 | 621 | 0.0 | 776 |
MS.gene74060.t1 | MTR_7g026170 | 63.328 | 619 | 220 | 6 | 1 | 615 | 1 | 616 | 0.0 | 776 |
MS.gene74060.t1 | MTR_6g033820 | 61.356 | 634 | 239 | 2 | 1 | 629 | 1 | 633 | 0.0 | 776 |
MS.gene74060.t1 | MTR_2g038270 | 61.146 | 628 | 228 | 7 | 1 | 615 | 1 | 625 | 0.0 | 764 |
MS.gene74060.t1 | MTR_7g026130 | 63.124 | 621 | 217 | 7 | 1 | 613 | 1 | 617 | 0.0 | 751 |
MS.gene74060.t1 | MTR_7g074460 | 62.783 | 618 | 208 | 4 | 1 | 616 | 1 | 598 | 0.0 | 751 |
MS.gene74060.t1 | MTR_2g032580 | 62.359 | 619 | 196 | 6 | 1 | 615 | 1 | 586 | 0.0 | 745 |
MS.gene74060.t1 | MTR_4g027145 | 59.905 | 631 | 234 | 8 | 1 | 615 | 1 | 628 | 0.0 | 737 |
MS.gene74060.t1 | MTR_7g026140 | 60.420 | 619 | 220 | 8 | 1 | 614 | 1 | 599 | 0.0 | 731 |
MS.gene74060.t1 | MTR_7g025260 | 62.478 | 573 | 211 | 3 | 49 | 619 | 21 | 591 | 0.0 | 724 |
MS.gene74060.t1 | MTR_1g017130 | 59.083 | 611 | 205 | 7 | 1 | 608 | 1 | 569 | 0.0 | 713 |
MS.gene74060.t1 | MTR_7g451360 | 58.937 | 621 | 190 | 7 | 1 | 617 | 1 | 560 | 0.0 | 702 |
MS.gene74060.t1 | MTR_6g033800 | 65.209 | 526 | 180 | 2 | 90 | 615 | 1 | 523 | 0.0 | 697 |
MS.gene74060.t1 | MTR_2g040260 | 83.000 | 400 | 66 | 1 | 1 | 400 | 1030 | 1427 | 0.0 | 689 |
MS.gene74060.t1 | MTR_2g040370 | 87.047 | 386 | 48 | 1 | 4 | 389 | 1024 | 1407 | 0.0 | 689 |
MS.gene74060.t1 | MTR_2g040370 | 85.195 | 385 | 54 | 2 | 4 | 387 | 1408 | 1790 | 0.0 | 652 |
MS.gene74060.t1 | MTR_2g040370 | 87.047 | 386 | 48 | 1 | 4 | 389 | 1024 | 1407 | 0.0 | 689 |
MS.gene74060.t1 | MTR_2g040370 | 85.233 | 386 | 54 | 2 | 4 | 388 | 1408 | 1791 | 0.0 | 654 |
MS.gene74060.t1 | MTR_2g040160 | 82.500 | 400 | 68 | 1 | 1 | 400 | 1101 | 1498 | 0.0 | 677 |
MS.gene74060.t1 | MTR_7g007000 | 56.704 | 619 | 217 | 7 | 1 | 614 | 1 | 573 | 0.0 | 674 |
MS.gene74060.t1 | MTR_7g035155 | 56.149 | 618 | 212 | 7 | 1 | 615 | 1 | 562 | 0.0 | 663 |
MS.gene74060.t1 | MTR_4g063720 | 89.315 | 365 | 33 | 3 | 287 | 648 | 217 | 578 | 0.0 | 652 |
MS.gene74060.t1 | MTR_4g063720 | 91.964 | 224 | 18 | 0 | 1 | 224 | 1 | 224 | 1.35e-144 | 432 |
MS.gene74060.t1 | MTR_2g040220 | 73.128 | 454 | 104 | 4 | 1 | 436 | 1010 | 1463 | 0.0 | 652 |
MS.gene74060.t1 | MTR_2g040220 | 56.872 | 211 | 34 | 4 | 446 | 648 | 1397 | 1558 | 1.66e-55 | 205 |
MS.gene74060.t1 | MTR_1g041565 | 55.700 | 614 | 195 | 10 | 6 | 615 | 2 | 542 | 0.0 | 645 |
MS.gene74060.t1 | MTR_2g040350 | 79.449 | 399 | 76 | 3 | 6 | 400 | 1035 | 1431 | 0.0 | 645 |
MS.gene74060.t1 | MTR_2g040350 | 79.449 | 399 | 76 | 3 | 6 | 400 | 817 | 1213 | 0.0 | 644 |
MS.gene74060.t1 | MTR_2g032160 | 73.333 | 375 | 98 | 1 | 1 | 373 | 1 | 375 | 0.0 | 582 |
MS.gene74060.t1 | MTR_2g032160 | 43.434 | 99 | 55 | 1 | 519 | 616 | 365 | 463 | 9.25e-13 | 71.2 |
MS.gene74060.t1 | MTR_2g010020 | 52.422 | 578 | 248 | 10 | 10 | 580 | 58 | 615 | 0.0 | 567 |
MS.gene74060.t1 | MTR_2g010020 | 52.422 | 578 | 248 | 10 | 10 | 580 | 57 | 614 | 0.0 | 567 |
MS.gene74060.t1 | MTR_4g092920 | 51.903 | 578 | 252 | 9 | 10 | 578 | 54 | 614 | 0.0 | 560 |
MS.gene74060.t1 | MTR_2g005690 | 47.649 | 638 | 296 | 12 | 10 | 637 | 72 | 681 | 0.0 | 533 |
MS.gene74060.t1 | MTR_6g034005 | 49.360 | 547 | 254 | 8 | 80 | 615 | 2 | 536 | 1.05e-166 | 494 |
MS.gene74060.t1 | MTR_4g092920 | 51.911 | 497 | 214 | 8 | 90 | 578 | 1 | 480 | 3.98e-164 | 481 |
MS.gene74060.t1 | MTR_1g077230 | 74.823 | 282 | 69 | 1 | 1 | 280 | 1 | 282 | 1.44e-152 | 442 |
MS.gene74060.t1 | MTR_4g088515 | 55.814 | 430 | 102 | 7 | 9 | 436 | 276 | 619 | 5.32e-146 | 437 |
MS.gene74060.t1 | MTR_6g033810 | 59.337 | 332 | 85 | 3 | 86 | 415 | 8 | 291 | 3.04e-126 | 375 |
MS.gene74060.t1 | MTR_7g026050 | 51.872 | 374 | 151 | 3 | 243 | 615 | 1 | 346 | 4.69e-126 | 377 |
MS.gene74060.t1 | MTR_7g026080 | 71.138 | 246 | 69 | 1 | 1 | 244 | 1 | 246 | 1.54e-122 | 364 |
MS.gene74060.t1 | MTR_6g033855 | 52.493 | 381 | 93 | 5 | 86 | 464 | 8 | 302 | 4.52e-120 | 360 |
MS.gene74060.t1 | MTR_2g040355 | 47.289 | 461 | 82 | 10 | 187 | 646 | 2 | 302 | 6.02e-110 | 333 |
MS.gene74060.t1 | MTR_2g031670 | 69.778 | 225 | 66 | 1 | 21 | 243 | 43 | 267 | 1.86e-108 | 331 |
MS.gene74060.t1 | MTR_2g031670 | 74.627 | 67 | 16 | 1 | 342 | 408 | 275 | 340 | 2.43e-21 | 96.3 |
MS.gene74060.t1 | MTR_5g006180 | 35.388 | 503 | 284 | 11 | 9 | 494 | 29 | 507 | 1.13e-88 | 287 |
MS.gene74060.t1 | MTR_1g077240 | 54.545 | 297 | 125 | 4 | 320 | 615 | 1 | 288 | 4.20e-88 | 276 |
MS.gene74060.t1 | MTR_2g102180 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 3.28e-84 | 283 |
MS.gene74060.t1 | MTR_4g012050 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 5.31e-83 | 279 |
MS.gene74060.t1 | MTR_1207s0010 | 71.591 | 176 | 49 | 1 | 106 | 281 | 1 | 175 | 1.07e-81 | 256 |
MS.gene74060.t1 | MTR_5g097190 | 54.545 | 253 | 66 | 4 | 4 | 254 | 153 | 358 | 1.21e-79 | 257 |
MS.gene74060.t1 | MTR_6g478100 | 60.849 | 212 | 69 | 2 | 36 | 247 | 10 | 207 | 7.78e-79 | 253 |
MS.gene74060.t1 | MTR_6g478100 | 40.000 | 95 | 56 | 1 | 515 | 608 | 208 | 302 | 1.87e-12 | 69.3 |
MS.gene74060.t1 | MTR_5g092570 | 34.660 | 427 | 270 | 4 | 10 | 430 | 4 | 427 | 1.81e-76 | 260 |
MS.gene74060.t1 | MTR_3g051300 | 33.333 | 420 | 275 | 4 | 10 | 428 | 4 | 419 | 1.14e-75 | 258 |
MS.gene74060.t1 | MTR_5g090110 | 33.874 | 493 | 273 | 13 | 9 | 482 | 28 | 486 | 5.96e-74 | 247 |
MS.gene74060.t1 | MTR_4g115780 | 34.774 | 509 | 306 | 10 | 9 | 496 | 140 | 643 | 7.50e-70 | 240 |
MS.gene74060.t1 | MTR_5g005870 | 41.718 | 326 | 178 | 5 | 265 | 587 | 35 | 351 | 3.09e-68 | 228 |
MS.gene74060.t1 | MTR_4g107920 | 32.143 | 504 | 307 | 14 | 10 | 496 | 21 | 506 | 1.22e-67 | 231 |
MS.gene74060.t1 | MTR_3g081170 | 27.947 | 526 | 334 | 13 | 10 | 498 | 27 | 544 | 1.09e-57 | 209 |
MS.gene74060.t1 | MTR_6g033910 | 47.186 | 231 | 59 | 4 | 72 | 300 | 19 | 188 | 2.19e-55 | 187 |
MS.gene74060.t1 | MTR_1g116250 | 44.364 | 275 | 110 | 5 | 342 | 615 | 56 | 288 | 1.11e-54 | 188 |
MS.gene74060.t1 | MTR_7g074540 | 48.756 | 201 | 102 | 1 | 416 | 616 | 1 | 200 | 1.88e-54 | 185 |
MS.gene74060.t1 | MTR_7g026180 | 75.630 | 119 | 29 | 0 | 74 | 192 | 21 | 139 | 2.84e-53 | 186 |
MS.gene74060.t1 | MTR_7g026180 | 35.023 | 217 | 108 | 4 | 401 | 615 | 144 | 329 | 6.78e-28 | 115 |
MS.gene74060.t1 | MTR_7g451390 | 49.180 | 183 | 91 | 2 | 436 | 617 | 10 | 191 | 4.07e-48 | 167 |
MS.gene74060.t1 | MTR_2g017710 | 43.077 | 260 | 63 | 6 | 223 | 480 | 17 | 193 | 5.35e-48 | 170 |
MS.gene74060.t1 | MTR_5g005890 | 38.326 | 227 | 89 | 4 | 72 | 297 | 5 | 181 | 1.32e-42 | 152 |
MS.gene74060.t1 | MTR_1g068900 | 51.316 | 152 | 66 | 4 | 426 | 573 | 23 | 170 | 3.98e-38 | 139 |
MS.gene74060.t1 | MTR_6g033805 | 76.056 | 71 | 17 | 0 | 1 | 71 | 1 | 71 | 7.75e-32 | 118 |
MS.gene74060.t1 | MTR_4g027235 | 73.333 | 75 | 18 | 1 | 1 | 73 | 1 | 75 | 4.36e-30 | 113 |
MS.gene74060.t1 | MTR_4g027085 | 73.333 | 75 | 18 | 1 | 1 | 73 | 1 | 75 | 4.36e-30 | 113 |
MS.gene74060.t1 | MTR_7g026190 | 57.447 | 94 | 31 | 2 | 286 | 379 | 9 | 93 | 7.17e-28 | 112 |
MS.gene74060.t1 | MTR_7g026190 | 39.496 | 119 | 69 | 2 | 498 | 616 | 94 | 209 | 1.67e-15 | 76.3 |
MS.gene74060.t1 | MTR_2g040375 | 76.667 | 60 | 14 | 0 | 398 | 457 | 51 | 110 | 6.84e-23 | 94.7 |
MS.gene74060.t1 | MTR_4g115860 | 46.739 | 92 | 49 | 0 | 396 | 487 | 29 | 120 | 2.23e-22 | 93.2 |
MS.gene74060.t1 | MTR_6g033815 | 54.930 | 71 | 32 | 0 | 524 | 594 | 1 | 71 | 2.44e-20 | 87.0 |
MS.gene74060.t1 | MTR_7g021430 | 52.000 | 75 | 36 | 0 | 213 | 287 | 1 | 75 | 1.96e-18 | 84.3 |
MS.gene74060.t1 | MTR_7g026095 | 45.652 | 92 | 50 | 0 | 482 | 573 | 256 | 347 | 3.12e-18 | 87.0 |
MS.gene74060.t1 | MTR_7g026095 | 50.000 | 88 | 28 | 2 | 86 | 173 | 189 | 260 | 8.46e-17 | 82.8 |
MS.gene74060.t1 | MTR_7g026160 | 37.500 | 120 | 49 | 4 | 296 | 389 | 72 | 191 | 2.79e-12 | 67.4 |
MS.gene74060.t1 | MTR_6g033995 | 53.226 | 62 | 21 | 2 | 1 | 60 | 1 | 56 | 8.82e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74060.t1 | AT5G02500 | 91.551 | 651 | 52 | 1 | 1 | 648 | 1 | 651 | 0.0 | 1230 |
MS.gene74060.t1 | AT3G12580 | 93.241 | 651 | 40 | 3 | 1 | 648 | 1 | 650 | 0.0 | 1229 |
MS.gene74060.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1225 |
MS.gene74060.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1225 |
MS.gene74060.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1225 |
MS.gene74060.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1225 |
MS.gene74060.t1 | AT5G02490 | 89.893 | 653 | 61 | 2 | 1 | 648 | 1 | 653 | 0.0 | 1203 |
MS.gene74060.t1 | AT1G56410 | 87.884 | 619 | 73 | 1 | 1 | 619 | 1 | 617 | 0.0 | 1127 |
MS.gene74060.t1 | AT1G16030 | 83.385 | 650 | 102 | 3 | 1 | 648 | 1 | 646 | 0.0 | 1120 |
MS.gene74060.t1 | AT5G42020 | 64.904 | 624 | 212 | 5 | 7 | 627 | 35 | 654 | 0.0 | 829 |
MS.gene74060.t1 | AT5G42020 | 64.904 | 624 | 212 | 5 | 7 | 627 | 40 | 659 | 0.0 | 827 |
MS.gene74060.t1 | AT5G28540 | 65.472 | 614 | 206 | 4 | 7 | 618 | 35 | 644 | 0.0 | 824 |
MS.gene74060.t1 | AT1G09080 | 63.132 | 613 | 221 | 3 | 7 | 618 | 40 | 648 | 0.0 | 787 |
MS.gene74060.t1 | AT1G09080 | 63.132 | 613 | 221 | 3 | 7 | 618 | 50 | 658 | 0.0 | 786 |
MS.gene74060.t1 | AT5G02500 | 93.655 | 394 | 25 | 0 | 1 | 394 | 1 | 394 | 0.0 | 777 |
MS.gene74060.t1 | AT5G02500 | 77.206 | 136 | 28 | 1 | 516 | 648 | 386 | 521 | 4.07e-57 | 202 |
MS.gene74060.t1 | AT5G42020 | 58.974 | 624 | 194 | 10 | 7 | 627 | 35 | 599 | 0.0 | 701 |
MS.gene74060.t1 | AT5G09590 | 52.768 | 578 | 247 | 9 | 10 | 580 | 60 | 618 | 0.0 | 560 |
MS.gene74060.t1 | AT4G24280 | 49.349 | 614 | 285 | 11 | 10 | 617 | 81 | 674 | 0.0 | 541 |
MS.gene74060.t1 | AT5G49910 | 48.644 | 627 | 295 | 11 | 10 | 628 | 81 | 688 | 0.0 | 539 |
MS.gene74060.t1 | AT4G37910 | 51.903 | 578 | 252 | 9 | 10 | 578 | 55 | 615 | 0.0 | 532 |
MS.gene74060.t1 | AT4G37910 | 51.903 | 578 | 252 | 9 | 10 | 578 | 55 | 615 | 0.0 | 532 |
MS.gene74060.t1 | AT1G79930 | 29.468 | 733 | 416 | 14 | 10 | 648 | 4 | 729 | 6.04e-91 | 300 |
MS.gene74060.t1 | AT2G32120 | 34.961 | 512 | 305 | 9 | 9 | 508 | 30 | 525 | 2.98e-90 | 291 |
MS.gene74060.t1 | AT2G32120 | 34.961 | 512 | 305 | 9 | 9 | 508 | 30 | 525 | 2.98e-90 | 291 |
MS.gene74060.t1 | AT1G79930 | 29.059 | 733 | 419 | 15 | 10 | 648 | 4 | 729 | 8.59e-89 | 293 |
MS.gene74060.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.36e-86 | 286 |
MS.gene74060.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.91e-86 | 286 |
MS.gene74060.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.91e-86 | 286 |
MS.gene74060.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.91e-86 | 286 |
MS.gene74060.t1 | AT1G11660 | 26.975 | 671 | 411 | 10 | 10 | 619 | 4 | 656 | 3.00e-83 | 278 |
MS.gene74060.t1 | AT1G11660 | 26.975 | 671 | 411 | 10 | 10 | 619 | 4 | 656 | 3.00e-83 | 278 |
MS.gene74060.t1 | AT1G11660 | 26.975 | 671 | 411 | 10 | 10 | 619 | 4 | 656 | 3.00e-83 | 278 |
MS.gene74060.t1 | AT1G11660 | 27.044 | 636 | 385 | 10 | 45 | 619 | 2 | 619 | 3.77e-75 | 255 |
MS.gene74060.t1 | AT4G16660 | 25.874 | 715 | 418 | 18 | 5 | 612 | 46 | 755 | 1.13e-61 | 221 |
MS.gene74060.t1 | AT4G16660 | 25.734 | 715 | 419 | 18 | 5 | 612 | 22 | 731 | 2.87e-61 | 219 |
Find 150 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGGAAAATTTGAGCTTTC+CGG | 0.183269 | 7.4:-76911758 | MS.gene74060:CDS |
GGATGTCACTCCATTGTCTT+TGG | 0.187672 | 7.4:-76911942 | MS.gene74060:CDS |
GGTTCAAGATTTGTTGCTTT+TGG | 0.209433 | 7.4:-76911963 | MS.gene74060:CDS |
TAATCGACTTCTTCAATCTT+AGG | 0.220026 | 7.4:+76911218 | None:intergenic |
AGAGAAAACTTGCTCCTTCT+TGG | 0.262011 | 7.4:+76911859 | None:intergenic |
TGCAATAGTTGTTGAACTTT+GGG | 0.278727 | 7.4:+76912094 | None:intergenic |
GTTCATGATGTTGTTCTTGT+TGG | 0.297305 | 7.4:-76912133 | MS.gene74060:CDS |
TTACCGAAAACGGTGTTAAC+AGG | 0.308664 | 7.4:+76913614 | None:intergenic |
CGTTCGGTTTCCTTGATCAT+TGG | 0.309046 | 7.4:+76913712 | None:intergenic |
TGCTGAAGAAATTTCATCTA+TGG | 0.318039 | 7.4:-76912785 | MS.gene74060:CDS |
GGACCAGCAGTAACCTTAAA+AGG | 0.319176 | 7.4:+76912862 | None:intergenic |
TTGCAATAGTTGTTGAACTT+TGG | 0.322813 | 7.4:+76912093 | None:intergenic |
TGATACATCTTAGCAATGAT+TGG | 0.323430 | 7.4:+76911311 | None:intergenic |
GATGTCACTCCATTGTCTTT+GGG | 0.328461 | 7.4:-76911941 | MS.gene74060:CDS |
CATACTCGTGTGTTGGAGTA+TGG | 0.336614 | 7.4:-76913760 | MS.gene74060:CDS |
TCCCAACAAGTTGTTGTCTC+TGG | 0.342182 | 7.4:+76911775 | None:intergenic |
CTCTCTCACCTTCATAAACT+TGG | 0.342869 | 7.4:+76911804 | None:intergenic |
CCATAAGCAACTGCCTCGTC+TGG | 0.352445 | 7.4:+76912031 | None:intergenic |
CATCCTTTGTGGCTTGACGC+TGG | 0.360560 | 7.4:+76912671 | None:intergenic |
AAGGATGCCGGTGTTATTGC+TGG | 0.363539 | 7.4:-76912655 | MS.gene74060:CDS |
GTTGGAATTGTTGTGTTCCT+TGG | 0.367995 | 7.4:+76911881 | None:intergenic |
ACAGATGCTAAACGTTTGAT+TGG | 0.381796 | 7.4:-76912931 | MS.gene74060:intron |
ATCCTTTGTGGCTTGACGCT+GGG | 0.389762 | 7.4:+76912672 | None:intergenic |
AGAGGGTATCTTTGAAGTTA+AGG | 0.389960 | 7.4:-76912485 | MS.gene74060:CDS |
CCTCCAGCAGCAGGTGGTGC+TGG | 0.395029 | 7.4:-76911242 | MS.gene74060:CDS |
TGCGTATGGTCTTGACAAAA+AGG | 0.402154 | 7.4:-76912587 | MS.gene74060:CDS |
TCCATACCACCAGCCATATC+AGG | 0.402194 | 7.4:+76911275 | None:intergenic |
CCAGACGAGGCAGTTGCTTA+TGG | 0.403652 | 7.4:-76912031 | MS.gene74060:CDS |
CTATTGCAAGATTTCTTCAA+TGG | 0.409474 | 7.4:-76912079 | MS.gene74060:CDS |
GAGATTGCTGAAGCTTATCT+TGG | 0.410104 | 7.4:-76912745 | MS.gene74060:CDS |
GGTTGATGCAAAGAATGCTT+TGG | 0.410300 | 7.4:-76911519 | MS.gene74060:CDS |
TGAGATTGATTCTTTGTTTG+AGG | 0.412145 | 7.4:-76912278 | MS.gene74060:CDS |
ACCTGCGATTGGAATAGATC+TGG | 0.413445 | 7.4:-76913789 | MS.gene74060:CDS |
AGGTGGAGGTGCTCCTGATA+TGG | 0.414427 | 7.4:-76911288 | MS.gene74060:CDS |
CGACAAAGGAAGGTTGTCTA+AGG | 0.418046 | 7.4:-76911609 | MS.gene74060:CDS |
GGATTTGTTCAGAAAGTGTA+TGG | 0.424572 | 7.4:-76912203 | MS.gene74060:CDS |
ACAATTAAAGATGAGAAGAT+TGG | 0.425467 | 7.4:-76911470 | MS.gene74060:CDS |
TCCTGATATGGCTGGTGGTA+TGG | 0.425793 | 7.4:-76911276 | MS.gene74060:CDS |
CTTGTAGTTAACACCAATCA+TGG | 0.433031 | 7.4:+76912828 | None:intergenic |
CATGATGTTGTTCTTGTTGG+TGG | 0.435475 | 7.4:-76912130 | MS.gene74060:CDS |
CAACATAAGACGGCGTCGTT+CGG | 0.436894 | 7.4:+76913696 | None:intergenic |
TCTCTCAAACACTTCTCAAC+AGG | 0.442304 | 7.4:+76912178 | None:intergenic |
TTTAAGGTTACTGCTGGTCC+TGG | 0.442913 | 7.4:-76912859 | MS.gene74060:CDS |
GATACATCTTAGCAATGATT+GGG | 0.442977 | 7.4:+76911312 | None:intergenic |
GCAAGATTTCTTCAATGGTA+AGG | 0.455182 | 7.4:-76912074 | MS.gene74060:CDS |
CTCAATCTCCTAAGGGCCCT+AGG | 0.455669 | 7.4:+76912355 | None:intergenic |
AATAACACCGGCATCCTTTG+TGG | 0.457869 | 7.4:+76912660 | None:intergenic |
AAAACTTGCTCCTTCTTGGT+TGG | 0.457926 | 7.4:+76911863 | None:intergenic |
TCTGCTGAAGACAAAACAAC+TGG | 0.462288 | 7.4:-76911659 | MS.gene74060:CDS |
TAAGGAAGAAATTGAGAAGA+TGG | 0.466344 | 7.4:-76911591 | MS.gene74060:CDS |
CCATCAACAATGGCCGGAAA+AGG | 0.467610 | 7.4:-76913818 | None:intergenic |
AACCAGAGACAACAACTTGT+TGG | 0.470053 | 7.4:-76911777 | MS.gene74060:CDS |
ACTCATCAGCCTCTGCCAAC+TGG | 0.471841 | 7.4:+76911372 | None:intergenic |
GTGGTAACCCTAGGGCCCTT+AGG | 0.473088 | 7.4:-76912363 | MS.gene74060:CDS |
TTCTTGTTGGTGGTTCAACT+AGG | 0.473139 | 7.4:-76912120 | MS.gene74060:CDS |
CGGTGATGCTGCTAAGAATC+AGG | 0.474840 | 7.4:-76913648 | MS.gene74060:CDS |
GGACCAGCACCACCTGCTGC+TGG | 0.476038 | 7.4:+76911239 | None:intergenic |
ACTGCTGGTGATACTCATCT+TGG | 0.479477 | 7.4:-76912460 | MS.gene74060:CDS |
TTTGAAGTTAAGGCCACTGC+TGG | 0.480129 | 7.4:-76912475 | MS.gene74060:CDS |
ATGCGGTTCTCAATCTCCTA+AGG | 0.480661 | 7.4:+76912347 | None:intergenic |
GAGATTGATTCTTTGTTTGA+GGG | 0.481259 | 7.4:-76912277 | MS.gene74060:CDS |
GAGTGGTGAAGGCAATGAAA+AGG | 0.481276 | 7.4:-76911984 | MS.gene74060:CDS |
AAGAACAAGAAGGATATTAG+TGG | 0.486274 | 7.4:-76912382 | MS.gene74060:CDS |
TTGCTGGTTTGAATGTTATG+AGG | 0.486524 | 7.4:-76912639 | MS.gene74060:CDS |
ACCAGAGACAACAACTTGTT+GGG | 0.487350 | 7.4:-76911776 | MS.gene74060:CDS |
CCTTCCTTTGTCGTTGGTGA+TGG | 0.494022 | 7.4:+76911619 | None:intergenic |
GAGATCATCGCCAATGATCA+AGG | 0.498452 | 7.4:-76913722 | MS.gene74060:CDS |
GGAGGTGCTCCTGATATGGC+TGG | 0.498862 | 7.4:-76911284 | MS.gene74060:CDS |
ACGGGGAGCTGGAGGAATGC+CGG | 0.501984 | 7.4:+76911739 | None:intergenic |
TGAGGAACACCACGGGGAGC+TGG | 0.503287 | 7.4:+76911728 | None:intergenic |
AGAAATTGAGAAGATGGTTG+AGG | 0.504892 | 7.4:-76911585 | MS.gene74060:CDS |
AATCACCCGTGCTAGGTTTG+AGG | 0.506158 | 7.4:-76912236 | MS.gene74060:CDS |
TCTTTGGGTCTTGAAACTGC+TGG | 0.506314 | 7.4:-76911926 | MS.gene74060:CDS |
TGACGCTGCAATTCAGTGGT+TGG | 0.507402 | 7.4:-76911402 | MS.gene74060:CDS |
ATCATTGCTAAGATGTATCA+AGG | 0.508198 | 7.4:-76911308 | MS.gene74060:CDS |
ATGCTAAACGTTTGATTGGA+AGG | 0.508528 | 7.4:-76912927 | MS.gene74060:CDS |
TCGAAACAAACTGTGATTTG+AGG | 0.509328 | 7.4:+76911710 | None:intergenic |
AATCGAAATCTTACCGAAAA+CGG | 0.511172 | 7.4:+76913604 | None:intergenic |
GATGAAGTTCCTCCAGCAGC+AGG | 0.518012 | 7.4:-76911251 | MS.gene74060:CDS |
GTGTTTGAGAGATGCTAAGA+TGG | 0.518945 | 7.4:-76912167 | MS.gene74060:CDS |
AAACAAAGAATCAATCTCAA+TGG | 0.529138 | 7.4:+76912282 | None:intergenic |
CATGATTGGTGTTAACTACA+AGG | 0.531338 | 7.4:-76912827 | MS.gene74060:CDS |
TTGAATCCATCAACAATGGC+CGG | 0.536348 | 7.4:-76913824 | None:intergenic |
CCCAGATCTATTCCAATCGC+AGG | 0.536734 | 7.4:+76913788 | None:intergenic |
AGGATATTAGTGGTAACCCT+AGG | 0.539421 | 7.4:-76912372 | MS.gene74060:CDS |
TGAGTTTGAAGATAAGATGA+AGG | 0.542099 | 7.4:-76911354 | MS.gene74060:CDS |
AAAGGTGAAGGACCTGCGAT+TGG | 0.542152 | 7.4:-76913800 | MS.gene74060:CDS |
GCTGGTGATACTCATCTTGG+TGG | 0.543324 | 7.4:-76912457 | MS.gene74060:CDS |
CGTCAAGCCACAAAGGATGC+CGG | 0.544853 | 7.4:-76912667 | MS.gene74060:CDS |
ACACCACAATCACCCGTGCT+AGG | 0.544924 | 7.4:-76912243 | MS.gene74060:CDS |
AGACAACCTTCCTTTGTCGT+TGG | 0.545078 | 7.4:+76911613 | None:intergenic |
CCTGGTGAAAAGCCCATGAT+TGG | 0.545365 | 7.4:-76912841 | MS.gene74060:CDS |
ACTGATAGTGAACGATTGAT+CGG | 0.545823 | 7.4:-76913668 | MS.gene74060:CDS |
GAAATACAAGGCAGAAGATG+AGG | 0.548776 | 7.4:-76911555 | MS.gene74060:CDS |
AAACCTAGCACGGGTGATTG+TGG | 0.557012 | 7.4:+76912240 | None:intergenic |
TGGGAGTCGTTGAAGTAAGC+TGG | 0.557282 | 7.4:+76912691 | None:intergenic |
TAGCAATGATTGGGTTGCAA+AGG | 0.559904 | 7.4:+76911321 | None:intergenic |
TTATGACAGTTCTCATTCCA+AGG | 0.560782 | 7.4:-76911898 | MS.gene74060:CDS |
GTCTCTTCTTACTATTGAAG+AGG | 0.563002 | 7.4:-76912503 | MS.gene74060:CDS |
ACTGCTGCAGCTATTGCGTA+TGG | 0.564673 | 7.4:-76912601 | MS.gene74060:CDS |
CCTGCGATTGGAATAGATCT+GGG | 0.566168 | 7.4:-76913788 | MS.gene74060:CDS |
GTTTAAGAGGAAGAACAAGA+AGG | 0.567567 | 7.4:-76912392 | MS.gene74060:CDS |
CATAAGCAACTGCCTCGTCT+GGG | 0.573791 | 7.4:+76912032 | None:intergenic |
CACAACAATTCCAACCAAGA+AGG | 0.576868 | 7.4:-76911873 | MS.gene74060:CDS |
TCAATCTCCTAAGGGCCCTA+GGG | 0.578568 | 7.4:+76912356 | None:intergenic |
TGCGGTTCTCAATCTCCTAA+GGG | 0.579664 | 7.4:+76912348 | None:intergenic |
GGACAGTAACCAGTTGGCAG+AGG | 0.580101 | 7.4:-76911381 | MS.gene74060:CDS |
GTCTTGATCCAAGTTTATGA+AGG | 0.581559 | 7.4:-76911812 | MS.gene74060:CDS |
TAAGTTCCTCAAACCTAGCA+CGG | 0.587266 | 7.4:+76912230 | None:intergenic |
TCTCTTCTTACTATTGAAGA+GGG | 0.590747 | 7.4:-76912502 | MS.gene74060:CDS |
GGAACAACATACTCGTGTGT+TGG | 0.592871 | 7.4:-76913767 | MS.gene74060:CDS |
CCAGCACCACCTGCTGCTGG+AGG | 0.596593 | 7.4:+76911242 | None:intergenic |
TAGGTTTGAGGAACTTAACA+TGG | 0.598737 | 7.4:-76912224 | MS.gene74060:CDS |
CCATCACCAACGACAAAGGA+AGG | 0.602128 | 7.4:-76911619 | MS.gene74060:CDS |
GCTAAGATGTATCAAGGTGG+AGG | 0.602520 | 7.4:-76911302 | MS.gene74060:CDS |
GTTTCAAGACCCAAAGACAA+TGG | 0.603037 | 7.4:+76911932 | None:intergenic |
TTGGGTCTTGAAACTGCTGG+TGG | 0.603246 | 7.4:-76911923 | MS.gene74060:CDS |
AAAACTATGCTTACAACATG+AGG | 0.603991 | 7.4:-76911496 | MS.gene74060:CDS |
TGTTTCGACATTGATGCCAA+CGG | 0.605203 | 7.4:-76911695 | MS.gene74060:CDS |
ACAATGGCCGGAAAAGGTGA+AGG | 0.606509 | 7.4:-76913812 | MS.gene74060:CDS |
GTGGTTGGACAGTAACCAGT+TGG | 0.608307 | 7.4:-76911387 | MS.gene74060:CDS |
AAGTTCCTCAAACCTAGCAC+GGG | 0.609404 | 7.4:+76912231 | None:intergenic |
TTGTAGTTAACACCAATCAT+GGG | 0.609538 | 7.4:+76912829 | None:intergenic |
TGTGATTTGAGGAACACCAC+GGG | 0.611264 | 7.4:+76911721 | None:intergenic |
TACCGAAAACGGTGTTAACA+GGG | 0.612530 | 7.4:+76913615 | None:intergenic |
ATTACCATCACCAACGACAA+AGG | 0.613058 | 7.4:-76911623 | MS.gene74060:CDS |
CTCCCAGCGTCAAGCCACAA+AGG | 0.614910 | 7.4:-76912674 | MS.gene74060:CDS |
TCTCTTCGCTCTCTCACATG+CGG | 0.617111 | 7.4:+76912330 | None:intergenic |
TCAGTAAAAGCAACATAAGA+CGG | 0.621546 | 7.4:+76913686 | None:intergenic |
TTCAGAGTGACATGAAGTTG+TGG | 0.623777 | 7.4:-76912885 | MS.gene74060:CDS |
GGATATTAGTGGTAACCCTA+GGG | 0.625986 | 7.4:-76912371 | MS.gene74060:CDS |
TGGATCAAAGCTTTCACCAG+AGG | 0.630537 | 7.4:-76911450 | MS.gene74060:CDS |
GGAACACCACGGGGAGCTGG+AGG | 0.631612 | 7.4:+76911731 | None:intergenic |
TGGTGTTAACTACAAGGGTG+AGG | 0.634934 | 7.4:-76912821 | MS.gene74060:CDS |
AGAGACATTCAAGATACCGT+TGG | 0.636371 | 7.4:+76911679 | None:intergenic |
TGAGGAAGCAGAGAAATACA+AGG | 0.640542 | 7.4:-76911567 | MS.gene74060:CDS |
GGTGCTCCTGATATGGCTGG+TGG | 0.645251 | 7.4:-76911281 | MS.gene74060:CDS |
CAAGAGTATCAACCCAGACG+AGG | 0.648278 | 7.4:-76912044 | MS.gene74060:CDS |
GAAGTTCCTCCAGCAGCAGG+TGG | 0.652201 | 7.4:-76911248 | MS.gene74060:CDS |
CAATTGACGCTGCAATTCAG+TGG | 0.657113 | 7.4:-76911406 | MS.gene74060:CDS |
AAGATGAGTATCACCAGCAG+TGG | 0.661313 | 7.4:+76912462 | None:intergenic |
ATGATTGGTGTTAACTACAA+GGG | 0.664773 | 7.4:-76912826 | MS.gene74060:CDS |
CTGTGATTTGAGGAACACCA+CGG | 0.668774 | 7.4:+76911720 | None:intergenic |
TACGCAATAGCTGCAGCAGT+AGG | 0.677506 | 7.4:+76912604 | None:intergenic |
TAAACTTGGATCAAGACACC+AGG | 0.678843 | 7.4:+76911818 | None:intergenic |
ATTCAAACCAGCAATAACAC+CGG | 0.680140 | 7.4:+76912648 | None:intergenic |
GGCATTCCTCCAGCTCCCCG+TGG | 0.680342 | 7.4:-76911737 | MS.gene74060:CDS |
ACTTACTCAGACAATCAACC+TGG | 0.684536 | 7.4:-76911836 | MS.gene74060:CDS |
ATTGCTAAGATGTATCAAGG+TGG | 0.733799 | 7.4:-76911305 | MS.gene74060:CDS |
GTGATTTGAGGAACACCACG+GGG | 0.760451 | 7.4:+76911722 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAATAAATAATTAATCTA+GGG | - | chr7.4:76911564-76911583 | MS.gene74060:CDS | 10.0% |
!! | TGAAAATAAATAATTAATCT+AGG | - | chr7.4:76911563-76911582 | MS.gene74060:CDS | 10.0% |
!! | TTTATAATGATAGAACATTA+TGG | - | chr7.4:76911864-76911883 | MS.gene74060:CDS | 15.0% |
!! | GATACTATTTAATTAAGACA+CGG | + | chr7.4:76911936-76911955 | None:intergenic | 20.0% |
!!! | AATGTGTTGATTTTTGATTT+GGG | - | chr7.4:76912482-76912501 | MS.gene74060:CDS | 20.0% |
!!! | ATTTGTTTGTTTTTTTGAGT+TGG | - | chr7.4:76911829-76911848 | MS.gene74060:CDS | 20.0% |
! | AAACAAAGAATCAATCTCAA+TGG | + | chr7.4:76912747-76912766 | None:intergenic | 25.0% |
! | ACAATTAAAGATGAGAAGAT+TGG | - | chr7.4:76913556-76913575 | MS.gene74060:intron | 25.0% |
! | AGAATAATTAGATCACTTAC+AGG | - | chr7.4:76911779-76911798 | MS.gene74060:CDS | 25.0% |
!! | AATGGTTAATCATTTTGTTC+AGG | - | chr7.4:76912610-76912629 | MS.gene74060:CDS | 25.0% |
!! | TTTATTCTTGTTGATTACTG+AGG | - | chr7.4:76911753-76911772 | MS.gene74060:CDS | 25.0% |
!!! | AATTAATCTAGGGTTTTATC+TGG | - | chr7.4:76911574-76911593 | MS.gene74060:CDS | 25.0% |
!!! | GAATGTGTTGATTTTTGATT+TGG | - | chr7.4:76912481-76912500 | MS.gene74060:CDS | 25.0% |
!!! | TGAAGATTTTGATAACAGAA+TGG | - | chr7.4:76912592-76912611 | MS.gene74060:CDS | 25.0% |
!!! | TTTGTTTTTTTGAGTTGGAT+TGG | - | chr7.4:76911834-76911853 | MS.gene74060:CDS | 25.0% |
AAAACTATGCTTACAACATG+AGG | - | chr7.4:76913530-76913549 | MS.gene74060:intron | 30.0% | |
AAGAACAAGAAGGATATTAG+TGG | - | chr7.4:76912644-76912663 | MS.gene74060:CDS | 30.0% | |
AATCGAAATCTTACCGAAAA+CGG | + | chr7.4:76911425-76911444 | None:intergenic | 30.0% | |
ATCATTGCTAAGATGTATCA+AGG | - | chr7.4:76913718-76913737 | MS.gene74060:CDS | 30.0% | |
ATGGTGTAATTTGATCATGT+AGG | - | chr7.4:76911883-76911902 | MS.gene74060:CDS | 30.0% | |
CTATTGCAAGATTTCTTCAA+TGG | - | chr7.4:76912947-76912966 | MS.gene74060:intron | 30.0% | |
GATACATCTTAGCAATGATT+GGG | + | chr7.4:76913717-76913736 | None:intergenic | 30.0% | |
GTAATTTGATCATGTAGGTT+TGG | - | chr7.4:76911888-76911907 | MS.gene74060:CDS | 30.0% | |
TAAGGAAGAAATTGAGAAGA+TGG | - | chr7.4:76913435-76913454 | MS.gene74060:intron | 30.0% | |
TCAGTAAAAGCAACATAAGA+CGG | + | chr7.4:76911343-76911362 | None:intergenic | 30.0% | |
TCTCTTCTTACTATTGAAGA+GGG | - | chr7.4:76912524-76912543 | MS.gene74060:CDS | 30.0% | |
TGAGTTTGAAGATAAGATGA+AGG | - | chr7.4:76913672-76913691 | MS.gene74060:CDS | 30.0% | |
TGATACATCTTAGCAATGAT+TGG | + | chr7.4:76913718-76913737 | None:intergenic | 30.0% | |
TGCAATAGTTGTTGAACTTT+GGG | + | chr7.4:76912935-76912954 | None:intergenic | 30.0% | |
TGCTGAAGAAATTTCATCTA+TGG | - | chr7.4:76912241-76912260 | MS.gene74060:CDS | 30.0% | |
TTGCAATAGTTGTTGAACTT+TGG | + | chr7.4:76912936-76912955 | None:intergenic | 30.0% | |
TTGTAGTTAACACCAATCAT+GGG | + | chr7.4:76912200-76912219 | None:intergenic | 30.0% | |
! | ATTTTGTTCAGGAGTTTAAG+AGG | - | chr7.4:76912621-76912640 | MS.gene74060:CDS | 30.0% |
! | GAGATTGATTCTTTGTTTGA+GGG | - | chr7.4:76912749-76912768 | MS.gene74060:CDS | 30.0% |
! | TAATCGACTTCTTCAATCTT+AGG | + | chr7.4:76913811-76913830 | None:intergenic | 30.0% |
! | TGAGATTGATTCTTTGTTTG+AGG | - | chr7.4:76912748-76912767 | MS.gene74060:CDS | 30.0% |
! | TTAGAAGTTTGTTTGCTCAT+TGG | - | chr7.4:76912050-76912069 | MS.gene74060:CDS | 30.0% |
! | TTGTTTGCTCATTGGTTATT+TGG | - | chr7.4:76912058-76912077 | MS.gene74060:CDS | 30.0% |
!! | ATGATTGGTGTTAACTACAA+GGG | - | chr7.4:76912200-76912219 | MS.gene74060:CDS | 30.0% |
!!! | TTTTGAGTTGGATTGGAATA+TGG | - | chr7.4:76911841-76911860 | MS.gene74060:CDS | 30.0% |
ACAGATGCTAAACGTTTGAT+TGG | - | chr7.4:76912095-76912114 | MS.gene74060:CDS | 35.0% | |
AGAAATTGAGAAGATGGTTG+AGG | - | chr7.4:76913441-76913460 | MS.gene74060:intron | 35.0% | |
AGATGAGGAACACAAAAAGA+AGG | - | chr7.4:76913486-76913505 | MS.gene74060:intron | 35.0% | |
ATGCTAAACGTTTGATTGGA+AGG | - | chr7.4:76912099-76912118 | MS.gene74060:CDS | 35.0% | |
ATTCAAACCAGCAATAACAC+CGG | + | chr7.4:76912381-76912400 | None:intergenic | 35.0% | |
ATTGCTAAGATGTATCAAGG+TGG | - | chr7.4:76913721-76913740 | MS.gene74060:CDS | 35.0% | |
CTTGTAGTTAACACCAATCA+TGG | + | chr7.4:76912201-76912220 | None:intergenic | 35.0% | |
GCAAGATTTCTTCAATGGTA+AGG | - | chr7.4:76912952-76912971 | MS.gene74060:intron | 35.0% | |
GTCTCTTCTTACTATTGAAG+AGG | - | chr7.4:76912523-76912542 | MS.gene74060:CDS | 35.0% | |
GTCTTGATCCAAGTTTATGA+AGG | - | chr7.4:76913214-76913233 | MS.gene74060:intron | 35.0% | |
GTTCATGATGTTGTTCTTGT+TGG | - | chr7.4:76912893-76912912 | MS.gene74060:CDS | 35.0% | |
GTTTAAGAGGAAGAACAAGA+AGG | - | chr7.4:76912634-76912653 | MS.gene74060:CDS | 35.0% | |
TAGGTTTGAGGAACTTAACA+TGG | - | chr7.4:76912802-76912821 | MS.gene74060:CDS | 35.0% | |
TCGAAACAAACTGTGATTTG+AGG | + | chr7.4:76913319-76913338 | None:intergenic | 35.0% | |
TTATGACAGTTCTCATTCCA+AGG | - | chr7.4:76913128-76913147 | MS.gene74060:intron | 35.0% | |
TTGGGAAAATTTGAGCTTTC+CGG | - | chr7.4:76913268-76913287 | MS.gene74060:intron | 35.0% | |
! | ACTGATAGTGAACGATTGAT+CGG | - | chr7.4:76911358-76911377 | MS.gene74060:CDS | 35.0% |
! | GGATTTGTTCAGAAAGTGTA+TGG | - | chr7.4:76912823-76912842 | MS.gene74060:CDS | 35.0% |
! | TCAATCTTCTTTTTGTCCTC+TGG | + | chr7.4:76913595-76913614 | None:intergenic | 35.0% |
!! | AGAGGGTATCTTTGAAGTTA+AGG | - | chr7.4:76912541-76912560 | MS.gene74060:CDS | 35.0% |
!! | CATGATTGGTGTTAACTACA+AGG | - | chr7.4:76912199-76912218 | MS.gene74060:CDS | 35.0% |
!! | TTGCTGGTTTGAATGTTATG+AGG | - | chr7.4:76912387-76912406 | MS.gene74060:CDS | 35.0% |
!!! | GGTTCAAGATTTGTTGCTTT+TGG | - | chr7.4:76913063-76913082 | MS.gene74060:intron | 35.0% |
!!! | GTGTTGATTTTTGATTTGGG+AGG | - | chr7.4:76912485-76912504 | MS.gene74060:CDS | 35.0% |
!!! | TTGATTTTTGATTTGGGAGG+TGG | - | chr7.4:76912488-76912507 | MS.gene74060:CDS | 35.0% |
AACCAGAGACAACAACTTGT+TGG | - | chr7.4:76913249-76913268 | MS.gene74060:intron | 40.0% | |
ACTTACTCAGACAATCAACC+TGG | - | chr7.4:76913190-76913209 | MS.gene74060:intron | 40.0% | |
AGAGACATTCAAGATACCGT+TGG | + | chr7.4:76913350-76913369 | None:intergenic | 40.0% | |
AGGATATTAGTGGTAACCCT+AGG | - | chr7.4:76912654-76912673 | MS.gene74060:CDS | 40.0% | |
ATTACCATCACCAACGACAA+AGG | - | chr7.4:76913403-76913422 | MS.gene74060:intron | 40.0% | |
CACAACAATTCCAACCAAGA+AGG | - | chr7.4:76913153-76913172 | MS.gene74060:intron | 40.0% | |
CATGATGTTGTTCTTGTTGG+TGG | - | chr7.4:76912896-76912915 | MS.gene74060:CDS | 40.0% | |
CTCTCTCACCTTCATAAACT+TGG | + | chr7.4:76913225-76913244 | None:intergenic | 40.0% | |
GAAATACAAGGCAGAAGATG+AGG | - | chr7.4:76913471-76913490 | MS.gene74060:intron | 40.0% | |
GAGATTGCTGAAGCTTATCT+TGG | - | chr7.4:76912281-76912300 | MS.gene74060:CDS | 40.0% | |
GATGTCACTCCATTGTCTTT+GGG | - | chr7.4:76913085-76913104 | MS.gene74060:intron | 40.0% | |
GGATATTAGTGGTAACCCTA+GGG | - | chr7.4:76912655-76912674 | MS.gene74060:CDS | 40.0% | |
GTGTTTGAGAGATGCTAAGA+TGG | - | chr7.4:76912859-76912878 | MS.gene74060:CDS | 40.0% | |
GTTGGAATTGTTGTGTTCCT+TGG | + | chr7.4:76913148-76913167 | None:intergenic | 40.0% | |
GTTTCAAGACCCAAAGACAA+TGG | + | chr7.4:76913097-76913116 | None:intergenic | 40.0% | |
TAAACTTGGATCAAGACACC+AGG | + | chr7.4:76913211-76913230 | None:intergenic | 40.0% | |
TAAGTTCCTCAAACCTAGCA+CGG | + | chr7.4:76912799-76912818 | None:intergenic | 40.0% | |
TCTCTCAAACACTTCTCAAC+AGG | + | chr7.4:76912851-76912870 | None:intergenic | 40.0% | |
TCTGCTGAAGACAAAACAAC+TGG | - | chr7.4:76913367-76913386 | MS.gene74060:intron | 40.0% | |
TGAGGAAGCAGAGAAATACA+AGG | - | chr7.4:76913459-76913478 | MS.gene74060:intron | 40.0% | |
TGTTTCGACATTGATGCCAA+CGG | - | chr7.4:76913331-76913350 | MS.gene74060:intron | 40.0% | |
TTCAGAGTGACATGAAGTTG+TGG | - | chr7.4:76912141-76912160 | MS.gene74060:CDS | 40.0% | |
! | AAAACTTGCTCCTTCTTGGT+TGG | + | chr7.4:76913166-76913185 | None:intergenic | 40.0% |
! | AACCCTGTTAACACCGTTTT+CGG | - | chr7.4:76911409-76911428 | MS.gene74060:CDS | 40.0% |
! | ACCAGAGACAACAACTTGTT+GGG | - | chr7.4:76913250-76913269 | MS.gene74060:intron | 40.0% |
! | AGAGAAAACTTGCTCCTTCT+TGG | + | chr7.4:76913170-76913189 | None:intergenic | 40.0% |
! | CATGAAGTTGTGGCCTTTTA+AGG | - | chr7.4:76912151-76912170 | MS.gene74060:CDS | 40.0% |
! | GGTTGATGCAAAGAATGCTT+TGG | - | chr7.4:76913507-76913526 | MS.gene74060:intron | 40.0% |
! | TACCGAAAACGGTGTTAACA+GGG | + | chr7.4:76911414-76911433 | None:intergenic | 40.0% |
! | TAGCAATGATTGGGTTGCAA+AGG | + | chr7.4:76913708-76913727 | None:intergenic | 40.0% |
! | TGCGTATGGTCTTGACAAAA+AGG | - | chr7.4:76912439-76912458 | MS.gene74060:CDS | 40.0% |
! | TTACCGAAAACGGTGTTAAC+AGG | + | chr7.4:76911415-76911434 | None:intergenic | 40.0% |
!! | GTACAAGCAGCTATTTTGAG+TGG | - | chr7.4:76913025-76913044 | MS.gene74060:intron | 40.0% |
!! | TTCTTGTTGGTGGTTCAACT+AGG | - | chr7.4:76912906-76912925 | MS.gene74060:CDS | 40.0% |
AAGATGAGTATCACCAGCAG+TGG | + | chr7.4:76912567-76912586 | None:intergenic | 45.0% | |
AAGTTCCTCAAACCTAGCAC+GGG | + | chr7.4:76912798-76912817 | None:intergenic | 45.0% | |
AATAACACCGGCATCCTTTG+TGG | + | chr7.4:76912369-76912388 | None:intergenic | 45.0% | |
ACCTGCGATTGGAATAGATC+TGG | - | chr7.4:76911237-76911256 | MS.gene74060:CDS | 45.0% | |
ACTGCTGGTGATACTCATCT+TGG | - | chr7.4:76912566-76912585 | MS.gene74060:CDS | 45.0% | |
AGACAACCTTCCTTTGTCGT+TGG | + | chr7.4:76913416-76913435 | None:intergenic | 45.0% | |
ATGCGGTTCTCAATCTCCTA+AGG | + | chr7.4:76912682-76912701 | None:intergenic | 45.0% | |
CAATTGACGCTGCAATTCAG+TGG | - | chr7.4:76913620-76913639 | MS.gene74060:CDS | 45.0% | |
CATACTCGTGTGTTGGAGTA+TGG | - | chr7.4:76911266-76911285 | MS.gene74060:CDS | 45.0% | |
CCTGCGATTGGAATAGATCT+GGG | - | chr7.4:76911238-76911257 | MS.gene74060:CDS | 45.0% | |
CGACAAAGGAAGGTTGTCTA+AGG | - | chr7.4:76913417-76913436 | MS.gene74060:intron | 45.0% | |
CGTTCGGTTTCCTTGATCAT+TGG | + | chr7.4:76911317-76911336 | None:intergenic | 45.0% | |
CTGTGATTTGAGGAACACCA+CGG | + | chr7.4:76913309-76913328 | None:intergenic | 45.0% | |
GAGATCATCGCCAATGATCA+AGG | - | chr7.4:76911304-76911323 | MS.gene74060:CDS | 45.0% | |
GAGTGGTGAAGGCAATGAAA+AGG | - | chr7.4:76913042-76913061 | MS.gene74060:intron | 45.0% | |
GCTAAGATGTATCAAGGTGG+AGG | - | chr7.4:76913724-76913743 | MS.gene74060:CDS | 45.0% | |
GGAACAACATACTCGTGTGT+TGG | - | chr7.4:76911259-76911278 | MS.gene74060:CDS | 45.0% | |
GGACCAGCAGTAACCTTAAA+AGG | + | chr7.4:76912167-76912186 | None:intergenic | 45.0% | |
GGATGTCACTCCATTGTCTT+TGG | - | chr7.4:76913084-76913103 | MS.gene74060:intron | 45.0% | |
TCCCAACAAGTTGTTGTCTC+TGG | + | chr7.4:76913254-76913273 | None:intergenic | 45.0% | |
TCTTTGGGTCTTGAAACTGC+TGG | - | chr7.4:76913100-76913119 | MS.gene74060:intron | 45.0% | |
TGCGGTTCTCAATCTCCTAA+GGG | + | chr7.4:76912681-76912700 | None:intergenic | 45.0% | |
TGGATCAAAGCTTTCACCAG+AGG | - | chr7.4:76913576-76913595 | MS.gene74060:intron | 45.0% | |
TGTGATTTGAGGAACACCAC+GGG | + | chr7.4:76913308-76913327 | None:intergenic | 45.0% | |
! | TGGTGTTAACTACAAGGGTG+AGG | - | chr7.4:76912205-76912224 | MS.gene74060:CDS | 45.0% |
! | TTTAAGGTTACTGCTGGTCC+TGG | - | chr7.4:76912167-76912186 | MS.gene74060:CDS | 45.0% |
! | TTTGAAGTTAAGGCCACTGC+TGG | - | chr7.4:76912551-76912570 | MS.gene74060:CDS | 45.0% |
!! | GCAGCTATTTTGAGTGGTGA+AGG | - | chr7.4:76913031-76913050 | MS.gene74060:intron | 45.0% |
!!! | TGGCCTTTTAAGGTTACTGC+TGG | - | chr7.4:76912161-76912180 | MS.gene74060:CDS | 45.0% |
!!! | TTTTTATATTGAAATTTAAT+TGG | - | chr7.4:76912022-76912041 | MS.gene74060:CDS | 5.0% |
AAACCTAGCACGGGTGATTG+TGG | + | chr7.4:76912789-76912808 | None:intergenic | 50.0% | |
AAAGGTGAAGGACCTGCGAT+TGG | - | chr7.4:76911226-76911245 | MS.gene74060:CDS | 50.0% | |
AATCACCCGTGCTAGGTTTG+AGG | - | chr7.4:76912790-76912809 | MS.gene74060:CDS | 50.0% | |
ACTGCTGCAGCTATTGCGTA+TGG | - | chr7.4:76912425-76912444 | MS.gene74060:CDS | 50.0% | |
ATCCTTTGTGGCTTGACGCT+GGG | + | chr7.4:76912357-76912376 | None:intergenic | 50.0% | |
CAACATAAGACGGCGTCGTT+CGG | + | chr7.4:76911333-76911352 | None:intergenic | 50.0% | |
CATAAGCAACTGCCTCGTCT+GGG | + | chr7.4:76912997-76913016 | None:intergenic | 50.0% | |
CCATCACCAACGACAAAGGA+AGG | - | chr7.4:76913407-76913426 | MS.gene74060:intron | 50.0% | |
CCCAGATCTATTCCAATCGC+AGG | + | chr7.4:76911241-76911260 | None:intergenic | 50.0% | |
CCTGGTGAAAAGCCCATGAT+TGG | - | chr7.4:76912185-76912204 | MS.gene74060:CDS | 50.0% | |
CGGTGATGCTGCTAAGAATC+AGG | - | chr7.4:76911378-76911397 | MS.gene74060:CDS | 50.0% | |
GACAAAAAGGCGACGAGTGT+TGG | - | chr7.4:76912452-76912471 | MS.gene74060:CDS | 50.0% | |
GCTGGTGATACTCATCTTGG+TGG | - | chr7.4:76912569-76912588 | MS.gene74060:CDS | 50.0% | |
GTGATTTGAGGAACACCACG+GGG | + | chr7.4:76913307-76913326 | None:intergenic | 50.0% | |
GTGGTTGGACAGTAACCAGT+TGG | - | chr7.4:76913639-76913658 | MS.gene74060:CDS | 50.0% | |
TACGCAATAGCTGCAGCAGT+AGG | + | chr7.4:76912425-76912444 | None:intergenic | 50.0% | |
TCAATCTCCTAAGGGCCCTA+GGG | + | chr7.4:76912673-76912692 | None:intergenic | 50.0% | |
TCCATACCACCAGCCATATC+AGG | + | chr7.4:76913754-76913773 | None:intergenic | 50.0% | |
TCCTGATATGGCTGGTGGTA+TGG | - | chr7.4:76913750-76913769 | MS.gene74060:CDS | 50.0% | |
TCTCTTCGCTCTCTCACATG+CGG | + | chr7.4:76912699-76912718 | None:intergenic | 50.0% | |
TGACGCTGCAATTCAGTGGT+TGG | - | chr7.4:76913624-76913643 | MS.gene74060:CDS | 50.0% | |
TGGGAGTCGTTGAAGTAAGC+TGG | + | chr7.4:76912338-76912357 | None:intergenic | 50.0% | |
TTGGGTCTTGAAACTGCTGG+TGG | - | chr7.4:76913103-76913122 | MS.gene74060:intron | 50.0% | |
! | CCAATCATGGGCTTTTCACC+AGG | + | chr7.4:76912188-76912207 | None:intergenic | 50.0% |
! | CCTTCCTTTGTCGTTGGTGA+TGG | + | chr7.4:76913410-76913429 | None:intergenic | 50.0% |
!! | AAGGATGCCGGTGTTATTGC+TGG | - | chr7.4:76912371-76912390 | MS.gene74060:CDS | 50.0% |
!! | CAAGAGTATCAACCCAGACG+AGG | - | chr7.4:76912982-76913001 | MS.gene74060:intron | 50.0% |
ACACCACAATCACCCGTGCT+AGG | - | chr7.4:76912783-76912802 | MS.gene74060:CDS | 55.0% | |
ACTCATCAGCCTCTGCCAAC+TGG | + | chr7.4:76913657-76913676 | None:intergenic | 55.0% | |
CATCCTTTGTGGCTTGACGC+TGG | + | chr7.4:76912358-76912377 | None:intergenic | 55.0% | |
CCAGACGAGGCAGTTGCTTA+TGG | - | chr7.4:76912995-76913014 | MS.gene74060:intron | 55.0% | |
CCATAAGCAACTGCCTCGTC+TGG | + | chr7.4:76912998-76913017 | None:intergenic | 55.0% | |
CGTCAAGCCACAAAGGATGC+CGG | - | chr7.4:76912359-76912378 | MS.gene74060:CDS | 55.0% | |
CTCAATCTCCTAAGGGCCCT+AGG | + | chr7.4:76912674-76912693 | None:intergenic | 55.0% | |
GATGAAGTTCCTCCAGCAGC+AGG | - | chr7.4:76913775-76913794 | MS.gene74060:CDS | 55.0% | |
GGACAGTAACCAGTTGGCAG+AGG | - | chr7.4:76913645-76913664 | MS.gene74060:CDS | 55.0% | |
! | CGCAGGTCCTTCACCTTTTC+CGG | + | chr7.4:76911224-76911243 | None:intergenic | 55.0% |
!! | AGGTGGAGGTGCTCCTGATA+TGG | - | chr7.4:76913738-76913757 | MS.gene74060:CDS | 55.0% |
CTCCCAGCGTCAAGCCACAA+AGG | - | chr7.4:76912352-76912371 | MS.gene74060:CDS | 60.0% | |
GAAGTTCCTCCAGCAGCAGG+TGG | - | chr7.4:76913778-76913797 | MS.gene74060:CDS | 60.0% | |
GGTGCTCCTGATATGGCTGG+TGG | - | chr7.4:76913745-76913764 | MS.gene74060:CDS | 60.0% | |
GTGGTAACCCTAGGGCCCTT+AGG | - | chr7.4:76912663-76912682 | MS.gene74060:CDS | 60.0% | |
!! | GGAGGTGCTCCTGATATGGC+TGG | - | chr7.4:76913742-76913761 | MS.gene74060:CDS | 60.0% |
ACGGGGAGCTGGAGGAATGC+CGG | + | chr7.4:76913290-76913309 | None:intergenic | 65.0% | |
TGAGGAACACCACGGGGAGC+TGG | + | chr7.4:76913301-76913320 | None:intergenic | 65.0% | |
CCAGCACCACCTGCTGCTGG+AGG | + | chr7.4:76913787-76913806 | None:intergenic | 70.0% | |
CCTCCAGCAGCAGGTGGTGC+TGG | - | chr7.4:76913784-76913803 | MS.gene74060:CDS | 70.0% | |
GGAACACCACGGGGAGCTGG+AGG | + | chr7.4:76913298-76913317 | None:intergenic | 70.0% | |
GGACCAGCACCACCTGCTGC+TGG | + | chr7.4:76913790-76913809 | None:intergenic | 70.0% | |
GGCATTCCTCCAGCTCCCCG+TGG | - | chr7.4:76913289-76913308 | MS.gene74060:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 76911217 | 76913831 | 76911217 | ID=MS.gene74060 |
chr7.4 | mRNA | 76911217 | 76913831 | 76911217 | ID=MS.gene74060.t1;Parent=MS.gene74060 |
chr7.4 | exon | 76913618 | 76913831 | 76913618 | ID=MS.gene74060.t1.exon1;Parent=MS.gene74060.t1 |
chr7.4 | CDS | 76913618 | 76913831 | 76913618 | ID=cds.MS.gene74060.t1;Parent=MS.gene74060.t1 |
chr7.4 | exon | 76911217 | 76912949 | 76911217 | ID=MS.gene74060.t1.exon2;Parent=MS.gene74060.t1 |
chr7.4 | CDS | 76911217 | 76912949 | 76911217 | ID=cds.MS.gene74060.t1;Parent=MS.gene74060.t1 |
Gene Sequence |
Protein sequence |