AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74060.t1 MTR_7g024390 99.074 648 6 0 1 648 1 648 0.0 1323
MS.gene74060.t1 MTR_7g099680 93.837 649 39 1 1 648 1 649 0.0 1259
MS.gene74060.t1 MTR_7g024580 92.791 652 40 3 1 648 1 649 0.0 1242
MS.gene74060.t1 MTR_4g063710 92.000 650 49 2 1 648 1 649 0.0 1223
MS.gene74060.t1 MTR_4g063720 91.859 651 48 2 1 648 1 649 0.0 1221
MS.gene74060.t1 MTR_4g130540 86.544 654 81 2 1 648 1 653 0.0 1149
MS.gene74060.t1 MTR_6g033850 67.480 615 199 1 1 615 1 614 0.0 853
MS.gene74060.t1 MTR_6g033760 67.045 616 202 1 1 616 1 615 0.0 842
MS.gene74060.t1 MTR_7g025760 66.023 621 207 3 1 619 1 619 0.0 839
MS.gene74060.t1 MTR_7g026030 65.862 621 207 4 1 619 1 618 0.0 833
MS.gene74060.t1 MTR_2g017730 67.107 605 179 3 9 607 8 598 0.0 827
MS.gene74060.t1 MTR_7g021440 65.528 615 208 3 1 613 1 613 0.0 824
MS.gene74060.t1 MTR_2g038260 66.559 619 200 6 1 615 1 616 0.0 824
MS.gene74060.t1 MTR_5g066800 64.490 628 208 4 1 615 1 626 0.0 823
MS.gene74060.t1 MTR_2g032550 66.069 613 204 3 6 615 7 618 0.0 819
MS.gene74060.t1 MTR_8g032650 65.862 621 207 4 1 619 1 618 0.0 816
MS.gene74060.t1 MTR_7g025820 66.667 597 195 3 1 595 1 595 0.0 812
MS.gene74060.t1 MTR_7g025720 64.734 621 214 4 1 619 1 618 0.0 810
MS.gene74060.t1 MTR_7g451380 64.563 618 215 3 1 615 1 617 0.0 808
MS.gene74060.t1 MTR_7g026110 63.695 617 218 5 1 615 1 613 0.0 805
MS.gene74060.t1 MTR_7g025790 64.563 618 214 4 1 616 1 615 0.0 802
MS.gene74060.t1 MTR_8g099945 65.147 614 208 4 7 618 36 645 0.0 799
MS.gene74060.t1 MTR_8g099795 65.309 614 207 4 7 618 36 645 0.0 799
MS.gene74060.t1 MTR_7g025620 64.918 610 209 4 1 608 1 607 0.0 799
MS.gene74060.t1 MTR_7g024030 64.812 611 210 4 1 609 1 608 0.0 799
MS.gene74060.t1 MTR_7g025630 64.251 621 203 6 1 619 1 604 0.0 791
MS.gene74060.t1 MTR_7g026090 64.553 615 212 3 1 613 1 611 0.0 791
MS.gene74060.t1 MTR_7g078190 64.000 625 216 7 1 619 1 622 0.0 789
MS.gene74060.t1 MTR_7g029415 64.332 614 211 7 6 615 13 622 0.0 786
MS.gene74060.t1 MTR_6g033870 63.099 626 224 3 2 621 3 627 0.0 786
MS.gene74060.t1 MTR_2g022050 65.210 618 211 3 1 615 1 617 0.0 786
MS.gene74060.t1 MTR_4g079590 63.502 611 218 4 1 608 1 609 0.0 785
MS.gene74060.t1 MTR_7g025740 63.328 619 213 6 1 608 1 616 0.0 783
MS.gene74060.t1 MTR_6g033955 62.460 626 229 2 1 621 1 625 0.0 781
MS.gene74060.t1 MTR_7g025770 62.783 618 225 4 1 615 1 616 0.0 781
MS.gene74060.t1 MTR_8g103930 62.124 631 206 7 1 616 1 613 0.0 779
MS.gene74060.t1 MTR_7g011590 64.019 617 205 5 1 615 1 602 0.0 778
MS.gene74060.t1 MTR_2g437440 63.107 618 206 4 1 615 1 599 0.0 777
MS.gene74060.t1 MTR_7g078210 63.782 624 218 6 1 619 1 621 0.0 776
MS.gene74060.t1 MTR_7g026170 63.328 619 220 6 1 615 1 616 0.0 776
MS.gene74060.t1 MTR_6g033820 61.356 634 239 2 1 629 1 633 0.0 776
MS.gene74060.t1 MTR_2g038270 61.146 628 228 7 1 615 1 625 0.0 764
MS.gene74060.t1 MTR_7g026130 63.124 621 217 7 1 613 1 617 0.0 751
MS.gene74060.t1 MTR_7g074460 62.783 618 208 4 1 616 1 598 0.0 751
MS.gene74060.t1 MTR_2g032580 62.359 619 196 6 1 615 1 586 0.0 745
MS.gene74060.t1 MTR_4g027145 59.905 631 234 8 1 615 1 628 0.0 737
MS.gene74060.t1 MTR_7g026140 60.420 619 220 8 1 614 1 599 0.0 731
MS.gene74060.t1 MTR_7g025260 62.478 573 211 3 49 619 21 591 0.0 724
MS.gene74060.t1 MTR_1g017130 59.083 611 205 7 1 608 1 569 0.0 713
MS.gene74060.t1 MTR_7g451360 58.937 621 190 7 1 617 1 560 0.0 702
MS.gene74060.t1 MTR_6g033800 65.209 526 180 2 90 615 1 523 0.0 697
MS.gene74060.t1 MTR_2g040260 83.000 400 66 1 1 400 1030 1427 0.0 689
MS.gene74060.t1 MTR_2g040370 87.047 386 48 1 4 389 1024 1407 0.0 689
MS.gene74060.t1 MTR_2g040370 85.195 385 54 2 4 387 1408 1790 0.0 652
MS.gene74060.t1 MTR_2g040370 87.047 386 48 1 4 389 1024 1407 0.0 689
MS.gene74060.t1 MTR_2g040370 85.233 386 54 2 4 388 1408 1791 0.0 654
MS.gene74060.t1 MTR_2g040160 82.500 400 68 1 1 400 1101 1498 0.0 677
MS.gene74060.t1 MTR_7g007000 56.704 619 217 7 1 614 1 573 0.0 674
MS.gene74060.t1 MTR_7g035155 56.149 618 212 7 1 615 1 562 0.0 663
MS.gene74060.t1 MTR_4g063720 89.315 365 33 3 287 648 217 578 0.0 652
MS.gene74060.t1 MTR_4g063720 91.964 224 18 0 1 224 1 224 1.35e-144 432
MS.gene74060.t1 MTR_2g040220 73.128 454 104 4 1 436 1010 1463 0.0 652
MS.gene74060.t1 MTR_2g040220 56.872 211 34 4 446 648 1397 1558 1.66e-55 205
MS.gene74060.t1 MTR_1g041565 55.700 614 195 10 6 615 2 542 0.0 645
MS.gene74060.t1 MTR_2g040350 79.449 399 76 3 6 400 1035 1431 0.0 645
MS.gene74060.t1 MTR_2g040350 79.449 399 76 3 6 400 817 1213 0.0 644
MS.gene74060.t1 MTR_2g032160 73.333 375 98 1 1 373 1 375 0.0 582
MS.gene74060.t1 MTR_2g032160 43.434 99 55 1 519 616 365 463 9.25e-13 71.2
MS.gene74060.t1 MTR_2g010020 52.422 578 248 10 10 580 58 615 0.0 567
MS.gene74060.t1 MTR_2g010020 52.422 578 248 10 10 580 57 614 0.0 567
MS.gene74060.t1 MTR_4g092920 51.903 578 252 9 10 578 54 614 0.0 560
MS.gene74060.t1 MTR_2g005690 47.649 638 296 12 10 637 72 681 0.0 533
MS.gene74060.t1 MTR_6g034005 49.360 547 254 8 80 615 2 536 1.05e-166 494
MS.gene74060.t1 MTR_4g092920 51.911 497 214 8 90 578 1 480 3.98e-164 481
MS.gene74060.t1 MTR_1g077230 74.823 282 69 1 1 280 1 282 1.44e-152 442
MS.gene74060.t1 MTR_4g088515 55.814 430 102 7 9 436 276 619 5.32e-146 437
MS.gene74060.t1 MTR_6g033810 59.337 332 85 3 86 415 8 291 3.04e-126 375
MS.gene74060.t1 MTR_7g026050 51.872 374 151 3 243 615 1 346 4.69e-126 377
MS.gene74060.t1 MTR_7g026080 71.138 246 69 1 1 244 1 246 1.54e-122 364
MS.gene74060.t1 MTR_6g033855 52.493 381 93 5 86 464 8 302 4.52e-120 360
MS.gene74060.t1 MTR_2g040355 47.289 461 82 10 187 646 2 302 6.02e-110 333
MS.gene74060.t1 MTR_2g031670 69.778 225 66 1 21 243 43 267 1.86e-108 331
MS.gene74060.t1 MTR_2g031670 74.627 67 16 1 342 408 275 340 2.43e-21 96.3
MS.gene74060.t1 MTR_5g006180 35.388 503 284 11 9 494 29 507 1.13e-88 287
MS.gene74060.t1 MTR_1g077240 54.545 297 125 4 320 615 1 288 4.20e-88 276
MS.gene74060.t1 MTR_2g102180 34.932 438 269 4 10 434 4 438 3.28e-84 283
MS.gene74060.t1 MTR_4g012050 34.932 438 269 4 10 434 4 438 5.31e-83 279
MS.gene74060.t1 MTR_1207s0010 71.591 176 49 1 106 281 1 175 1.07e-81 256
MS.gene74060.t1 MTR_5g097190 54.545 253 66 4 4 254 153 358 1.21e-79 257
MS.gene74060.t1 MTR_6g478100 60.849 212 69 2 36 247 10 207 7.78e-79 253
MS.gene74060.t1 MTR_6g478100 40.000 95 56 1 515 608 208 302 1.87e-12 69.3
MS.gene74060.t1 MTR_5g092570 34.660 427 270 4 10 430 4 427 1.81e-76 260
MS.gene74060.t1 MTR_3g051300 33.333 420 275 4 10 428 4 419 1.14e-75 258
MS.gene74060.t1 MTR_5g090110 33.874 493 273 13 9 482 28 486 5.96e-74 247
MS.gene74060.t1 MTR_4g115780 34.774 509 306 10 9 496 140 643 7.50e-70 240
MS.gene74060.t1 MTR_5g005870 41.718 326 178 5 265 587 35 351 3.09e-68 228
MS.gene74060.t1 MTR_4g107920 32.143 504 307 14 10 496 21 506 1.22e-67 231
MS.gene74060.t1 MTR_3g081170 27.947 526 334 13 10 498 27 544 1.09e-57 209
MS.gene74060.t1 MTR_6g033910 47.186 231 59 4 72 300 19 188 2.19e-55 187
MS.gene74060.t1 MTR_1g116250 44.364 275 110 5 342 615 56 288 1.11e-54 188
MS.gene74060.t1 MTR_7g074540 48.756 201 102 1 416 616 1 200 1.88e-54 185
MS.gene74060.t1 MTR_7g026180 75.630 119 29 0 74 192 21 139 2.84e-53 186
MS.gene74060.t1 MTR_7g026180 35.023 217 108 4 401 615 144 329 6.78e-28 115
MS.gene74060.t1 MTR_7g451390 49.180 183 91 2 436 617 10 191 4.07e-48 167
MS.gene74060.t1 MTR_2g017710 43.077 260 63 6 223 480 17 193 5.35e-48 170
MS.gene74060.t1 MTR_5g005890 38.326 227 89 4 72 297 5 181 1.32e-42 152
MS.gene74060.t1 MTR_1g068900 51.316 152 66 4 426 573 23 170 3.98e-38 139
MS.gene74060.t1 MTR_6g033805 76.056 71 17 0 1 71 1 71 7.75e-32 118
MS.gene74060.t1 MTR_4g027235 73.333 75 18 1 1 73 1 75 4.36e-30 113
MS.gene74060.t1 MTR_4g027085 73.333 75 18 1 1 73 1 75 4.36e-30 113
MS.gene74060.t1 MTR_7g026190 57.447 94 31 2 286 379 9 93 7.17e-28 112
MS.gene74060.t1 MTR_7g026190 39.496 119 69 2 498 616 94 209 1.67e-15 76.3
MS.gene74060.t1 MTR_2g040375 76.667 60 14 0 398 457 51 110 6.84e-23 94.7
MS.gene74060.t1 MTR_4g115860 46.739 92 49 0 396 487 29 120 2.23e-22 93.2
MS.gene74060.t1 MTR_6g033815 54.930 71 32 0 524 594 1 71 2.44e-20 87.0
MS.gene74060.t1 MTR_7g021430 52.000 75 36 0 213 287 1 75 1.96e-18 84.3
MS.gene74060.t1 MTR_7g026095 45.652 92 50 0 482 573 256 347 3.12e-18 87.0
MS.gene74060.t1 MTR_7g026095 50.000 88 28 2 86 173 189 260 8.46e-17 82.8
MS.gene74060.t1 MTR_7g026160 37.500 120 49 4 296 389 72 191 2.79e-12 67.4
MS.gene74060.t1 MTR_6g033995 53.226 62 21 2 1 60 1 56 8.82e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74060.t1 AT5G02500 91.551 651 52 1 1 648 1 651 0.0 1230
MS.gene74060.t1 AT3G12580 93.241 651 40 3 1 648 1 650 0.0 1229
MS.gene74060.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74060.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74060.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74060.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene74060.t1 AT5G02490 89.893 653 61 2 1 648 1 653 0.0 1203
MS.gene74060.t1 AT1G56410 87.884 619 73 1 1 619 1 617 0.0 1127
MS.gene74060.t1 AT1G16030 83.385 650 102 3 1 648 1 646 0.0 1120
MS.gene74060.t1 AT5G42020 64.904 624 212 5 7 627 35 654 0.0 829
MS.gene74060.t1 AT5G42020 64.904 624 212 5 7 627 40 659 0.0 827
MS.gene74060.t1 AT5G28540 65.472 614 206 4 7 618 35 644 0.0 824
MS.gene74060.t1 AT1G09080 63.132 613 221 3 7 618 40 648 0.0 787
MS.gene74060.t1 AT1G09080 63.132 613 221 3 7 618 50 658 0.0 786
MS.gene74060.t1 AT5G02500 93.655 394 25 0 1 394 1 394 0.0 777
MS.gene74060.t1 AT5G02500 77.206 136 28 1 516 648 386 521 4.07e-57 202
MS.gene74060.t1 AT5G42020 58.974 624 194 10 7 627 35 599 0.0 701
MS.gene74060.t1 AT5G09590 52.768 578 247 9 10 580 60 618 0.0 560
MS.gene74060.t1 AT4G24280 49.349 614 285 11 10 617 81 674 0.0 541
MS.gene74060.t1 AT5G49910 48.644 627 295 11 10 628 81 688 0.0 539
MS.gene74060.t1 AT4G37910 51.903 578 252 9 10 578 55 615 0.0 532
MS.gene74060.t1 AT4G37910 51.903 578 252 9 10 578 55 615 0.0 532
MS.gene74060.t1 AT1G79930 29.468 733 416 14 10 648 4 729 6.04e-91 300
MS.gene74060.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.98e-90 291
MS.gene74060.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.98e-90 291
MS.gene74060.t1 AT1G79930 29.059 733 419 15 10 648 4 729 8.59e-89 293
MS.gene74060.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.36e-86 286
MS.gene74060.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.91e-86 286
MS.gene74060.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.91e-86 286
MS.gene74060.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.91e-86 286
MS.gene74060.t1 AT1G11660 26.975 671 411 10 10 619 4 656 3.00e-83 278
MS.gene74060.t1 AT1G11660 26.975 671 411 10 10 619 4 656 3.00e-83 278
MS.gene74060.t1 AT1G11660 26.975 671 411 10 10 619 4 656 3.00e-83 278
MS.gene74060.t1 AT1G11660 27.044 636 385 10 45 619 2 619 3.77e-75 255
MS.gene74060.t1 AT4G16660 25.874 715 418 18 5 612 46 755 1.13e-61 221
MS.gene74060.t1 AT4G16660 25.734 715 419 18 5 612 22 731 2.87e-61 219

Find 150 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGAAAATTTGAGCTTTC+CGG 0.183269 7.4:-76911758 MS.gene74060:CDS
GGATGTCACTCCATTGTCTT+TGG 0.187672 7.4:-76911942 MS.gene74060:CDS
GGTTCAAGATTTGTTGCTTT+TGG 0.209433 7.4:-76911963 MS.gene74060:CDS
TAATCGACTTCTTCAATCTT+AGG 0.220026 7.4:+76911218 None:intergenic
AGAGAAAACTTGCTCCTTCT+TGG 0.262011 7.4:+76911859 None:intergenic
TGCAATAGTTGTTGAACTTT+GGG 0.278727 7.4:+76912094 None:intergenic
GTTCATGATGTTGTTCTTGT+TGG 0.297305 7.4:-76912133 MS.gene74060:CDS
TTACCGAAAACGGTGTTAAC+AGG 0.308664 7.4:+76913614 None:intergenic
CGTTCGGTTTCCTTGATCAT+TGG 0.309046 7.4:+76913712 None:intergenic
TGCTGAAGAAATTTCATCTA+TGG 0.318039 7.4:-76912785 MS.gene74060:CDS
GGACCAGCAGTAACCTTAAA+AGG 0.319176 7.4:+76912862 None:intergenic
TTGCAATAGTTGTTGAACTT+TGG 0.322813 7.4:+76912093 None:intergenic
TGATACATCTTAGCAATGAT+TGG 0.323430 7.4:+76911311 None:intergenic
GATGTCACTCCATTGTCTTT+GGG 0.328461 7.4:-76911941 MS.gene74060:CDS
CATACTCGTGTGTTGGAGTA+TGG 0.336614 7.4:-76913760 MS.gene74060:CDS
TCCCAACAAGTTGTTGTCTC+TGG 0.342182 7.4:+76911775 None:intergenic
CTCTCTCACCTTCATAAACT+TGG 0.342869 7.4:+76911804 None:intergenic
CCATAAGCAACTGCCTCGTC+TGG 0.352445 7.4:+76912031 None:intergenic
CATCCTTTGTGGCTTGACGC+TGG 0.360560 7.4:+76912671 None:intergenic
AAGGATGCCGGTGTTATTGC+TGG 0.363539 7.4:-76912655 MS.gene74060:CDS
GTTGGAATTGTTGTGTTCCT+TGG 0.367995 7.4:+76911881 None:intergenic
ACAGATGCTAAACGTTTGAT+TGG 0.381796 7.4:-76912931 MS.gene74060:intron
ATCCTTTGTGGCTTGACGCT+GGG 0.389762 7.4:+76912672 None:intergenic
AGAGGGTATCTTTGAAGTTA+AGG 0.389960 7.4:-76912485 MS.gene74060:CDS
CCTCCAGCAGCAGGTGGTGC+TGG 0.395029 7.4:-76911242 MS.gene74060:CDS
TGCGTATGGTCTTGACAAAA+AGG 0.402154 7.4:-76912587 MS.gene74060:CDS
TCCATACCACCAGCCATATC+AGG 0.402194 7.4:+76911275 None:intergenic
CCAGACGAGGCAGTTGCTTA+TGG 0.403652 7.4:-76912031 MS.gene74060:CDS
CTATTGCAAGATTTCTTCAA+TGG 0.409474 7.4:-76912079 MS.gene74060:CDS
GAGATTGCTGAAGCTTATCT+TGG 0.410104 7.4:-76912745 MS.gene74060:CDS
GGTTGATGCAAAGAATGCTT+TGG 0.410300 7.4:-76911519 MS.gene74060:CDS
TGAGATTGATTCTTTGTTTG+AGG 0.412145 7.4:-76912278 MS.gene74060:CDS
ACCTGCGATTGGAATAGATC+TGG 0.413445 7.4:-76913789 MS.gene74060:CDS
AGGTGGAGGTGCTCCTGATA+TGG 0.414427 7.4:-76911288 MS.gene74060:CDS
CGACAAAGGAAGGTTGTCTA+AGG 0.418046 7.4:-76911609 MS.gene74060:CDS
GGATTTGTTCAGAAAGTGTA+TGG 0.424572 7.4:-76912203 MS.gene74060:CDS
ACAATTAAAGATGAGAAGAT+TGG 0.425467 7.4:-76911470 MS.gene74060:CDS
TCCTGATATGGCTGGTGGTA+TGG 0.425793 7.4:-76911276 MS.gene74060:CDS
CTTGTAGTTAACACCAATCA+TGG 0.433031 7.4:+76912828 None:intergenic
CATGATGTTGTTCTTGTTGG+TGG 0.435475 7.4:-76912130 MS.gene74060:CDS
CAACATAAGACGGCGTCGTT+CGG 0.436894 7.4:+76913696 None:intergenic
TCTCTCAAACACTTCTCAAC+AGG 0.442304 7.4:+76912178 None:intergenic
TTTAAGGTTACTGCTGGTCC+TGG 0.442913 7.4:-76912859 MS.gene74060:CDS
GATACATCTTAGCAATGATT+GGG 0.442977 7.4:+76911312 None:intergenic
GCAAGATTTCTTCAATGGTA+AGG 0.455182 7.4:-76912074 MS.gene74060:CDS
CTCAATCTCCTAAGGGCCCT+AGG 0.455669 7.4:+76912355 None:intergenic
AATAACACCGGCATCCTTTG+TGG 0.457869 7.4:+76912660 None:intergenic
AAAACTTGCTCCTTCTTGGT+TGG 0.457926 7.4:+76911863 None:intergenic
TCTGCTGAAGACAAAACAAC+TGG 0.462288 7.4:-76911659 MS.gene74060:CDS
TAAGGAAGAAATTGAGAAGA+TGG 0.466344 7.4:-76911591 MS.gene74060:CDS
CCATCAACAATGGCCGGAAA+AGG 0.467610 7.4:-76913818 None:intergenic
AACCAGAGACAACAACTTGT+TGG 0.470053 7.4:-76911777 MS.gene74060:CDS
ACTCATCAGCCTCTGCCAAC+TGG 0.471841 7.4:+76911372 None:intergenic
GTGGTAACCCTAGGGCCCTT+AGG 0.473088 7.4:-76912363 MS.gene74060:CDS
TTCTTGTTGGTGGTTCAACT+AGG 0.473139 7.4:-76912120 MS.gene74060:CDS
CGGTGATGCTGCTAAGAATC+AGG 0.474840 7.4:-76913648 MS.gene74060:CDS
GGACCAGCACCACCTGCTGC+TGG 0.476038 7.4:+76911239 None:intergenic
ACTGCTGGTGATACTCATCT+TGG 0.479477 7.4:-76912460 MS.gene74060:CDS
TTTGAAGTTAAGGCCACTGC+TGG 0.480129 7.4:-76912475 MS.gene74060:CDS
ATGCGGTTCTCAATCTCCTA+AGG 0.480661 7.4:+76912347 None:intergenic
GAGATTGATTCTTTGTTTGA+GGG 0.481259 7.4:-76912277 MS.gene74060:CDS
GAGTGGTGAAGGCAATGAAA+AGG 0.481276 7.4:-76911984 MS.gene74060:CDS
AAGAACAAGAAGGATATTAG+TGG 0.486274 7.4:-76912382 MS.gene74060:CDS
TTGCTGGTTTGAATGTTATG+AGG 0.486524 7.4:-76912639 MS.gene74060:CDS
ACCAGAGACAACAACTTGTT+GGG 0.487350 7.4:-76911776 MS.gene74060:CDS
CCTTCCTTTGTCGTTGGTGA+TGG 0.494022 7.4:+76911619 None:intergenic
GAGATCATCGCCAATGATCA+AGG 0.498452 7.4:-76913722 MS.gene74060:CDS
GGAGGTGCTCCTGATATGGC+TGG 0.498862 7.4:-76911284 MS.gene74060:CDS
ACGGGGAGCTGGAGGAATGC+CGG 0.501984 7.4:+76911739 None:intergenic
TGAGGAACACCACGGGGAGC+TGG 0.503287 7.4:+76911728 None:intergenic
AGAAATTGAGAAGATGGTTG+AGG 0.504892 7.4:-76911585 MS.gene74060:CDS
AATCACCCGTGCTAGGTTTG+AGG 0.506158 7.4:-76912236 MS.gene74060:CDS
TCTTTGGGTCTTGAAACTGC+TGG 0.506314 7.4:-76911926 MS.gene74060:CDS
TGACGCTGCAATTCAGTGGT+TGG 0.507402 7.4:-76911402 MS.gene74060:CDS
ATCATTGCTAAGATGTATCA+AGG 0.508198 7.4:-76911308 MS.gene74060:CDS
ATGCTAAACGTTTGATTGGA+AGG 0.508528 7.4:-76912927 MS.gene74060:CDS
TCGAAACAAACTGTGATTTG+AGG 0.509328 7.4:+76911710 None:intergenic
AATCGAAATCTTACCGAAAA+CGG 0.511172 7.4:+76913604 None:intergenic
GATGAAGTTCCTCCAGCAGC+AGG 0.518012 7.4:-76911251 MS.gene74060:CDS
GTGTTTGAGAGATGCTAAGA+TGG 0.518945 7.4:-76912167 MS.gene74060:CDS
AAACAAAGAATCAATCTCAA+TGG 0.529138 7.4:+76912282 None:intergenic
CATGATTGGTGTTAACTACA+AGG 0.531338 7.4:-76912827 MS.gene74060:CDS
TTGAATCCATCAACAATGGC+CGG 0.536348 7.4:-76913824 None:intergenic
CCCAGATCTATTCCAATCGC+AGG 0.536734 7.4:+76913788 None:intergenic
AGGATATTAGTGGTAACCCT+AGG 0.539421 7.4:-76912372 MS.gene74060:CDS
TGAGTTTGAAGATAAGATGA+AGG 0.542099 7.4:-76911354 MS.gene74060:CDS
AAAGGTGAAGGACCTGCGAT+TGG 0.542152 7.4:-76913800 MS.gene74060:CDS
GCTGGTGATACTCATCTTGG+TGG 0.543324 7.4:-76912457 MS.gene74060:CDS
CGTCAAGCCACAAAGGATGC+CGG 0.544853 7.4:-76912667 MS.gene74060:CDS
ACACCACAATCACCCGTGCT+AGG 0.544924 7.4:-76912243 MS.gene74060:CDS
AGACAACCTTCCTTTGTCGT+TGG 0.545078 7.4:+76911613 None:intergenic
CCTGGTGAAAAGCCCATGAT+TGG 0.545365 7.4:-76912841 MS.gene74060:CDS
ACTGATAGTGAACGATTGAT+CGG 0.545823 7.4:-76913668 MS.gene74060:CDS
GAAATACAAGGCAGAAGATG+AGG 0.548776 7.4:-76911555 MS.gene74060:CDS
AAACCTAGCACGGGTGATTG+TGG 0.557012 7.4:+76912240 None:intergenic
TGGGAGTCGTTGAAGTAAGC+TGG 0.557282 7.4:+76912691 None:intergenic
TAGCAATGATTGGGTTGCAA+AGG 0.559904 7.4:+76911321 None:intergenic
TTATGACAGTTCTCATTCCA+AGG 0.560782 7.4:-76911898 MS.gene74060:CDS
GTCTCTTCTTACTATTGAAG+AGG 0.563002 7.4:-76912503 MS.gene74060:CDS
ACTGCTGCAGCTATTGCGTA+TGG 0.564673 7.4:-76912601 MS.gene74060:CDS
CCTGCGATTGGAATAGATCT+GGG 0.566168 7.4:-76913788 MS.gene74060:CDS
GTTTAAGAGGAAGAACAAGA+AGG 0.567567 7.4:-76912392 MS.gene74060:CDS
CATAAGCAACTGCCTCGTCT+GGG 0.573791 7.4:+76912032 None:intergenic
CACAACAATTCCAACCAAGA+AGG 0.576868 7.4:-76911873 MS.gene74060:CDS
TCAATCTCCTAAGGGCCCTA+GGG 0.578568 7.4:+76912356 None:intergenic
TGCGGTTCTCAATCTCCTAA+GGG 0.579664 7.4:+76912348 None:intergenic
GGACAGTAACCAGTTGGCAG+AGG 0.580101 7.4:-76911381 MS.gene74060:CDS
GTCTTGATCCAAGTTTATGA+AGG 0.581559 7.4:-76911812 MS.gene74060:CDS
TAAGTTCCTCAAACCTAGCA+CGG 0.587266 7.4:+76912230 None:intergenic
TCTCTTCTTACTATTGAAGA+GGG 0.590747 7.4:-76912502 MS.gene74060:CDS
GGAACAACATACTCGTGTGT+TGG 0.592871 7.4:-76913767 MS.gene74060:CDS
CCAGCACCACCTGCTGCTGG+AGG 0.596593 7.4:+76911242 None:intergenic
TAGGTTTGAGGAACTTAACA+TGG 0.598737 7.4:-76912224 MS.gene74060:CDS
CCATCACCAACGACAAAGGA+AGG 0.602128 7.4:-76911619 MS.gene74060:CDS
GCTAAGATGTATCAAGGTGG+AGG 0.602520 7.4:-76911302 MS.gene74060:CDS
GTTTCAAGACCCAAAGACAA+TGG 0.603037 7.4:+76911932 None:intergenic
TTGGGTCTTGAAACTGCTGG+TGG 0.603246 7.4:-76911923 MS.gene74060:CDS
AAAACTATGCTTACAACATG+AGG 0.603991 7.4:-76911496 MS.gene74060:CDS
TGTTTCGACATTGATGCCAA+CGG 0.605203 7.4:-76911695 MS.gene74060:CDS
ACAATGGCCGGAAAAGGTGA+AGG 0.606509 7.4:-76913812 MS.gene74060:CDS
GTGGTTGGACAGTAACCAGT+TGG 0.608307 7.4:-76911387 MS.gene74060:CDS
AAGTTCCTCAAACCTAGCAC+GGG 0.609404 7.4:+76912231 None:intergenic
TTGTAGTTAACACCAATCAT+GGG 0.609538 7.4:+76912829 None:intergenic
TGTGATTTGAGGAACACCAC+GGG 0.611264 7.4:+76911721 None:intergenic
TACCGAAAACGGTGTTAACA+GGG 0.612530 7.4:+76913615 None:intergenic
ATTACCATCACCAACGACAA+AGG 0.613058 7.4:-76911623 MS.gene74060:CDS
CTCCCAGCGTCAAGCCACAA+AGG 0.614910 7.4:-76912674 MS.gene74060:CDS
TCTCTTCGCTCTCTCACATG+CGG 0.617111 7.4:+76912330 None:intergenic
TCAGTAAAAGCAACATAAGA+CGG 0.621546 7.4:+76913686 None:intergenic
TTCAGAGTGACATGAAGTTG+TGG 0.623777 7.4:-76912885 MS.gene74060:CDS
GGATATTAGTGGTAACCCTA+GGG 0.625986 7.4:-76912371 MS.gene74060:CDS
TGGATCAAAGCTTTCACCAG+AGG 0.630537 7.4:-76911450 MS.gene74060:CDS
GGAACACCACGGGGAGCTGG+AGG 0.631612 7.4:+76911731 None:intergenic
TGGTGTTAACTACAAGGGTG+AGG 0.634934 7.4:-76912821 MS.gene74060:CDS
AGAGACATTCAAGATACCGT+TGG 0.636371 7.4:+76911679 None:intergenic
TGAGGAAGCAGAGAAATACA+AGG 0.640542 7.4:-76911567 MS.gene74060:CDS
GGTGCTCCTGATATGGCTGG+TGG 0.645251 7.4:-76911281 MS.gene74060:CDS
CAAGAGTATCAACCCAGACG+AGG 0.648278 7.4:-76912044 MS.gene74060:CDS
GAAGTTCCTCCAGCAGCAGG+TGG 0.652201 7.4:-76911248 MS.gene74060:CDS
CAATTGACGCTGCAATTCAG+TGG 0.657113 7.4:-76911406 MS.gene74060:CDS
AAGATGAGTATCACCAGCAG+TGG 0.661313 7.4:+76912462 None:intergenic
ATGATTGGTGTTAACTACAA+GGG 0.664773 7.4:-76912826 MS.gene74060:CDS
CTGTGATTTGAGGAACACCA+CGG 0.668774 7.4:+76911720 None:intergenic
TACGCAATAGCTGCAGCAGT+AGG 0.677506 7.4:+76912604 None:intergenic
TAAACTTGGATCAAGACACC+AGG 0.678843 7.4:+76911818 None:intergenic
ATTCAAACCAGCAATAACAC+CGG 0.680140 7.4:+76912648 None:intergenic
GGCATTCCTCCAGCTCCCCG+TGG 0.680342 7.4:-76911737 MS.gene74060:CDS
ACTTACTCAGACAATCAACC+TGG 0.684536 7.4:-76911836 MS.gene74060:CDS
ATTGCTAAGATGTATCAAGG+TGG 0.733799 7.4:-76911305 MS.gene74060:CDS
GTGATTTGAGGAACACCACG+GGG 0.760451 7.4:+76911722 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATAAATAATTAATCTA+GGG - chr7.4:76911564-76911583 MS.gene74060:CDS 10.0%
!! TGAAAATAAATAATTAATCT+AGG - chr7.4:76911563-76911582 MS.gene74060:CDS 10.0%
!! TTTATAATGATAGAACATTA+TGG - chr7.4:76911864-76911883 MS.gene74060:CDS 15.0%
!! GATACTATTTAATTAAGACA+CGG + chr7.4:76911936-76911955 None:intergenic 20.0%
!!! AATGTGTTGATTTTTGATTT+GGG - chr7.4:76912482-76912501 MS.gene74060:CDS 20.0%
!!! ATTTGTTTGTTTTTTTGAGT+TGG - chr7.4:76911829-76911848 MS.gene74060:CDS 20.0%
! AAACAAAGAATCAATCTCAA+TGG + chr7.4:76912747-76912766 None:intergenic 25.0%
! ACAATTAAAGATGAGAAGAT+TGG - chr7.4:76913556-76913575 MS.gene74060:intron 25.0%
! AGAATAATTAGATCACTTAC+AGG - chr7.4:76911779-76911798 MS.gene74060:CDS 25.0%
!! AATGGTTAATCATTTTGTTC+AGG - chr7.4:76912610-76912629 MS.gene74060:CDS 25.0%
!! TTTATTCTTGTTGATTACTG+AGG - chr7.4:76911753-76911772 MS.gene74060:CDS 25.0%
!!! AATTAATCTAGGGTTTTATC+TGG - chr7.4:76911574-76911593 MS.gene74060:CDS 25.0%
!!! GAATGTGTTGATTTTTGATT+TGG - chr7.4:76912481-76912500 MS.gene74060:CDS 25.0%
!!! TGAAGATTTTGATAACAGAA+TGG - chr7.4:76912592-76912611 MS.gene74060:CDS 25.0%
!!! TTTGTTTTTTTGAGTTGGAT+TGG - chr7.4:76911834-76911853 MS.gene74060:CDS 25.0%
AAAACTATGCTTACAACATG+AGG - chr7.4:76913530-76913549 MS.gene74060:intron 30.0%
AAGAACAAGAAGGATATTAG+TGG - chr7.4:76912644-76912663 MS.gene74060:CDS 30.0%
AATCGAAATCTTACCGAAAA+CGG + chr7.4:76911425-76911444 None:intergenic 30.0%
ATCATTGCTAAGATGTATCA+AGG - chr7.4:76913718-76913737 MS.gene74060:CDS 30.0%
ATGGTGTAATTTGATCATGT+AGG - chr7.4:76911883-76911902 MS.gene74060:CDS 30.0%
CTATTGCAAGATTTCTTCAA+TGG - chr7.4:76912947-76912966 MS.gene74060:intron 30.0%
GATACATCTTAGCAATGATT+GGG + chr7.4:76913717-76913736 None:intergenic 30.0%
GTAATTTGATCATGTAGGTT+TGG - chr7.4:76911888-76911907 MS.gene74060:CDS 30.0%
TAAGGAAGAAATTGAGAAGA+TGG - chr7.4:76913435-76913454 MS.gene74060:intron 30.0%
TCAGTAAAAGCAACATAAGA+CGG + chr7.4:76911343-76911362 None:intergenic 30.0%
TCTCTTCTTACTATTGAAGA+GGG - chr7.4:76912524-76912543 MS.gene74060:CDS 30.0%
TGAGTTTGAAGATAAGATGA+AGG - chr7.4:76913672-76913691 MS.gene74060:CDS 30.0%
TGATACATCTTAGCAATGAT+TGG + chr7.4:76913718-76913737 None:intergenic 30.0%
TGCAATAGTTGTTGAACTTT+GGG + chr7.4:76912935-76912954 None:intergenic 30.0%
TGCTGAAGAAATTTCATCTA+TGG - chr7.4:76912241-76912260 MS.gene74060:CDS 30.0%
TTGCAATAGTTGTTGAACTT+TGG + chr7.4:76912936-76912955 None:intergenic 30.0%
TTGTAGTTAACACCAATCAT+GGG + chr7.4:76912200-76912219 None:intergenic 30.0%
! ATTTTGTTCAGGAGTTTAAG+AGG - chr7.4:76912621-76912640 MS.gene74060:CDS 30.0%
! GAGATTGATTCTTTGTTTGA+GGG - chr7.4:76912749-76912768 MS.gene74060:CDS 30.0%
! TAATCGACTTCTTCAATCTT+AGG + chr7.4:76913811-76913830 None:intergenic 30.0%
! TGAGATTGATTCTTTGTTTG+AGG - chr7.4:76912748-76912767 MS.gene74060:CDS 30.0%
! TTAGAAGTTTGTTTGCTCAT+TGG - chr7.4:76912050-76912069 MS.gene74060:CDS 30.0%
! TTGTTTGCTCATTGGTTATT+TGG - chr7.4:76912058-76912077 MS.gene74060:CDS 30.0%
!! ATGATTGGTGTTAACTACAA+GGG - chr7.4:76912200-76912219 MS.gene74060:CDS 30.0%
!!! TTTTGAGTTGGATTGGAATA+TGG - chr7.4:76911841-76911860 MS.gene74060:CDS 30.0%
ACAGATGCTAAACGTTTGAT+TGG - chr7.4:76912095-76912114 MS.gene74060:CDS 35.0%
AGAAATTGAGAAGATGGTTG+AGG - chr7.4:76913441-76913460 MS.gene74060:intron 35.0%
AGATGAGGAACACAAAAAGA+AGG - chr7.4:76913486-76913505 MS.gene74060:intron 35.0%
ATGCTAAACGTTTGATTGGA+AGG - chr7.4:76912099-76912118 MS.gene74060:CDS 35.0%
ATTCAAACCAGCAATAACAC+CGG + chr7.4:76912381-76912400 None:intergenic 35.0%
ATTGCTAAGATGTATCAAGG+TGG - chr7.4:76913721-76913740 MS.gene74060:CDS 35.0%
CTTGTAGTTAACACCAATCA+TGG + chr7.4:76912201-76912220 None:intergenic 35.0%
GCAAGATTTCTTCAATGGTA+AGG - chr7.4:76912952-76912971 MS.gene74060:intron 35.0%
GTCTCTTCTTACTATTGAAG+AGG - chr7.4:76912523-76912542 MS.gene74060:CDS 35.0%
GTCTTGATCCAAGTTTATGA+AGG - chr7.4:76913214-76913233 MS.gene74060:intron 35.0%
GTTCATGATGTTGTTCTTGT+TGG - chr7.4:76912893-76912912 MS.gene74060:CDS 35.0%
GTTTAAGAGGAAGAACAAGA+AGG - chr7.4:76912634-76912653 MS.gene74060:CDS 35.0%
TAGGTTTGAGGAACTTAACA+TGG - chr7.4:76912802-76912821 MS.gene74060:CDS 35.0%
TCGAAACAAACTGTGATTTG+AGG + chr7.4:76913319-76913338 None:intergenic 35.0%
TTATGACAGTTCTCATTCCA+AGG - chr7.4:76913128-76913147 MS.gene74060:intron 35.0%
TTGGGAAAATTTGAGCTTTC+CGG - chr7.4:76913268-76913287 MS.gene74060:intron 35.0%
! ACTGATAGTGAACGATTGAT+CGG - chr7.4:76911358-76911377 MS.gene74060:CDS 35.0%
! GGATTTGTTCAGAAAGTGTA+TGG - chr7.4:76912823-76912842 MS.gene74060:CDS 35.0%
! TCAATCTTCTTTTTGTCCTC+TGG + chr7.4:76913595-76913614 None:intergenic 35.0%
!! AGAGGGTATCTTTGAAGTTA+AGG - chr7.4:76912541-76912560 MS.gene74060:CDS 35.0%
!! CATGATTGGTGTTAACTACA+AGG - chr7.4:76912199-76912218 MS.gene74060:CDS 35.0%
!! TTGCTGGTTTGAATGTTATG+AGG - chr7.4:76912387-76912406 MS.gene74060:CDS 35.0%
!!! GGTTCAAGATTTGTTGCTTT+TGG - chr7.4:76913063-76913082 MS.gene74060:intron 35.0%
!!! GTGTTGATTTTTGATTTGGG+AGG - chr7.4:76912485-76912504 MS.gene74060:CDS 35.0%
!!! TTGATTTTTGATTTGGGAGG+TGG - chr7.4:76912488-76912507 MS.gene74060:CDS 35.0%
AACCAGAGACAACAACTTGT+TGG - chr7.4:76913249-76913268 MS.gene74060:intron 40.0%
ACTTACTCAGACAATCAACC+TGG - chr7.4:76913190-76913209 MS.gene74060:intron 40.0%
AGAGACATTCAAGATACCGT+TGG + chr7.4:76913350-76913369 None:intergenic 40.0%
AGGATATTAGTGGTAACCCT+AGG - chr7.4:76912654-76912673 MS.gene74060:CDS 40.0%
ATTACCATCACCAACGACAA+AGG - chr7.4:76913403-76913422 MS.gene74060:intron 40.0%
CACAACAATTCCAACCAAGA+AGG - chr7.4:76913153-76913172 MS.gene74060:intron 40.0%
CATGATGTTGTTCTTGTTGG+TGG - chr7.4:76912896-76912915 MS.gene74060:CDS 40.0%
CTCTCTCACCTTCATAAACT+TGG + chr7.4:76913225-76913244 None:intergenic 40.0%
GAAATACAAGGCAGAAGATG+AGG - chr7.4:76913471-76913490 MS.gene74060:intron 40.0%
GAGATTGCTGAAGCTTATCT+TGG - chr7.4:76912281-76912300 MS.gene74060:CDS 40.0%
GATGTCACTCCATTGTCTTT+GGG - chr7.4:76913085-76913104 MS.gene74060:intron 40.0%
GGATATTAGTGGTAACCCTA+GGG - chr7.4:76912655-76912674 MS.gene74060:CDS 40.0%
GTGTTTGAGAGATGCTAAGA+TGG - chr7.4:76912859-76912878 MS.gene74060:CDS 40.0%
GTTGGAATTGTTGTGTTCCT+TGG + chr7.4:76913148-76913167 None:intergenic 40.0%
GTTTCAAGACCCAAAGACAA+TGG + chr7.4:76913097-76913116 None:intergenic 40.0%
TAAACTTGGATCAAGACACC+AGG + chr7.4:76913211-76913230 None:intergenic 40.0%
TAAGTTCCTCAAACCTAGCA+CGG + chr7.4:76912799-76912818 None:intergenic 40.0%
TCTCTCAAACACTTCTCAAC+AGG + chr7.4:76912851-76912870 None:intergenic 40.0%
TCTGCTGAAGACAAAACAAC+TGG - chr7.4:76913367-76913386 MS.gene74060:intron 40.0%
TGAGGAAGCAGAGAAATACA+AGG - chr7.4:76913459-76913478 MS.gene74060:intron 40.0%
TGTTTCGACATTGATGCCAA+CGG - chr7.4:76913331-76913350 MS.gene74060:intron 40.0%
TTCAGAGTGACATGAAGTTG+TGG - chr7.4:76912141-76912160 MS.gene74060:CDS 40.0%
! AAAACTTGCTCCTTCTTGGT+TGG + chr7.4:76913166-76913185 None:intergenic 40.0%
! AACCCTGTTAACACCGTTTT+CGG - chr7.4:76911409-76911428 MS.gene74060:CDS 40.0%
! ACCAGAGACAACAACTTGTT+GGG - chr7.4:76913250-76913269 MS.gene74060:intron 40.0%
! AGAGAAAACTTGCTCCTTCT+TGG + chr7.4:76913170-76913189 None:intergenic 40.0%
! CATGAAGTTGTGGCCTTTTA+AGG - chr7.4:76912151-76912170 MS.gene74060:CDS 40.0%
! GGTTGATGCAAAGAATGCTT+TGG - chr7.4:76913507-76913526 MS.gene74060:intron 40.0%
! TACCGAAAACGGTGTTAACA+GGG + chr7.4:76911414-76911433 None:intergenic 40.0%
! TAGCAATGATTGGGTTGCAA+AGG + chr7.4:76913708-76913727 None:intergenic 40.0%
! TGCGTATGGTCTTGACAAAA+AGG - chr7.4:76912439-76912458 MS.gene74060:CDS 40.0%
! TTACCGAAAACGGTGTTAAC+AGG + chr7.4:76911415-76911434 None:intergenic 40.0%
!! GTACAAGCAGCTATTTTGAG+TGG - chr7.4:76913025-76913044 MS.gene74060:intron 40.0%
!! TTCTTGTTGGTGGTTCAACT+AGG - chr7.4:76912906-76912925 MS.gene74060:CDS 40.0%
AAGATGAGTATCACCAGCAG+TGG + chr7.4:76912567-76912586 None:intergenic 45.0%
AAGTTCCTCAAACCTAGCAC+GGG + chr7.4:76912798-76912817 None:intergenic 45.0%
AATAACACCGGCATCCTTTG+TGG + chr7.4:76912369-76912388 None:intergenic 45.0%
ACCTGCGATTGGAATAGATC+TGG - chr7.4:76911237-76911256 MS.gene74060:CDS 45.0%
ACTGCTGGTGATACTCATCT+TGG - chr7.4:76912566-76912585 MS.gene74060:CDS 45.0%
AGACAACCTTCCTTTGTCGT+TGG + chr7.4:76913416-76913435 None:intergenic 45.0%
ATGCGGTTCTCAATCTCCTA+AGG + chr7.4:76912682-76912701 None:intergenic 45.0%
CAATTGACGCTGCAATTCAG+TGG - chr7.4:76913620-76913639 MS.gene74060:CDS 45.0%
CATACTCGTGTGTTGGAGTA+TGG - chr7.4:76911266-76911285 MS.gene74060:CDS 45.0%
CCTGCGATTGGAATAGATCT+GGG - chr7.4:76911238-76911257 MS.gene74060:CDS 45.0%
CGACAAAGGAAGGTTGTCTA+AGG - chr7.4:76913417-76913436 MS.gene74060:intron 45.0%
CGTTCGGTTTCCTTGATCAT+TGG + chr7.4:76911317-76911336 None:intergenic 45.0%
CTGTGATTTGAGGAACACCA+CGG + chr7.4:76913309-76913328 None:intergenic 45.0%
GAGATCATCGCCAATGATCA+AGG - chr7.4:76911304-76911323 MS.gene74060:CDS 45.0%
GAGTGGTGAAGGCAATGAAA+AGG - chr7.4:76913042-76913061 MS.gene74060:intron 45.0%
GCTAAGATGTATCAAGGTGG+AGG - chr7.4:76913724-76913743 MS.gene74060:CDS 45.0%
GGAACAACATACTCGTGTGT+TGG - chr7.4:76911259-76911278 MS.gene74060:CDS 45.0%
GGACCAGCAGTAACCTTAAA+AGG + chr7.4:76912167-76912186 None:intergenic 45.0%
GGATGTCACTCCATTGTCTT+TGG - chr7.4:76913084-76913103 MS.gene74060:intron 45.0%
TCCCAACAAGTTGTTGTCTC+TGG + chr7.4:76913254-76913273 None:intergenic 45.0%
TCTTTGGGTCTTGAAACTGC+TGG - chr7.4:76913100-76913119 MS.gene74060:intron 45.0%
TGCGGTTCTCAATCTCCTAA+GGG + chr7.4:76912681-76912700 None:intergenic 45.0%
TGGATCAAAGCTTTCACCAG+AGG - chr7.4:76913576-76913595 MS.gene74060:intron 45.0%
TGTGATTTGAGGAACACCAC+GGG + chr7.4:76913308-76913327 None:intergenic 45.0%
! TGGTGTTAACTACAAGGGTG+AGG - chr7.4:76912205-76912224 MS.gene74060:CDS 45.0%
! TTTAAGGTTACTGCTGGTCC+TGG - chr7.4:76912167-76912186 MS.gene74060:CDS 45.0%
! TTTGAAGTTAAGGCCACTGC+TGG - chr7.4:76912551-76912570 MS.gene74060:CDS 45.0%
!! GCAGCTATTTTGAGTGGTGA+AGG - chr7.4:76913031-76913050 MS.gene74060:intron 45.0%
!!! TGGCCTTTTAAGGTTACTGC+TGG - chr7.4:76912161-76912180 MS.gene74060:CDS 45.0%
!!! TTTTTATATTGAAATTTAAT+TGG - chr7.4:76912022-76912041 MS.gene74060:CDS 5.0%
AAACCTAGCACGGGTGATTG+TGG + chr7.4:76912789-76912808 None:intergenic 50.0%
AAAGGTGAAGGACCTGCGAT+TGG - chr7.4:76911226-76911245 MS.gene74060:CDS 50.0%
AATCACCCGTGCTAGGTTTG+AGG - chr7.4:76912790-76912809 MS.gene74060:CDS 50.0%
ACTGCTGCAGCTATTGCGTA+TGG - chr7.4:76912425-76912444 MS.gene74060:CDS 50.0%
ATCCTTTGTGGCTTGACGCT+GGG + chr7.4:76912357-76912376 None:intergenic 50.0%
CAACATAAGACGGCGTCGTT+CGG + chr7.4:76911333-76911352 None:intergenic 50.0%
CATAAGCAACTGCCTCGTCT+GGG + chr7.4:76912997-76913016 None:intergenic 50.0%
CCATCACCAACGACAAAGGA+AGG - chr7.4:76913407-76913426 MS.gene74060:intron 50.0%
CCCAGATCTATTCCAATCGC+AGG + chr7.4:76911241-76911260 None:intergenic 50.0%
CCTGGTGAAAAGCCCATGAT+TGG - chr7.4:76912185-76912204 MS.gene74060:CDS 50.0%
CGGTGATGCTGCTAAGAATC+AGG - chr7.4:76911378-76911397 MS.gene74060:CDS 50.0%
GACAAAAAGGCGACGAGTGT+TGG - chr7.4:76912452-76912471 MS.gene74060:CDS 50.0%
GCTGGTGATACTCATCTTGG+TGG - chr7.4:76912569-76912588 MS.gene74060:CDS 50.0%
GTGATTTGAGGAACACCACG+GGG + chr7.4:76913307-76913326 None:intergenic 50.0%
GTGGTTGGACAGTAACCAGT+TGG - chr7.4:76913639-76913658 MS.gene74060:CDS 50.0%
TACGCAATAGCTGCAGCAGT+AGG + chr7.4:76912425-76912444 None:intergenic 50.0%
TCAATCTCCTAAGGGCCCTA+GGG + chr7.4:76912673-76912692 None:intergenic 50.0%
TCCATACCACCAGCCATATC+AGG + chr7.4:76913754-76913773 None:intergenic 50.0%
TCCTGATATGGCTGGTGGTA+TGG - chr7.4:76913750-76913769 MS.gene74060:CDS 50.0%
TCTCTTCGCTCTCTCACATG+CGG + chr7.4:76912699-76912718 None:intergenic 50.0%
TGACGCTGCAATTCAGTGGT+TGG - chr7.4:76913624-76913643 MS.gene74060:CDS 50.0%
TGGGAGTCGTTGAAGTAAGC+TGG + chr7.4:76912338-76912357 None:intergenic 50.0%
TTGGGTCTTGAAACTGCTGG+TGG - chr7.4:76913103-76913122 MS.gene74060:intron 50.0%
! CCAATCATGGGCTTTTCACC+AGG + chr7.4:76912188-76912207 None:intergenic 50.0%
! CCTTCCTTTGTCGTTGGTGA+TGG + chr7.4:76913410-76913429 None:intergenic 50.0%
!! AAGGATGCCGGTGTTATTGC+TGG - chr7.4:76912371-76912390 MS.gene74060:CDS 50.0%
!! CAAGAGTATCAACCCAGACG+AGG - chr7.4:76912982-76913001 MS.gene74060:intron 50.0%
ACACCACAATCACCCGTGCT+AGG - chr7.4:76912783-76912802 MS.gene74060:CDS 55.0%
ACTCATCAGCCTCTGCCAAC+TGG + chr7.4:76913657-76913676 None:intergenic 55.0%
CATCCTTTGTGGCTTGACGC+TGG + chr7.4:76912358-76912377 None:intergenic 55.0%
CCAGACGAGGCAGTTGCTTA+TGG - chr7.4:76912995-76913014 MS.gene74060:intron 55.0%
CCATAAGCAACTGCCTCGTC+TGG + chr7.4:76912998-76913017 None:intergenic 55.0%
CGTCAAGCCACAAAGGATGC+CGG - chr7.4:76912359-76912378 MS.gene74060:CDS 55.0%
CTCAATCTCCTAAGGGCCCT+AGG + chr7.4:76912674-76912693 None:intergenic 55.0%
GATGAAGTTCCTCCAGCAGC+AGG - chr7.4:76913775-76913794 MS.gene74060:CDS 55.0%
GGACAGTAACCAGTTGGCAG+AGG - chr7.4:76913645-76913664 MS.gene74060:CDS 55.0%
! CGCAGGTCCTTCACCTTTTC+CGG + chr7.4:76911224-76911243 None:intergenic 55.0%
!! AGGTGGAGGTGCTCCTGATA+TGG - chr7.4:76913738-76913757 MS.gene74060:CDS 55.0%
CTCCCAGCGTCAAGCCACAA+AGG - chr7.4:76912352-76912371 MS.gene74060:CDS 60.0%
GAAGTTCCTCCAGCAGCAGG+TGG - chr7.4:76913778-76913797 MS.gene74060:CDS 60.0%
GGTGCTCCTGATATGGCTGG+TGG - chr7.4:76913745-76913764 MS.gene74060:CDS 60.0%
GTGGTAACCCTAGGGCCCTT+AGG - chr7.4:76912663-76912682 MS.gene74060:CDS 60.0%
!! GGAGGTGCTCCTGATATGGC+TGG - chr7.4:76913742-76913761 MS.gene74060:CDS 60.0%
ACGGGGAGCTGGAGGAATGC+CGG + chr7.4:76913290-76913309 None:intergenic 65.0%
TGAGGAACACCACGGGGAGC+TGG + chr7.4:76913301-76913320 None:intergenic 65.0%
CCAGCACCACCTGCTGCTGG+AGG + chr7.4:76913787-76913806 None:intergenic 70.0%
CCTCCAGCAGCAGGTGGTGC+TGG - chr7.4:76913784-76913803 MS.gene74060:CDS 70.0%
GGAACACCACGGGGAGCTGG+AGG + chr7.4:76913298-76913317 None:intergenic 70.0%
GGACCAGCACCACCTGCTGC+TGG + chr7.4:76913790-76913809 None:intergenic 70.0%
GGCATTCCTCCAGCTCCCCG+TGG - chr7.4:76913289-76913308 MS.gene74060:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 76911217 76913831 76911217 ID=MS.gene74060
chr7.4 mRNA 76911217 76913831 76911217 ID=MS.gene74060.t1;Parent=MS.gene74060
chr7.4 exon 76913618 76913831 76913618 ID=MS.gene74060.t1.exon1;Parent=MS.gene74060.t1
chr7.4 CDS 76913618 76913831 76913618 ID=cds.MS.gene74060.t1;Parent=MS.gene74060.t1
chr7.4 exon 76911217 76912949 76911217 ID=MS.gene74060.t1.exon2;Parent=MS.gene74060.t1
chr7.4 CDS 76911217 76912949 76911217 ID=cds.MS.gene74060.t1;Parent=MS.gene74060.t1
Gene Sequence

>MS.gene74060

ATGGCCGGAAAAGGTGAAGGACCTGCGATTGGAATAGATCTGGGAACAACATACTCGTGTGTTGGAGTATGGCAACACGATCGTGTCGAGATCATCGCCAATGATCAAGGAAACCGAACGACGCCGTCTTATGTTGCTTTTACTGATAGTGAACGATTGATCGGTGATGCTGCTAAGAATCAGGTTGCGATGAACCCTGTTAACACCGTTTTCGGTAAGATTTCGATTCTCAACATTCACATTATTAAAGTTTTGATTTTGTTATGCAGATTGTGATTTCATTGTTATATGTACAGCATTGTCGTTATTACGTTATATATGTACATTGTAATTTTTTTTTTATTGTTGAAAATAAATAATTAATCTAGGGTTTTATCTGGTTAATTTTCAGTTATTTGTTTGTTGTGATTTTAAGCTTGTGAGTTCTTTAATGTATATGATGTTTGTTAAATTAAATAATTAATTATGAACATTATAACTTTTGTTGATAGAATATGAACATTTATATCAATATATGCTGTTATATTATATTTACTTTTATTCTTGTTGATTACTGAGGTTTAGAATAATTAGATCACTTACAGGTGAATTCGTAGTCATTTACTGAATGTAATTTGTTTGTTTTTTTGAGTTGGATTGGAATATGGTTTATAATGATAGAACATTATGGTGTAATTTGATCATGTAGGTTTGGTTGTTGTTGACGATGAATGAGTCCGTGTCTTAATTAAATAGTATCATGCAAAAGATTGATTTAATATGATAATATGATGATATTTGATAAGCTTGATTGTTATTTATTTATTTTTTATATTGAAATTTAATTGGTTTATTTAGAAGTTTGTTTGCTCATTGGTTATTTGGATGTGTATGATAAAACAGATGCTAAACGTTTGATTGGAAGGAGAGTTTCTGATGCATCTGTTCAGAGTGACATGAAGTTGTGGCCTTTTAAGGTTACTGCTGGTCCTGGTGAAAAGCCCATGATTGGTGTTAACTACAAGGGTGAGGACAAGCAATTTGCTGCTGAAGAAATTTCATCTATGGTGCTCATGAAGATGCGTGAGATTGCTGAAGCTTATCTTGGTTCAGCTGTGAAGAATGCTGTTGTTACAGTTCCAGCTTACTTCAACGACTCCCAGCGTCAAGCCACAAAGGATGCCGGTGTTATTGCTGGTTTGAATGTTATGAGGATTATCAATGAGCCTACTGCTGCAGCTATTGCGTATGGTCTTGACAAAAAGGCGACGAGTGTTGGCGAGAAGAATGTGTTGATTTTTGATTTGGGAGGTGGTACTTTTGATGTGTCTCTTCTTACTATTGAAGAGGGTATCTTTGAAGTTAAGGCCACTGCTGGTGATACTCATCTTGGTGGTGAAGATTTTGATAACAGAATGGTTAATCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGGATATTAGTGGTAACCCTAGGGCCCTTAGGAGATTGAGAACCGCATGTGAGAGAGCGAAGAGAACTCTCTCATCAACTGCACAAACTACCATTGAGATTGATTCTTTGTTTGAGGGTGTTGATTTTTACACCACAATCACCCGTGCTAGGTTTGAGGAACTTAACATGGATTTGTTCAGAAAGTGTATGGAGCCTGTTGAGAAGTGTTTGAGAGATGCTAAGATGGACAAGAACTCTGTTCATGATGTTGTTCTTGTTGGTGGTTCAACTAGGATTCCCAAAGTTCAACAACTATTGCAAGATTTCTTCAATGGTAAGGAGCTTTGCAAGAGTATCAACCCAGACGAGGCAGTTGCTTATGGTGCTGCTGTACAAGCAGCTATTTTGAGTGGTGAAGGCAATGAAAAGGTTCAAGATTTGTTGCTTTTGGATGTCACTCCATTGTCTTTGGGTCTTGAAACTGCTGGTGGTGTTATGACAGTTCTCATTCCAAGGAACACAACAATTCCAACCAAGAAGGAGCAAGTTTTCTCTACTTACTCAGACAATCAACCTGGTGTCTTGATCCAAGTTTATGAAGGTGAGAGAGCAAGAACCAGAGACAACAACTTGTTGGGAAAATTTGAGCTTTCCGGCATTCCTCCAGCTCCCCGTGGTGTTCCTCAAATCACAGTTTGTTTCGACATTGATGCCAACGGTATCTTGAATGTCTCTGCTGAAGACAAAACAACTGGACAGAAGAACAAGATTACCATCACCAACGACAAAGGAAGGTTGTCTAAGGAAGAAATTGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCAGAAGATGAGGAACACAAAAAGAAGGTTGATGCAAAGAATGCTTTGGAAAACTATGCTTACAACATGAGGAACACAATTAAAGATGAGAAGATTGGATCAAAGCTTTCACCAGAGGACAAAAAGAAGATTGATGATGCAATTGACGCTGCAATTCAGTGGTTGGACAGTAACCAGTTGGCAGAGGCTGATGAGTTTGAAGATAAGATGAAGGAACTTGAGAGCCTTTGCAACCCAATCATTGCTAAGATGTATCAAGGTGGAGGTGCTCCTGATATGGCTGGTGGTATGGATGATGAAGTTCCTCCAGCAGCAGGTGGTGCTGGTCCTAAGATTGAAGAAGTCGATTAA

Protein sequence

>MS.gene74060.t1

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRVSDASVQSDMKLWPFKVTAGPGEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGSKLSPEDKKKIDDAIDAAIQWLDSNQLAEADEFEDKMKELESLCNPIIAKMYQGGGAPDMAGGMDDEVPPAAGGAGPKIEEVD