Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75125.t1 | XP_013453257.1 | 94.7 | 815 | 41 | 2 | 1 | 815 | 1 | 813 | 0.00E+00 | 1495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75125.t1 | F4IK92 | 41.3 | 825 | 449 | 17 | 1 | 812 | 14 | 816 | 1.8e-148 | 528.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75125.t1 | A0A072UCW5 | 94.7 | 815 | 41 | 2 | 1 | 815 | 1 | 813 | 0.0e+00 | 1495.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04985 | MS.gene75125 | 0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene75125 | 0.861012 | 1.38E-63 | -1.69E-46 |
| MS.gene050297 | MS.gene75125 | 0.863446 | 2.47E-64 | -1.69E-46 |
| MS.gene050648 | MS.gene75125 | 0.841845 | 3.71E-58 | -1.69E-46 |
| MS.gene051094 | MS.gene75125 | 0.810425 | 1.16E-50 | -1.69E-46 |
| MS.gene051263 | MS.gene75125 | 0.830867 | 2.31E-55 | -1.69E-46 |
| MS.gene051629 | MS.gene75125 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene052367 | MS.gene75125 | 0.817384 | 3.39E-52 | -1.69E-46 |
| MS.gene053416 | MS.gene75125 | 0.825567 | 4.37E-54 | -1.69E-46 |
| MS.gene053417 | MS.gene75125 | 0.825833 | 3.78E-54 | -1.69E-46 |
| MS.gene053929 | MS.gene75125 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene054643 | MS.gene75125 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene75125 | 0.820353 | 7.17E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene75125 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene056228 | MS.gene75125 | 0.813243 | 2.82E-51 | -1.69E-46 |
| MS.gene056526 | MS.gene75125 | 0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene058197 | MS.gene75125 | 0.817692 | 2.89E-52 | -1.69E-46 |
| MS.gene058198 | MS.gene75125 | 0.816016 | 6.87E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene75125 | 0.846078 | 2.72E-59 | -1.69E-46 |
| MS.gene060473 | MS.gene75125 | 0.817173 | 3.78E-52 | -1.69E-46 |
| MS.gene060565 | MS.gene75125 | 0.819463 | 1.15E-52 | -1.69E-46 |
| MS.gene06057 | MS.gene75125 | 0.842175 | 3.04E-58 | -1.69E-46 |
| MS.gene061260 | MS.gene75125 | 0.804842 | 1.78E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75125.t1 | MTR_6g093150 | 94.724 | 815 | 41 | 2 | 1 | 815 | 1 | 813 | 0.0 | 1592 |
| MS.gene75125.t1 | MTR_6g093150 | 94.089 | 609 | 34 | 2 | 207 | 815 | 50 | 656 | 0.0 | 1179 |
| MS.gene75125.t1 | MTR_3g050060 | 25.685 | 876 | 529 | 19 | 12 | 787 | 27 | 880 | 1.55e-68 | 244 |
| MS.gene75125.t1 | MTR_3g050060 | 25.143 | 875 | 546 | 19 | 12 | 787 | 27 | 891 | 9.46e-68 | 242 |
| MS.gene75125.t1 | MTR_4g107110 | 36.268 | 284 | 176 | 1 | 7 | 290 | 1 | 279 | 4.62e-51 | 186 |
| MS.gene75125.t1 | MTR_4g107110 | 36.268 | 284 | 176 | 1 | 7 | 290 | 1 | 279 | 5.06e-50 | 186 |
| MS.gene75125.t1 | MTR_5g036950 | 26.773 | 564 | 349 | 13 | 13 | 556 | 22 | 541 | 1.62e-43 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75125.t1 | AT2G07170 | 42.331 | 815 | 434 | 16 | 11 | 812 | 25 | 816 | 0.0 | 573 |
| MS.gene75125.t1 | AT1G27210 | 30.669 | 538 | 325 | 12 | 12 | 548 | 34 | 524 | 1.56e-52 | 194 |
| MS.gene75125.t1 | AT4G27060 | 36.949 | 295 | 177 | 4 | 12 | 299 | 41 | 333 | 4.59e-49 | 187 |
| MS.gene75125.t1 | AT4G27060 | 21.858 | 366 | 229 | 12 | 494 | 814 | 504 | 857 | 2.70e-19 | 94.0 |
| MS.gene75125.t1 | AT1G50890 | 33.218 | 289 | 182 | 5 | 12 | 291 | 36 | 322 | 5.28e-44 | 171 |
| MS.gene75125.t1 | AT1G50890 | 24.731 | 279 | 193 | 7 | 501 | 772 | 503 | 771 | 8.46e-17 | 85.5 |
| MS.gene75125.t1 | AT1G59850 | 33.333 | 282 | 181 | 2 | 12 | 291 | 21 | 297 | 7.23e-37 | 145 |
| MS.gene75125.t1 | AT5G62580 | 32.056 | 287 | 181 | 5 | 14 | 290 | 7 | 289 | 2.77e-34 | 140 |
| MS.gene75125.t1 | AT5G62580 | 32.056 | 287 | 181 | 5 | 14 | 290 | 7 | 289 | 2.77e-34 | 140 |
Find 157 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTTCTTGTCATCTTTA+AGG | 0.084954 | 6.3:+84549872 | MS.gene75125:CDS |
| TTTAGGATCCTGCATCTTTA+TGG | 0.153457 | 6.3:-84550897 | None:intergenic |
| AAATTATCCTCTCTGACTTT+TGG | 0.155108 | 6.3:-84551784 | None:intergenic |
| TTGGCTCTGCCTCACAAATT+TGG | 0.181166 | 6.3:-84551572 | None:intergenic |
| CACAACATTGATGTGTAATT+TGG | 0.196160 | 6.3:-84550952 | None:intergenic |
| AACAACCGCAGCAACAATTT+TGG | 0.226264 | 6.3:-84549395 | None:intergenic |
| ATGGATAAACTTTCTATAAC+TGG | 0.262628 | 6.3:-84552045 | None:intergenic |
| TCCTGGGAGAAGCGACATTT+TGG | 0.275170 | 6.3:-84551591 | None:intergenic |
| GTTGAATAGGTGTATTATTC+AGG | 0.277892 | 6.3:+84549720 | MS.gene75125:CDS |
| GGTGAAAAGTAGTGAAAGTT+TGG | 0.278968 | 6.3:+84551675 | MS.gene75125:CDS |
| CAGGATGTGGGTTATGAATA+TGG | 0.288308 | 6.3:+84550719 | MS.gene75125:CDS |
| TTCGTTCTTGTCATCTTTAA+GGG | 0.289104 | 6.3:+84549873 | MS.gene75125:CDS |
| TTATCTCAAGAATCTTTAAA+AGG | 0.289916 | 6.3:+84551523 | MS.gene75125:CDS |
| TAAATATTGGAAAATGCTTC+CGG | 0.292412 | 6.3:+84550077 | MS.gene75125:CDS |
| ACAACATTGATGTGTAATTT+GGG | 0.297728 | 6.3:-84550951 | None:intergenic |
| TACTCTCAAACTCTTCATTA+TGG | 0.299131 | 6.3:-84550646 | None:intergenic |
| CTGCTGCAGCCATGGGATTA+TGG | 0.311128 | 6.3:-84552133 | None:intergenic |
| CACTTTAGCACCGTATCTTC+TGG | 0.313958 | 6.3:+84552092 | MS.gene75125:CDS |
| AACGGTTTGCTTCTCACATT+TGG | 0.314748 | 6.3:-84550839 | None:intergenic |
| AGATCTAAACTCTGCATATA+TGG | 0.315587 | 6.3:+84551966 | MS.gene75125:CDS |
| AACGTGCCAATCATCTCTTT+TGG | 0.320011 | 6.3:-84550585 | None:intergenic |
| ATTGAAAGAGCAATGCAATT+TGG | 0.320218 | 6.3:-84552584 | None:intergenic |
| CAATAAAATTACATCATATC+TGG | 0.334865 | 6.3:+84552699 | MS.gene75125:CDS |
| CCAACAAGAGCATCGAAAAT+AGG | 0.336403 | 6.3:-84549538 | None:intergenic |
| GAGAATTGTTTCGAGTTCTT+TGG | 0.336737 | 6.3:-84549224 | None:intergenic |
| CACGCGGAATCCTCCTGTTT+CGG | 0.343898 | 6.3:+84549621 | MS.gene75125:CDS |
| TGTGAGAAGCAAACCGTTAG+AGG | 0.344735 | 6.3:+84550844 | MS.gene75125:CDS |
| CTAGTTTCTGAAGATGGCTT+TGG | 0.352507 | 6.3:-84551628 | None:intergenic |
| CCAAGCCTACCATTCTTGAT+TGG | 0.357127 | 6.3:-84551483 | None:intergenic |
| ACTACCGAGCCTTCAGAAAC+TGG | 0.367334 | 6.3:+84550108 | MS.gene75125:CDS |
| AAACATGATGCATCAGTTAC+AGG | 0.369760 | 6.3:+84551039 | MS.gene75125:CDS |
| TTCCACTACAGAATGTGTTC+TGG | 0.378816 | 6.3:-84550621 | None:intergenic |
| AGGATAATTTGAACTGCTTA+GGG | 0.382496 | 6.3:+84551797 | MS.gene75125:CDS |
| GAGGATAATTTGAACTGCTT+AGG | 0.390712 | 6.3:+84551796 | MS.gene75125:CDS |
| ACCATTTCTAGCATTGGTTC+TGG | 0.391155 | 6.3:-84551884 | None:intergenic |
| GAGCCTAACATCTCTATGTC+TGG | 0.402134 | 6.3:-84550474 | None:intergenic |
| GATCGAGACACACACGATAT+CGG | 0.403024 | 6.3:+84549199 | MS.gene75125:CDS |
| TTAGTACTAGTTTCTGAAGA+TGG | 0.408101 | 6.3:-84551634 | None:intergenic |
| TGGAGTGCATACGGAGATCC+TGG | 0.410874 | 6.3:-84551608 | None:intergenic |
| ATACCATACAAAACCGAAAC+AGG | 0.420721 | 6.3:-84549634 | None:intergenic |
| CCAGTAGTTTGTGTTACTCT+CGG | 0.422069 | 6.3:-84551914 | None:intergenic |
| CAAATGAAATGACTTGTATT+CGG | 0.426495 | 6.3:+84550984 | MS.gene75125:CDS |
| TTCAGATATTGAAATCAAAC+AGG | 0.427865 | 6.3:+84551015 | MS.gene75125:CDS |
| CACAATGCATTAAACAAAGT+TGG | 0.432006 | 6.3:+84549175 | MS.gene75125:CDS |
| TTGCTTCTCACATTTGGCTT+CGG | 0.433575 | 6.3:-84550833 | None:intergenic |
| AAATATTGGAAAATGCTTCC+GGG | 0.434596 | 6.3:+84550078 | MS.gene75125:CDS |
| CTGCGTTGATTGAGTTGAAT+AGG | 0.437729 | 6.3:+84549707 | MS.gene75125:CDS |
| TATATGGAAGCTTTGTGTTC+CGG | 0.441349 | 6.3:+84551982 | MS.gene75125:CDS |
| ATTACTACTCAGCTTGTTGT+TGG | 0.446978 | 6.3:-84549131 | None:intergenic |
| CCTTCTCTAACAGAAGAATC+TGG | 0.448809 | 6.3:-84549433 | None:intergenic |
| TTCTTGATTGGATTGTAGAA+AGG | 0.451684 | 6.3:-84551471 | None:intergenic |
| GCTTTGAAATTAGCGAATCA+AGG | 0.460154 | 6.3:+84549481 | MS.gene75125:CDS |
| AGGAATGAGGAGATGGAATG+TGG | 0.463881 | 6.3:-84549259 | None:intergenic |
| AGGGTTTGAAAGATACGGAT+TGG | 0.465253 | 6.3:+84549797 | MS.gene75125:CDS |
| CAGTAGTTTGTGTTACTCTC+GGG | 0.467032 | 6.3:-84551913 | None:intergenic |
| TCCACTACAGAATGTGTTCT+GGG | 0.471821 | 6.3:-84550620 | None:intergenic |
| TAGAGAGGGTTTGAAAGATA+CGG | 0.472957 | 6.3:+84549792 | MS.gene75125:CDS |
| AAAGCGGCTTCTGTTGCGTT+GGG | 0.473923 | 6.3:+84549829 | MS.gene75125:CDS |
| GAGCAAAGGTAAACCTTTGA+AGG | 0.475464 | 6.3:-84550136 | None:intergenic |
| AACATCTCTATGTCTGGATT+CGG | 0.475612 | 6.3:-84550468 | None:intergenic |
| AATCCAGACATAGAGATGTT+AGG | 0.476859 | 6.3:+84550471 | MS.gene75125:CDS |
| TCTTGATTGGATTGTAGAAA+GGG | 0.477546 | 6.3:-84551470 | None:intergenic |
| AACTTGCCTGCTGCAGCCAT+GGG | 0.477757 | 6.3:-84552140 | None:intergenic |
| GCAAGAGAGGAATGAGGAGA+TGG | 0.478087 | 6.3:-84549266 | None:intergenic |
| AGGACAACCATTTCTAGCAT+TGG | 0.479539 | 6.3:-84551890 | None:intergenic |
| GAAACTGGATCCTCCTTCAA+AGG | 0.479927 | 6.3:+84550123 | MS.gene75125:CDS |
| GAAACTAGTACTAAGCAATC+AGG | 0.487912 | 6.3:+84551643 | MS.gene75125:CDS |
| CATTGTTTACAAAGCAGTCA+TGG | 0.488796 | 6.3:-84550805 | None:intergenic |
| ACATCAATGTTGTGTACAAA+GGG | 0.488994 | 6.3:+84550961 | MS.gene75125:CDS |
| GAACTTGCCTGCTGCAGCCA+TGG | 0.490305 | 6.3:-84552141 | None:intergenic |
| ACTTAATATGAAATCAACTA+CGG | 0.491293 | 6.3:+84550502 | MS.gene75125:CDS |
| CCAATCAAGAATGGTAGGCT+TGG | 0.497219 | 6.3:+84551483 | MS.gene75125:CDS |
| TAAAGCGGCTTCTGTTGCGT+TGG | 0.497925 | 6.3:+84549828 | MS.gene75125:CDS |
| TAAACTTTCTATAACTGGAC+CGG | 0.499508 | 6.3:-84552040 | None:intergenic |
| GCCAAAATGTCGCTTCTCCC+AGG | 0.502514 | 6.3:+84551590 | MS.gene75125:CDS |
| GTCATCCCAAAAGAGATGAT+TGG | 0.502641 | 6.3:+84550579 | MS.gene75125:CDS |
| CATAATCCCATGGCTGCAGC+AGG | 0.504288 | 6.3:+84552134 | MS.gene75125:CDS |
| AAAGCATGTCAAAATGATGT+TGG | 0.506304 | 6.3:+84550548 | MS.gene75125:CDS |
| TCTGCTCAAGTGAGAAAGAA+TGG | 0.511359 | 6.3:+84551841 | MS.gene75125:CDS |
| CCGAGAGTAACACAAACTAC+TGG | 0.513150 | 6.3:+84551914 | MS.gene75125:CDS |
| GTTGAGCTTCTGAATAAAAC+CGG | 0.517186 | 6.3:+84552021 | MS.gene75125:CDS |
| ACTCATTGTTTGTAGCGGCT+TGG | 0.517709 | 6.3:-84550678 | None:intergenic |
| TGTAAAACCGCATCCCTCAC+TGG | 0.518045 | 6.3:-84550048 | None:intergenic |
| GCCAGAACCAATGCTAGAAA+TGG | 0.519664 | 6.3:+84551883 | MS.gene75125:CDS |
| CAACTTATTACTTCCTCTAA+CGG | 0.520424 | 6.3:-84550857 | None:intergenic |
| CCAGATTCTTCTGTTAGAGA+AGG | 0.522317 | 6.3:+84549433 | MS.gene75125:CDS |
| CACATCAATGTTGTGTACAA+AGG | 0.523686 | 6.3:+84550960 | MS.gene75125:CDS |
| TCTATGTCTGGATTCGGAGG+TGG | 0.527830 | 6.3:-84550462 | None:intergenic |
| AATAGGTGTATTATTCAGGC+TGG | 0.528873 | 6.3:+84549724 | MS.gene75125:CDS |
| TTCTACAATCCAATCAAGAA+TGG | 0.529982 | 6.3:+84551474 | MS.gene75125:CDS |
| TGTTACAAGCATGCAGGATG+TGG | 0.535835 | 6.3:+84550706 | MS.gene75125:CDS |
| AATGTACTCCATAAAGATGC+AGG | 0.536807 | 6.3:+84550889 | MS.gene75125:CDS |
| AAGGAGGATCCAGTTTCTGA+AGG | 0.539883 | 6.3:-84550117 | None:intergenic |
| TGTAATTTGGGGACTTGACT+CGG | 0.540972 | 6.3:-84550939 | None:intergenic |
| CTCCAGCATGAATCCTCGGT+TGG | 0.542014 | 6.3:-84551720 | None:intergenic |
| TGGGCCTATGGATGACAAGC+AGG | 0.545178 | 6.3:+84550739 | MS.gene75125:CDS |
| CATGACTGCTTTGTAAACAA+TGG | 0.547183 | 6.3:+84550806 | MS.gene75125:CDS |
| AGATGGCTTTGGAGTGCATA+CGG | 0.548202 | 6.3:-84551617 | None:intergenic |
| GGGTTATGAATATGGGCCTA+TGG | 0.549080 | 6.3:+84550727 | MS.gene75125:CDS |
| GAATCAAGGTAATGAAGATA+AGG | 0.552496 | 6.3:+84549495 | MS.gene75125:CDS |
| ATTGTTTACAAAGCAGTCAT+GGG | 0.553394 | 6.3:-84550804 | None:intergenic |
| CTTAATATGAAATCAACTAC+GGG | 0.555405 | 6.3:+84550503 | MS.gene75125:CDS |
| CTATCTCCAGCATGAATCCT+CGG | 0.562259 | 6.3:-84551724 | None:intergenic |
| TCTCAAGAATCTTTAAAAGG+AGG | 0.564666 | 6.3:+84551526 | MS.gene75125:CDS |
| AGCATTGGTTCTGGCAGCAG+AGG | 0.565867 | 6.3:-84551875 | None:intergenic |
| CAGAAAACTCCAAATTTGTG+AGG | 0.569734 | 6.3:+84551563 | MS.gene75125:CDS |
| ATCTCTATGTCTGGATTCGG+AGG | 0.570233 | 6.3:-84550465 | None:intergenic |
| ACAATCCAATCAAGAATGGT+AGG | 0.573841 | 6.3:+84551478 | MS.gene75125:CDS |
| GCAGGTTTCGCCATAAAATG+TGG | 0.574624 | 6.3:-84549688 | None:intergenic |
| AGGATGTGGGTTATGAATAT+GGG | 0.575148 | 6.3:+84550720 | MS.gene75125:CDS |
| GGCTGTTGGTAGTATTAGAG+AGG | 0.583720 | 6.3:+84549777 | MS.gene75125:CDS |
| AGCCAACCGAGGATTCATGC+TGG | 0.584954 | 6.3:+84551718 | MS.gene75125:CDS |
| TGATTCCTCGAGGTTTGACA+AGG | 0.586369 | 6.3:+84549915 | MS.gene75125:CDS |
| GGATCCAGTTTCTGAAGGCT+CGG | 0.586766 | 6.3:-84550112 | None:intergenic |
| AGGTTGTATTGAAATGTTCG+CGG | 0.587532 | 6.3:+84549453 | MS.gene75125:CDS |
| TTCATTCTCTTGATTCCTCG+AGG | 0.588058 | 6.3:+84549905 | MS.gene75125:CDS |
| AGGTGTATTATTCAGGCTGG+TGG | 0.594436 | 6.3:+84549727 | MS.gene75125:CDS |
| GAGAATGCAAGAGAGGAATG+AGG | 0.599531 | 6.3:-84549272 | None:intergenic |
| TCAAGACTCATTGTTTGTAG+CGG | 0.603027 | 6.3:-84550683 | None:intergenic |
| AACGAGAATAAGTTCGTCAC+CGG | 0.604731 | 6.3:-84552001 | None:intergenic |
| GGAGTGCATACGGAGATCCT+GGG | 0.608022 | 6.3:-84551607 | None:intergenic |
| CCCCAGAACACATTCTGTAG+TGG | 0.608984 | 6.3:+84550619 | MS.gene75125:CDS |
| CAACATTGATGTGTAATTTG+GGG | 0.611777 | 6.3:-84550950 | None:intergenic |
| AATGCAATTTGGTCCGTGGA+CGG | 0.613979 | 6.3:-84552573 | None:intergenic |
| TTAGCACCGTATCTTCTGGA+AGG | 0.614062 | 6.3:+84552096 | MS.gene75125:CDS |
| GGTGAAACCAGTGAGGGATG+CGG | 0.615202 | 6.3:+84550041 | MS.gene75125:intron |
| GGATAATTTGAACTGCTTAG+GGG | 0.616156 | 6.3:+84551798 | MS.gene75125:CDS |
| GATTCATGCTGGAGATAGTG+TGG | 0.617649 | 6.3:+84551729 | MS.gene75125:CDS |
| TAATTTGAACTGCTTAGGGG+AGG | 0.618224 | 6.3:+84551801 | MS.gene75125:CDS |
| GTTGAAATGAGCACCGTCCA+CGG | 0.618871 | 6.3:+84552560 | MS.gene75125:CDS |
| GAGCAATGCAATTTGGTCCG+TGG | 0.621953 | 6.3:-84552577 | None:intergenic |
| TCTCACCAAAATTGTTGCTG+CGG | 0.626501 | 6.3:+84549390 | MS.gene75125:CDS |
| GGATATGTGTAAAAGTTACA+AGG | 0.626865 | 6.3:+84551750 | MS.gene75125:CDS |
| ATATGAAATCAACTACGGGA+AGG | 0.627700 | 6.3:+84550507 | MS.gene75125:CDS |
| GCTGTTGGTAGTATTAGAGA+GGG | 0.629368 | 6.3:+84549778 | MS.gene75125:CDS |
| GAATGTCGAGAATGCAAGAG+AGG | 0.629620 | 6.3:-84549279 | None:intergenic |
| GGCTCGGTAGTATAATGACC+CGG | 0.630775 | 6.3:-84550096 | None:intergenic |
| CACTCCTGCTTGTCATCCAT+AGG | 0.633163 | 6.3:-84550743 | None:intergenic |
| CTTTCTACAGAAAATATCTG+TGG | 0.635909 | 6.3:+84550407 | MS.gene75125:intron |
| TGGAATGTGGAGTTAATGAG+TGG | 0.637506 | 6.3:-84549246 | None:intergenic |
| TCTTGATGTTACAAGCATGC+AGG | 0.641520 | 6.3:+84550700 | MS.gene75125:CDS |
| TAGTTTGTGTTACTCTCGGG+AGG | 0.642716 | 6.3:-84551910 | None:intergenic |
| GGATTGGAAAACACGTAAAG+CGG | 0.647564 | 6.3:+84549813 | MS.gene75125:CDS |
| TCTACAGAAAATATCTGTGG+AGG | 0.648414 | 6.3:+84550410 | MS.gene75125:intron |
| TATAAGAGATTCATAAACAG+TGG | 0.652703 | 6.3:-84549359 | None:intergenic |
| ATTATAGGTGAAACCAGTGA+GGG | 0.652743 | 6.3:+84550035 | MS.gene75125:intron |
| CAAAGGTAAACCTTTGAAGG+AGG | 0.653235 | 6.3:-84550133 | None:intergenic |
| CTATTCAACTCAATCAACGC+AGG | 0.655568 | 6.3:-84549706 | None:intergenic |
| CCATACAAAACCGAAACAGG+AGG | 0.673672 | 6.3:-84549631 | None:intergenic |
| CTGGTATTGTACAAAACACG+CGG | 0.674579 | 6.3:+84549605 | MS.gene75125:CDS |
| GTTACAAGCATGCAGGATGT+GGG | 0.676382 | 6.3:+84550707 | MS.gene75125:CDS |
| GACTGCCCCAAAAGTCAGAG+AGG | 0.694271 | 6.3:+84551777 | MS.gene75125:CDS |
| TATCTGTGGAGGTGACTCTG+TGG | 0.695673 | 6.3:+84550421 | MS.gene75125:CDS |
| GATTATAGGTGAAACCAGTG+AGG | 0.696142 | 6.3:+84550034 | MS.gene75125:intron |
| CCACTACAGAATGTGTTCTG+GGG | 0.711381 | 6.3:-84550619 | None:intergenic |
| GTGAATCGTCTTGTATGTGA+AGG | 0.716670 | 6.3:+84551943 | MS.gene75125:CDS |
| AATCACCTTGTCAAACCTCG+AGG | 0.724129 | 6.3:-84549920 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAATAACTAATTA+AGG | + | chr6.3:84552220-84552239 | MS.gene75125:intron | 10.0% |
| !! | ATATATTAATAATCGATTAT+AGG | + | chr6.3:84550020-84550039 | MS.gene75125:intron | 10.0% |
| !! | GAAAGTTAATAATGTATTTA+TGG | + | chr6.3:84552734-84552753 | MS.gene75125:intron | 15.0% |
| !! | TACACTTATAATTTAGTTAA+CGG | - | chr6.3:84550001-84550020 | None:intergenic | 15.0% |
| !!! | AATATGAATATTGTAACTTT+TGG | + | chr6.3:84551317-84551336 | MS.gene75125:intron | 15.0% |
| !!! | TAATTTTTATTTTCTTCTGA+TGG | + | chr6.3:84552342-84552361 | MS.gene75125:intron | 15.0% |
| !!! | TTGATTTCATATTAAGTTTT+TGG | - | chr6.3:84550499-84550518 | None:intergenic | 15.0% |
| !! | ACTTAATATGAAATCAACTA+CGG | + | chr6.3:84550502-84550521 | MS.gene75125:CDS | 20.0% |
| !! | AGGATATATATAAAGACATT+TGG | + | chr6.3:84550209-84550228 | MS.gene75125:intron | 20.0% |
| !! | CAATAAAATTACATCATATC+TGG | + | chr6.3:84552699-84552718 | MS.gene75125:CDS | 20.0% |
| !! | GATATCAAAATTCAAAAAGA+GGG | - | chr6.3:84550167-84550186 | None:intergenic | 20.0% |
| !! | TGATATCAAAATTCAAAAAG+AGG | - | chr6.3:84550168-84550187 | None:intergenic | 20.0% |
| !! | TTATCTCAAGAATCTTTAAA+AGG | + | chr6.3:84551523-84551542 | MS.gene75125:CDS | 20.0% |
| !! | TTTGATATCAATATTGCTAT+TGG | + | chr6.3:84550178-84550197 | MS.gene75125:intron | 20.0% |
| !!! | TTTTACAAGCTCTTAAATAT+TGG | + | chr6.3:84550064-84550083 | MS.gene75125:CDS | 20.0% |
| ! | AAACAAGAACACTATCTAAT+TGG | - | chr6.3:84550249-84550268 | None:intergenic | 25.0% |
| ! | AACAAGAACACTATCTAATT+GGG | - | chr6.3:84550248-84550267 | None:intergenic | 25.0% |
| ! | ACAACATTGATGTGTAATTT+GGG | - | chr6.3:84550954-84550973 | None:intergenic | 25.0% |
| ! | ATAAATGAGCTACTGTATAT+CGG | - | chr6.3:84551140-84551159 | None:intergenic | 25.0% |
| ! | ATGGATAAACTTTCTATAAC+TGG | - | chr6.3:84552048-84552067 | None:intergenic | 25.0% |
| ! | CTTAATATGAAATCAACTAC+GGG | + | chr6.3:84550503-84550522 | MS.gene75125:CDS | 25.0% |
| ! | GTTAAACAATTTAATAACCC+AGG | - | chr6.3:84552436-84552455 | None:intergenic | 25.0% |
| ! | TAAATATTGGAAAATGCTTC+CGG | + | chr6.3:84550077-84550096 | MS.gene75125:CDS | 25.0% |
| ! | TATAAGAGATTCATAAACAG+TGG | - | chr6.3:84549362-84549381 | None:intergenic | 25.0% |
| ! | TTCAGATATTGAAATCAAAC+AGG | + | chr6.3:84551015-84551034 | MS.gene75125:CDS | 25.0% |
| !! | AATGCTTTGAATACCATTTA+AGG | - | chr6.3:84552283-84552302 | None:intergenic | 25.0% |
| !! | ATATCAATATTGCTATTGGT+TGG | + | chr6.3:84550182-84550201 | MS.gene75125:intron | 25.0% |
| !! | CAAATGAAATGACTTGTATT+CGG | + | chr6.3:84550984-84551003 | MS.gene75125:CDS | 25.0% |
| !! | TGATTGCTATTCTTATACAT+TGG | + | chr6.3:84550356-84550375 | MS.gene75125:intron | 25.0% |
| !! | TGGAAAAAAGATCATTTTCA+AGG | + | chr6.3:84551695-84551714 | MS.gene75125:CDS | 25.0% |
| !! | TTTGAGAGATTGTTTTCTAA+TGG | - | chr6.3:84549323-84549342 | None:intergenic | 25.0% |
| !!! | AAATTTGGAGTTTTCTGAAA+AGG | - | chr6.3:84551560-84551579 | None:intergenic | 25.0% |
| !!! | ATCATTGATAATGCAAATGT+AGG | + | chr6.3:84552457-84552476 | MS.gene75125:intron | 25.0% |
| !!! | ATGTTAGTCTTTCTTGTTTT+AGG | + | chr6.3:84552535-84552554 | MS.gene75125:intron | 25.0% |
| !!! | CTTTTTCAGATTTTTACAAC+TGG | + | chr6.3:84551436-84551455 | MS.gene75125:intron | 25.0% |
| !!! | TTTTGTATGGTATGTTGATT+AGG | + | chr6.3:84549644-84549663 | MS.gene75125:CDS | 25.0% |
| AAAGCATGTCAAAATGATGT+TGG | + | chr6.3:84550548-84550567 | MS.gene75125:CDS | 30.0% | |
| AAATAACTGATATACTTCCC+AGG | - | chr6.3:84552515-84552534 | None:intergenic | 30.0% | |
| AAATATTGGAAAATGCTTCC+GGG | + | chr6.3:84550078-84550097 | MS.gene75125:CDS | 30.0% | |
| ACATCAATGTTGTGTACAAA+GGG | + | chr6.3:84550961-84550980 | MS.gene75125:CDS | 30.0% | |
| AGATCTAAACTCTGCATATA+TGG | + | chr6.3:84551966-84551985 | MS.gene75125:CDS | 30.0% | |
| AGGATAATTTGAACTGCTTA+GGG | + | chr6.3:84551797-84551816 | MS.gene75125:CDS | 30.0% | |
| ATTGAAAGAGCAATGCAATT+TGG | - | chr6.3:84552587-84552606 | None:intergenic | 30.0% | |
| ATTGTTTACAAAGCAGTCAT+GGG | - | chr6.3:84550807-84550826 | None:intergenic | 30.0% | |
| CAACATTGATGTGTAATTTG+GGG | - | chr6.3:84550953-84550972 | None:intergenic | 30.0% | |
| CAACTTATTACTTCCTCTAA+CGG | - | chr6.3:84550860-84550879 | None:intergenic | 30.0% | |
| CACAACATTGATGTGTAATT+TGG | - | chr6.3:84550955-84550974 | None:intergenic | 30.0% | |
| CACAATGCATTAAACAAAGT+TGG | + | chr6.3:84549175-84549194 | MS.gene75125:CDS | 30.0% | |
| CTTTCTACAGAAAATATCTG+TGG | + | chr6.3:84550407-84550426 | MS.gene75125:intron | 30.0% | |
| GAATCAAGGTAATGAAGATA+AGG | + | chr6.3:84549495-84549514 | MS.gene75125:CDS | 30.0% | |
| GGATATGTGTAAAAGTTACA+AGG | + | chr6.3:84551750-84551769 | MS.gene75125:CDS | 30.0% | |
| GTTGAATAGGTGTATTATTC+AGG | + | chr6.3:84549720-84549739 | MS.gene75125:CDS | 30.0% | |
| TAAACTTTCTATAACTGGAC+CGG | - | chr6.3:84552043-84552062 | None:intergenic | 30.0% | |
| TACTCTCAAACTCTTCATTA+TGG | - | chr6.3:84550649-84550668 | None:intergenic | 30.0% | |
| TCTTGATTGGATTGTAGAAA+GGG | - | chr6.3:84551473-84551492 | None:intergenic | 30.0% | |
| TTCGTTCTTGTCATCTTTAA+GGG | + | chr6.3:84549873-84549892 | MS.gene75125:CDS | 30.0% | |
| TTCTACAATCCAATCAAGAA+TGG | + | chr6.3:84551474-84551493 | MS.gene75125:CDS | 30.0% | |
| TTCTTGATTGGATTGTAGAA+AGG | - | chr6.3:84551474-84551493 | None:intergenic | 30.0% | |
| ! | AAATTATCCTCTCTGACTTT+TGG | - | chr6.3:84551787-84551806 | None:intergenic | 30.0% |
| ! | AAGAACATTGACAGTTTTCA+TGG | - | chr6.3:84552067-84552086 | None:intergenic | 30.0% |
| ! | AATTATCCTCTCTGACTTTT+GGG | - | chr6.3:84551786-84551805 | None:intergenic | 30.0% |
| ! | AGAGATTGTTTTCTAATGGA+AGG | - | chr6.3:84549319-84549338 | None:intergenic | 30.0% |
| ! | ATTGTATTTTTCACATGGCA+TGG | - | chr6.3:84552381-84552400 | None:intergenic | 30.0% |
| ! | ATTTGAAGTAATGTCCGAAA+TGG | + | chr6.3:84551359-84551378 | MS.gene75125:intron | 30.0% |
| ! | ATTTTTCCTTCCAGAAGATA+CGG | - | chr6.3:84552105-84552124 | None:intergenic | 30.0% |
| ! | GATTTTTACAACTGGCATAA+TGG | + | chr6.3:84551444-84551463 | MS.gene75125:intron | 30.0% |
| ! | GCTTAAGAATCCACATTTTA+TGG | + | chr6.3:84549678-84549697 | MS.gene75125:CDS | 30.0% |
| ! | GCTTTTATATGCAATTCAAG+AGG | + | chr6.3:84552622-84552641 | MS.gene75125:CDS | 30.0% |
| ! | TATTGCTATTGGTTGGAATA+AGG | + | chr6.3:84550189-84550208 | MS.gene75125:intron | 30.0% |
| ! | TCTAATGGAAGGTTTTTGTT+CGG | - | chr6.3:84549308-84549327 | None:intergenic | 30.0% |
| ! | TCTCAAGAATCTTTAAAAGG+AGG | + | chr6.3:84551526-84551545 | MS.gene75125:CDS | 30.0% |
| ! | TGCACATTGTATTTTTCACA+TGG | - | chr6.3:84552386-84552405 | None:intergenic | 30.0% |
| ! | TGCGGTTGTTAAATGTTTTA+GGG | + | chr6.3:84549408-84549427 | MS.gene75125:CDS | 30.0% |
| ! | TTAGTACTAGTTTCTGAAGA+TGG | - | chr6.3:84551637-84551656 | None:intergenic | 30.0% |
| ! | TTTTCAATACCATAATCCCA+TGG | + | chr6.3:84552124-84552143 | MS.gene75125:CDS | 30.0% |
| !! | GTATCTAAGACATTTTCTGT+GGG | + | chr6.3:84552769-84552788 | MS.gene75125:intron | 30.0% |
| !! | TATCTAAGACATTTTCTGTG+GGG | + | chr6.3:84552770-84552789 | MS.gene75125:intron | 30.0% |
| !! | TGTATCTAAGACATTTTCTG+TGG | + | chr6.3:84552768-84552787 | MS.gene75125:intron | 30.0% |
| AAACATGATGCATCAGTTAC+AGG | + | chr6.3:84551039-84551058 | MS.gene75125:CDS | 35.0% | |
| AACATCTCTATGTCTGGATT+CGG | - | chr6.3:84550471-84550490 | None:intergenic | 35.0% | |
| AATAGGTGTATTATTCAGGC+TGG | + | chr6.3:84549724-84549743 | MS.gene75125:CDS | 35.0% | |
| AATATATACCACATACCGTG+TGG | - | chr6.3:84551396-84551415 | None:intergenic | 35.0% | |
| AATCCAGACATAGAGATGTT+AGG | + | chr6.3:84550471-84550490 | MS.gene75125:CDS | 35.0% | |
| AATGTACTCCATAAAGATGC+AGG | + | chr6.3:84550889-84550908 | MS.gene75125:CDS | 35.0% | |
| ACAAGGTGATTTCTCACTTT+CGG | + | chr6.3:84549932-84549951 | MS.gene75125:intron | 35.0% | |
| ACAATCCAATCAAGAATGGT+AGG | + | chr6.3:84551478-84551497 | MS.gene75125:CDS | 35.0% | |
| AGGTTGTATTGAAATGTTCG+CGG | + | chr6.3:84549453-84549472 | MS.gene75125:CDS | 35.0% | |
| ATACCATACAAAACCGAAAC+AGG | - | chr6.3:84549637-84549656 | None:intergenic | 35.0% | |
| ATATGAAATCAACTACGGGA+AGG | + | chr6.3:84550507-84550526 | MS.gene75125:CDS | 35.0% | |
| ATTATAGGTGAAACCAGTGA+GGG | + | chr6.3:84550035-84550054 | MS.gene75125:intron | 35.0% | |
| CACATCAATGTTGTGTACAA+AGG | + | chr6.3:84550960-84550979 | MS.gene75125:CDS | 35.0% | |
| CAGAAAACTCCAAATTTGTG+AGG | + | chr6.3:84551563-84551582 | MS.gene75125:CDS | 35.0% | |
| CATGACTGCTTTGTAAACAA+TGG | + | chr6.3:84550806-84550825 | MS.gene75125:CDS | 35.0% | |
| CATTGTTTACAAAGCAGTCA+TGG | - | chr6.3:84550808-84550827 | None:intergenic | 35.0% | |
| CTTCGTTCTTGTCATCTTTA+AGG | + | chr6.3:84549872-84549891 | MS.gene75125:CDS | 35.0% | |
| GAAACTAGTACTAAGCAATC+AGG | + | chr6.3:84551643-84551662 | MS.gene75125:CDS | 35.0% | |
| GAGGATAATTTGAACTGCTT+AGG | + | chr6.3:84551796-84551815 | MS.gene75125:CDS | 35.0% | |
| GATATACTTCCCAGGTTATT+CGG | - | chr6.3:84552507-84552526 | None:intergenic | 35.0% | |
| GGATAATTTGAACTGCTTAG+GGG | + | chr6.3:84551798-84551817 | MS.gene75125:CDS | 35.0% | |
| GGTGAAAAGTAGTGAAAGTT+TGG | + | chr6.3:84551675-84551694 | MS.gene75125:CDS | 35.0% | |
| GTTGAGCTTCTGAATAAAAC+CGG | + | chr6.3:84552021-84552040 | MS.gene75125:CDS | 35.0% | |
| TAGAGAGGGTTTGAAAGATA+CGG | + | chr6.3:84549792-84549811 | MS.gene75125:CDS | 35.0% | |
| TCAAGACTCATTGTTTGTAG+CGG | - | chr6.3:84550686-84550705 | None:intergenic | 35.0% | |
| TCTACAGAAAATATCTGTGG+AGG | + | chr6.3:84550410-84550429 | MS.gene75125:intron | 35.0% | |
| TGGTGTAACAAGAACCATTT+CGG | - | chr6.3:84551376-84551395 | None:intergenic | 35.0% | |
| ! | ACATTTTTGTTGCATCTTCG+TGG | + | chr6.3:84552253-84552272 | MS.gene75125:intron | 35.0% |
| ! | ACTGTCGAATCAGAACTTTT+AGG | - | chr6.3:84550917-84550936 | None:intergenic | 35.0% |
| ! | AGGATGTGGGTTATGAATAT+GGG | + | chr6.3:84550720-84550739 | MS.gene75125:CDS | 35.0% |
| ! | ATTATCCTCTCTGACTTTTG+GGG | - | chr6.3:84551785-84551804 | None:intergenic | 35.0% |
| ! | CATGCTTTTCTTACAGACAA+AGG | - | chr6.3:84550536-84550555 | None:intergenic | 35.0% |
| ! | CATGTAGTGGAAAGTAAACA+AGG | - | chr6.3:84551176-84551195 | None:intergenic | 35.0% |
| ! | CTGCGGTTGTTAAATGTTTT+AGG | + | chr6.3:84549407-84549426 | MS.gene75125:CDS | 35.0% |
| ! | TATATGGAAGCTTTGTGTTC+CGG | + | chr6.3:84551982-84552001 | MS.gene75125:CDS | 35.0% |
| ! | TTTAGGATCCTGCATCTTTA+TGG | - | chr6.3:84550900-84550919 | None:intergenic | 35.0% |
| !! | ATCTAAGACATTTTCTGTGG+GGG | + | chr6.3:84552771-84552790 | MS.gene75125:intron | 35.0% |
| !! | ATTACTACTCAGCTTGTTGT+TGG | - | chr6.3:84549134-84549153 | None:intergenic | 35.0% |
| !! | CAACAATTTTGGTGAGATGT+GGG | - | chr6.3:84549387-84549406 | None:intergenic | 35.0% |
| !! | GAGAATTGTTTCGAGTTCTT+TGG | - | chr6.3:84549227-84549246 | None:intergenic | 35.0% |
| !! | GCTTTGAAATTAGCGAATCA+AGG | + | chr6.3:84549481-84549500 | MS.gene75125:CDS | 35.0% |
| !! | TAAGCAATCAGGCTTGTTTT+CGG | + | chr6.3:84551654-84551673 | MS.gene75125:CDS | 35.0% |
| AAAAGAGGGAGAAAGAGCAA+AGG | - | chr6.3:84550153-84550172 | None:intergenic | 40.0% | |
| AACGAGAATAAGTTCGTCAC+CGG | - | chr6.3:84552004-84552023 | None:intergenic | 40.0% | |
| AGGGTTTGAAAGATACGGAT+TGG | + | chr6.3:84549797-84549816 | MS.gene75125:CDS | 40.0% | |
| ATGGTTCTTGTTACACCACA+CGG | + | chr6.3:84551378-84551397 | MS.gene75125:intron | 40.0% | |
| CCAGATTCTTCTGTTAGAGA+AGG | + | chr6.3:84549433-84549452 | MS.gene75125:CDS | 40.0% | |
| CCTTCTCTAACAGAAGAATC+TGG | - | chr6.3:84549436-84549455 | None:intergenic | 40.0% | |
| CTATTCAACTCAATCAACGC+AGG | - | chr6.3:84549709-84549728 | None:intergenic | 40.0% | |
| CTGGTATTGTACAAAACACG+CGG | + | chr6.3:84549605-84549624 | MS.gene75125:CDS | 40.0% | |
| GAGCAAAGGTAAACCTTTGA+AGG | - | chr6.3:84550139-84550158 | None:intergenic | 40.0% | |
| GATTATAGGTGAAACCAGTG+AGG | + | chr6.3:84550034-84550053 | MS.gene75125:intron | 40.0% | |
| GGATTGGAAAACACGTAAAG+CGG | + | chr6.3:84549813-84549832 | MS.gene75125:CDS | 40.0% | |
| GTCATCCCAAAAGAGATGAT+TGG | + | chr6.3:84550579-84550598 | MS.gene75125:CDS | 40.0% | |
| GTGAATCGTCTTGTATGTGA+AGG | + | chr6.3:84551943-84551962 | MS.gene75125:CDS | 40.0% | |
| TAATTTGAACTGCTTAGGGG+AGG | + | chr6.3:84551801-84551820 | MS.gene75125:CDS | 40.0% | |
| TCCACTACAGAATGTGTTCT+GGG | - | chr6.3:84550623-84550642 | None:intergenic | 40.0% | |
| TCTCACCAAAATTGTTGCTG+CGG | + | chr6.3:84549390-84549409 | MS.gene75125:CDS | 40.0% | |
| TCTGCTCAAGTGAGAAAGAA+TGG | + | chr6.3:84551841-84551860 | MS.gene75125:CDS | 40.0% | |
| TCTTCGTGGCATACCTTAAA+TGG | + | chr6.3:84552267-84552286 | MS.gene75125:intron | 40.0% | |
| TCTTGATGTTACAAGCATGC+AGG | + | chr6.3:84550700-84550719 | MS.gene75125:CDS | 40.0% | |
| TGGAATGTGGAGTTAATGAG+TGG | - | chr6.3:84549249-84549268 | None:intergenic | 40.0% | |
| TGTAATTTGGGGACTTGACT+CGG | - | chr6.3:84550942-84550961 | None:intergenic | 40.0% | |
| TTCATTCTCTTGATTCCTCG+AGG | + | chr6.3:84549905-84549924 | MS.gene75125:CDS | 40.0% | |
| TTCCACTACAGAATGTGTTC+TGG | - | chr6.3:84550624-84550643 | None:intergenic | 40.0% | |
| TTTAATAACCCAGGCCTGTT+TGG | - | chr6.3:84552427-84552446 | None:intergenic | 40.0% | |
| ! | AACAACCGCAGCAACAATTT+TGG | - | chr6.3:84549398-84549417 | None:intergenic | 40.0% |
| ! | AACGGTTTGCTTCTCACATT+TGG | - | chr6.3:84550842-84550861 | None:intergenic | 40.0% |
| ! | AACGTGCCAATCATCTCTTT+TGG | - | chr6.3:84550588-84550607 | None:intergenic | 40.0% |
| ! | ACGTGCCAATCATCTCTTTT+GGG | - | chr6.3:84550587-84550606 | None:intergenic | 40.0% |
| ! | CAAAGGTAAACCTTTGAAGG+AGG | - | chr6.3:84550136-84550155 | None:intergenic | 40.0% |
| ! | CAGGATGTGGGTTATGAATA+TGG | + | chr6.3:84550719-84550738 | MS.gene75125:CDS | 40.0% |
| ! | CAGTAGTTTGTGTTACTCTC+GGG | - | chr6.3:84551916-84551935 | None:intergenic | 40.0% |
| ! | CCAGTAGTTTGTGTTACTCT+CGG | - | chr6.3:84551917-84551936 | None:intergenic | 40.0% |
| ! | CCTATTTTCGATGCTCTTGT+TGG | + | chr6.3:84549538-84549557 | MS.gene75125:CDS | 40.0% |
| ! | CTAGTTTCTGAAGATGGCTT+TGG | - | chr6.3:84551631-84551650 | None:intergenic | 40.0% |
| ! | CTTGAAGCGTTATCATGTAG+TGG | - | chr6.3:84551189-84551208 | None:intergenic | 40.0% |
| ! | TTGCTTCTCACATTTGGCTT+CGG | - | chr6.3:84550836-84550855 | None:intergenic | 40.0% |
| ! | TTTTCAGCCATGCAGAAAAG+AGG | + | chr6.3:84552660-84552679 | MS.gene75125:CDS | 40.0% |
| !! | ACCATTTCTAGCATTGGTTC+TGG | - | chr6.3:84551887-84551906 | None:intergenic | 40.0% |
| !! | AGGACAACCATTTCTAGCAT+TGG | - | chr6.3:84551893-84551912 | None:intergenic | 40.0% |
| !! | ATCGCTTTTACCGAATAACC+TGG | + | chr6.3:84552494-84552513 | MS.gene75125:intron | 40.0% |
| !! | CCAACAAGAGCATCGAAAAT+AGG | - | chr6.3:84549541-84549560 | None:intergenic | 40.0% |
| !! | CTGCGTTGATTGAGTTGAAT+AGG | + | chr6.3:84549707-84549726 | MS.gene75125:CDS | 40.0% |
| !! | GCAACAATTTTGGTGAGATG+TGG | - | chr6.3:84549388-84549407 | None:intergenic | 40.0% |
| !! | GCTGTTGGTAGTATTAGAGA+GGG | + | chr6.3:84549778-84549797 | MS.gene75125:CDS | 40.0% |
| !! | TCGCTTTTACCGAATAACCT+GGG | + | chr6.3:84552495-84552514 | MS.gene75125:intron | 40.0% |
| AAGGAGGATCCAGTTTCTGA+AGG | - | chr6.3:84550120-84550139 | None:intergenic | 45.0% | |
| AATCACCTTGTCAAACCTCG+AGG | - | chr6.3:84549923-84549942 | None:intergenic | 45.0% | |
| AATGCAATTTGGTCCGTGGA+CGG | - | chr6.3:84552576-84552595 | None:intergenic | 45.0% | |
| ACTCATTGTTTGTAGCGGCT+TGG | - | chr6.3:84550681-84550700 | None:intergenic | 45.0% | |
| AGGAATGAGGAGATGGAATG+TGG | - | chr6.3:84549262-84549281 | None:intergenic | 45.0% | |
| AGGTGTATTATTCAGGCTGG+TGG | + | chr6.3:84549727-84549746 | MS.gene75125:CDS | 45.0% | |
| ATCTCTATGTCTGGATTCGG+AGG | - | chr6.3:84550468-84550487 | None:intergenic | 45.0% | |
| CACTTTAGCACCGTATCTTC+TGG | + | chr6.3:84552092-84552111 | MS.gene75125:CDS | 45.0% | |
| CCAAGCCTACCATTCTTGAT+TGG | - | chr6.3:84551486-84551505 | None:intergenic | 45.0% | |
| CCAATCAAGAATGGTAGGCT+TGG | + | chr6.3:84551483-84551502 | MS.gene75125:CDS | 45.0% | |
| CCACTACAGAATGTGTTCTG+GGG | - | chr6.3:84550622-84550641 | None:intergenic | 45.0% | |
| CCATACAAAACCGAAACAGG+AGG | - | chr6.3:84549634-84549653 | None:intergenic | 45.0% | |
| CCGAGAGTAACACAAACTAC+TGG | + | chr6.3:84551914-84551933 | MS.gene75125:CDS | 45.0% | |
| CTATCTCCAGCATGAATCCT+CGG | - | chr6.3:84551727-84551746 | None:intergenic | 45.0% | |
| GAAACTGGATCCTCCTTCAA+AGG | + | chr6.3:84550123-84550142 | MS.gene75125:CDS | 45.0% | |
| GAATGTCGAGAATGCAAGAG+AGG | - | chr6.3:84549282-84549301 | None:intergenic | 45.0% | |
| GAGAATGCAAGAGAGGAATG+AGG | - | chr6.3:84549275-84549294 | None:intergenic | 45.0% | |
| GAGCCTAACATCTCTATGTC+TGG | - | chr6.3:84550477-84550496 | None:intergenic | 45.0% | |
| GATCGAGACACACACGATAT+CGG | + | chr6.3:84549199-84549218 | MS.gene75125:CDS | 45.0% | |
| GATTCATGCTGGAGATAGTG+TGG | + | chr6.3:84551729-84551748 | MS.gene75125:CDS | 45.0% | |
| GCAGGTTTCGCCATAAAATG+TGG | - | chr6.3:84549691-84549710 | None:intergenic | 45.0% | |
| GCCAGAACCAATGCTAGAAA+TGG | + | chr6.3:84551883-84551902 | MS.gene75125:CDS | 45.0% | |
| GGGTTATGAATATGGGCCTA+TGG | + | chr6.3:84550727-84550746 | MS.gene75125:CDS | 45.0% | |
| GTTACAAGCATGCAGGATGT+GGG | + | chr6.3:84550707-84550726 | MS.gene75125:CDS | 45.0% | |
| TGATTCCTCGAGGTTTGACA+AGG | + | chr6.3:84549915-84549934 | MS.gene75125:CDS | 45.0% | |
| TGTGAGAAGCAAACCGTTAG+AGG | + | chr6.3:84550844-84550863 | MS.gene75125:CDS | 45.0% | |
| TGTTACAAGCATGCAGGATG+TGG | + | chr6.3:84550706-84550725 | MS.gene75125:CDS | 45.0% | |
| TTAGCACCGTATCTTCTGGA+AGG | + | chr6.3:84552096-84552115 | MS.gene75125:CDS | 45.0% | |
| TTGTTACACCACACGGTATG+TGG | + | chr6.3:84551385-84551404 | MS.gene75125:intron | 45.0% | |
| ! | AGTGTTCTTTTGACGGCTGT+TGG | + | chr6.3:84549763-84549782 | MS.gene75125:CDS | 45.0% |
| ! | TAGTTTGTGTTACTCTCGGG+AGG | - | chr6.3:84551913-84551932 | None:intergenic | 45.0% |
| !! | AGATGGCTTTGGAGTGCATA+CGG | - | chr6.3:84551620-84551639 | None:intergenic | 45.0% |
| !! | CCTCCTGTTTCGGTTTTGTA+TGG | + | chr6.3:84549631-84549650 | MS.gene75125:CDS | 45.0% |
| !! | GACGCAGAGTGTTCTTTTGA+CGG | + | chr6.3:84549756-84549775 | MS.gene75125:CDS | 45.0% |
| !! | GGCTGTTGGTAGTATTAGAG+AGG | + | chr6.3:84549777-84549796 | MS.gene75125:CDS | 45.0% |
| !! | TTGGCTCTGCCTCACAAATT+TGG | - | chr6.3:84551575-84551594 | None:intergenic | 45.0% |
| AAAGCGGCTTCTGTTGCGTT+GGG | + | chr6.3:84549829-84549848 | MS.gene75125:CDS | 50.0% | |
| ACTACCGAGCCTTCAGAAAC+TGG | + | chr6.3:84550108-84550127 | MS.gene75125:CDS | 50.0% | |
| CACTCCTGCTTGTCATCCAT+AGG | - | chr6.3:84550746-84550765 | None:intergenic | 50.0% | |
| CCCCAGAACACATTCTGTAG+TGG | + | chr6.3:84550619-84550638 | MS.gene75125:CDS | 50.0% | |
| CTTAACCAGTGCAGCCAAAC+AGG | + | chr6.3:84552410-84552429 | MS.gene75125:intron | 50.0% | |
| GAGCAATGCAATTTGGTCCG+TGG | - | chr6.3:84552580-84552599 | None:intergenic | 50.0% | |
| GCAAGAGAGGAATGAGGAGA+TGG | - | chr6.3:84549269-84549288 | None:intergenic | 50.0% | |
| TAAAGCGGCTTCTGTTGCGT+TGG | + | chr6.3:84549828-84549847 | MS.gene75125:CDS | 50.0% | |
| TATCTGTGGAGGTGACTCTG+TGG | + | chr6.3:84550421-84550440 | MS.gene75125:CDS | 50.0% | |
| TCTATGTCTGGATTCGGAGG+TGG | - | chr6.3:84550465-84550484 | None:intergenic | 50.0% | |
| TGTAAAACCGCATCCCTCAC+TGG | - | chr6.3:84550051-84550070 | None:intergenic | 50.0% | |
| ! | GGATCCAGTTTCTGAAGGCT+CGG | - | chr6.3:84550115-84550134 | None:intergenic | 50.0% |
| ! | GGCTCGGTAGTATAATGACC+CGG | - | chr6.3:84550099-84550118 | None:intergenic | 50.0% |
| ! | GTTGAAATGAGCACCGTCCA+CGG | + | chr6.3:84552560-84552579 | MS.gene75125:CDS | 50.0% |
| ! | TCCTGGGAGAAGCGACATTT+TGG | - | chr6.3:84551594-84551613 | None:intergenic | 50.0% |
| !! | CATTTTCAAGGAGCCAACCG+AGG | + | chr6.3:84551707-84551726 | MS.gene75125:CDS | 50.0% |
| AACTTGCCTGCTGCAGCCAT+GGG | - | chr6.3:84552143-84552162 | None:intergenic | 55.0% | |
| AGCCAACCGAGGATTCATGC+TGG | + | chr6.3:84551718-84551737 | MS.gene75125:CDS | 55.0% | |
| CACGCGGAATCCTCCTGTTT+CGG | + | chr6.3:84549621-84549640 | MS.gene75125:CDS | 55.0% | |
| CATAATCCCATGGCTGCAGC+AGG | + | chr6.3:84552134-84552153 | MS.gene75125:CDS | 55.0% | |
| CTCCAGCATGAATCCTCGGT+TGG | - | chr6.3:84551723-84551742 | None:intergenic | 55.0% | |
| CTGCTGCAGCCATGGGATTA+TGG | - | chr6.3:84552136-84552155 | None:intergenic | 55.0% | |
| GACTGCCCCAAAAGTCAGAG+AGG | + | chr6.3:84551777-84551796 | MS.gene75125:CDS | 55.0% | |
| GGAGTGCATACGGAGATCCT+GGG | - | chr6.3:84551610-84551629 | None:intergenic | 55.0% | |
| GGGGGAACAGATCTTGTTCC+TGG | + | chr6.3:84552789-84552808 | MS.gene75125:intron | 55.0% | |
| GGTGAAACCAGTGAGGGATG+CGG | + | chr6.3:84550041-84550060 | MS.gene75125:intron | 55.0% | |
| TGGAGTGCATACGGAGATCC+TGG | - | chr6.3:84551611-84551630 | None:intergenic | 55.0% | |
| TGGGCCTATGGATGACAAGC+AGG | + | chr6.3:84550739-84550758 | MS.gene75125:CDS | 55.0% | |
| ! | CTGCACGCCTCTTTTCTGCA+TGG | - | chr6.3:84552670-84552689 | None:intergenic | 55.0% |
| ! | GCCAAAATGTCGCTTCTCCC+AGG | + | chr6.3:84551590-84551609 | MS.gene75125:CDS | 55.0% |
| ! | GCTTCAGCGTTTTGTCTCGC+TGG | + | chr6.3:84549586-84549605 | MS.gene75125:CDS | 55.0% |
| !! | AGCATTGGTTCTGGCAGCAG+AGG | - | chr6.3:84551878-84551897 | None:intergenic | 55.0% |
| CAGTGCAGCCAAACAGGCCT+GGG | + | chr6.3:84552416-84552435 | MS.gene75125:intron | 60.0% | |
| GAACTTGCCTGCTGCAGCCA+TGG | - | chr6.3:84552144-84552163 | None:intergenic | 60.0% | |
| CCAGGCCTGTTTGGCTGCAC+TGG | - | chr6.3:84552418-84552437 | None:intergenic | 65.0% | |
| CCAGTGCAGCCAAACAGGCC+TGG | + | chr6.3:84552415-84552434 | MS.gene75125:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 84549124 | 84552815 | 84549124 | ID=MS.gene75125 |
| chr6.3 | mRNA | 84549124 | 84552815 | 84549124 | ID=MS.gene75125.t1;Parent=MS.gene75125 |
| chr6.3 | exon | 84549124 | 84549936 | 84549124 | ID=MS.gene75125.t1.exon1;Parent=MS.gene75125.t1 |
| chr6.3 | CDS | 84549124 | 84549936 | 84549124 | ID=cds.MS.gene75125.t1;Parent=MS.gene75125.t1 |
| chr6.3 | exon | 84550042 | 84550144 | 84550042 | ID=MS.gene75125.t1.exon2;Parent=MS.gene75125.t1 |
| chr6.3 | CDS | 84550042 | 84550144 | 84550042 | ID=cds.MS.gene75125.t1;Parent=MS.gene75125.t1 |
| chr6.3 | exon | 84550417 | 84551060 | 84550417 | ID=MS.gene75125.t1.exon3;Parent=MS.gene75125.t1 |
| chr6.3 | CDS | 84550417 | 84551060 | 84550417 | ID=cds.MS.gene75125.t1;Parent=MS.gene75125.t1 |
| chr6.3 | exon | 84551445 | 84552155 | 84551445 | ID=MS.gene75125.t1.exon4;Parent=MS.gene75125.t1 |
| chr6.3 | CDS | 84551445 | 84552155 | 84551445 | ID=cds.MS.gene75125.t1;Parent=MS.gene75125.t1 |
| chr6.3 | exon | 84552557 | 84552722 | 84552557 | ID=MS.gene75125.t1.exon5;Parent=MS.gene75125.t1 |
| chr6.3 | CDS | 84552557 | 84552722 | 84552557 | ID=cds.MS.gene75125.t1;Parent=MS.gene75125.t1 |
| chr6.3 | exon | 84552799 | 84552815 | 84552799 | ID=MS.gene75125.t1.exon6;Parent=MS.gene75125.t1 |
| chr6.3 | CDS | 84552799 | 84552815 | 84552799 | ID=cds.MS.gene75125.t1;Parent=MS.gene75125.t1 |
| Gene Sequence |
| Protein sequence |
