AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76064

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76064.t1 MTR_5g082830 98.243 683 12 0 1 683 1 683 0.0 1392
MS.gene76064.t1 MTR_5g071070 48.615 722 312 14 1 682 1 703 0.0 644
MS.gene76064.t1 MTR_5g071070 49.531 640 269 13 78 682 1 621 0.0 582
MS.gene76064.t1 MTR_1g075890 44.444 693 289 17 1 643 1 647 6.85e-175 514
MS.gene76064.t1 MTR_7g092070 42.897 725 303 21 30 683 47 731 2.51e-168 500
MS.gene76064.t1 MTR_3g070880 62.250 400 86 7 16 414 1 336 1.82e-165 485
MS.gene76064.t1 MTR_3g070880 51.867 241 88 9 439 674 298 515 3.97e-54 194
MS.gene76064.t1 MTR_3g029590 40.496 726 317 22 28 678 43 728 3.27e-146 443
MS.gene76064.t1 MTR_3g464260 46.485 441 159 10 33 463 28 401 1.59e-116 360
MS.gene76064.t1 MTR_3g464260 31.050 219 105 9 477 683 345 529 1.66e-13 73.9
MS.gene76064.t1 MTR_3g464280 39.241 632 234 20 1 624 1 490 4.51e-110 342
MS.gene76064.t1 MTR_1g050438 37.452 526 254 13 30 509 15 511 1.10e-103 328
MS.gene76064.t1 MTR_0728s0020 37.452 526 254 13 30 509 31 527 1.74e-103 329
MS.gene76064.t1 MTR_3g435590 43.552 411 195 7 1 385 1 400 2.98e-103 323
MS.gene76064.t1 MTR_3g435680 46.048 291 119 6 133 398 44 321 1.17e-74 246
MS.gene76064.t1 MTR_3g464290 36.008 511 209 17 150 640 39 451 6.42e-71 238
MS.gene76064.t1 MTR_3g464270 36.066 427 191 15 216 638 8 356 9.58e-59 202
MS.gene76064.t1 MTR_8g102100 48.826 213 100 4 213 420 77 285 2.06e-54 191
MS.gene76064.t1 MTR_6g090380 68.519 108 34 0 212 319 98 205 2.05e-51 183
MS.gene76064.t1 MTR_3g103960 52.795 161 61 3 207 366 43 189 5.95e-49 173
MS.gene76064.t1 MTR_2g090605 64.865 111 37 1 217 325 77 187 8.30e-48 174
MS.gene76064.t1 MTR_4g078660 60.748 107 42 0 213 319 56 162 6.60e-46 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76064.t1 AT2G40140 51.076 697 226 21 1 683 1 596 0.0 600
MS.gene76064.t1 AT2G40140 51.076 697 226 21 1 683 1 596 0.0 600
MS.gene76064.t1 AT5G58620 49.629 673 245 16 28 683 12 607 0.0 589
MS.gene76064.t1 AT3G55980 50.217 691 225 17 1 683 1 580 0.0 581
MS.gene76064.t1 AT3G55980 60.671 417 146 6 1 413 68 470 2.47e-168 497
MS.gene76064.t1 AT3G55980 46.277 188 65 7 498 683 494 647 4.98e-28 120
MS.gene76064.t1 AT2G41900 40.252 713 320 19 30 683 48 713 3.90e-143 435
MS.gene76064.t1 AT5G12850 40.608 724 306 25 25 678 37 706 9.21e-143 433
MS.gene76064.t1 AT5G07500 62.698 126 47 0 194 319 29 154 3.25e-55 189
MS.gene76064.t1 AT4G29190 46.256 227 110 4 195 420 58 273 1.36e-54 191
MS.gene76064.t1 AT2G25900 68.224 107 34 0 213 319 86 192 3.46e-51 180
MS.gene76064.t1 AT2G25900 68.224 107 34 0 213 319 86 192 3.46e-51 180
MS.gene76064.t1 AT2G19810 63.559 118 43 0 202 319 63 180 1.05e-50 181
MS.gene76064.t1 AT1G03790 55.263 152 54 3 213 360 78 219 8.60e-49 176
MS.gene76064.t1 AT5G44260 62.963 108 39 1 213 319 56 163 3.45e-44 163

Find 207 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCGAAGGTGGTTCATGTTT+TGG 0.196801 5.2:-70784555 None:intergenic
CTGAGGAAATCCGCTTCTTT+TGG 0.197101 5.2:+70784859 MS.gene76064:CDS
CTGCCACATGTTTCCACTCT+TGG 0.215837 5.2:-70784167 None:intergenic
ACTCGCAAGAATCCCCTTTC+TGG 0.236566 5.2:-70783859 None:intergenic
CTTATGATTGCTTCCTTGTT+TGG 0.250098 5.2:+70783275 MS.gene76064:CDS
GACATAAACAACGGTGTATA+TGG 0.256569 5.2:+70783665 MS.gene76064:CDS
CGATTTGGACAACGAATTAA+AGG 0.268967 5.2:-70783507 None:intergenic
TGTAGTTGAGATAGTAAATT+AGG 0.275386 5.2:-70784448 None:intergenic
ATCTGTTGTGTGGGTGTTGA+TGG 0.295601 5.2:-70784487 None:intergenic
GTCGTCCGGCCTTTCAGATT+GGG 0.298046 5.2:+70784783 MS.gene76064:CDS
TACACAGGGCGCAGCTCTTC+GGG 0.300339 5.2:-70783989 None:intergenic
TGTCGTCCGGCCTTTCAGAT+TGG 0.305721 5.2:+70784782 MS.gene76064:CDS
TCAGATTGGGGTTCCCCTAC+TGG 0.306620 5.2:+70784796 MS.gene76064:CDS
GCTCTTCATTGTGCTGTTGC+TGG 0.308167 5.2:+70783377 MS.gene76064:CDS
CAACACCTTCCTACGCGATT+TGG 0.321673 5.2:-70783522 None:intergenic
CGGAGTTTGTGGTTCCGATA+TGG 0.322011 5.2:+70783349 MS.gene76064:CDS
CACGACCCCTTGCGAAACTC+TGG 0.328143 5.2:-70783836 None:intergenic
TTGGGTTAATTCATTGGTTA+AGG 0.328824 5.2:+70784942 MS.gene76064:CDS
TGCCACATGTTTCCACTCTT+GGG 0.340074 5.2:-70784166 None:intergenic
CAGCTGCAGTGATGAATTCT+AGG 0.343853 5.2:+70784659 MS.gene76064:CDS
AGAAGTAGATGAGAAGGGTT+TGG 0.348805 5.2:+70783178 MS.gene76064:CDS
TGTCTCTTGGGTTAATTCAT+TGG 0.351526 5.2:+70784936 MS.gene76064:CDS
TCTGAGAATTCCGGTGTATA+TGG 0.353483 5.2:+70784973 MS.gene76064:CDS
TTTGGCCCATGTTCATGTTT+TGG 0.358068 5.2:-70784537 None:intergenic
CGCCTTCCAACCCTTCCTGC+AGG 0.359580 5.2:+70784758 MS.gene76064:CDS
CCCTACTGGGAAACTCGATT+GGG 0.360876 5.2:+70784810 MS.gene76064:CDS
ATACACAGGGCGCAGCTCTT+CGG 0.370872 5.2:-70783990 None:intergenic
TATATGGATCAGATGAGTTT+AGG 0.370932 5.2:+70783681 MS.gene76064:CDS
ATTTGAATGAAGAAGGCTTT+TGG 0.383843 5.2:+70783201 MS.gene76064:CDS
GACATCAGGCTCAGCATGTT+GGG 0.385432 5.2:-70784917 None:intergenic
CTCCTCCTTGCATTCTCACC+TGG 0.394967 5.2:-70783776 None:intergenic
ATGCTGAGCCTGATGTCTCT+TGG 0.404935 5.2:+70784923 MS.gene76064:CDS
TTCTGTTGAATTCGCTGTTA+CGG 0.410177 5.2:-70784375 None:intergenic
ATGGAGGATAAGCTTCAAAA+AGG 0.412138 5.2:+70783092 MS.gene76064:CDS
GTCAATTCCACTAGCTGAAT+AGG 0.414997 5.2:-70784047 None:intergenic
GAGGAAGGCATATTGTTTGA+TGG 0.415999 5.2:-70784586 None:intergenic
GTCAAGCTCTTGCTTGATGC+CGG 0.418825 5.2:+70783425 MS.gene76064:CDS
TATGGTGAGGGCTTCCTCAC+TGG 0.419808 5.2:-70784610 None:intergenic
CCCCTACTGGGAAACTCGAT+TGG 0.419821 5.2:+70784809 MS.gene76064:CDS
CGCAAGGGGTCGTGCCAGAA+AGG 0.421946 5.2:+70783845 MS.gene76064:CDS
CGTCCTTGCAAAGCCTTGTT+CGG 0.424614 5.2:-70783925 None:intergenic
CAGCTGTAAGGGTATTTCCT+TGG 0.426047 5.2:-70783803 None:intergenic
ATTGATGTCAACGGAGTTTG+TGG 0.428144 5.2:+70783338 MS.gene76064:CDS
TCGGGCAACGATATATCAAT+AGG 0.428410 5.2:-70783644 None:intergenic
GTCGAGTATATTCTTTCGAC+AGG 0.429694 5.2:+70783311 MS.gene76064:CDS
CTGCAGCTGCCGCATATTCT+CGG 0.430426 5.2:-70784998 None:intergenic
AAGAGGTCATCAAGGTTAGT+TGG 0.431942 5.2:-70784412 None:intergenic
GTGAGGAAGCCCTCACCATA+TGG 0.432783 5.2:+70784613 MS.gene76064:CDS
GCACTCTTCAAACGGCTACC+TGG 0.432870 5.2:-70784226 None:intergenic
CGCCCTGTGTATGCCTCCAC+TGG 0.433195 5.2:+70784001 MS.gene76064:CDS
AGCTGTAAGGGTATTTCCTT+GGG 0.442755 5.2:-70783802 None:intergenic
CCACTAGCTGAATAGGACTT+TGG 0.443786 5.2:-70784040 None:intergenic
CCCCTTGCGAAACTCTGGGC+AGG 0.444998 5.2:-70783831 None:intergenic
GATGTTCCATCTGAGAATTC+CGG 0.446112 5.2:+70784964 MS.gene76064:CDS
AATTCGCTGTTACGGAAAGA+TGG 0.453909 5.2:-70784367 None:intergenic
TGGGATGCAGTTGGTGCAGC+TGG 0.454002 5.2:-70784898 None:intergenic
GGGCAGGGAACACAGCTGTA+AGG 0.457289 5.2:-70783815 None:intergenic
GTTTAGGATGTACAGTTTCA+AGG 0.458638 5.2:+70783697 MS.gene76064:CDS
TGCTGAGCCTGATGTCTCTT+GGG 0.461989 5.2:+70784924 MS.gene76064:CDS
TATACACCGTTGTTTATGTC+GGG 0.462321 5.2:-70783662 None:intergenic
GGTTTGGATTTGAATGAAGA+AGG 0.464213 5.2:+70783194 MS.gene76064:CDS
CACTCAAAGCACTCTTCAAA+CGG 0.468740 5.2:-70784234 None:intergenic
TGAGATGGAATTGCTCGGTC+TGG 0.469920 5.2:+70784273 MS.gene76064:CDS
CAGATTGGGGTTCCCCTACT+GGG 0.471882 5.2:+70784797 MS.gene76064:CDS
GGCTTCCTCACTGGAGAGGA+AGG 0.472160 5.2:-70784601 None:intergenic
CTACCTGGGAGCTGCAACGA+TGG 0.472506 5.2:-70784211 None:intergenic
CAAGAGAGAAGTAGATGAGA+AGG 0.474046 5.2:+70783172 MS.gene76064:CDS
TGGCGCATCTGCATTGCACT+TGG 0.475619 5.2:-70784517 None:intergenic
TTCTCACCTGGATGAACAAA+GGG 0.476487 5.2:-70783764 None:intergenic
AAGAGAGAAGTAGATGAGAA+GGG 0.478152 5.2:+70783173 MS.gene76064:CDS
AACAAGGAAGCAATCATAAG+AGG 0.482396 5.2:-70783272 None:intergenic
GCTGGCGCAATCAGATCAAC+CGG 0.486158 5.2:-70783485 None:intergenic
CACTCTTCAAACGGCTACCT+GGG 0.486258 5.2:-70784225 None:intergenic
CACCACGGTCAATGAAACTT+TGG 0.491260 5.2:-70784708 None:intergenic
GCAAGGGGTCGTGCCAGAAA+GGG 0.492458 5.2:+70783846 MS.gene76064:CDS
CCCAATCGAGTTTCCCAGTA+GGG 0.494194 5.2:-70784810 None:intergenic
GGTGCTGCAACTCACCATCT+TGG 0.497686 5.2:+70784727 MS.gene76064:CDS
CCTTCCTGCAGGGTGTCGTC+CGG 0.501860 5.2:+70784769 MS.gene76064:CDS
AACACCACCCATGTCTCCCT+TGG 0.506352 5.2:+70784129 MS.gene76064:CDS
AAACTCGATTGGGGTGTAAA+CGG 0.506355 5.2:+70784820 MS.gene76064:CDS
ATGAAGAGCAGTGGCCATAT+CGG 0.506470 5.2:-70783363 None:intergenic
TGTGGGTGTTGATGGTTGCA+TGG 0.506859 5.2:-70784479 None:intergenic
AGGCTTTGCAAGGACGAGAC+TGG 0.506964 5.2:+70783932 MS.gene76064:CDS
CACTCTAGTGCTTCCAAACA+AGG 0.508719 5.2:-70783288 None:intergenic
TGAAGAGTGCTTTGAGTGCA+AGG 0.510749 5.2:+70784239 MS.gene76064:CDS
TTGGCTGCGCTGCTTTGCAA+AGG 0.511458 5.2:-70784689 None:intergenic
CTTCATTGTGCTGTTGCTGG+TGG 0.512690 5.2:+70783380 MS.gene76064:CDS
TCGTCCGGCCTTTCAGATTG+GGG 0.513214 5.2:+70784784 MS.gene76064:CDS
AGCCTTGTTCGGTATTGTGC+GGG 0.515045 5.2:-70783914 None:intergenic
GCCTTCCAACCCTTCCTGCA+GGG 0.517193 5.2:+70784759 MS.gene76064:CDS
CCACCCATGTCTCCCTTGGC+AGG 0.517296 5.2:+70784133 MS.gene76064:CDS
AGACATCAGGCTCAGCATGT+TGG 0.517932 5.2:-70784918 None:intergenic
TTGTACATCTGCTCCACCCA+TGG 0.518688 5.2:-70785051 None:intergenic
TGATGCTAGTGGAAACAAAC+CGG 0.520501 5.2:+70783466 MS.gene76064:CDS
AATTTACTATCTCAACTACA+TGG 0.520900 5.2:+70784451 MS.gene76064:CDS
CCCTGCCCAGAGTTTCGCAA+GGG 0.522429 5.2:+70783830 MS.gene76064:CDS
TCGAGACGTGCTTCCACCAT+GGG 0.522786 5.2:+70785035 MS.gene76064:CDS
TTCATCCAGGTGAGAATGCA+AGG 0.523324 5.2:+70783771 MS.gene76064:CDS
ATTCGCTGTTACGGAAAGAT+GGG 0.523731 5.2:-70784366 None:intergenic
TCCCTGCCCAGAGTTTCGCA+AGG 0.526817 5.2:+70783829 MS.gene76064:CDS
AAGAATTGGATCGAAGAAGA+TGG 0.527469 5.2:+70783232 MS.gene76064:CDS
CGACACCCTGCAGGAAGGGT+TGG 0.530365 5.2:-70784764 None:intergenic
GTACAAAGAGCAGGAGCAGA+TGG 0.534247 5.2:+70785068 MS.gene76064:CDS
CCACCATCGTTGCAGCTCCC+AGG 0.534409 5.2:+70784208 MS.gene76064:CDS
GAATTAACCCAAGAGACATC+AGG 0.537150 5.2:-70784931 None:intergenic
GGAGCAGATGTACAAAGAGC+AGG 0.537466 5.2:+70785059 MS.gene76064:CDS
ACGACCCCTTGCGAAACTCT+GGG 0.538237 5.2:-70783835 None:intergenic
CGGACGACACCCTGCAGGAA+GGG 0.538863 5.2:-70784768 None:intergenic
CCAAAGTCCTATTCAGCTAG+TGG 0.541639 5.2:+70784040 MS.gene76064:CDS
TCAAGGTGAAGCCATGCTCA+AGG 0.542484 5.2:+70783714 MS.gene76064:CDS
GAGTGTCCCTTTGTTCATCC+AGG 0.543113 5.2:+70783758 MS.gene76064:CDS
ATTTCTGAACCCAAAAGAAG+CGG 0.548536 5.2:-70784869 None:intergenic
GTTGTCCAAATCGCGTAGGA+AGG 0.549554 5.2:+70783517 MS.gene76064:CDS
GGGAGATGATGAACCTGCCA+AGG 0.553827 5.2:-70784146 None:intergenic
AGAAGATGGAATCTGAAAAG+AGG 0.553960 5.2:+70783246 MS.gene76064:CDS
ACCCTGCAGGAAGGGTTGGA+AGG 0.554901 5.2:-70784760 None:intergenic
TGGAGAATGCATCTGTTGTG+TGG 0.555021 5.2:-70784497 None:intergenic
TTGGACAACGAATTAAAGGC+TGG 0.557548 5.2:-70783503 None:intergenic
GGCAGGGAACACAGCTGTAA+GGG 0.559340 5.2:-70783814 None:intergenic
ATATACACCGTTGTTTATGT+CGG 0.561652 5.2:-70783663 None:intergenic
GCTGATGAATCAAATCCATA+TGG 0.562833 5.2:-70784628 None:intergenic
AAGCCTTGTTCGGTATTGTG+CGG 0.563056 5.2:-70783915 None:intergenic
TTCTTCATCAGACTGTGCCA+TGG 0.563892 5.2:+70783073 MS.gene76064:CDS
GAACCAGTGGAGGCATACAC+AGG 0.565086 5.2:-70784004 None:intergenic
CATCACTGCAGCTGCTACTG+CGG 0.565349 5.2:-70784650 None:intergenic
GGAACCCCAATCTGAAAGGC+CGG 0.568449 5.2:-70784788 None:intergenic
AAGGCCGGACGACACCCTGC+AGG 0.568796 5.2:-70784773 None:intergenic
GATCTTGAGATGGAATTGCT+CGG 0.572830 5.2:+70784268 MS.gene76064:CDS
CCTGGGAGCTGCAACGATGG+TGG 0.572925 5.2:-70784208 None:intergenic
GATGCGCCAAAACATGAACA+TGG 0.573046 5.2:+70784531 MS.gene76064:CDS
AGACGTGCTTCCACCATGGG+TGG 0.573955 5.2:+70785038 MS.gene76064:CDS
CTTGTTTGGAAGCACTAGAG+TGG 0.576155 5.2:+70783289 MS.gene76064:CDS
CCCTTGCGAAACTCTGGGCA+GGG 0.576535 5.2:-70783830 None:intergenic
TGAACCTGCCAAGGGAGACA+TGG 0.576779 5.2:-70784137 None:intergenic
AGACAATTCAAGCAAGATTG+AGG 0.577524 5.2:-70783126 None:intergenic
ATCCCGCACAATACCGAACA+AGG 0.579739 5.2:+70783912 MS.gene76064:CDS
AAGACAATCAGCATCTGCAC+CGG 0.580324 5.2:-70783444 None:intergenic
CAAGGGCTTACTCTCACGAT+TGG 0.580426 5.2:+70783732 MS.gene76064:CDS
GTCGAGACGTGCTTCCACCA+TGG 0.580527 5.2:+70785034 MS.gene76064:CDS
ATGGATAACTTGCGCGAAGG+TGG 0.584205 5.2:-70784567 None:intergenic
AAGGAGCGTCCATCTCCCCT+TGG 0.584326 5.2:-70783583 None:intergenic
TGAACTCATCCAAGGGGAGA+TGG 0.584869 5.2:+70783574 MS.gene76064:CDS
CAAATCGCGTAGGAAGGTGT+TGG 0.585250 5.2:+70783523 MS.gene76064:CDS
GCTGATTGTCTTGATGCTAG+TGG 0.585414 5.2:+70783455 MS.gene76064:CDS
CCGGACGACACCCTGCAGGA+AGG 0.586791 5.2:-70784769 None:intergenic
GGAGAATGCATCTGTTGTGT+GGG 0.590736 5.2:-70784496 None:intergenic
GAAGAGTGCTTTGAGTGCAA+GGG 0.591839 5.2:+70784240 MS.gene76064:CDS
CAAGGTGAAGCCATGCTCAA+GGG 0.594043 5.2:+70783715 MS.gene76064:CDS
ATTTACTATCTCAACTACAT+GGG 0.597158 5.2:+70784452 MS.gene76064:CDS
CAAGGGGTCGTGCCAGAAAG+GGG 0.599774 5.2:+70783847 MS.gene76064:CDS
ATACCGAACAAGGCTTTGCA+AGG 0.600596 5.2:+70783922 MS.gene76064:CDS
TAGGATCAGCTGATGCTAAG+AGG 0.602013 5.2:-70784429 None:intergenic
TGCTGCTGCTGTTGACGACG+AGG 0.602651 5.2:-70784301 None:intergenic
TAGGGGAACCCCAATCTGAA+AGG 0.605691 5.2:-70784792 None:intergenic
GAATCAAATCCATATGGTGA+GGG 0.607337 5.2:-70784622 None:intergenic
AGGATTTGGATTATGTGCAG+TGG 0.608930 5.2:+70783035 None:intergenic
GTAAGTGCTGAACTCATCCA+AGG 0.609847 5.2:+70783566 MS.gene76064:CDS
TGAGAGTAAGCCCTTGAGCA+TGG 0.609898 5.2:-70783725 None:intergenic
CCTGCCCAGAGTTTCGCAAG+GGG 0.612209 5.2:+70783831 MS.gene76064:CDS
ATTCTCACCTGGATGAACAA+AGG 0.616516 5.2:-70783765 None:intergenic
TGGATGAACAAAGGGACACT+CGG 0.617153 5.2:-70783756 None:intergenic
GGTTCATCATCTCCCAAGAG+TGG 0.617657 5.2:+70784154 MS.gene76064:CDS
CTGCAGGAAGGGTTGGAAGG+CGG 0.621056 5.2:-70784757 None:intergenic
ATTCGTTGTCCAAATCGCGT+AGG 0.621353 5.2:+70783513 MS.gene76064:CDS
TCAGCATGTTGGGATGCAGT+TGG 0.624317 5.2:-70784907 None:intergenic
CTGATGCTAAGAGGTCATCA+AGG 0.625709 5.2:-70784420 None:intergenic
TGAATCAAATCCATATGGTG+AGG 0.627563 5.2:-70784623 None:intergenic
AGTTGACATCGGCAAAGATG+AGG 0.628879 5.2:-70784101 None:intergenic
GCTGAATAGGACTTTGGTGA+AGG 0.628923 5.2:-70784034 None:intergenic
TATACACCGGAATTCTCAGA+TGG 0.629638 5.2:-70784970 None:intergenic
AGGCATAGCTGAACCAGTGG+AGG 0.631941 5.2:-70784014 None:intergenic
TACATCTGCTCCACCCATGG+TGG 0.632978 5.2:-70785048 None:intergenic
ATGCAAGGAGGAGAGACCCA+AGG 0.635278 5.2:+70783786 MS.gene76064:CDS
GGAGATGATGAACCTGCCAA+GGG 0.637245 5.2:-70784145 None:intergenic
GAACCTGCCAAGGGAGACAT+GGG 0.638207 5.2:-70784136 None:intergenic
AGCCAAAGTTTCATTGACCG+TGG 0.638346 5.2:+70784706 MS.gene76064:CDS
TATATGGTGCCGAGAATATG+CGG 0.638645 5.2:+70784989 MS.gene76064:CDS
TGAGGGCTTCCTCACTGGAG+AGG 0.638650 5.2:-70784605 None:intergenic
TTCATCAGACTGTGCCATGG+AGG 0.642039 5.2:+70783076 MS.gene76064:CDS
AACAGCACAATGAAGAGCAG+TGG 0.643629 5.2:-70783372 None:intergenic
TAAGTGCTGAACTCATCCAA+GGG 0.645605 5.2:+70783567 MS.gene76064:CDS
AACCAGTGGAGGCATACACA+GGG 0.645864 5.2:-70784003 None:intergenic
CCTACTGGGAAACTCGATTG+GGG 0.647685 5.2:+70784811 MS.gene76064:CDS
GCTGCAACGATGGTGGAGTG+AGG 0.652628 5.2:-70784201 None:intergenic
ACAGGGAAGATTGATGTCAA+CGG 0.653698 5.2:+70783329 MS.gene76064:CDS
CCAATCGAGTTTCCCAGTAG+GGG 0.661467 5.2:-70784809 None:intergenic
ATGCGCCAAAACATGAACAT+GGG 0.661793 5.2:+70784532 MS.gene76064:CDS
CTCCCAAGAGTGGAAACATG+TGG 0.663242 5.2:+70784164 MS.gene76064:CDS
AAGGGATCTCGATCTTGAGA+TGG 0.663328 5.2:+70784258 MS.gene76064:CDS
TGAAGGCATAGCTGAACCAG+TGG 0.664738 5.2:-70784017 None:intergenic
GCTGTTACGGAAAGATGGGG+AGG 0.665128 5.2:-70784362 None:intergenic
AAGGCGGAGAAAGTCCAAGA+TGG 0.665195 5.2:-70784741 None:intergenic
GATTCTTGCGAGTATGCACA+TGG 0.665419 5.2:+70783869 MS.gene76064:CDS
TTCGCTGTTACGGAAAGATG+GGG 0.672071 5.2:-70784365 None:intergenic
GGTGTTGAAACAGTTGACAT+CGG 0.677946 5.2:-70784112 None:intergenic
GTGACGAGCTGAACAAGCTG+AGG 0.679618 5.2:+70784842 MS.gene76064:CDS
CCCCAATCGAGTTTCCCAGT+AGG 0.679624 5.2:-70784811 None:intergenic
GATGAGGAGCTAAGAGACAA+CGG 0.680167 5.2:-70784085 None:intergenic
GATGGTGAGTTGCAGCACCA+CGG 0.682458 5.2:-70784723 None:intergenic
ATTCTCGGCACCATATACAC+CGG 0.692075 5.2:-70784983 None:intergenic
TCGAGTATATTCTTTCGACA+GGG 0.693087 5.2:+70783312 MS.gene76064:CDS
TTGATGGATAACTTGCGCGA+AGG 0.700054 5.2:-70784570 None:intergenic
AAGTGCTGAACTCATCCAAG+GGG 0.716976 5.2:+70783568 MS.gene76064:CDS
ATATGCCTTCCTCTCCAGTG+AGG 0.717918 5.2:+70784596 MS.gene76064:CDS
TCGTTGCCCGACATAAACAA+CGG 0.735153 5.2:+70783656 MS.gene76064:CDS
CCTGCCAAGGGAGACATGGG+TGG 0.744203 5.2:-70784133 None:intergenic
ATCCAGGTGAGAATGCAAGG+AGG 0.764804 5.2:+70783774 MS.gene76064:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATTTACTATCTCAACTACA+TGG + chr5.2:70784451-70784470 MS.gene76064:CDS 25.0%
! ATTTACTATCTCAACTACAT+GGG + chr5.2:70784452-70784471 MS.gene76064:CDS 25.0%
! TGTAGTTGAGATAGTAAATT+AGG - chr5.2:70784451-70784470 None:intergenic 25.0%
ATATACACCGTTGTTTATGT+CGG - chr5.2:70783666-70783685 None:intergenic 30.0%
CCTTTCTCATTGAAAAAAGA+AGG + chr5.2:70783602-70783621 MS.gene76064:CDS 30.0%
TATATGGATCAGATGAGTTT+AGG + chr5.2:70783681-70783700 MS.gene76064:CDS 30.0%
TTCTCATTGAAAAAAGAAGG+TGG + chr5.2:70783605-70783624 MS.gene76064:CDS 30.0%
! ATTTGAATGAAGAAGGCTTT+TGG + chr5.2:70783201-70783220 MS.gene76064:CDS 30.0%
! TTGGGTTAATTCATTGGTTA+AGG + chr5.2:70784942-70784961 MS.gene76064:CDS 30.0%
! TTTTGGTATGGTAGAAGAAT+TGG + chr5.2:70783218-70783237 MS.gene76064:CDS 30.0%
!!! CCTTCTTTTTTCAATGAGAA+AGG - chr5.2:70783605-70783624 None:intergenic 30.0%
!!! TCTTTTGGGTTCAGAAATAA+TGG + chr5.2:70784874-70784893 MS.gene76064:CDS 30.0%
AACAAGGAAGCAATCATAAG+AGG - chr5.2:70783275-70783294 None:intergenic 35.0%
AAGAATTGGATCGAAGAAGA+TGG + chr5.2:70783232-70783251 MS.gene76064:CDS 35.0%
AAGAGAGAAGTAGATGAGAA+GGG + chr5.2:70783173-70783192 MS.gene76064:CDS 35.0%
AGAAGATGGAATCTGAAAAG+AGG + chr5.2:70783246-70783265 MS.gene76064:CDS 35.0%
AGACAATTCAAGCAAGATTG+AGG - chr5.2:70783129-70783148 None:intergenic 35.0%
ATGGAGGATAAGCTTCAAAA+AGG + chr5.2:70783092-70783111 MS.gene76064:CDS 35.0%
ATTTCTGAACCCAAAAGAAG+CGG - chr5.2:70784872-70784891 None:intergenic 35.0%
CTTATGATTGCTTCCTTGTT+TGG + chr5.2:70783275-70783294 MS.gene76064:CDS 35.0%
GAATCAAATCCATATGGTGA+GGG - chr5.2:70784625-70784644 None:intergenic 35.0%
GACATAAACAACGGTGTATA+TGG + chr5.2:70783665-70783684 MS.gene76064:CDS 35.0%
GCTGATGAATCAAATCCATA+TGG - chr5.2:70784631-70784650 None:intergenic 35.0%
GGTTTGGATTTGAATGAAGA+AGG + chr5.2:70783194-70783213 MS.gene76064:CDS 35.0%
TATACACCGTTGTTTATGTC+GGG - chr5.2:70783665-70783684 None:intergenic 35.0%
TCGAGTATATTCTTTCGACA+GGG + chr5.2:70783312-70783331 MS.gene76064:CDS 35.0%
TGAATCAAATCCATATGGTG+AGG - chr5.2:70784626-70784645 None:intergenic 35.0%
TGTCTCTTGGGTTAATTCAT+TGG + chr5.2:70784936-70784955 MS.gene76064:CDS 35.0%
TTCTGTTGAATTCGCTGTTA+CGG - chr5.2:70784378-70784397 None:intergenic 35.0%
! AATGAAGAAGGCTTTTGGTA+TGG + chr5.2:70783206-70783225 MS.gene76064:CDS 35.0%
! CGATTTGGACAACGAATTAA+AGG - chr5.2:70783510-70783529 None:intergenic 35.0%
! GTTTAGGATGTACAGTTTCA+AGG + chr5.2:70783697-70783716 MS.gene76064:CDS 35.0%
!!! TTTTTGAAGCTTATCCTCCA+TGG - chr5.2:70783093-70783112 None:intergenic 35.0%
AAACTCGATTGGGGTGTAAA+CGG + chr5.2:70784820-70784839 MS.gene76064:CDS 40.0%
AAGAGGTCATCAAGGTTAGT+TGG - chr5.2:70784415-70784434 None:intergenic 40.0%
AATTCGCTGTTACGGAAAGA+TGG - chr5.2:70784370-70784389 None:intergenic 40.0%
ACAGGGAAGATTGATGTCAA+CGG + chr5.2:70783329-70783348 MS.gene76064:CDS 40.0%
AGAAGTAGATGAGAAGGGTT+TGG + chr5.2:70783178-70783197 MS.gene76064:CDS 40.0%
ATGCGCCAAAACATGAACAT+GGG + chr5.2:70784532-70784551 MS.gene76064:CDS 40.0%
ATTCGCTGTTACGGAAAGAT+GGG - chr5.2:70784369-70784388 None:intergenic 40.0%
ATTCTCACCTGGATGAACAA+AGG - chr5.2:70783768-70783787 None:intergenic 40.0%
ATTGATGTCAACGGAGTTTG+TGG + chr5.2:70783338-70783357 MS.gene76064:CDS 40.0%
CAAGAGAGAAGTAGATGAGA+AGG + chr5.2:70783172-70783191 MS.gene76064:CDS 40.0%
GAATTAACCCAAGAGACATC+AGG - chr5.2:70784934-70784953 None:intergenic 40.0%
GATCTTGAGATGGAATTGCT+CGG + chr5.2:70784268-70784287 MS.gene76064:CDS 40.0%
GATGTTCCATCTGAGAATTC+CGG + chr5.2:70784964-70784983 MS.gene76064:CDS 40.0%
GTCAATTCCACTAGCTGAAT+AGG - chr5.2:70784050-70784069 None:intergenic 40.0%
GTCGAGTATATTCTTTCGAC+AGG + chr5.2:70783311-70783330 MS.gene76064:CDS 40.0%
TATACACCGGAATTCTCAGA+TGG - chr5.2:70784973-70784992 None:intergenic 40.0%
TCGGGCAACGATATATCAAT+AGG - chr5.2:70783647-70783666 None:intergenic 40.0%
TCTGAGAATTCCGGTGTATA+TGG + chr5.2:70784973-70784992 MS.gene76064:CDS 40.0%
TGATGCTAGTGGAAACAAAC+CGG + chr5.2:70783466-70783485 MS.gene76064:CDS 40.0%
TTCTCACCTGGATGAACAAA+GGG - chr5.2:70783767-70783786 None:intergenic 40.0%
TTGGACAACGAATTAAAGGC+TGG - chr5.2:70783506-70783525 None:intergenic 40.0%
! CACTCAAAGCACTCTTCAAA+CGG - chr5.2:70784237-70784256 None:intergenic 40.0%
! GAGGAAGGCATATTGTTTGA+TGG - chr5.2:70784589-70784608 None:intergenic 40.0%
! GGTGTTGAAACAGTTGACAT+CGG - chr5.2:70784115-70784134 None:intergenic 40.0%
! TATATGGTGCCGAGAATATG+CGG + chr5.2:70784989-70785008 MS.gene76064:CDS 40.0%
! TGAGGAAATCCGCTTCTTTT+GGG + chr5.2:70784860-70784879 MS.gene76064:CDS 40.0%
! TTTGGCCCATGTTCATGTTT+TGG - chr5.2:70784540-70784559 None:intergenic 40.0%
!! AGCTGTAAGGGTATTTCCTT+GGG - chr5.2:70783805-70783824 None:intergenic 40.0%
!! GTGTTGGAGATGTTTTTGAG+AGG + chr5.2:70783539-70783558 MS.gene76064:CDS 40.0%
!! TAAGTGCTGAACTCATCCAA+GGG + chr5.2:70783567-70783586 MS.gene76064:CDS 40.0%
AACAGCACAATGAAGAGCAG+TGG - chr5.2:70783375-70783394 None:intergenic 45.0%
AAGACAATCAGCATCTGCAC+CGG - chr5.2:70783447-70783466 None:intergenic 45.0%
AAGGGATCTCGATCTTGAGA+TGG + chr5.2:70784258-70784277 MS.gene76064:CDS 45.0%
AGCCAAAGTTTCATTGACCG+TGG + chr5.2:70784706-70784725 MS.gene76064:CDS 45.0%
AGTTGACATCGGCAAAGATG+AGG - chr5.2:70784104-70784123 None:intergenic 45.0%
ATACCGAACAAGGCTTTGCA+AGG + chr5.2:70783922-70783941 MS.gene76064:CDS 45.0%
ATGAAGAGCAGTGGCCATAT+CGG - chr5.2:70783366-70783385 None:intergenic 45.0%
ATTCGTTGTCCAAATCGCGT+AGG + chr5.2:70783513-70783532 MS.gene76064:CDS 45.0%
ATTCTCGGCACCATATACAC+CGG - chr5.2:70784986-70785005 None:intergenic 45.0%
CACCACGGTCAATGAAACTT+TGG - chr5.2:70784711-70784730 None:intergenic 45.0%
CACTCTAGTGCTTCCAAACA+AGG - chr5.2:70783291-70783310 None:intergenic 45.0%
CAGCTGCAGTGATGAATTCT+AGG + chr5.2:70784659-70784678 MS.gene76064:CDS 45.0%
CCAAAGTCCTATTCAGCTAG+TGG + chr5.2:70784040-70784059 MS.gene76064:CDS 45.0%
CCACTAGCTGAATAGGACTT+TGG - chr5.2:70784043-70784062 None:intergenic 45.0%
CTGATGCTAAGAGGTCATCA+AGG - chr5.2:70784423-70784442 None:intergenic 45.0%
GATGAGGAGCTAAGAGACAA+CGG - chr5.2:70784088-70784107 None:intergenic 45.0%
GATGCGCCAAAACATGAACA+TGG + chr5.2:70784531-70784550 MS.gene76064:CDS 45.0%
GATTCTTGCGAGTATGCACA+TGG + chr5.2:70783869-70783888 MS.gene76064:CDS 45.0%
GCTGAATAGGACTTTGGTGA+AGG - chr5.2:70784037-70784056 None:intergenic 45.0%
GCTGATTGTCTTGATGCTAG+TGG + chr5.2:70783455-70783474 MS.gene76064:CDS 45.0%
GGAGAATGCATCTGTTGTGT+GGG - chr5.2:70784499-70784518 None:intergenic 45.0%
TAGGATCAGCTGATGCTAAG+AGG - chr5.2:70784432-70784451 None:intergenic 45.0%
TCGTTGCCCGACATAAACAA+CGG + chr5.2:70783656-70783675 MS.gene76064:CDS 45.0%
TGCCACATGTTTCCACTCTT+GGG - chr5.2:70784169-70784188 None:intergenic 45.0%
TGGAGAATGCATCTGTTGTG+TGG - chr5.2:70784500-70784519 None:intergenic 45.0%
TGGATGAACAAAGGGACACT+CGG - chr5.2:70783759-70783778 None:intergenic 45.0%
TTCATCCAGGTGAGAATGCA+AGG + chr5.2:70783771-70783790 MS.gene76064:CDS 45.0%
TTCGCTGTTACGGAAAGATG+GGG - chr5.2:70784368-70784387 None:intergenic 45.0%
TTCTTCATCAGACTGTGCCA+TGG + chr5.2:70783073-70783092 MS.gene76064:CDS 45.0%
! CTGAGGAAATCCGCTTCTTT+TGG + chr5.2:70784859-70784878 MS.gene76064:CDS 45.0%
! TTGATGGATAACTTGCGCGA+AGG - chr5.2:70784573-70784592 None:intergenic 45.0%
!! AAGCCTTGTTCGGTATTGTG+CGG - chr5.2:70783918-70783937 None:intergenic 45.0%
!! AAGTGCTGAACTCATCCAAG+GGG + chr5.2:70783568-70783587 MS.gene76064:CDS 45.0%
!! ATCTGTTGTGTGGGTGTTGA+TGG - chr5.2:70784490-70784509 None:intergenic 45.0%
!! CAGCTGTAAGGGTATTTCCT+TGG - chr5.2:70783806-70783825 None:intergenic 45.0%
!! CTTGTTTGGAAGCACTAGAG+TGG + chr5.2:70783289-70783308 MS.gene76064:CDS 45.0%
!! GAAGAGTGCTTTGAGTGCAA+GGG + chr5.2:70784240-70784259 MS.gene76064:CDS 45.0%
!! GGAGATGTTTTTGAGAGGTG+AGG + chr5.2:70783544-70783563 MS.gene76064:CDS 45.0%
!! GTAAGTGCTGAACTCATCCA+AGG + chr5.2:70783566-70783585 MS.gene76064:CDS 45.0%
!! TGAAGAGTGCTTTGAGTGCA+AGG + chr5.2:70784239-70784258 MS.gene76064:CDS 45.0%
!!! CACATGGTGTTTTCGAGTCA+TGG + chr5.2:70783885-70783904 MS.gene76064:CDS 45.0%
AAGGCGGAGAAAGTCCAAGA+TGG - chr5.2:70784744-70784763 None:intergenic 50.0%
ACTCGCAAGAATCCCCTTTC+TGG - chr5.2:70783862-70783881 None:intergenic 50.0%
AGACATCAGGCTCAGCATGT+TGG - chr5.2:70784921-70784940 None:intergenic 50.0%
ATATGCCTTCCTCTCCAGTG+AGG + chr5.2:70784596-70784615 MS.gene76064:CDS 50.0%
ATCCAGGTGAGAATGCAAGG+AGG + chr5.2:70783774-70783793 MS.gene76064:CDS 50.0%
ATCCCGCACAATACCGAACA+AGG + chr5.2:70783912-70783931 MS.gene76064:CDS 50.0%
ATGCTGAGCCTGATGTCTCT+TGG + chr5.2:70784923-70784942 MS.gene76064:CDS 50.0%
CAACACCTTCCTACGCGATT+TGG - chr5.2:70783525-70783544 None:intergenic 50.0%
CAAGGGCTTACTCTCACGAT+TGG + chr5.2:70783732-70783751 MS.gene76064:CDS 50.0%
CAAGGTGAAGCCATGCTCAA+GGG + chr5.2:70783715-70783734 MS.gene76064:CDS 50.0%
CACTCTTCAAACGGCTACCT+GGG - chr5.2:70784228-70784247 None:intergenic 50.0%
CCAATCGAGTTTCCCAGTAG+GGG - chr5.2:70784812-70784831 None:intergenic 50.0%
CCCAATCGAGTTTCCCAGTA+GGG - chr5.2:70784813-70784832 None:intergenic 50.0%
CCCTACTGGGAAACTCGATT+GGG + chr5.2:70784810-70784829 MS.gene76064:CDS 50.0%
CCTACTGGGAAACTCGATTG+GGG + chr5.2:70784811-70784830 MS.gene76064:CDS 50.0%
CGGAGTTTGTGGTTCCGATA+TGG + chr5.2:70783349-70783368 MS.gene76064:CDS 50.0%
CTCCCAAGAGTGGAAACATG+TGG + chr5.2:70784164-70784183 MS.gene76064:CDS 50.0%
CTGCCACATGTTTCCACTCT+TGG - chr5.2:70784170-70784189 None:intergenic 50.0%
GACATCAGGCTCAGCATGTT+GGG - chr5.2:70784920-70784939 None:intergenic 50.0%
GAGTGTCCCTTTGTTCATCC+AGG + chr5.2:70783758-70783777 MS.gene76064:CDS 50.0%
GGAGATGATGAACCTGCCAA+GGG - chr5.2:70784148-70784167 None:intergenic 50.0%
GGAGCAGATGTACAAAGAGC+AGG + chr5.2:70785059-70785078 MS.gene76064:CDS 50.0%
GGTTCATCATCTCCCAAGAG+TGG + chr5.2:70784154-70784173 MS.gene76064:CDS 50.0%
GTACAAAGAGCAGGAGCAGA+TGG + chr5.2:70785068-70785087 MS.gene76064:CDS 50.0%
GTCAAGCTCTTGCTTGATGC+CGG + chr5.2:70783425-70783444 MS.gene76064:CDS 50.0%
GTTGTCCAAATCGCGTAGGA+AGG + chr5.2:70783517-70783536 MS.gene76064:CDS 50.0%
TAGGGGAACCCCAATCTGAA+AGG - chr5.2:70784795-70784814 None:intergenic 50.0%
TCAAGGTGAAGCCATGCTCA+AGG + chr5.2:70783714-70783733 MS.gene76064:CDS 50.0%
TCAGCATGTTGGGATGCAGT+TGG - chr5.2:70784910-70784929 None:intergenic 50.0%
TGAACTCATCCAAGGGGAGA+TGG + chr5.2:70783574-70783593 MS.gene76064:CDS 50.0%
TGAGAGTAAGCCCTTGAGCA+TGG - chr5.2:70783728-70783747 None:intergenic 50.0%
TGAGATGGAATTGCTCGGTC+TGG + chr5.2:70784273-70784292 MS.gene76064:CDS 50.0%
TGCTGAGCCTGATGTCTCTT+GGG + chr5.2:70784924-70784943 MS.gene76064:CDS 50.0%
TTCATCAGACTGTGCCATGG+AGG + chr5.2:70783076-70783095 MS.gene76064:CDS 50.0%
TTGTACATCTGCTCCACCCA+TGG - chr5.2:70785054-70785073 None:intergenic 50.0%
! AACCAGTGGAGGCATACACA+GGG - chr5.2:70784006-70784025 None:intergenic 50.0%
! ATGGATAACTTGCGCGAAGG+TGG - chr5.2:70784570-70784589 None:intergenic 50.0%
! CAAATCGCGTAGGAAGGTGT+TGG + chr5.2:70783523-70783542 MS.gene76064:CDS 50.0%
! CGCGAAGGTGGTTCATGTTT+TGG - chr5.2:70784558-70784577 None:intergenic 50.0%
! CTTCATTGTGCTGTTGCTGG+TGG + chr5.2:70783380-70783399 MS.gene76064:CDS 50.0%
! GCTCTTCATTGTGCTGTTGC+TGG + chr5.2:70783377-70783396 MS.gene76064:CDS 50.0%
! TGAAGGCATAGCTGAACCAG+TGG - chr5.2:70784020-70784039 None:intergenic 50.0%
!! AGCCTTGTTCGGTATTGTGC+GGG - chr5.2:70783917-70783936 None:intergenic 50.0%
!! CGTCCTTGCAAAGCCTTGTT+CGG - chr5.2:70783928-70783947 None:intergenic 50.0%
!! TGTGGGTGTTGATGGTTGCA+TGG - chr5.2:70784482-70784501 None:intergenic 50.0%
!!! TGGTTCTGAGTTTTCGCTCG+AGG + chr5.2:70783400-70783419 MS.gene76064:CDS 50.0%
AACACCACCCATGTCTCCCT+TGG + chr5.2:70784129-70784148 MS.gene76064:CDS 55.0%
ACGACCCCTTGCGAAACTCT+GGG - chr5.2:70783838-70783857 None:intergenic 55.0%
AGGCATAGCTGAACCAGTGG+AGG - chr5.2:70784017-70784036 None:intergenic 55.0%
AGGCTTTGCAAGGACGAGAC+TGG + chr5.2:70783932-70783951 MS.gene76064:CDS 55.0%
ATACACAGGGCGCAGCTCTT+CGG - chr5.2:70783993-70784012 None:intergenic 55.0%
ATGCAAGGAGGAGAGACCCA+AGG + chr5.2:70783786-70783805 MS.gene76064:CDS 55.0%
CAGATTGGGGTTCCCCTACT+GGG + chr5.2:70784797-70784816 MS.gene76064:CDS 55.0%
CATCACTGCAGCTGCTACTG+CGG - chr5.2:70784653-70784672 None:intergenic 55.0%
CCCCAATCGAGTTTCCCAGT+AGG - chr5.2:70784814-70784833 None:intergenic 55.0%
CCCCTACTGGGAAACTCGAT+TGG + chr5.2:70784809-70784828 MS.gene76064:CDS 55.0%
CTCCTCCTTGCATTCTCACC+TGG - chr5.2:70783779-70783798 None:intergenic 55.0%
CTGCAGCTGCCGCATATTCT+CGG - chr5.2:70785001-70785020 None:intergenic 55.0%
GAACCTGCCAAGGGAGACAT+GGG - chr5.2:70784139-70784158 None:intergenic 55.0%
GATGGTGAGTTGCAGCACCA+CGG - chr5.2:70784726-70784745 None:intergenic 55.0%
GCACTCTTCAAACGGCTACC+TGG - chr5.2:70784229-70784248 None:intergenic 55.0%
GCTGGCGCAATCAGATCAAC+CGG - chr5.2:70783488-70783507 None:intergenic 55.0%
GCTGTTACGGAAAGATGGGG+AGG - chr5.2:70784365-70784384 None:intergenic 55.0%
GGAACCCCAATCTGAAAGGC+CGG - chr5.2:70784791-70784810 None:intergenic 55.0%
GGCAGGGAACACAGCTGTAA+GGG - chr5.2:70783817-70783836 None:intergenic 55.0%
GGGAGATGATGAACCTGCCA+AGG - chr5.2:70784149-70784168 None:intergenic 55.0%
GTCGTCCGGCCTTTCAGATT+GGG + chr5.2:70784783-70784802 MS.gene76064:CDS 55.0%
GTGACGAGCTGAACAAGCTG+AGG + chr5.2:70784842-70784861 MS.gene76064:CDS 55.0%
GTGAGGAAGCCCTCACCATA+TGG + chr5.2:70784613-70784632 MS.gene76064:CDS 55.0%
TACATCTGCTCCACCCATGG+TGG - chr5.2:70785051-70785070 None:intergenic 55.0%
TATGGTGAGGGCTTCCTCAC+TGG - chr5.2:70784613-70784632 None:intergenic 55.0%
TCAGATTGGGGTTCCCCTAC+TGG + chr5.2:70784796-70784815 MS.gene76064:CDS 55.0%
TCGAGACGTGCTTCCACCAT+GGG + chr5.2:70785035-70785054 MS.gene76064:CDS 55.0%
TCGTCCGGCCTTTCAGATTG+GGG + chr5.2:70784784-70784803 MS.gene76064:CDS 55.0%
TGAACCTGCCAAGGGAGACA+TGG - chr5.2:70784140-70784159 None:intergenic 55.0%
TGGCGCATCTGCATTGCACT+TGG - chr5.2:70784520-70784539 None:intergenic 55.0%
TGTCGTCCGGCCTTTCAGAT+TGG + chr5.2:70784782-70784801 MS.gene76064:CDS 55.0%
! GAACCAGTGGAGGCATACAC+AGG - chr5.2:70784007-70784026 None:intergenic 55.0%
! GGTGCTGCAACTCACCATCT+TGG + chr5.2:70784727-70784746 MS.gene76064:CDS 55.0%
! TTGGCTGCGCTGCTTTGCAA+AGG - chr5.2:70784692-70784711 None:intergenic 55.0%
ACCCTGCAGGAAGGGTTGGA+AGG - chr5.2:70784763-70784782 None:intergenic 60.0%
AGACGTGCTTCCACCATGGG+TGG + chr5.2:70785038-70785057 MS.gene76064:CDS 60.0%
CAAGGGGTCGTGCCAGAAAG+GGG + chr5.2:70783847-70783866 MS.gene76064:CDS 60.0%
CACGACCCCTTGCGAAACTC+TGG - chr5.2:70783839-70783858 None:intergenic 60.0%
CCCTGCCCAGAGTTTCGCAA+GGG + chr5.2:70783830-70783849 MS.gene76064:CDS 60.0%
CCCTTGCGAAACTCTGGGCA+GGG - chr5.2:70783833-70783852 None:intergenic 60.0%
CCTGCCCAGAGTTTCGCAAG+GGG + chr5.2:70783831-70783850 MS.gene76064:CDS 60.0%
CTACCTGGGAGCTGCAACGA+TGG - chr5.2:70784214-70784233 None:intergenic 60.0%
CTGCAGGAAGGGTTGGAAGG+CGG - chr5.2:70784760-70784779 None:intergenic 60.0%
GCAAGGGGTCGTGCCAGAAA+GGG + chr5.2:70783846-70783865 MS.gene76064:CDS 60.0%
GCCTTCCAACCCTTCCTGCA+GGG + chr5.2:70784759-70784778 MS.gene76064:CDS 60.0%
GGCTTCCTCACTGGAGAGGA+AGG - chr5.2:70784604-70784623 None:intergenic 60.0%
GGGCAGGGAACACAGCTGTA+AGG - chr5.2:70783818-70783837 None:intergenic 60.0%
GTCGAGACGTGCTTCCACCA+TGG + chr5.2:70785034-70785053 MS.gene76064:CDS 60.0%
TACACAGGGCGCAGCTCTTC+GGG - chr5.2:70783992-70784011 None:intergenic 60.0%
TCCCTGCCCAGAGTTTCGCA+AGG + chr5.2:70783829-70783848 MS.gene76064:CDS 60.0%
TGAGGGCTTCCTCACTGGAG+AGG - chr5.2:70784608-70784627 None:intergenic 60.0%
TGCTGCTGCTGTTGACGACG+AGG - chr5.2:70784304-70784323 None:intergenic 60.0%
! TGGGATGCAGTTGGTGCAGC+TGG - chr5.2:70784901-70784920 None:intergenic 60.0%
!! AAGGAGCGTCCATCTCCCCT+TGG - chr5.2:70783586-70783605 None:intergenic 60.0%
!! GCTGCAACGATGGTGGAGTG+AGG - chr5.2:70784204-70784223 None:intergenic 60.0%
CCACCATCGTTGCAGCTCCC+AGG + chr5.2:70784208-70784227 MS.gene76064:CDS 65.0%
CCACCCATGTCTCCCTTGGC+AGG + chr5.2:70784133-70784152 MS.gene76064:CDS 65.0%
CCCCTTGCGAAACTCTGGGC+AGG - chr5.2:70783834-70783853 None:intergenic 65.0%
CCTGCCAAGGGAGACATGGG+TGG - chr5.2:70784136-70784155 None:intergenic 65.0%
CCTGGGAGCTGCAACGATGG+TGG - chr5.2:70784211-70784230 None:intergenic 65.0%
CGACACCCTGCAGGAAGGGT+TGG - chr5.2:70784767-70784786 None:intergenic 65.0%
CGCAAGGGGTCGTGCCAGAA+AGG + chr5.2:70783845-70783864 MS.gene76064:CDS 65.0%
CGCCCTGTGTATGCCTCCAC+TGG + chr5.2:70784001-70784020 MS.gene76064:CDS 65.0%
CGCCTTCCAACCCTTCCTGC+AGG + chr5.2:70784758-70784777 MS.gene76064:CDS 65.0%
CGGACGACACCCTGCAGGAA+GGG - chr5.2:70784771-70784790 None:intergenic 65.0%
!! CCTTCCTGCAGGGTGTCGTC+CGG + chr5.2:70784769-70784788 MS.gene76064:CDS 65.0%
AAGGCCGGACGACACCCTGC+AGG - chr5.2:70784776-70784795 None:intergenic 70.0%
CCGGACGACACCCTGCAGGA+AGG - chr5.2:70784772-70784791 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 70783047 70785098 70783047 ID=MS.gene76064
chr5.2 mRNA 70783047 70785098 70783047 ID=MS.gene76064.t1;Parent=MS.gene76064
chr5.2 exon 70783047 70785098 70783047 ID=MS.gene76064.t1.exon1;Parent=MS.gene76064.t1
chr5.2 CDS 70783047 70785098 70783047 ID=cds.MS.gene76064.t1;Parent=MS.gene76064.t1
Gene Sequence

>MS.gene76064

ATGTGCAGTGGTTCAAAGAGTAAACTTTCTTCATCAGACTGTGCCATGGAGGATAAGCTTCAAAAAGGTGTTCACAACTCCTCAATCTTGCTTGAATTGTCTGCATCTGATGATTTTGATGCTTTCAAGAGAGAAGTAGATGAGAAGGGTTTGGATTTGAATGAAGAAGGCTTTTGGTATGGTAGAAGAATTGGATCGAAGAAGATGGAATCTGAAAAGAGGACTCCTCTTATGATTGCTTCCTTGTTTGGAAGCACTAGAGTGGTCGAGTATATTCTTTCGACAGGGAAGATTGATGTCAACGGAGTTTGTGGTTCCGATATGGCCACTGCTCTTCATTGTGCTGTTGCTGGTGGTTCTGAGTTTTCGCTCGAGGTTGTCAAGCTCTTGCTTGATGCCGGTGCAGATGCTGATTGTCTTGATGCTAGTGGAAACAAACCGGTTGATCTGATTGCGCCAGCCTTTAATTCGTTGTCCAAATCGCGTAGGAAGGTGTTGGAGATGTTTTTGAGAGGTGAGGTAAGTGCTGAACTCATCCAAGGGGAGATGGACGCTCCTTTCTCATTGAAAAAAGAAGGTGGTGATAAGAAAGAGTTTCCTATTGATATATCGTTGCCCGACATAAACAACGGTGTATATGGATCAGATGAGTTTAGGATGTACAGTTTCAAGGTGAAGCCATGCTCAAGGGCTTACTCTCACGATTGGACCGAGTGTCCCTTTGTTCATCCAGGTGAGAATGCAAGGAGGAGAGACCCAAGGAAATACCCTTACAGCTGTGTTCCCTGCCCAGAGTTTCGCAAGGGGTCGTGCCAGAAAGGGGATTCTTGCGAGTATGCACATGGTGTTTTCGAGTCATGGCTACATCCCGCACAATACCGAACAAGGCTTTGCAAGGACGAGACTGGCTGCAATAGAAAAGTCTGCTTCTTTGCTCACAGACCCGAAGAGCTGCGCCCTGTGTATGCCTCCACTGGTTCAGCTATGCCTTCACCAAAGTCCTATTCAGCTAGTGGAATTGACATGACATCGATGAGTCCGTTGTCTCTTAGCTCCTCATCTTTGCCGATGTCAACTGTTTCAACACCACCCATGTCTCCCTTGGCAGGTTCATCATCTCCCAAGAGTGGAAACATGTGGCAGAACAAATTAAACCTCACTCCACCATCGTTGCAGCTCCCAGGTAGCCGTTTGAAGAGTGCTTTGAGTGCAAGGGATCTCGATCTTGAGATGGAATTGCTCGGTCTGGATAGTCCTCGTCGTCAACAGCAGCAGCAACAACAACAACAATTGATTGAAGAGATTGCTAGAATCTCCTCCCCATCTTTCCGTAACAGCGAATTCAACAGAATTGCTGATTTGAATCCAACTAACCTTGATGACCTCTTAGCATCAGCTGATCCTAATTTACTATCTCAACTACATGGGCTTTCCATGCAACCATCAACACCCACACAACAGATGCATTCTCCAAGTGCAATGCAGATGCGCCAAAACATGAACATGGGCCAAAACATGAACCACCTTCGCGCAAGTTATCCATCAAACAATATGCCTTCCTCTCCAGTGAGGAAGCCCTCACCATATGGATTTGATTCATCAGCCGCAGTAGCAGCTGCAGTGATGAATTCTAGGTCTGCTGCCTTTGCAAAGCAGCGCAGCCAAAGTTTCATTGACCGTGGTGCTGCAACTCACCATCTTGGACTTTCTCCGCCTTCCAACCCTTCCTGCAGGGTGTCGTCCGGCCTTTCAGATTGGGGTTCCCCTACTGGGAAACTCGATTGGGGTGTAAACGGTGACGAGCTGAACAAGCTGAGGAAATCCGCTTCTTTTGGGTTCAGAAATAATGGACCAGCTGCACCAACTGCATCCCAACATGCTGAGCCTGATGTCTCTTGGGTTAATTCATTGGTTAAGGATGTTCCATCTGAGAATTCCGGTGTATATGGTGCCGAGAATATGCGGCAGCTGCAGCAATATGATCTGAGTCGAGACGTGCTTCCACCATGGGTGGAGCAGATGTACAAAGAGCAGGAGCAGATGGTAGCATGA
Protein sequence

>MS.gene76064.t1

MCSGSKSKLSSSDCAMEDKLQKGVHNSSILLELSASDDFDAFKREVDEKGLDLNEEGFWYGRRIGSKKMESEKRTPLMIASLFGSTRVVEYILSTGKIDVNGVCGSDMATALHCAVAGGSEFSLEVVKLLLDAGADADCLDASGNKPVDLIAPAFNSLSKSRRKVLEMFLRGEVSAELIQGEMDAPFSLKKEGGDKKEFPIDISLPDINNGVYGSDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCNRKVCFFAHRPEELRPVYASTGSAMPSPKSYSASGIDMTSMSPLSLSSSSLPMSTVSTPPMSPLAGSSSPKSGNMWQNKLNLTPPSLQLPGSRLKSALSARDLDLEMELLGLDSPRRQQQQQQQQQLIEEIARISSPSFRNSEFNRIADLNPTNLDDLLASADPNLLSQLHGLSMQPSTPTQQMHSPSAMQMRQNMNMGQNMNHLRASYPSNNMPSSPVRKPSPYGFDSSAAVAAAVMNSRSAAFAKQRSQSFIDRGAATHHLGLSPPSNPSCRVSSGLSDWGSPTGKLDWGVNGDELNKLRKSASFGFRNNGPAAPTASQHAEPDVSWVNSLVKDVPSENSGVYGAENMRQLQQYDLSRDVLPPWVEQMYKEQEQMVA