AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76164

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76164.t1 MTR_3g452710 97.268 549 5 1 1 539 1 549 0.0 1099
MS.gene76164.t1 MTR_3g452710 85.158 539 23 5 1 539 1 482 0.0 911
MS.gene76164.t1 MTR_2g100130 83.939 330 52 1 211 539 171 500 0.0 589
MS.gene76164.t1 MTR_2g100130 83.939 330 52 1 211 539 181 510 0.0 589
MS.gene76164.t1 MTR_2g100130 83.939 330 52 1 211 539 72 401 0.0 587
MS.gene76164.t1 MTR_2g100130 83.939 330 52 1 211 539 142 471 0.0 587
MS.gene76164.t1 MTR_2g100160 85.106 329 48 1 211 538 91 419 0.0 585
MS.gene76164.t1 MTR_2g100130 83.601 311 50 1 211 520 181 491 0.0 552
MS.gene76164.t1 MTR_2g100130 83.601 311 49 2 211 520 181 490 0.0 548
MS.gene76164.t1 MTR_2g100130 83.601 311 49 2 211 520 142 451 0.0 546
MS.gene76164.t1 MTR_2g100130 82.927 287 48 1 211 496 181 467 9.34e-177 508
MS.gene76164.t1 MTR_1g074880 44.664 253 133 4 252 503 33 279 3.69e-71 230
MS.gene76164.t1 MTR_1g074880 44.664 253 133 4 252 503 33 279 3.89e-71 231
MS.gene76164.t1 MTR_7g112870 41.429 280 156 5 226 503 8 281 1.51e-70 229
MS.gene76164.t1 MTR_7g116380 43.561 264 142 4 241 503 22 279 1.29e-69 226
MS.gene76164.t1 MTR_7g116380 43.561 264 142 4 241 503 22 279 1.30e-69 226
MS.gene76164.t1 MTR_1g079950 42.803 264 144 4 241 503 22 279 1.49e-69 226
MS.gene76164.t1 MTR_1g079950 42.803 264 144 4 241 503 22 279 1.72e-69 227
MS.gene76164.t1 MTR_1g079950 42.803 264 144 4 241 503 22 279 2.05e-69 226
MS.gene76164.t1 MTR_1g079950 42.803 264 144 4 241 503 51 308 2.27e-69 227
MS.gene76164.t1 MTR_5g081230 43.874 253 135 4 252 503 50 296 1.21e-68 224
MS.gene76164.t1 MTR_8g005010 42.857 252 137 4 253 503 32 277 1.63e-68 223
MS.gene76164.t1 MTR_8g098980 42.049 283 153 5 226 503 4 280 6.38e-68 222
MS.gene76164.t1 MTR_1g074880 47.534 223 114 3 282 503 4 224 4.34e-67 218
MS.gene76164.t1 MTR_1g074880 47.534 223 114 3 282 503 4 224 4.65e-67 218
MS.gene76164.t1 MTR_1g043240 41.897 253 140 4 252 503 33 279 2.71e-66 218
MS.gene76164.t1 MTR_1g079950 46.396 222 116 3 283 503 34 253 8.59e-65 214
MS.gene76164.t1 MTR_5g093990 38.225 293 172 6 232 522 4 289 3.45e-59 199
MS.gene76164.t1 MTR_8g062430 42.857 245 134 5 279 521 50 290 3.48e-59 199
MS.gene76164.t1 MTR_5g037200 42.449 245 135 5 279 521 50 290 8.60e-59 197
MS.gene76164.t1 MTR_8g085610 39.273 275 154 7 256 525 9 275 3.50e-58 195
MS.gene76164.t1 MTR_1g039380 43.307 254 136 5 254 505 1 248 7.72e-58 194
MS.gene76164.t1 MTR_8g085610 39.273 275 154 7 256 525 33 299 8.36e-58 195
MS.gene76164.t1 MTR_7g107310 36.594 276 168 4 232 506 14 283 8.49e-58 195
MS.gene76164.t1 MTR_1g039380 45.106 235 125 4 273 505 40 272 5.51e-57 192
MS.gene76164.t1 MTR_8g072600 35.598 368 175 12 222 527 70 437 2.43e-53 187
MS.gene76164.t1 MTR_2g087530 36.604 265 143 8 256 503 562 818 2.82e-41 159
MS.gene76164.t1 MTR_2g087530 36.604 265 143 8 256 503 675 931 5.35e-41 159
MS.gene76164.t1 MTR_1g089370 35.821 268 147 8 252 502 555 814 2.28e-40 156
MS.gene76164.t1 MTR_4g050540 36.226 265 144 8 256 503 680 936 9.52e-40 155
MS.gene76164.t1 MTR_2g099710 33.058 363 156 17 225 527 177 512 2.34e-38 149
MS.gene76164.t1 MTR_8g072600 34.909 275 140 7 222 457 70 344 4.14e-37 140
MS.gene76164.t1 MTR_5g037200 43.165 139 74 4 279 415 50 185 3.46e-28 112
MS.gene76164.t1 MTR_8g107280 42.105 114 66 0 11 124 479 592 4.84e-18 87.8
MS.gene76164.t1 MTR_5g009930 31.579 171 114 2 11 178 2 172 2.43e-17 83.6
MS.gene76164.t1 MTR_5g009930 31.579 171 114 2 11 178 2 172 3.16e-17 84.0
MS.gene76164.t1 MTR_1g030300 34.711 121 78 1 11 130 181 301 3.52e-17 84.7
MS.gene76164.t1 MTR_4g094205 43.636 110 62 0 7 116 484 593 1.42e-16 83.2
MS.gene76164.t1 MTR_1g084100 39.286 112 67 1 7 118 87 197 1.23e-15 79.7
MS.gene76164.t1 MTR_5g012030 39.216 102 62 0 11 112 2 103 1.58e-15 80.1
MS.gene76164.t1 MTR_5g012030 33.621 116 77 0 11 126 392 507 9.60e-14 74.3
MS.gene76164.t1 MTR_2g078020 30.469 128 89 0 6 133 457 584 2.63e-15 79.3
MS.gene76164.t1 MTR_2g078020 34.188 117 75 2 12 128 222 336 2.56e-11 66.6
MS.gene76164.t1 MTR_2g078020 30.469 128 89 0 6 133 457 584 3.40e-15 79.0
MS.gene76164.t1 MTR_2g078020 34.188 117 75 2 12 128 222 336 3.55e-11 66.2
MS.gene76164.t1 MTR_6g053290 31.818 132 86 1 11 142 2 129 4.28e-13 71.2
MS.gene76164.t1 MTR_6g053290 31.818 132 86 1 11 142 2 129 6.26e-13 70.9
MS.gene76164.t1 MTR_1g041435 33.628 113 75 0 14 126 14 126 8.82e-13 70.1
MS.gene76164.t1 MTR_3g087480 33.945 109 70 1 12 120 223 329 1.52e-12 70.5
MS.gene76164.t1 MTR_4g102390 41.573 89 52 0 15 103 119 207 1.81e-12 69.7
MS.gene76164.t1 MTR_7g059150 30.894 123 78 1 8 123 92 214 2.34e-11 64.7
MS.gene76164.t1 MTR_7g115280 33.613 119 79 0 10 128 334 452 3.74e-11 65.9
MS.gene76164.t1 MTR_2g090135 29.927 137 87 2 8 135 95 231 6.04e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76164.t1 AT2G42810 80.112 538 101 2 3 539 5 537 0.0 885
MS.gene76164.t1 AT2G42810 79.963 539 101 3 3 539 5 538 0.0 882
MS.gene76164.t1 AT2G42810 75.233 537 76 4 3 539 5 484 0.0 825
MS.gene76164.t1 AT2G42810 75.233 537 76 4 3 539 5 484 0.0 825
MS.gene76164.t1 AT2G42810 75.233 537 76 4 3 539 5 484 0.0 825
MS.gene76164.t1 AT5G27840 42.391 276 151 5 230 503 16 285 8.09e-71 229
MS.gene76164.t1 AT2G29400 43.922 255 137 3 252 506 50 298 1.02e-70 229
MS.gene76164.t1 AT5G27840 42.391 276 151 5 230 503 16 285 1.15e-70 229
MS.gene76164.t1 AT5G27840 42.391 276 151 5 230 503 16 285 1.17e-70 229
MS.gene76164.t1 AT5G27840 42.391 276 151 5 230 503 16 285 1.17e-70 229
MS.gene76164.t1 AT5G59160 39.032 310 172 6 225 527 10 309 1.45e-70 229
MS.gene76164.t1 AT5G59160 39.032 310 172 6 225 527 10 309 1.45e-70 229
MS.gene76164.t1 AT5G59160 39.032 310 172 6 225 527 10 309 1.45e-70 229
MS.gene76164.t1 AT3G46820 40.909 286 156 5 225 503 10 289 2.90e-70 228
MS.gene76164.t1 AT5G43380 43.083 253 137 4 252 503 33 279 1.17e-68 224
MS.gene76164.t1 AT2G39840 44.664 253 133 4 252 503 47 293 1.35e-68 224
MS.gene76164.t1 AT5G43380 43.083 253 137 4 252 503 33 279 1.44e-68 224
MS.gene76164.t1 AT5G43380 43.083 253 137 4 252 503 33 279 1.62e-68 224
MS.gene76164.t1 AT3G05580 41.667 276 153 5 230 503 16 285 1.66e-68 223
MS.gene76164.t1 AT4G11240 43.478 253 136 4 252 503 34 280 1.51e-67 221
MS.gene76164.t1 AT1G64040 39.789 284 160 5 225 503 3 280 2.06e-65 216
MS.gene76164.t1 AT5G55260 37.667 300 178 6 232 529 4 296 1.43e-60 202
MS.gene76164.t1 AT2G42500 37.943 282 165 5 226 506 11 283 1.53e-60 202
MS.gene76164.t1 AT4G26720 41.897 253 142 5 279 529 47 296 4.99e-60 201
MS.gene76164.t1 AT1G10430 42.857 245 134 5 279 521 50 290 2.98e-59 199
MS.gene76164.t1 AT1G10430 42.857 245 134 5 279 521 50 290 2.98e-59 199
MS.gene76164.t1 AT1G59830 42.857 245 134 5 279 521 50 290 6.92e-59 198
MS.gene76164.t1 AT3G58500 37.143 280 168 5 228 506 11 283 2.15e-58 197
MS.gene76164.t1 AT3G05580 41.564 243 134 5 230 470 16 252 3.95e-58 194
MS.gene76164.t1 AT1G69960 42.449 245 135 5 279 521 51 291 3.95e-58 196
MS.gene76164.t1 AT1G50370 45.852 229 120 4 279 505 46 272 5.83e-57 192
MS.gene76164.t1 AT3G19980 44.255 235 127 4 273 505 40 272 1.92e-55 189
MS.gene76164.t1 AT5G63870 38.361 305 131 11 280 527 81 385 2.36e-54 189
MS.gene76164.t1 AT5G63870 38.361 305 131 11 280 527 81 385 2.36e-54 189
MS.gene76164.t1 AT5G55260 33.431 341 177 8 232 529 4 337 2.26e-53 184
MS.gene76164.t1 AT2G42500 39.111 225 135 2 283 506 13 236 2.52e-50 174
MS.gene76164.t1 AT1G59830 45.226 199 104 4 279 475 50 245 1.02e-49 172
MS.gene76164.t1 AT1G03445 37.273 330 170 12 225 529 446 763 3.60e-48 179
MS.gene76164.t1 AT1G03445 37.273 330 170 12 225 529 446 763 3.81e-48 179
MS.gene76164.t1 AT4G03080 39.419 241 125 7 280 503 581 817 3.66e-41 159
MS.gene76164.t1 AT2G27210 35.741 263 144 8 258 503 683 937 4.30e-38 150
MS.gene76164.t1 AT2G27210 35.741 263 144 8 258 503 688 942 4.44e-38 150
MS.gene76164.t1 AT1G48120 33.333 321 149 8 252 509 630 948 8.43e-38 149
MS.gene76164.t1 AT1G08420 36.719 256 137 8 265 503 706 953 1.28e-37 149
MS.gene76164.t1 AT5G63870 37.963 216 100 6 280 461 81 296 1.60e-37 140
MS.gene76164.t1 AT1G08420 36.719 256 137 8 265 503 701 948 1.77e-37 148
MS.gene76164.t1 AT5G10900 30.606 330 181 8 227 509 163 491 4.35e-35 139
MS.gene76164.t1 AT5G10900 30.606 330 181 8 227 509 163 491 4.48e-35 139
MS.gene76164.t1 AT5G10900 30.606 330 181 8 227 509 163 491 4.91e-35 139
MS.gene76164.t1 AT2G42500 42.056 107 59 2 279 382 57 163 6.90e-21 90.5
MS.gene76164.t1 AT2G42500 40.541 111 63 2 279 386 57 167 9.59e-21 90.1
MS.gene76164.t1 AT2G42500 42.056 107 59 2 279 382 57 163 1.15e-20 90.1
MS.gene76164.t1 AT4G11260 35.398 113 73 0 11 123 2 114 2.07e-16 81.3
MS.gene76164.t1 AT3G17970 44.340 106 59 0 11 116 474 579 6.15e-16 81.3
MS.gene76164.t1 AT5G09420 38.333 120 74 0 7 126 484 603 6.95e-16 81.3
MS.gene76164.t1 AT1G62740 40.196 102 61 0 11 112 2 103 2.32e-15 79.3
MS.gene76164.t1 AT1G62740 30.508 118 82 0 11 128 382 499 1.79e-11 67.0
MS.gene76164.t1 AT1G12270 36.667 120 76 0 11 130 2 121 9.09e-15 77.4
MS.gene76164.t1 AT1G12270 31.624 117 80 0 12 128 384 500 1.87e-11 67.0
MS.gene76164.t1 AT4G08320 35.043 117 75 1 11 126 175 291 9.54e-15 77.0
MS.gene76164.t1 AT4G08320 35.043 117 75 1 11 126 175 291 1.38e-14 76.3
MS.gene76164.t1 AT1G56440 37.500 120 74 1 15 134 88 206 1.39e-14 76.6
MS.gene76164.t1 AT1G56440 37.500 120 74 1 15 134 78 196 1.44e-14 76.6
MS.gene76164.t1 AT1G04190 35.833 120 76 1 2 120 5 124 3.53e-14 74.3
MS.gene76164.t1 AT4G12400 40.196 102 61 0 11 112 2 103 3.64e-14 75.5
MS.gene76164.t1 AT4G12400 30.508 118 82 0 11 128 369 486 3.37e-11 66.2
MS.gene76164.t1 AT4G12400 40.196 102 61 0 11 112 2 103 3.71e-14 75.5
MS.gene76164.t1 AT4G12400 30.508 118 82 0 11 128 369 486 3.67e-11 66.2
MS.gene76164.t1 AT4G22670 42.574 101 57 1 3 103 116 215 1.25e-13 73.6
MS.gene76164.t1 AT4G23570 30.282 142 93 2 33 168 24 165 1.20e-12 69.7
MS.gene76164.t1 AT4G23570 30.282 142 93 2 33 168 24 165 1.20e-12 69.7
MS.gene76164.t1 AT3G14950 35.000 120 76 1 12 131 259 376 2.60e-12 70.1
MS.gene76164.t1 AT3G58620 26.446 121 89 0 6 126 444 564 2.66e-12 70.1
MS.gene76164.t1 AT3G58620 26.446 121 89 0 6 126 444 564 3.81e-12 69.3
MS.gene76164.t1 AT1G53300 32.500 120 79 1 9 128 225 342 8.40e-12 68.6
MS.gene76164.t1 AT2G42580 30.328 122 83 2 7 128 216 335 2.17e-11 67.0
MS.gene76164.t1 AT5G65160 29.508 122 86 0 13 134 472 593 2.39e-11 66.6
MS.gene76164.t1 AT4G23570 30.070 143 93 3 33 168 24 166 2.52e-11 65.9
MS.gene76164.t1 AT5G10090 29.204 113 80 0 18 130 478 590 2.66e-11 66.6

Find 114 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAACCTTTGAATATTT+AGG 0.215738 3.1:-35590071 None:intergenic
GTTACCTGATCACAGTAATT+TGG 0.220828 3.1:-35595280 None:intergenic
TTGGTCTGCTGTTGGTCCTT+GGG 0.246842 3.1:+35592526 MS.gene76164:CDS
TAGCAAGGTAAACTGCATTT+TGG 0.255545 3.1:-35589971 None:intergenic
TTCAATTTCTTTGTTGCATC+AGG 0.258423 3.1:-35590872 None:intergenic
CGCTTGCTAGGTCCTCTTCC+AGG 0.271139 3.1:-35595040 None:intergenic
GTTGGTCTGCTGTTGGTCCT+TGG 0.283017 3.1:+35592525 MS.gene76164:CDS
TTCTTGAAGGATAATAATTT+AGG 0.289596 3.1:+35595103 MS.gene76164:CDS
GAAAATCCATATCTATTTAA+TGG 0.291516 3.1:+35594293 MS.gene76164:CDS
AGAAGGGGATACTATTACTT+TGG 0.310255 3.1:+35593468 MS.gene76164:CDS
GTAATGTTTGGTTTCAAATC+AGG 0.331237 3.1:-35595480 None:intergenic
ACACAAGCAATTGAGCTAAA+TGG 0.332178 3.1:+35589948 MS.gene76164:CDS
TTTGTTGCATCAGGATCATT+TGG 0.332421 3.1:-35590863 None:intergenic
TATTCAGGAGCAAGAATAGA+AGG 0.343533 3.1:+35593451 MS.gene76164:CDS
ACCTATTGAACGGAAATCTA+TGG 0.344050 3.1:-35590978 None:intergenic
TGCTGTTGGTCCTTGGGGCA+TGG 0.350317 3.1:+35592532 MS.gene76164:CDS
CTGAAATCCGATCAATTAAT+CGG 0.356487 3.1:+35594855 MS.gene76164:CDS
CATCTTAGGCTCGAGGAATA+TGG 0.356761 3.1:+35590008 MS.gene76164:CDS
AACAGAAGTGCTTGCATAAA+CGG 0.363037 3.1:+35593524 MS.gene76164:CDS
GATGTCGAGCCACAGTATTC+AGG 0.365324 3.1:+35593436 MS.gene76164:intron
AAATCTATGGATTCAGCTAT+TGG 0.370862 3.1:-35590965 None:intergenic
TAAGCCATTGGCTTGACATC+AGG 0.385233 3.1:-35595915 None:intergenic
TCTATTTAATGGTGACTTTG+TGG 0.389007 3.1:+35594304 MS.gene76164:CDS
CCTCTTCCAGGGAGAGGTTG+TGG 0.389634 3.1:-35595028 None:intergenic
AGTATTCTGCTGTTTACCTT+TGG 0.392555 3.1:+35594763 MS.gene76164:CDS
TCCATAGATTTCCGTTCAAT+AGG 0.396664 3.1:+35590977 MS.gene76164:CDS
AGGCGCTTCAAAACGAATAA+AGG 0.396810 3.1:-35595460 None:intergenic
AGGTGCTGCTCATCTCGGGC+TGG 0.397594 3.1:+35590205 MS.gene76164:CDS
CGTGGTGTAGGCCTTTCTTT+CGG 0.405811 3.1:+35595061 MS.gene76164:CDS
AACATTTGTTGAACTATTTG+CGG 0.408597 3.1:+35594739 MS.gene76164:CDS
AAGTCACCATTAAATAGATA+TGG 0.408912 3.1:-35594299 None:intergenic
TGCTCCAAATTACTGTGATC+AGG 0.411289 3.1:+35595276 MS.gene76164:CDS
AAGAGCATGAACAAGATATA+TGG 0.417540 3.1:+35594683 MS.gene76164:CDS
AATGGTGACTTTGTGGATAG+AGG 0.418839 3.1:+35594311 MS.gene76164:CDS
AGCAGTGACAGTAGCAGTTA+TGG 0.421990 3.1:+35592446 MS.gene76164:CDS
TCGGTGGTGATGTTACAAAA+AGG 0.423551 3.1:+35595080 MS.gene76164:CDS
AGGAAAGCGCCGCAATTCTT+CGG 0.427163 3.1:+35592401 MS.gene76164:intron
AGGCGAGGTGCTGCTCATCT+CGG 0.427181 3.1:+35590200 MS.gene76164:CDS
GGTGCTGCTCATCTCGGGCT+GGG 0.431866 3.1:+35590206 MS.gene76164:CDS
TGAGCTCAACGGGCTGCCTT+CGG 0.437951 3.1:+35594268 MS.gene76164:CDS
TGGTGGAGTAGCTGCTATAC+TGG 0.444264 3.1:+35592552 MS.gene76164:CDS
GGCGAGGTGCTGCTCATCTC+GGG 0.446953 3.1:+35590201 MS.gene76164:CDS
AGTAAAGGACGAGGGTTATG+AGG 0.450555 3.1:+35595219 MS.gene76164:CDS
GCTGCAAATGTAGTAATGTT+TGG 0.450796 3.1:-35595492 None:intergenic
TCTCGGGCTGGGAAAATTCA+AGG 0.456210 3.1:+35590217 MS.gene76164:CDS
CGGTGCATCTATACCTTCCT+CGG 0.467541 3.1:-35594891 None:intergenic
GGTTGATGTGTGAGTTGCTA+TGG 0.470365 3.1:+35594999 MS.gene76164:CDS
CACAAAACCGATTAATTGAT+CGG 0.472508 3.1:-35594862 None:intergenic
GGATTTCGTAAAGAAAATGA+TGG 0.477932 3.1:+35593489 MS.gene76164:CDS
CATTACTACATTTGCAGCAG+TGG 0.484793 3.1:+35595497 MS.gene76164:CDS
ATTGGACGCTTCACCGATCC+TGG 0.495364 3.1:-35590947 None:intergenic
CTAGGTCCTCTTCCAGGGAG+AGG 0.499390 3.1:-35595034 None:intergenic
AATTGTGGTTGGTCTGCTGT+TGG 0.499758 3.1:+35592518 MS.gene76164:CDS
AGGCCTACACCACGCTTGCT+AGG 0.500648 3.1:-35595052 None:intergenic
TGGTCTGCTGTTGGTCCTTG+GGG 0.503725 3.1:+35592527 MS.gene76164:CDS
TGATGCAACAAAGAAATTGA+AGG 0.507056 3.1:+35590874 MS.gene76164:CDS
TAACATCACCACCGAAAGAA+AGG 0.508338 3.1:-35595072 None:intergenic
CACTGCTGCTATGGCAACTT+CGG 0.523744 3.1:-35592430 None:intergenic
TTTAAGTGCATGTCTCCATC+AGG 0.524892 3.1:+35594371 MS.gene76164:CDS
TGTTGTTATAGGGTTACTAC+AGG 0.525539 3.1:+35590180 MS.gene76164:intron
CCACAACCTCTCCCTGGAAG+AGG 0.528098 3.1:+35595028 MS.gene76164:CDS
GTGTATATAGATCAATTGCA+TGG 0.529659 3.1:-35589929 None:intergenic
TGCTACTGTCACTGCTGCTA+TGG 0.532576 3.1:-35592439 None:intergenic
AGTGATCCACAACCTCTCCC+TGG 0.533336 3.1:+35595022 MS.gene76164:CDS
GAAGAAGCTATTTCTGTACC+AGG 0.536670 3.1:+35590929 MS.gene76164:CDS
ATCGTGCCTTTGCTCATCTT+AGG 0.538139 3.1:+35589994 MS.gene76164:CDS
GGACCTAGCAAGCGTGGTGT+AGG 0.541640 3.1:+35595049 MS.gene76164:CDS
AAGTTGTTTGCATAAGCCAT+TGG 0.542638 3.1:-35595927 None:intergenic
GGTGCATCTATACCTTCCTC+GGG 0.543952 3.1:-35594890 None:intergenic
AGCTATTTCTGTACCAGGAT+CGG 0.552634 3.1:+35590934 MS.gene76164:CDS
GCTGCTATGGCAACTTCGGT+TGG 0.553389 3.1:-35592426 None:intergenic
AAGCCATTGGCTTGACATCA+GGG 0.553710 3.1:-35595914 None:intergenic
TTGTGGCGATGTGCATGGTC+AGG 0.553831 3.1:+35593735 MS.gene76164:CDS
CACAATTGTAGCTACTATTG+TGG 0.556197 3.1:-35592502 None:intergenic
TATGGCAGTGGTGGTCATGT+TGG 0.558913 3.1:+35592464 MS.gene76164:CDS
CTTTGAATGCTTCATTAGCA+AGG 0.559030 3.1:-35589544 None:intergenic
GGTGTAGGCCTTTCTTTCGG+TGG 0.561941 3.1:+35595064 MS.gene76164:CDS
ATTCAGGAGCAAGAATAGAA+GGG 0.564418 3.1:+35593452 MS.gene76164:CDS
TCAAAATAGTACCTATTGAA+CGG 0.564875 3.1:-35590988 None:intergenic
ACAGTTATGTCGACAAGAGA+AGG 0.566155 3.1:-35593688 None:intergenic
GCTTGCTAGGTCCTCTTCCA+GGG 0.567459 3.1:-35595039 None:intergenic
TGTGCGATCTCATGAAGTAA+AGG 0.569085 3.1:+35595204 MS.gene76164:CDS
ATCTCATGAAGTAAAGGACG+AGG 0.570634 3.1:+35595210 MS.gene76164:CDS
ATAGTAGCTACAATTGTGGT+TGG 0.570813 3.1:+35592507 MS.gene76164:CDS
CTTGCTAATGAAGCATTCAA+AGG 0.570823 3.1:+35589545 MS.gene76164:CDS
AGTTGATCCTAAATATTCAA+AGG 0.571712 3.1:+35590064 MS.gene76164:CDS
TCGTTTATCACATGAGCCAA+AGG 0.573998 3.1:-35594779 None:intergenic
GACAGTAGCAGTTATGGCAG+TGG 0.575800 3.1:+35592452 MS.gene76164:CDS
CGGTTGGCACCGAAGAATTG+CGG 0.579866 3.1:-35592410 None:intergenic
ACTGTTTGTGGCGATGTGCA+TGG 0.587689 3.1:+35593730 MS.gene76164:CDS
GTCGACATAACTGTTCCTCA+TGG 0.591645 3.1:+35593697 MS.gene76164:CDS
TGTATATAGATCAATTGCAT+GGG 0.597547 3.1:-35589928 None:intergenic
CTTTGCTCATCTTAGGCTCG+AGG 0.598202 3.1:+35590001 MS.gene76164:CDS
ATTGGCTTGACATCAGGGTG+TGG 0.600031 3.1:-35595909 None:intergenic
CACAATAGTAGCTACAATTG+TGG 0.602498 3.1:+35592503 MS.gene76164:CDS
CTCGAGCCTAAGATGAGCAA+AGG 0.604076 3.1:-35590000 None:intergenic
TTCAGGAGCAAGAATAGAAG+GGG 0.604663 3.1:+35593453 MS.gene76164:CDS
ATTCTTGCTCCTGAATACTG+TGG 0.606734 3.1:-35593445 None:intergenic
TCAGCTATATATCTAGCTAG+AGG 0.610124 3.1:+35594647 MS.gene76164:intron
AGTAGCAGTTATGGCAGTGG+TGG 0.612655 3.1:+35592455 MS.gene76164:CDS
TGTTGGTCCTTGGGGCATGG+TGG 0.613632 3.1:+35592535 MS.gene76164:CDS
AGCTACTCCACCATGCCCCA+AGG 0.616800 3.1:-35592542 None:intergenic
ACACCCTGATGTCAAGCCAA+TGG 0.616964 3.1:+35595911 MS.gene76164:CDS
GGAAGAGGACCTAGCAAGCG+TGG 0.624373 3.1:+35595043 MS.gene76164:CDS
ACTTAAATGCAAACAAAGTG+AGG 0.624984 3.1:-35594355 None:intergenic
TGCAATACTAGATGCTACAA+AGG 0.625792 3.1:+35590034 MS.gene76164:CDS
TTGATTATGAGAACATTCTG+AGG 0.627087 3.1:-35595950 None:intergenic
TGAAGAGAATAATGTCGCAA+AGG 0.629106 3.1:+35589505 MS.gene76164:CDS
GCATCTATACCTTCCTCGGG+AGG 0.634980 3.1:-35594887 None:intergenic
GAGCAAAGGCACGATTAGCA+AGG 0.640637 3.1:-35589986 None:intergenic
TTTCTGTAGATGGGTAACAA+AGG 0.644956 3.1:+35595435 MS.gene76164:intron
TTATAGGGTTACTACAGGCG+AGG 0.653426 3.1:+35590185 MS.gene76164:intron
GGTTATGAGGTTGATCATGA+CGG 0.656315 3.1:+35595232 MS.gene76164:CDS
TCTCATGAAGTAAAGGACGA+GGG 0.727443 3.1:+35595211 MS.gene76164:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAATAATAATAAA+TGG - chr3.1:35594023-35594042 None:intergenic 0.0%
!! TAAAAAATAAAATAATTATT+AGG + chr3.1:35592091-35592110 MS.gene76164:intron 0.0%
!! ACAAAATATACAAAAAAAAA+AGG - chr3.1:35593334-35593353 None:intergenic 10.0%
!! TAGATATTCTAATAAAATAT+AGG + chr3.1:35590776-35590795 MS.gene76164:intron 10.0%
!!! ATTGTTAATTTTAGTAATTT+TGG + chr3.1:35590498-35590517 MS.gene76164:intron 10.0%
!!! ATTTTTCAATAATAAAGTTA+TGG + chr3.1:35591354-35591373 MS.gene76164:intron 10.0%
!!! GTTTTAATAAAAAATGAAAA+TGG + chr3.1:35595569-35595588 MS.gene76164:intron 10.0%
!!! TATTTTATTAGAATATCTAA+AGG - chr3.1:35590775-35590794 None:intergenic 10.0%
!!! TTTAAAATATAAATTCAACA+CGG - chr3.1:35593999-35594018 None:intergenic 10.0%
!! AAAAAAGGTTATGAATATTA+AGG - chr3.1:35593319-35593338 None:intergenic 15.0%
!! ATATATAGCTGAAAATAATA+TGG - chr3.1:35594639-35594658 None:intergenic 15.0%
!! CATGAAAAATAAAATTGAAA+GGG - chr3.1:35594215-35594234 None:intergenic 15.0%
!! GTATAAATAAAATAAAGGAA+GGG + chr3.1:35590701-35590720 MS.gene76164:intron 15.0%
!! GTGATGTATAAATAAAATAA+AGG + chr3.1:35590696-35590715 MS.gene76164:intron 15.0%
!! TCATGAAAAATAAAATTGAA+AGG - chr3.1:35594216-35594235 None:intergenic 15.0%
!! TGTATAAATAAAATAAAGGA+AGG + chr3.1:35590700-35590719 MS.gene76164:intron 15.0%
!! TTTGTTAATGTATATATGTT+CGG + chr3.1:35594967-35594986 MS.gene76164:intron 15.0%
!!! AACAAAAAAAAAAGCATAAT+TGG - chr3.1:35590161-35590180 None:intergenic 15.0%
!!! GTATTTTTTATAGATGTATT+CGG + chr3.1:35593186-35593205 MS.gene76164:intron 15.0%
!!! TTATAACTTTTTGTATGTTT+TGG + chr3.1:35591122-35591141 MS.gene76164:intron 15.0%
!!! TTTTTTTTGTTGTTGTTATA+GGG + chr3.1:35590170-35590189 MS.gene76164:intron 15.0%
!!! TTTTTTTTTGTTGTTGTTAT+AGG + chr3.1:35590169-35590188 MS.gene76164:intron 15.0%
!! AAACCTATATATCAACAAAT+AGG - chr3.1:35592209-35592228 None:intergenic 20.0%
!! AAATTAACAGGTATGTTTAT+TGG - chr3.1:35593281-35593300 None:intergenic 20.0%
!! AATCACACAATAAACATTAT+TGG - chr3.1:35594542-35594561 None:intergenic 20.0%
!! AATGTAAACAACCAATTAAA+AGG - chr3.1:35592054-35592073 None:intergenic 20.0%
!! ACATAAAACCAATTAATCAT+AGG + chr3.1:35592624-35592643 MS.gene76164:intron 20.0%
!! ACATACAAAAAGTTATAACA+TGG - chr3.1:35591120-35591139 None:intergenic 20.0%
!! AGATCAATTGAAGAAAAAAA+CGG - chr3.1:35594914-35594933 None:intergenic 20.0%
!! GAAAATCCATATCTATTTAA+TGG + chr3.1:35594293-35594312 MS.gene76164:CDS 20.0%
!! TATTTATATGCCTAATGAAA+AGG - chr3.1:35590400-35590419 None:intergenic 20.0%
!! TCAAAAATCTCAAATGAATT+AGG - chr3.1:35592659-35592678 None:intergenic 20.0%
!! TTATTAGAATATCTAAAGGA+AGG - chr3.1:35590771-35590790 None:intergenic 20.0%
!! TTCTTGAAGGATAATAATTT+AGG + chr3.1:35595103-35595122 MS.gene76164:CDS 20.0%
!!! AGCTTAAAATGTTGAATTTT+GGG + chr3.1:35595713-35595732 MS.gene76164:intron 20.0%
!!! ATAAAAGTATTCAAGAAAGA+AGG - chr3.1:35595325-35595344 None:intergenic 20.0%
!!! ATACTATTTTTGATACATCA+TGG + chr3.1:35594435-35594454 MS.gene76164:intron 20.0%
!!! ATTTTATCTAAAACTGAAAG+AGG + chr3.1:35592984-35593003 MS.gene76164:intron 20.0%
!!! GATAGAATGTTAATCTTTTA+GGG - chr3.1:35590737-35590756 None:intergenic 20.0%
!!! GTTTTCAAATTCTACTAATA+AGG + chr3.1:35592919-35592938 MS.gene76164:intron 20.0%
!!! TGATAGAATGTTAATCTTTT+AGG - chr3.1:35590738-35590757 None:intergenic 20.0%
!!! TTCTTTCTTGAATACTTTTA+TGG + chr3.1:35595324-35595343 MS.gene76164:intron 20.0%
!!! TTGATCACTATTCATTTTTA+CGG + chr3.1:35591453-35591472 MS.gene76164:intron 20.0%
! AAAACCAATTAATCATAGGA+CGG + chr3.1:35592628-35592647 MS.gene76164:intron 25.0%
! AAATGAATAGTGATCAAAGA+AGG - chr3.1:35591450-35591469 None:intergenic 25.0%
! AAGATTAACATTCTATCATC+AGG + chr3.1:35590740-35590759 MS.gene76164:intron 25.0%
! AAGTCACCATTAAATAGATA+TGG - chr3.1:35594302-35594321 None:intergenic 25.0%
! AATACATTAAGCATCTAATC+AGG - chr3.1:35594489-35594508 None:intergenic 25.0%
! AATTCTACTAATAAGGATAG+TGG + chr3.1:35592926-35592945 MS.gene76164:intron 25.0%
! ACAAATAGGTGATAAAAAGA+TGG - chr3.1:35592195-35592214 None:intergenic 25.0%
! ACACTTTCATACTTAATTGT+TGG + chr3.1:35589702-35589721 MS.gene76164:intron 25.0%
! AGATTAACATTCTATCATCA+GGG + chr3.1:35590741-35590760 MS.gene76164:intron 25.0%
! AGTATATAGATTACCTTCAT+AGG - chr3.1:35595402-35595421 None:intergenic 25.0%
! AGTGATATCAAACAGAATAT+CGG + chr3.1:35590422-35590441 MS.gene76164:intron 25.0%
! AGTTGATCCTAAATATTCAA+AGG + chr3.1:35590064-35590083 MS.gene76164:CDS 25.0%
! ATAGTATAATGAAACCTAAC+AGG - chr3.1:35594422-35594441 None:intergenic 25.0%
! ATATCTTCATTCAATTTGTG+AGG + chr3.1:35595830-35595849 MS.gene76164:intron 25.0%
! ATTAAAGTTTAAGCATAGGA+TGG - chr3.1:35591837-35591856 None:intergenic 25.0%
! CAAATAGGTGATAAAAAGAT+GGG - chr3.1:35592194-35592213 None:intergenic 25.0%
! GAAAAAAAGAGAGATATTGA+AGG + chr3.1:35590640-35590659 MS.gene76164:intron 25.0%
! GAATTTATTTGACCATTATG+TGG + chr3.1:35593888-35593907 MS.gene76164:intron 25.0%
! GTAGATTAAAGTTTAAGCAT+AGG - chr3.1:35591841-35591860 None:intergenic 25.0%
! TAAACAACCAATTAAAAGGA+AGG - chr3.1:35592050-35592069 None:intergenic 25.0%
! TAAATAAAATAAAGGAAGGG+AGG + chr3.1:35590704-35590723 MS.gene76164:intron 25.0%
! TATCACTCTTGTATCATTAT+AGG + chr3.1:35592381-35592400 MS.gene76164:intron 25.0%
! TCAAAATAGTACCTATTGAA+CGG - chr3.1:35590991-35591010 None:intergenic 25.0%
! TCAGAAAGATATGAAATATG+AGG + chr3.1:35591726-35591745 MS.gene76164:intron 25.0%
! TGAAGAACCTTTGAATATTT+AGG - chr3.1:35590074-35590093 None:intergenic 25.0%
! TGCAACACATTTCTTTATAT+TGG + chr3.1:35592733-35592752 MS.gene76164:intron 25.0%
! TGGAGAAACTAACAATAAAT+AGG + chr3.1:35590518-35590537 MS.gene76164:intron 25.0%
! TGTATATAGATCAATTGCAT+GGG - chr3.1:35589931-35589950 None:intergenic 25.0%
! TTAACAAAACTACGATGAAA+TGG - chr3.1:35594955-35594974 None:intergenic 25.0%
! TTCCAAAGTTCATAGTAAAA+TGG - chr3.1:35591641-35591660 None:intergenic 25.0%
!! AACATTTGTTGAACTATTTG+CGG + chr3.1:35594739-35594758 MS.gene76164:CDS 25.0%
!! ACATTAATATAAGAAGTGTG+TGG - chr3.1:35595358-35595377 None:intergenic 25.0%
!! ATATTCATAGCCTTTTCATT+AGG + chr3.1:35590387-35590406 MS.gene76164:intron 25.0%
!! CAGCTTAAAATGTTGAATTT+TGG + chr3.1:35595712-35595731 MS.gene76164:intron 25.0%
!! CAGGTAATTGGTTTATTATA+TGG + chr3.1:35593754-35593773 MS.gene76164:intron 25.0%
!! GATTGAATTAACTTGATACT+TGG + chr3.1:35591920-35591939 MS.gene76164:intron 25.0%
!! TATATTGATGCATGTTTTCA+AGG + chr3.1:35591284-35591303 MS.gene76164:intron 25.0%
!! TCACCTATTTGTTGATATAT+AGG + chr3.1:35592203-35592222 MS.gene76164:intron 25.0%
!! TCTTTAGTATTAACGGTTTT+CGG + chr3.1:35593253-35593272 MS.gene76164:intron 25.0%
!! TTGGTTGTTTACATTTTCAA+AGG + chr3.1:35592059-35592078 MS.gene76164:intron 25.0%
!! TTTCATTGTTTTCTGTAGAT+GGG + chr3.1:35595426-35595445 MS.gene76164:intron 25.0%
!! TTTTCATTGTTTTCTGTAGA+TGG + chr3.1:35595425-35595444 MS.gene76164:intron 25.0%
!! TTTTTCACATCAATGATATC+AGG - chr3.1:35591312-35591331 None:intergenic 25.0%
!!! AACAAGATATATGGTTTTGA+GGG + chr3.1:35594692-35594711 MS.gene76164:CDS 25.0%
!!! AATGAAAGTGTTAAAGCATT+AGG - chr3.1:35589858-35589877 None:intergenic 25.0%
!!! ATATGCTCAGTAATTTTTTC+TGG + chr3.1:35590556-35590575 MS.gene76164:intron 25.0%
!!! GTTTTATGTCTTGTTAGATA+AGG - chr3.1:35592613-35592632 None:intergenic 25.0%
!!! TGATCACTATTCATTTTTAC+GGG + chr3.1:35591454-35591473 MS.gene76164:intron 25.0%
!!! TTCCATTTTAGTTCACATAT+TGG - chr3.1:35591950-35591969 None:intergenic 25.0%
!!! TTGTTTGAATTTTGACAGTT+TGG + chr3.1:35591209-35591228 MS.gene76164:intron 25.0%
AAATCTATGGATTCAGCTAT+TGG - chr3.1:35590968-35590987 None:intergenic 30.0%
AAATGGAACACACTAACAAA+TGG + chr3.1:35591962-35591981 MS.gene76164:intron 30.0%
AAATGTCTATTGTCTCAACA+AGG + chr3.1:35590280-35590299 MS.gene76164:intron 30.0%
AAGGTTTGTGAGGAAAATAA+CGG - chr3.1:35592288-35592307 None:intergenic 30.0%
AATATAGGTTTCAAATGACC+AGG + chr3.1:35590791-35590810 MS.gene76164:intron 30.0%
AATCACTTATCTTCCTATGA+AGG + chr3.1:35595386-35595405 MS.gene76164:intron 30.0%
AATCTACAGTTACTCCTATA+TGG - chr3.1:35591184-35591203 None:intergenic 30.0%
ACTGACAACGTAAAATTAAC+AGG - chr3.1:35593293-35593312 None:intergenic 30.0%
ACTTAAATGCAAACAAAGTG+AGG - chr3.1:35594358-35594377 None:intergenic 30.0%
AGAAAGAAGGTTGTAACAAA+AGG - chr3.1:35595312-35595331 None:intergenic 30.0%
AGAAATGTGTTGCATTAGAA+CGG - chr3.1:35592727-35592746 None:intergenic 30.0%
AGAATCATGTAGTCAAATAC+TGG + chr3.1:35595595-35595614 MS.gene76164:intron 30.0%
AGATGTATTCGGATTTAACA+GGG + chr3.1:35593197-35593216 MS.gene76164:intron 30.0%
AGTGAAATCAAATGCTACAA+GGG - chr3.1:35593377-35593396 None:intergenic 30.0%
ATCATTATCAGTACTGCATT+AGG + chr3.1:35592694-35592713 MS.gene76164:intron 30.0%
ATGTGTTTATTACCCTTCTT+AGG + chr3.1:35592835-35592854 MS.gene76164:intron 30.0%
ATTCAATTTGTGAGGTTATG+TGG + chr3.1:35595838-35595857 MS.gene76164:intron 30.0%
ATTGAAAACGCATGATTTCA+AGG - chr3.1:35591701-35591720 None:intergenic 30.0%
CACAAAACCGATTAATTGAT+CGG - chr3.1:35594865-35594884 None:intergenic 30.0%
CACCTACAAATTATTGAACA+TGG + chr3.1:35589785-35589804 MS.gene76164:intron 30.0%
CTACAAATTATTGAACATGG+TGG + chr3.1:35589788-35589807 MS.gene76164:intron 30.0%
CTGAAATCCGATCAATTAAT+CGG + chr3.1:35594855-35594874 MS.gene76164:CDS 30.0%
CTGATATCAGTCCATAAAAA+GGG + chr3.1:35590580-35590599 MS.gene76164:intron 30.0%
GAAAACCGTTAATACTAAAG+AGG - chr3.1:35593254-35593273 None:intergenic 30.0%
GAAAGAAGGTTGTAACAAAA+GGG - chr3.1:35595311-35595330 None:intergenic 30.0%
GAAATTAAATATCAGACCAG+TGG - chr3.1:35595137-35595156 None:intergenic 30.0%
GACCAATATGTGAACTAAAA+TGG + chr3.1:35591945-35591964 MS.gene76164:intron 30.0%
GATATGAAATATGAGGTTGA+TGG + chr3.1:35591733-35591752 MS.gene76164:intron 30.0%
GATTAACATTCTATCATCAG+GGG + chr3.1:35590742-35590761 MS.gene76164:intron 30.0%
GGATTTCGTAAAGAAAATGA+TGG + chr3.1:35593489-35593508 MS.gene76164:CDS 30.0%
GTGTATATAGATCAATTGCA+TGG - chr3.1:35589932-35589951 None:intergenic 30.0%
TAACGCCTCTTTAGTATTAA+CGG + chr3.1:35593246-35593265 MS.gene76164:intron 30.0%
TAAGCATATTATATCAGACC+TGG - chr3.1:35590812-35590831 None:intergenic 30.0%
TACGCAACAATCTTCAAAAT+AGG - chr3.1:35593165-35593184 None:intergenic 30.0%
TAGATGTATTCGGATTTAAC+AGG + chr3.1:35593196-35593215 MS.gene76164:intron 30.0%
TATGAAATAACACCAACTCA+AGG - chr3.1:35591266-35591285 None:intergenic 30.0%
TATTCTGCCTAAGAAATGAA+AGG + chr3.1:35592778-35592797 MS.gene76164:intron 30.0%
TCTATTTAATGGTGACTTTG+TGG + chr3.1:35594304-35594323 MS.gene76164:CDS 30.0%
TCTGATATCAGTCCATAAAA+AGG + chr3.1:35590579-35590598 MS.gene76164:intron 30.0%
TGATGCAACAAAGAAATTGA+AGG + chr3.1:35590874-35590893 MS.gene76164:CDS 30.0%
TGTTACAAAAAGGTTCTTGA+AGG + chr3.1:35595090-35595109 MS.gene76164:CDS 30.0%
TGTTAGATAAGGTTATACCT+AGG - chr3.1:35592602-35592621 None:intergenic 30.0%
TTAAAAATGTCAAGAGAGTG+TGG + chr3.1:35590671-35590690 MS.gene76164:intron 30.0%
TTAAATCCTTCGTACAAATG+AGG - chr3.1:35593973-35593992 None:intergenic 30.0%
TTAAGTAGTAGTGATGATAG+TGG + chr3.1:35591586-35591605 MS.gene76164:intron 30.0%
TTCAATTTCTTTGTTGCATC+AGG - chr3.1:35590875-35590894 None:intergenic 30.0%
TTCATTTCTTAGGCAGAATA+GGG - chr3.1:35592778-35592797 None:intergenic 30.0%
TTTATTTGACCATTATGTGG+CGG + chr3.1:35593891-35593910 MS.gene76164:intron 30.0%
TTTCATTTCTTAGGCAGAAT+AGG - chr3.1:35592779-35592798 None:intergenic 30.0%
TTTGTAACTTCCTAAGTTCT+TGG + chr3.1:35591661-35591680 MS.gene76164:intron 30.0%
! AAGAGCATGAACAAGATATA+TGG + chr3.1:35594683-35594702 MS.gene76164:CDS 30.0%
! AATTTAGGTATGTTTTCCAC+TGG + chr3.1:35595118-35595137 MS.gene76164:intron 30.0%
! ACAGTAAAATGTTTTCCATG+AGG - chr3.1:35593715-35593734 None:intergenic 30.0%
! AGAGACATTTTTATGCTTGT+TGG + chr3.1:35592327-35592346 MS.gene76164:intron 30.0%
! ATAAAGTTTTCGTAGTCCAT+GGG + chr3.1:35594801-35594820 MS.gene76164:CDS 30.0%
! CACCATGTTCAATAATTTGT+AGG - chr3.1:35589790-35589809 None:intergenic 30.0%
! CATGTTCAATAATTTGTAGG+TGG - chr3.1:35589787-35589806 None:intergenic 30.0%
! CCTATTCAAATTTTGCCAAA+AGG - chr3.1:35591545-35591564 None:intergenic 30.0%
! CCTTTTGGCAAAATTTGAAT+AGG + chr3.1:35591542-35591561 MS.gene76164:intron 30.0%
! CTTTAGTATTAACGGTTTTC+GGG + chr3.1:35593254-35593273 MS.gene76164:intron 30.0%
! GACATACTTTCTTATTGGTT+TGG + chr3.1:35595865-35595884 MS.gene76164:intron 30.0%
! GACCATTTTACTATGAACTT+TGG + chr3.1:35591636-35591655 MS.gene76164:intron 30.0%
! GGAAAACATTTTACTGTTTG+TGG + chr3.1:35593718-35593737 MS.gene76164:CDS 30.0%
! GTAATGTTTGGTTTCAAATC+AGG - chr3.1:35595483-35595502 None:intergenic 30.0%
! GTACTTTTCAGTTTACTTGT+AGG + chr3.1:35592956-35592975 MS.gene76164:intron 30.0%
! TCTCTTACCTTCCTTTTAAT+TGG + chr3.1:35592040-35592059 MS.gene76164:intron 30.0%
! TCTTTCTTTATTAGCCTGTT+AGG + chr3.1:35594405-35594424 MS.gene76164:intron 30.0%
! TGTTAATTTTACGTTGTCAG+TGG + chr3.1:35593292-35593311 MS.gene76164:intron 30.0%
! TTCTGAAAAAAGGAATTCAC+AGG - chr3.1:35589898-35589917 None:intergenic 30.0%
!! AATTTTGACAGTTTGGTACT+AGG + chr3.1:35591216-35591235 MS.gene76164:intron 30.0%
!! AGGAAAATAACGGATGATTA+GGG - chr3.1:35592278-35592297 None:intergenic 30.0%
!! CAAATTTCCGTTCTGAAAAA+AGG - chr3.1:35589908-35589927 None:intergenic 30.0%
!! CTGAATATTTTTGAGCTCAA+CGG + chr3.1:35594257-35594276 MS.gene76164:CDS 30.0%
!! GAACAAGATATATGGTTTTG+AGG + chr3.1:35594691-35594710 MS.gene76164:CDS 30.0%
!! TGAATATTTTTGAGCTCAAC+GGG + chr3.1:35594258-35594277 MS.gene76164:CDS 30.0%
!!! AGAAGAGTGTCTAAAGTTTT+AGG - chr3.1:35590100-35590119 None:intergenic 30.0%
!!! GATTTTTGAAACAAGTCAAG+TGG + chr3.1:35592670-35592689 MS.gene76164:intron 30.0%
!!! GTGAATTCCTTTTTTCAGAA+CGG + chr3.1:35589898-35589917 MS.gene76164:intron 30.0%
AACACAAGACTCAAAACTAC+TGG - chr3.1:35592124-35592143 None:intergenic 35.0%
AAGTGTATTTGCATTTGTCC+TGG + chr3.1:35593603-35593622 MS.gene76164:intron 35.0%
AAGTTGTTTGCATAAGCCAT+TGG - chr3.1:35595930-35595949 None:intergenic 35.0%
ACAACAAAAAATTGCCCACA+GGG - chr3.1:35591070-35591089 None:intergenic 35.0%
ACACAAGCAATTGAGCTAAA+TGG + chr3.1:35589948-35589967 MS.gene76164:CDS 35.0%
ACCTATTGAACGGAAATCTA+TGG - chr3.1:35590981-35591000 None:intergenic 35.0%
ACTAAATAGGATGATGCCTT+TGG + chr3.1:35592867-35592886 MS.gene76164:intron 35.0%
AGAAGGGGATACTATTACTT+TGG + chr3.1:35593468-35593487 MS.gene76164:CDS 35.0%
AGGCTAATAAAGAAAGAGCT+AGG - chr3.1:35594402-35594421 None:intergenic 35.0%
AGGTAAGAGAAAGAAACACA+AGG - chr3.1:35592030-35592049 None:intergenic 35.0%
AGGTTGTAACAAAAGGGATA+TGG - chr3.1:35595305-35595324 None:intergenic 35.0%
ATAGTAGCTACAATTGTGGT+TGG + chr3.1:35592507-35592526 MS.gene76164:CDS 35.0%
ATATATGTTCGGTATGCGTA+GGG + chr3.1:35594978-35594997 MS.gene76164:intron 35.0%
ATCAAAGAAGGAAATCGCAT+CGG - chr3.1:35591438-35591457 None:intergenic 35.0%
ATCGGCAGTACAATTATATG+AGG - chr3.1:35591420-35591439 None:intergenic 35.0%
ATCTACAACCAAAGTAACCA+CGG + chr3.1:35591855-35591874 MS.gene76164:intron 35.0%
ATTCAGGAGCAAGAATAGAA+GGG + chr3.1:35593452-35593471 MS.gene76164:CDS 35.0%
CACAATAGTAGCTACAATTG+TGG + chr3.1:35592503-35592522 MS.gene76164:CDS 35.0%
CACAATTGTAGCTACTATTG+TGG - chr3.1:35592505-35592524 None:intergenic 35.0%
CATACCTAAAACAATGAACC+AGG - chr3.1:35593624-35593643 None:intergenic 35.0%
CTTTGAATGCTTCATTAGCA+AGG - chr3.1:35589547-35589566 None:intergenic 35.0%
GAGTGAAATCAAATGCTACA+AGG - chr3.1:35593378-35593397 None:intergenic 35.0%
GATATTTCACATCTGTCACA+TGG + chr3.1:35595650-35595669 MS.gene76164:intron 35.0%
GCTGCAAATGTAGTAATGTT+TGG - chr3.1:35595495-35595514 None:intergenic 35.0%
GGCAAAATTTGAATAGGCTA+TGG + chr3.1:35591548-35591567 MS.gene76164:intron 35.0%
GGCTAATAAAGAAAGAGCTA+GGG - chr3.1:35594401-35594420 None:intergenic 35.0%
GTTACCTGATCACAGTAATT+TGG - chr3.1:35595283-35595302 None:intergenic 35.0%
TAAGAAAGAGAGACTGTGAA+TGG + chr3.1:35589820-35589839 MS.gene76164:intron 35.0%
TATATATGTTCGGTATGCGT+AGG + chr3.1:35594977-35594996 MS.gene76164:intron 35.0%
TATTCAGGAGCAAGAATAGA+AGG + chr3.1:35593451-35593470 MS.gene76164:CDS 35.0%
TCAGCTATATATCTAGCTAG+AGG + chr3.1:35594647-35594666 MS.gene76164:intron 35.0%
TCCATAGATTTCCGTTCAAT+AGG + chr3.1:35590977-35590996 MS.gene76164:CDS 35.0%
TCTACAGTTACGCATATCTT+TGG + chr3.1:35591239-35591258 MS.gene76164:intron 35.0%
TCTACCGTCCTATGATTAAT+TGG - chr3.1:35592635-35592654 None:intergenic 35.0%
TGAAGAGAATAATGTCGCAA+AGG + chr3.1:35589505-35589524 MS.gene76164:CDS 35.0%
TGCAATACTAGATGCTACAA+AGG + chr3.1:35590034-35590053 MS.gene76164:CDS 35.0%
TGTTGTTATAGGGTTACTAC+AGG + chr3.1:35590180-35590199 MS.gene76164:intron 35.0%
TTATTTGACCATTATGTGGC+GGG + chr3.1:35593892-35593911 MS.gene76164:intron 35.0%
TTCAATTCACTCAGTTAGCT+GGG + chr3.1:35594592-35594611 MS.gene76164:intron 35.0%
TTGTTTACAGAATGCGTAGA+TGG - chr3.1:35593022-35593041 None:intergenic 35.0%
TTTCAATTCACTCAGTTAGC+TGG + chr3.1:35594591-35594610 MS.gene76164:intron 35.0%
TTTCTGTAGATGGGTAACAA+AGG + chr3.1:35595435-35595454 MS.gene76164:intron 35.0%
TTTGTTGCATCAGGATCATT+TGG - chr3.1:35590866-35590885 None:intergenic 35.0%
! AATATAAGAAGTGTGTGGCA+CGG - chr3.1:35595353-35595372 None:intergenic 35.0%
! AATATCTAAGACACACGACA+TGG - chr3.1:35592804-35592823 None:intergenic 35.0%
! AGATATGGATTTTCTTCCGA+AGG - chr3.1:35594287-35594306 None:intergenic 35.0%
! AGTATTCTGCTGTTTACCTT+TGG + chr3.1:35594763-35594782 MS.gene76164:CDS 35.0%
! CTTGCTAATGAAGCATTCAA+AGG + chr3.1:35589545-35589564 MS.gene76164:CDS 35.0%
! GATAAAGTTTTCGTAGTCCA+TGG + chr3.1:35594800-35594819 MS.gene76164:CDS 35.0%
! GGATTGGCATCTAAAAACTA+TGG + chr3.1:35593136-35593155 MS.gene76164:intron 35.0%
! GTGCTGACATACTTTCTTAT+TGG + chr3.1:35595860-35595879 MS.gene76164:intron 35.0%
! TAAAGTTTTCGTAGTCCATG+GGG + chr3.1:35594802-35594821 MS.gene76164:CDS 35.0%
! TAGCAAGGTAAACTGCATTT+TGG - chr3.1:35589974-35589993 None:intergenic 35.0%
! TCTTTCTTTTCCTTCGTTGA+CGG - chr3.1:35590615-35590634 None:intergenic 35.0%
! TGCTTAAACTTGTATTGACC+AGG + chr3.1:35590826-35590845 MS.gene76164:intron 35.0%
! TGTGATTTTCAATTACTGCC+TGG + chr3.1:35593115-35593134 MS.gene76164:intron 35.0%
! TTATTCGTTTGCATGCCTTT+TGG + chr3.1:35591527-35591546 MS.gene76164:intron 35.0%
! TTGTCCTGGTTCATTGTTTT+AGG + chr3.1:35593617-35593636 MS.gene76164:intron 35.0%
! TTTTCAATTACTGCCTGGAT+TGG + chr3.1:35593120-35593139 MS.gene76164:intron 35.0%
! TTTTTACGGGAATGATTCGA+TGG + chr3.1:35591467-35591486 MS.gene76164:intron 35.0%
!! AAATATGAGGTTGATGGAGA+AGG + chr3.1:35591739-35591758 MS.gene76164:intron 35.0%
!! AACAGAAGTGCTTGCATAAA+CGG + chr3.1:35593524-35593543 MS.gene76164:CDS 35.0%
!! AGCATTGAAAGATTTTCAGC+AGG + chr3.1:35590241-35590260 MS.gene76164:CDS 35.0%
!! CTTTTGTTTGCAACACAATC+TGG - chr3.1:35593651-35593670 None:intergenic 35.0%
!! GAGGAAAATAACGGATGATT+AGG - chr3.1:35592279-35592298 None:intergenic 35.0%
!! TAGGCGTTCTGAAACTAAAT+AGG + chr3.1:35592854-35592873 MS.gene76164:intron 35.0%
!! TAGTTTTTAGATGCCAATCC+AGG - chr3.1:35593136-35593155 None:intergenic 35.0%
AAACACAGCAGTATGTCCAA+AGG - chr3.1:35592886-35592905 None:intergenic 40.0%
AACAAAAAATTGCCCACAGG+GGG - chr3.1:35591068-35591087 None:intergenic 40.0%
AATCAGTTGCAATGCGTTGT+TGG + chr3.1:35590347-35590366 MS.gene76164:intron 40.0%
AATGGTGACTTTGTGGATAG+AGG + chr3.1:35594311-35594330 MS.gene76164:CDS 40.0%
AATTAGCCATGGTGTTTCCA+TGG - chr3.1:35595621-35595640 None:intergenic 40.0%
ACACTCTAGTACTTGTGGAA+AGG - chr3.1:35592307-35592326 None:intergenic 40.0%
ACAGTTATGTCGACAAGAGA+AGG - chr3.1:35593691-35593710 None:intergenic 40.0%
AGGAGTCATTTACAAGACCT+AGG + chr3.1:35592582-35592601 MS.gene76164:intron 40.0%
AGGCGCTTCAAAACGAATAA+AGG - chr3.1:35595463-35595482 None:intergenic 40.0%
AGTTTCAGAACGCCTAAGAA+GGG - chr3.1:35592850-35592869 None:intergenic 40.0%
ATCTCATGAAGTAAAGGACG+AGG + chr3.1:35595210-35595229 MS.gene76164:CDS 40.0%
ATGTAGTCAAATACTGGCCA+TGG + chr3.1:35595601-35595620 MS.gene76164:intron 40.0%
ATTCTTGCTCCTGAATACTG+TGG - chr3.1:35593448-35593467 None:intergenic 40.0%
CAACAAAAAATTGCCCACAG+GGG - chr3.1:35591069-35591088 None:intergenic 40.0%
CACAACAAAAAATTGCCCAC+AGG - chr3.1:35591071-35591090 None:intergenic 40.0%
CATATCTTTGGACCTTGAGT+TGG + chr3.1:35591251-35591270 MS.gene76164:intron 40.0%
CATGGCCAATTTGTGAATGA+TGG + chr3.1:35595668-35595687 MS.gene76164:intron 40.0%
CATTACTACATTTGCAGCAG+TGG + chr3.1:35595497-35595516 MS.gene76164:CDS 40.0%
CGATTACAGATGACAAACGA+GGG - chr3.1:35595746-35595765 None:intergenic 40.0%
CTTCAAATAGCACGCCATAT+AGG + chr3.1:35591167-35591186 MS.gene76164:intron 40.0%
GACATGGCCTTTCATTTCTT+AGG - chr3.1:35592788-35592807 None:intergenic 40.0%
GCTGCTATACTGGTACATTT+AGG + chr3.1:35592562-35592581 MS.gene76164:intron 40.0%
GTCTATTGTCTCAACAAGGT+TGG + chr3.1:35590284-35590303 MS.gene76164:intron 40.0%
GTCTCAACAAGGTTGGAATA+AGG + chr3.1:35590291-35590310 MS.gene76164:intron 40.0%
GTCTGAGTAAGAATGAGAAC+AGG + chr3.1:35591608-35591627 MS.gene76164:intron 40.0%
TAACATCACCACCGAAAGAA+AGG - chr3.1:35595075-35595094 None:intergenic 40.0%
TACTTGTGGAAAGGTTTGTG+AGG - chr3.1:35592298-35592317 None:intergenic 40.0%
TAGTTTCAGAACGCCTAAGA+AGG - chr3.1:35592851-35592870 None:intergenic 40.0%
TATGTGCCTCATTTGTACGA+AGG + chr3.1:35593964-35593983 MS.gene76164:intron 40.0%
TCAGAAGATCATAGAACTGC+AGG - chr3.1:35594241-35594260 None:intergenic 40.0%
TCGATTACAGATGACAAACG+AGG - chr3.1:35595747-35595766 None:intergenic 40.0%
TCGTTTATCACATGAGCCAA+AGG - chr3.1:35594782-35594801 None:intergenic 40.0%
TCTCATGAAGTAAAGGACGA+GGG + chr3.1:35595211-35595230 MS.gene76164:CDS 40.0%
TCTCTACACTCTAGTACTTG+TGG - chr3.1:35592312-35592331 None:intergenic 40.0%
TGCCACCATCATTCACAAAT+TGG - chr3.1:35595676-35595695 None:intergenic 40.0%
TGCTCCAAATTACTGTGATC+AGG + chr3.1:35595276-35595295 MS.gene76164:CDS 40.0%
TGTGCGATCTCATGAAGTAA+AGG + chr3.1:35595204-35595223 MS.gene76164:CDS 40.0%
TTCAGGAGCAAGAATAGAAG+GGG + chr3.1:35593453-35593472 MS.gene76164:CDS 40.0%
TTTAAGTGCATGTCTCCATC+AGG + chr3.1:35594371-35594390 MS.gene76164:CDS 40.0%
TTTCTATGCCGTGGTTACTT+TGG - chr3.1:35591866-35591885 None:intergenic 40.0%
! AAAGTTTTCGTAGTCCATGG+GGG + chr3.1:35594803-35594822 MS.gene76164:CDS 40.0%
! GAGAGACTGTGAATGGTTTT+TGG + chr3.1:35589827-35589846 MS.gene76164:intron 40.0%
! GGATAGAGGATCGTTTTCTT+TGG + chr3.1:35594325-35594344 MS.gene76164:CDS 40.0%
! GGTAGCTGTAACCCTTTTTA+TGG - chr3.1:35590594-35590613 None:intergenic 40.0%
! GGTTATGAGGTTGATCATGA+CGG + chr3.1:35595232-35595251 MS.gene76164:CDS 40.0%
! TCGGTGGTGATGTTACAAAA+AGG + chr3.1:35595080-35595099 MS.gene76164:CDS 40.0%
! TTGGACACATTTTCTTGACC+TGG - chr3.1:35590847-35590866 None:intergenic 40.0%
!! AGCTATTTCTGTACCAGGAT+CGG + chr3.1:35590934-35590953 MS.gene76164:CDS 40.0%
!! GAAGAAGCTATTTCTGTACC+AGG + chr3.1:35590929-35590948 MS.gene76164:CDS 40.0%
!!! GATATATGGTTTTGAGGGTG+AGG + chr3.1:35594697-35594716 MS.gene76164:CDS 40.0%
AACACCATGGCTAATTGCAG+TGG + chr3.1:35595625-35595644 MS.gene76164:intron 45.0%
AAGAGCTAGGGTTTACCTGA+TGG - chr3.1:35594389-35594408 None:intergenic 45.0%
AAGCTGAAGTCTACAGGTGA+AGG - chr3.1:35592002-35592021 None:intergenic 45.0%
ACATACGCAGCCAAGAACTT+AGG - chr3.1:35591674-35591693 None:intergenic 45.0%
ACCTGTAGACTTCAGCTTTG+TGG + chr3.1:35592004-35592023 MS.gene76164:intron 45.0%
AGCAGTGACAGTAGCAGTTA+TGG + chr3.1:35592446-35592465 MS.gene76164:CDS 45.0%
AGGGTATGTCATGGAACATG+AGG - chr3.1:35592259-35592278 None:intergenic 45.0%
AGTAAAGGACGAGGGTTATG+AGG + chr3.1:35595219-35595238 MS.gene76164:CDS 45.0%
ATCGTGCCTTTGCTCATCTT+AGG + chr3.1:35589994-35590013 MS.gene76164:CDS 45.0%
CAAGGTTGGAATAAGGAGCA+TGG + chr3.1:35590298-35590317 MS.gene76164:intron 45.0%
CATCTTAGGCTCGAGGAATA+TGG + chr3.1:35590008-35590027 MS.gene76164:CDS 45.0%
CGGATGATTAGGGTATGTCA+TGG - chr3.1:35592268-35592287 None:intergenic 45.0%
GATGTGCATGGTCAGGTAAT+TGG + chr3.1:35593742-35593761 MS.gene76164:intron 45.0%
GGCCAATTTGTGAATGATGG+TGG + chr3.1:35595671-35595690 MS.gene76164:intron 45.0%
GGGTATGTCATGGAACATGA+GGG - chr3.1:35592258-35592277 None:intergenic 45.0%
GGTATGTCATGGAACATGAG+GGG - chr3.1:35592257-35592276 None:intergenic 45.0%
GTCGACATAACTGTTCCTCA+TGG + chr3.1:35593697-35593716 MS.gene76164:CDS 45.0%
TAAGCTGCCATAGAACACCA+TGG - chr3.1:35595699-35595718 None:intergenic 45.0%
TTATAGGGTTACTACAGGCG+AGG + chr3.1:35590185-35590204 MS.gene76164:intron 45.0%
TTCACAGGATCAGCAAATGC+TGG - chr3.1:35589883-35589902 None:intergenic 45.0%
! GACAGAAGTTTTCTATGCCG+TGG - chr3.1:35591875-35591894 None:intergenic 45.0%
! GGTTGATGTGTGAGTTGCTA+TGG + chr3.1:35594999-35595018 MS.gene76164:CDS 45.0%
! TGAGGGGACTACTATTGACT+TGG - chr3.1:35592241-35592260 None:intergenic 45.0%
!! AAGCCATTGGCTTGACATCA+GGG - chr3.1:35595917-35595936 None:intergenic 45.0%
!! AATTGTGGTTGGTCTGCTGT+TGG + chr3.1:35592518-35592537 MS.gene76164:CDS 45.0%
!! AGGTTGATGGAGAAGGAAGA+AGG + chr3.1:35591746-35591765 MS.gene76164:intron 45.0%
!! GGGACTACTATTGACTTGGA+GGG - chr3.1:35592237-35592256 None:intergenic 45.0%
!! GGTTGATGGAGAAGGAAGAA+GGG + chr3.1:35591747-35591766 MS.gene76164:intron 45.0%
!! TAAGCCATTGGCTTGACATC+AGG - chr3.1:35595918-35595937 None:intergenic 45.0%
!!! GGGGTCTTTTCAGTGTTGAT+GGG + chr3.1:35594822-35594841 MS.gene76164:CDS 45.0%
!!! GGGTCTTTTCAGTGTTGATG+GGG + chr3.1:35594823-35594842 MS.gene76164:CDS 45.0%
AAAAAATTGCCCACAGGGGG+AGG - chr3.1:35591065-35591084 None:intergenic 50.0%
AAAAATTGCCCACAGGGGGA+GGG - chr3.1:35591064-35591083 None:intergenic 50.0%
AAGGAAGAAGGGCAAAGTGG+AGG + chr3.1:35591758-35591777 MS.gene76164:intron 50.0%
ACACCCTGATGTCAAGCCAA+TGG + chr3.1:35595911-35595930 MS.gene76164:CDS 50.0%
ACTGTTTGTGGCGATGTGCA+TGG + chr3.1:35593730-35593749 MS.gene76164:CDS 50.0%
AGGGGGAGGGAGATTTAGAA+AGG - chr3.1:35591051-35591070 None:intergenic 50.0%
AGTAGCAGTTATGGCAGTGG+TGG + chr3.1:35592455-35592474 MS.gene76164:CDS 50.0%
CAACACTGAAAAGACCCCCA+TGG - chr3.1:35594820-35594839 None:intergenic 50.0%
CACTGCTGCTATGGCAACTT+CGG - chr3.1:35592433-35592452 None:intergenic 50.0%
CGGTGCATCTATACCTTCCT+CGG - chr3.1:35594894-35594913 None:intergenic 50.0%
CGTGGTGTAGGCCTTTCTTT+CGG + chr3.1:35595061-35595080 MS.gene76164:CDS 50.0%
CTCGAGCCTAAGATGAGCAA+AGG - chr3.1:35590003-35590022 None:intergenic 50.0%
CTTTGCTCATCTTAGGCTCG+AGG + chr3.1:35590001-35590020 MS.gene76164:CDS 50.0%
GACAGTAGCAGTTATGGCAG+TGG + chr3.1:35592452-35592471 MS.gene76164:CDS 50.0%
GAGAAGGAAGAAGGGCAAAG+TGG + chr3.1:35591755-35591774 MS.gene76164:intron 50.0%
GATGTCGAGCCACAGTATTC+AGG + chr3.1:35593436-35593455 MS.gene76164:intron 50.0%
GCCACAAAGCTGAAGTCTAC+AGG - chr3.1:35592008-35592027 None:intergenic 50.0%
GGTGCATCTATACCTTCCTC+GGG - chr3.1:35594893-35594912 None:intergenic 50.0%
GTTACAGCTACCGTCAACGA+AGG + chr3.1:35590602-35590621 MS.gene76164:intron 50.0%
TACTGGCCATGGAAACACCA+TGG + chr3.1:35595612-35595631 MS.gene76164:intron 50.0%
TATGGCAGTGGTGGTCATGT+TGG + chr3.1:35592464-35592483 MS.gene76164:CDS 50.0%
TCTGCCACTGCAATTAGCCA+TGG - chr3.1:35595632-35595651 None:intergenic 50.0%
TGCTACTGTCACTGCTGCTA+TGG - chr3.1:35592442-35592461 None:intergenic 50.0%
TGGTGGAGTAGCTGCTATAC+TGG + chr3.1:35592552-35592571 MS.gene76164:CDS 50.0%
TTGGTCTGCTGTTGGTCCTT+GGG + chr3.1:35592526-35592545 MS.gene76164:CDS 50.0%
! GAGCAAAGGCACGATTAGCA+AGG - chr3.1:35589989-35590008 None:intergenic 50.0%
! TCTCGGGCTGGGAAAATTCA+AGG + chr3.1:35590217-35590236 MS.gene76164:CDS 50.0%
!! AGGAAAGCGCCGCAATTCTT+CGG + chr3.1:35592401-35592420 MS.gene76164:intron 50.0%
!! ATTGGCTTGACATCAGGGTG+TGG - chr3.1:35595912-35595931 None:intergenic 50.0%
!! GGGGACTACTATTGACTTGG+AGG - chr3.1:35592238-35592257 None:intergenic 50.0%
!! GGGGGTCTTTTCAGTGTTGA+TGG + chr3.1:35594821-35594840 MS.gene76164:CDS 50.0%
!! TGTGAATGATGGTGGCACCA+TGG + chr3.1:35595679-35595698 MS.gene76164:intron 50.0%
AGTGATCCACAACCTCTCCC+TGG + chr3.1:35595022-35595041 MS.gene76164:CDS 55.0%
ATTGGACGCTTCACCGATCC+TGG - chr3.1:35590950-35590969 None:intergenic 55.0%
CTAAATCTCCCTCCCCCTGT+GGG + chr3.1:35591053-35591072 MS.gene76164:intron 55.0%
GCATCTATACCTTCCTCGGG+AGG - chr3.1:35594890-35594909 None:intergenic 55.0%
GCTGCTATGGCAACTTCGGT+TGG - chr3.1:35592429-35592448 None:intergenic 55.0%
GGTGGCACCATGGTGTTCTA+TGG + chr3.1:35595689-35595708 MS.gene76164:intron 55.0%
GGTGTAGGCCTTTCTTTCGG+TGG + chr3.1:35595064-35595083 MS.gene76164:CDS 55.0%
TCTAAATCTCCCTCCCCCTG+TGG + chr3.1:35591052-35591071 MS.gene76164:intron 55.0%
TGGTCTGCTGTTGGTCCTTG+GGG + chr3.1:35592527-35592546 MS.gene76164:CDS 55.0%
TTGTGGCGATGTGCATGGTC+AGG + chr3.1:35593735-35593754 MS.gene76164:CDS 55.0%
! ACCATTATGTGGCGGGACTG+GGG + chr3.1:35593899-35593918 MS.gene76164:intron 55.0%
! CGGTTGGCACCGAAGAATTG+CGG - chr3.1:35592413-35592432 None:intergenic 55.0%
! GACCATTATGTGGCGGGACT+GGG + chr3.1:35593898-35593917 MS.gene76164:intron 55.0%
! GCTTGCTAGGTCCTCTTCCA+GGG - chr3.1:35595042-35595061 None:intergenic 55.0%
! GTTGGTCTGCTGTTGGTCCT+TGG + chr3.1:35592525-35592544 MS.gene76164:CDS 55.0%
! TGACCATTATGTGGCGGGAC+TGG + chr3.1:35593897-35593916 MS.gene76164:intron 55.0%
! TTTTGTGAGCCTCCCGAGGA+AGG + chr3.1:35594878-35594897 MS.gene76164:CDS 55.0%
AGCTACTCCACCATGCCCCA+AGG - chr3.1:35592545-35592564 None:intergenic 60.0%
AGGCCTACACCACGCTTGCT+AGG - chr3.1:35595055-35595074 None:intergenic 60.0%
CCACAACCTCTCCCTGGAAG+AGG + chr3.1:35595028-35595047 MS.gene76164:CDS 60.0%
CCTCTTCCAGGGAGAGGTTG+TGG - chr3.1:35595031-35595050 None:intergenic 60.0%
CTAGGTCCTCTTCCAGGGAG+AGG - chr3.1:35595037-35595056 None:intergenic 60.0%
GGAAGAGGACCTAGCAAGCG+TGG + chr3.1:35595043-35595062 MS.gene76164:CDS 60.0%
GGACCTAGCAAGCGTGGTGT+AGG + chr3.1:35595049-35595068 MS.gene76164:CDS 60.0%
TCCCCAGTCCCGCCACATAA+TGG - chr3.1:35593903-35593922 None:intergenic 60.0%
TGCTGTTGGTCCTTGGGGCA+TGG + chr3.1:35592532-35592551 MS.gene76164:CDS 60.0%
TGTTGGTCCTTGGGGCATGG+TGG + chr3.1:35592535-35592554 MS.gene76164:CDS 60.0%
! CGCTTGCTAGGTCCTCTTCC+AGG - chr3.1:35595043-35595062 None:intergenic 60.0%
!! AGGCGAGGTGCTGCTCATCT+CGG + chr3.1:35590200-35590219 MS.gene76164:CDS 60.0%
!! TCGGTTTTGTGAGCCTCCCG+AGG + chr3.1:35594874-35594893 MS.gene76164:CDS 60.0%
!! TGAGCTCAACGGGCTGCCTT+CGG + chr3.1:35594268-35594287 MS.gene76164:CDS 60.0%
!! AGGTGCTGCTCATCTCGGGC+TGG + chr3.1:35590205-35590224 MS.gene76164:CDS 65.0%
!! GGCGAGGTGCTGCTCATCTC+GGG + chr3.1:35590201-35590220 MS.gene76164:CDS 65.0%
!! GGTGCTGCTCATCTCGGGCT+GGG + chr3.1:35590206-35590225 MS.gene76164:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 35589497 35595968 35589497 ID=MS.gene76164
chr3.1 mRNA 35589497 35595968 35589497 ID=MS.gene76164.t1;Parent=MS.gene76164
chr3.1 exon 35589497 35589566 35589497 ID=MS.gene76164.t1.exon1;Parent=MS.gene76164.t1
chr3.1 CDS 35589497 35589566 35589497 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35589916 35590085 35589916 ID=MS.gene76164.t1.exon2;Parent=MS.gene76164.t1
chr3.1 CDS 35589916 35590085 35589916 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35590191 35590262 35590191 ID=MS.gene76164.t1.exon3;Parent=MS.gene76164.t1
chr3.1 CDS 35590191 35590262 35590191 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35590848 35590998 35590848 ID=MS.gene76164.t1.exon4;Parent=MS.gene76164.t1
chr3.1 CDS 35590848 35590998 35590848 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35592403 35592573 35592403 ID=MS.gene76164.t1.exon5;Parent=MS.gene76164.t1
chr3.1 CDS 35592403 35592573 35592403 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35593437 35593545 35593437 ID=MS.gene76164.t1.exon6;Parent=MS.gene76164.t1
chr3.1 CDS 35593437 35593545 35593437 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35593639 35593756 35593639 ID=MS.gene76164.t1.exon7;Parent=MS.gene76164.t1
chr3.1 CDS 35593639 35593756 35593639 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35594245 35594392 35594245 ID=MS.gene76164.t1.exon8;Parent=MS.gene76164.t1
chr3.1 CDS 35594245 35594392 35594245 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35594651 35594899 35594651 ID=MS.gene76164.t1.exon9;Parent=MS.gene76164.t1
chr3.1 CDS 35594651 35594899 35594651 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35594999 35595124 35594999 ID=MS.gene76164.t1.exon10;Parent=MS.gene76164.t1
chr3.1 CDS 35594999 35595124 35594999 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35595197 35595297 35595197 ID=MS.gene76164.t1.exon11;Parent=MS.gene76164.t1
chr3.1 CDS 35595197 35595297 35595197 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35595444 35595518 35595444 ID=MS.gene76164.t1.exon12;Parent=MS.gene76164.t1
chr3.1 CDS 35595444 35595518 35595444 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
chr3.1 exon 35595909 35595968 35595909 ID=MS.gene76164.t1.exon13;Parent=MS.gene76164.t1
chr3.1 CDS 35595909 35595968 35595909 ID=cds.MS.gene76164.t1;Parent=MS.gene76164.t1
Gene Sequence

>MS.gene76164

ATGGCAACTGAAGAGAATAATGTCGCAAAGGCTGAAGAATTTAAAGTCCTTGCTAATGAAGCATTCAAAGGTAATTAATAATCAAACATTCAGACTGTTTTTTTTAATGATATGACGATTCATTTTCTTGTTGTAACATCACAATTGTTTTTGTCACAACTTAAATTTTAGCTGAATCGTTGAATCTGACTCAATTTGATGAGCAACACTTTCATACTTAATTGTTGGTTATAACATAATTAGAGCAAACATCATGTGATTTATTCTGAAATTTATGTCTTATGTTTCCACCTACAAATTATTGAACATGGTGGTGCTACATATAAGAAAGAGAGACTGTGAATGGTTTTTGGAATGACCTAATGCTTTAACACTTTCATTTACCAGCATTTGCTGATCCTGTGAATTCCTTTTTTCAGAACGGAAATTTGCCCATGCAATTGATCTATATACACAAGCAATTGAGCTAAATGGCCAAAATGCAGTTTACCTTGCTAATCGTGCCTTTGCTCATCTTAGGCTCGAGGAATATGGTAGTGCAATACTAGATGCTACAAAGGCTATCGAAGTTGATCCTAAATATTCAAAGGTTCTTCAACTCCTAAAACTTTAGACACTCTTCTCTGTATTTAGCTATCATTAATAATAATATTTGATTCAACCAATTATGCTTTTTTTTTTGTTGTTGTTATAGGGTTACTACAGGCGAGGTGCTGCTCATCTCGGGCTGGGAAAATTCAAGGAAGCATTGAAAGATTTTCAGCAGGTACTATATATAATTATAAATGTCTATTGTCTCAACAAGGTTGGAATAAGGAGCATGGTCTAATAATAACATGTTTGTATTAGTAATCAGTTGCAATGCGTTGTTGGAAAACATTAGTAGATCAATATTCATAGCCTTTTCATTAGGCATATAAATAATAGTGATATCAAACAGAATATCGGAGAATGTAAAATCAGTTTCTCTAAAGTAAATCATTTAGAATATTTTATAAAACATTGTTAATTTTAGTAATTTTGGAGAAACTAACAATAAATAGGTATTATTCATTGAATATATGCTCAGTAATTTTTTCTGGTCTGATATCAGTCCATAAAAAGGGTTACAGCTACCGTCAACGAAGGAAAAGAAAGAACAGAGAAAAAAAGAGAGATATTGAAGGCATTGTTTTTAAAAATGTCAAGAGAGTGTGGTTGTGATGTATAAATAAAATAAAGGAAGGGAGGTTGCGAACCCTAAAAGATTAACATTCTATCATCAGGGGATTCCTTCCTTTAGATATTCTAATAAAATATAGGTTTCAAATGACCAGGTCTGATATAATATGCTTAAACTTGTATTGACCAGGTCAAGAAAATGTGTCCAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCTGTTATGAAACTGAAATTTGAAGAAGCTATTTCTGTACCAGGATCGGTGAAGCGTCCAATAGCTGAATCCATAGATTTCCGTTCAATAGGTACTATTTTGAATATGTTATGCTAATATTTCGTTTTATCATTTTTTTTCCTTTCTAAATCTCCCTCCCCCTGTGGGCAATTTTTTGTTGTGTTTGATTATCTCATGATTCAGTCATGCCATGTTATAACTTTTTGTATGTTTTGGATCTGTGCTTCAATATTGAAAACTTCAAATAGCACGCCATATAGGAGTAACTGTAGATTTTTAATTGTTTGAATTTTGACAGTTTGGTACTAGGTCTACAGTTACGCATATCTTTGGACCTTGAGTTGGTGTTATTTCATATATTGATGCATGTTTTCAAGGATCCTGATATCATTGATGTGAAAAATGAAGTAGTTATGTTTATTGTCATTTTTCAATAATAAAGTTATGGATGTGACTTTTGTTTTTTGATTAGATTATTTGACATGTCTCCTCATATAATTGTACTGCCGATGCGATTTCCTTCTTTGATCACTATTCATTTTTACGGGAATGATTCGATGGAGTAATGTCAATTAATGTTTAGTTTCAATTTATAGTTTTATTCGTTTGCATGCCTTTTGGCAAAATTTGAATAGGCTATGGATATATATTCTTTGATTAAGTAGTAGTGATGATAGTGGTCTGAGTAAGAATGAGAACAGGTTAATGACCATTTTACTATGAACTTTGGAATTTGTAACTTCCTAAGTTCTTGGCTGCGTATGTAAATCCTTGAAATCATGCGTTTTCAATCATCTTCAGAAAGATATGAAATATGAGGTTGATGGAGAAGGAAGAAGGGCAAAGTGGAGGAATATGCTCTCAGCTTGAAAATAAATGAATACTAAAACATCAAGTTATTGCAACCATCCTATGCTTAAACTTTAATCTACAACCAAAGTAACCACGGCATAGAAAACTTCTGTCATCACGAACTTATAAGTAAATTATTGATTGAATTAACTTGATACTTGGTTGACCAATATGTGAACTAAAATGGAACACACTAACAAATGGATAATTTTTTGTCTCCTTCACCTGTAGACTTCAGCTTTGTGGCCTTGTGTTTCTTTCTCTTACCTTCCTTTTAATTGGTTGTTTACATTTTCAAAGGCAGAAAATTTAAAAAATAAAATAATTATTAGGATATTTACCAGTAGTTTTGAGTCTTGTGTTTGAAGAACATGCTTTACAAGTATAAAATCTATAAAATGATCACTTTACCCATCTTTTTATCACCTATTTGTTGATATATAGGTTTTTTTTCCCTCCAAGTCAATAGTAGTCCCCTCATGTTCCATGACATACCCTAATCATCCGTTATTTTCCTCACAAACCTTTCCACAAGTACTAGAGTGTAGAGACATTTTTATGCTTGTTGGTTTTTAGATGTTTGCATACTTCACTATAAATTATCACTCTTGTATCATTATAGGAAAGCGCCGCAATTCTTCGGTGCCAACCGAAGTTGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGTGGTGGTCATGTTGGTCAAGACATCAAAGACCACAATAGTAGCTACAATTGTGGTTGGTCTGCTGTTGGTCCTTGGGGCATGGTGGAGTAGCTGCTATACTGGTACATTTAGGAGTCATTTACAAGACCTAGGTATAACCTTATCTAACAAGACATAAAACCAATTAATCATAGGACGGTAGATCCTAATTCATTTGAGATTTTTGAAACAAGTCAAGTGGAATCATTATCAGTACTGCATTAGGAAATAAACCGTTCTAATGCAACACATTTCTTTATATTGGTTTTTTAGATCAAGTTAATCCCTATTCTGCCTAAGAAATGAAAGGCCATGTCGTGTGTCTTAGATATTAGTTCATTAGAATGTGTTTATTACCCTTCTTAGGCGTTCTGAAACTAAATAGGATGATGCCTTTGGACATACTGCTGTGTTTCAAATTTTAGTATGTTTTCAAATTCTACTAATAAGGATAGTGGATACTATGTACTTTTCAGTTTACTTGTAGGAATATATTTTATCTAAAACTGAAAGAGGAAAGAGCATAAACCATCTACGCATTCTGTAAACAAATAAAGAAAATATATATGTTGTGTGTATTTCGTATTATTTTCAGCTGCTTGCAAACTTGTTTGAATTTTTTCTTGTGATTTTCAATTACTGCCTGGATTGGCATCTAAAAACTATGGCTGCCTATTTTGAAGATTGTTGCGTATGTATTTTTTATAGATGTATTCGGATTTAACAGGGATTCAAATTGTAATTTATCTGTTCTTTAACGCCTCTTTAGTATTAACGGTTTTCGGGACCAATAAACATACCTGTTAATTTTACGTTGTCAGTGGTCCTTAATATTCATAACCTTTTTTTTTTGTATATTTTGTTATTAAGTTAATTTTGTGTTCCCTTGTAGCATTTGATTTCACTCGCTGACATGAAAATATTTGTTTTTTTATTTCGATAATAGATGTCGAGCCACAGTATTCAGGAGCAAGAATAGAAGGGGATACTATTACTTTGGATTTCGTAAAGAAAATGATGGATGATTTCAAGAAACAGAAGTGCTTGCATAAACGGTACTGAACGAAGAATTTTTGTTGTATAACTGTTTCTACTTTCTTGAAGTGTTATTGAAGTGTATTTGCATTTGTCCTGGTTCATTGTTTTAGGTATGCATTCCAGATTGTGTTGCAAACAAAAGAGATGTTGCAAGCTTTGCCTTCTCTTGTCGACATAACTGTTCCTCATGGAAAACATTTTACTGTTTGTGGCGATGTGCATGGTCAGGTAATTGGTTTATTATATGGTAAAACAAATTGTTGCTAATATCTTAAAGGTGGCTTTTTGTTACATAAATATTTAAAGAATAGAGTTGTTCTCACATCATCTTTGATTTTTCAAAACATTCTTCATAAAGTGAATTTATTTGACCATTATGTGGCGGGACTGGGGAGCTTTTTTTTTTTGTTAATGAGCTTGTTAGTTAATATTTTATATGTGCCTCATTTGTACGAAGGATTTAAATTCCGTGTTGAATTTATATTTTAAATCCATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATGTTGCTTGACTTTTGTGATATATTTATTTTCTTTAATTATCAACCCTTTCAATTTTATTTTTCATGACTCCTGCAGTTCTATGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGGTAAACCCTAGCTCTTTCTTTATTAGCCTGTTAGGTTTCATTATACTATTTTTGATACATCATGGATTCTTTAGTTATTATTATTTCATAACACCTGATTAGATGCTTAATGTATTGCTTCATTTTTTTTCAATTGAATTGTATAACCAATAATGTTTATTGTGTGATTTGATTTTTCGTAAATATTTTGTATGCTTTTTTCAATTCACTCAGTTAGCTGGGATGTTGTAACTTGTTTTGTTTCCATATTATTTTCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGAAACATTTGTTGAACTATTTGCGGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGATAAAGTTTTCGTAGTCCATGGGGGTCTTTTCAGTGTTGATGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGTATAGATGCACCGTTTTTTTCTTCAATTGATCTCACAGTTAACACAATCTTCCATTTCATCGTAGTTTTGTTAATGTATATATGTTCGGTATGCGTAGGGTTGATGTGTGAGTTGCTATGGAGTGATCCACAACCTCTCCCTGGAAGAGGACCTAGCAAGCGTGGTGTAGGCCTTTCTTTCGGTGGTGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGGTATGTTTTCCACTGGTCTGATATTTAATTTCTTATTTCATCAGTGACTTCATATGAATTATCACTTTACAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGGTAACCATATCCCTTTTGTTACAACCTTCTTTCTTGAATACTTTTATGGTGACCGTGCCACACACTTCTTATATTAATGTATTTAAGCAATCACTTATCTTCCTATGAAGGTAATCTATATACTGATTTTTCATTGTTTTCTGTAGATGGGTAACAAAGGTGCCTTTATTCGTTTTGAAGCGCCTGATTTGAAACCAAACATTACTACATTTGCAGCAGTGGTTAGTATCTTTCTTCTTTTGAAGTCTGTCATGCTATATCATGTATTGTCGTTTTAATAAAAAATGAAAATGGAAAAGAATCATGTAGTCAAATACTGGCCATGGAAACACCATGGCTAATTGCAGTGGCAGATATTTCACATCTGTCACATGGCCAATTTGTGAATGATGGTGGCACCATGGTGTTCTATGGCAGCTTAAAATGTTGAATTTTGGGCTTTTCGCCCTCGTTTGTCATCTGTAATCGATAACACGCTGTAACTCTTCATTTTATGCAACAATCAATTTGTTGCAATGTGATTATATTATACATATCTTCATTCAATTTGTGAGGTTATGTGGTGCTGACATACTTTCTTATTGGTTTGGTTCACTTTGTTGAATTTGCAGCCACACCCTGATGTCAAGCCAATGGCTTATGCAAACAACTTCCTCAGAATGTTCTCATAA
Protein sequence

>MS.gene76164.t1

MATEENNVAKAEEFKVLANEAFKERKFAHAIDLYTQAIELNGQNAVYLANRAFAHLRLEEYGSAILDATKAIEVDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISVPGSVKRPIAESIDFRSIGKRRNSSVPTEVAIAAVTVAVMAVVVMLVKTSKTTIVATIVVGLLLVLGAWWSSCYTDVEPQYSGARIEGDTITLDFVKKMMDDFKKQKCLHKRYAFQIVLQTKEMLQALPSLVDITVPHGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINDKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS