Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76221.t1 | XP_013470285.1 | 95 | 382 | 15 | 1 | 1 | 378 | 1 | 382 | 8.40E-222 | 779.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76221.t1 | Q940H3 | 64.9 | 348 | 114 | 4 | 33 | 376 | 29 | 372 | 2.8e-141 | 503.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76221.t1 | A0A072VSC4 | 95.0 | 382 | 15 | 1 | 1 | 378 | 1 | 382 | 6.1e-222 | 779.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050521 | MS.gene76221 | 0.809904 | 1.50E-50 | -1.69E-46 |
| MS.gene052143 | MS.gene76221 | 0.809614 | 1.73E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene76221 | 0.823191 | 1.58E-53 | -1.69E-46 |
| MS.gene060076 | MS.gene76221 | 0.827243 | 1.74E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027587 | MS.gene76221 | PPI |
| MS.gene027586 | MS.gene76221 | PPI |
| MS.gene82618 | MS.gene76221 | PPI |
| MS.gene22010 | MS.gene76221 | PPI |
| MS.gene070181 | MS.gene76221 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76221.t1 | MTR_1g112210 | 95.026 | 382 | 15 | 1 | 1 | 378 | 1 | 382 | 0.0 | 764 |
| MS.gene76221.t1 | MTR_1g112210 | 92.778 | 360 | 13 | 1 | 19 | 378 | 23 | 369 | 0.0 | 701 |
| MS.gene76221.t1 | MTR_1g050448 | 73.351 | 379 | 96 | 3 | 1 | 378 | 1 | 375 | 0.0 | 602 |
| MS.gene76221.t1 | MTR_3g464570 | 42.216 | 334 | 175 | 5 | 55 | 374 | 43 | 372 | 6.99e-99 | 298 |
| MS.gene76221.t1 | MTR_5g071350 | 40.233 | 343 | 181 | 5 | 53 | 374 | 56 | 395 | 1.56e-98 | 298 |
| MS.gene76221.t1 | MTR_2g015720 | 42.296 | 331 | 170 | 6 | 55 | 378 | 42 | 358 | 1.81e-95 | 289 |
| MS.gene76221.t1 | MTR_4g016940 | 42.075 | 347 | 177 | 8 | 53 | 378 | 84 | 427 | 1.76e-92 | 284 |
| MS.gene76221.t1 | MTR_3g049330 | 42.216 | 334 | 169 | 7 | 55 | 378 | 31 | 350 | 4.33e-92 | 280 |
| MS.gene76221.t1 | MTR_2g091175 | 39.458 | 332 | 180 | 6 | 54 | 378 | 49 | 366 | 1.49e-91 | 280 |
| MS.gene76221.t1 | MTR_7g093450 | 38.947 | 380 | 208 | 8 | 19 | 378 | 212 | 587 | 1.39e-89 | 281 |
| MS.gene76221.t1 | MTR_2g073500 | 42.687 | 335 | 167 | 8 | 53 | 378 | 27 | 345 | 3.05e-89 | 273 |
| MS.gene76221.t1 | MTR_0136s0010 | 41.210 | 347 | 184 | 7 | 50 | 378 | 165 | 509 | 4.87e-88 | 275 |
| MS.gene76221.t1 | MTR_2g073510 | 39.339 | 333 | 181 | 6 | 51 | 374 | 29 | 349 | 2.53e-87 | 268 |
| MS.gene76221.t1 | MTR_5g034810 | 40.719 | 334 | 176 | 7 | 53 | 378 | 33 | 352 | 1.21e-86 | 266 |
| MS.gene76221.t1 | MTR_5g033800 | 36.842 | 380 | 216 | 10 | 15 | 378 | 112 | 483 | 4.55e-85 | 267 |
| MS.gene76221.t1 | MTR_7g109550 | 37.015 | 335 | 188 | 5 | 55 | 374 | 137 | 463 | 7.96e-85 | 265 |
| MS.gene76221.t1 | MTR_4g079700 | 37.725 | 334 | 181 | 8 | 55 | 378 | 47 | 363 | 9.07e-85 | 262 |
| MS.gene76221.t1 | MTR_7g068920 | 40.058 | 347 | 184 | 8 | 53 | 378 | 78 | 421 | 1.25e-84 | 263 |
| MS.gene76221.t1 | MTR_5g059400 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 2.83e-84 | 266 |
| MS.gene76221.t1 | MTR_1g116130 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 2.83e-84 | 266 |
| MS.gene76221.t1 | MTR_3g070900 | 40.517 | 348 | 171 | 10 | 55 | 374 | 106 | 445 | 8.12e-83 | 259 |
| MS.gene76221.t1 | MTR_8g463790 | 39.595 | 346 | 180 | 10 | 55 | 378 | 71 | 409 | 2.12e-82 | 258 |
| MS.gene76221.t1 | MTR_4g087730 | 37.234 | 376 | 206 | 10 | 12 | 378 | 8 | 362 | 2.47e-82 | 256 |
| MS.gene76221.t1 | MTR_4g088030 | 35.756 | 344 | 201 | 6 | 42 | 378 | 20 | 350 | 6.36e-82 | 254 |
| MS.gene76221.t1 | MTR_4g014440 | 35.294 | 391 | 223 | 11 | 10 | 378 | 25 | 407 | 1.68e-81 | 255 |
| MS.gene76221.t1 | MTR_4g126950 | 34.896 | 384 | 220 | 8 | 21 | 378 | 67 | 446 | 5.42e-81 | 255 |
| MS.gene76221.t1 | MTR_5g082880 | 40.227 | 353 | 172 | 11 | 53 | 374 | 163 | 507 | 8.50e-80 | 254 |
| MS.gene76221.t1 | MTR_3g021090 | 35.127 | 353 | 206 | 7 | 30 | 374 | 7 | 344 | 9.70e-79 | 248 |
| MS.gene76221.t1 | MTR_3g035830 | 35.211 | 355 | 207 | 7 | 30 | 376 | 7 | 346 | 1.48e-78 | 245 |
| MS.gene76221.t1 | MTR_3g071650 | 35.969 | 392 | 222 | 10 | 14 | 378 | 41 | 430 | 4.26e-78 | 247 |
| MS.gene76221.t1 | MTR_1g111010 | 40.361 | 332 | 172 | 12 | 53 | 378 | 30 | 341 | 5.71e-78 | 244 |
| MS.gene76221.t1 | MTR_4g121560 | 36.413 | 368 | 209 | 8 | 31 | 378 | 91 | 453 | 9.70e-78 | 247 |
| MS.gene76221.t1 | MTR_3g021060 | 34.473 | 351 | 197 | 7 | 34 | 376 | 36 | 361 | 4.84e-76 | 239 |
| MS.gene76221.t1 | MTR_5g083260 | 37.971 | 345 | 190 | 9 | 55 | 378 | 83 | 424 | 7.17e-76 | 241 |
| MS.gene76221.t1 | MTR_8g069790 | 35.988 | 339 | 200 | 7 | 52 | 374 | 175 | 512 | 3.44e-75 | 242 |
| MS.gene76221.t1 | MTR_3g464570 | 41.111 | 270 | 142 | 4 | 118 | 374 | 3 | 268 | 6.89e-74 | 231 |
| MS.gene76221.t1 | MTR_7g070060 | 34.870 | 347 | 204 | 9 | 54 | 378 | 63 | 409 | 9.53e-74 | 235 |
| MS.gene76221.t1 | MTR_4g014430 | 35.244 | 349 | 207 | 7 | 47 | 378 | 100 | 446 | 8.83e-73 | 234 |
| MS.gene76221.t1 | MTR_1g058380 | 34.243 | 403 | 231 | 10 | 1 | 378 | 1 | 394 | 2.25e-71 | 229 |
| MS.gene76221.t1 | MTR_7g094750 | 35.260 | 346 | 198 | 8 | 55 | 378 | 91 | 432 | 4.77e-67 | 219 |
| MS.gene76221.t1 | MTR_2g022560 | 34.232 | 371 | 206 | 9 | 32 | 376 | 77 | 435 | 9.39e-67 | 218 |
| MS.gene76221.t1 | MTR_3g090120 | 35.638 | 376 | 204 | 9 | 25 | 378 | 100 | 459 | 2.18e-63 | 210 |
| MS.gene76221.t1 | MTR_8g093530 | 33.724 | 341 | 199 | 6 | 53 | 378 | 88 | 416 | 1.23e-61 | 204 |
| MS.gene76221.t1 | MTR_5g033800 | 37.262 | 263 | 148 | 6 | 28 | 279 | 124 | 380 | 8.82e-58 | 192 |
| MS.gene76221.t1 | MTR_7g070060 | 37.021 | 235 | 139 | 5 | 54 | 279 | 63 | 297 | 6.02e-54 | 181 |
| MS.gene76221.t1 | MTR_7g070060 | 31.741 | 293 | 180 | 7 | 106 | 378 | 15 | 307 | 6.59e-51 | 172 |
| MS.gene76221.t1 | MTR_7g094750 | 34.454 | 238 | 143 | 3 | 55 | 279 | 91 | 328 | 3.44e-48 | 166 |
| MS.gene76221.t1 | MTR_6g061710 | 29.459 | 370 | 215 | 12 | 40 | 374 | 152 | 510 | 2.64e-44 | 160 |
| MS.gene76221.t1 | MTR_1g076690 | 30.110 | 362 | 193 | 15 | 55 | 374 | 223 | 566 | 2.46e-40 | 150 |
| MS.gene76221.t1 | MTR_5g069320 | 30.466 | 279 | 152 | 6 | 98 | 371 | 145 | 386 | 1.88e-39 | 144 |
| MS.gene76221.t1 | MTR_8g027900 | 27.596 | 366 | 224 | 13 | 40 | 374 | 196 | 551 | 6.87e-36 | 138 |
| MS.gene76221.t1 | MTR_8g093870 | 28.451 | 355 | 208 | 15 | 53 | 376 | 131 | 470 | 8.00e-36 | 136 |
| MS.gene76221.t1 | MTR_7g019120 | 29.745 | 353 | 208 | 12 | 51 | 374 | 75 | 416 | 3.04e-35 | 134 |
| MS.gene76221.t1 | MTR_5g035090 | 27.596 | 366 | 212 | 13 | 46 | 374 | 74 | 423 | 4.49e-35 | 134 |
| MS.gene76221.t1 | MTR_7g033230 | 28.611 | 360 | 203 | 13 | 53 | 374 | 262 | 605 | 8.98e-35 | 135 |
| MS.gene76221.t1 | MTR_8g099300 | 27.020 | 396 | 246 | 14 | 11 | 374 | 31 | 415 | 9.16e-35 | 132 |
| MS.gene76221.t1 | MTR_7g033230 | 28.611 | 360 | 203 | 13 | 53 | 374 | 332 | 675 | 2.24e-34 | 134 |
| MS.gene76221.t1 | MTR_3g109840 | 28.169 | 355 | 204 | 13 | 55 | 374 | 73 | 411 | 1.50e-33 | 129 |
| MS.gene76221.t1 | MTR_8g104970 | 27.869 | 366 | 212 | 15 | 46 | 374 | 111 | 461 | 1.84e-33 | 130 |
| MS.gene76221.t1 | MTR_4g092830 | 27.920 | 351 | 214 | 11 | 55 | 375 | 48 | 389 | 5.91e-33 | 128 |
| MS.gene76221.t1 | MTR_6g007777 | 27.901 | 362 | 207 | 15 | 53 | 378 | 114 | 457 | 7.29e-33 | 128 |
| MS.gene76221.t1 | MTR_6g016880 | 25.735 | 408 | 254 | 12 | 7 | 374 | 17 | 415 | 7.82e-33 | 127 |
| MS.gene76221.t1 | MTR_5g035150 | 26.776 | 366 | 209 | 13 | 50 | 374 | 80 | 427 | 3.72e-32 | 125 |
| MS.gene76221.t1 | MTR_2g016060 | 28.652 | 356 | 196 | 13 | 59 | 374 | 59 | 396 | 1.22e-31 | 124 |
| MS.gene76221.t1 | MTR_5g035080 | 27.451 | 357 | 207 | 13 | 55 | 374 | 75 | 416 | 7.64e-31 | 122 |
| MS.gene76221.t1 | MTR_4g125060 | 27.933 | 358 | 212 | 15 | 52 | 378 | 168 | 510 | 9.29e-31 | 123 |
| MS.gene76221.t1 | MTR_4g125060 | 27.642 | 369 | 215 | 16 | 45 | 376 | 116 | 469 | 9.33e-31 | 122 |
| MS.gene76221.t1 | MTR_4g125060 | 27.933 | 358 | 212 | 15 | 52 | 378 | 197 | 539 | 1.18e-30 | 123 |
| MS.gene76221.t1 | MTR_5g035070 | 29.944 | 354 | 203 | 13 | 55 | 374 | 87 | 429 | 1.59e-30 | 121 |
| MS.gene76221.t1 | MTR_6g016875 | 27.042 | 355 | 214 | 10 | 53 | 374 | 62 | 404 | 2.60e-29 | 117 |
| MS.gene76221.t1 | MTR_6g016240 | 26.764 | 411 | 237 | 16 | 8 | 374 | 22 | 412 | 1.38e-25 | 107 |
| MS.gene76221.t1 | MTR_7g019140 | 46.875 | 96 | 50 | 1 | 51 | 145 | 75 | 170 | 1.43e-23 | 96.7 |
| MS.gene76221.t1 | MTR_5g035120 | 39.216 | 102 | 61 | 1 | 44 | 144 | 64 | 165 | 8.82e-20 | 86.3 |
| MS.gene76221.t1 | MTR_3g021150 | 33.645 | 107 | 64 | 2 | 240 | 339 | 1 | 107 | 2.34e-16 | 75.1 |
| MS.gene76221.t1 | MTR_2g022580 | 35.593 | 118 | 64 | 3 | 115 | 220 | 3 | 120 | 1.47e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76221.t1 | AT3G54260 | 61.478 | 379 | 132 | 6 | 2 | 376 | 4 | 372 | 1.30e-172 | 486 |
| MS.gene76221.t1 | AT5G58600 | 40.237 | 338 | 185 | 6 | 55 | 378 | 66 | 400 | 1.11e-92 | 283 |
| MS.gene76221.t1 | AT2G31110 | 38.462 | 364 | 198 | 7 | 21 | 374 | 11 | 358 | 6.88e-92 | 280 |
| MS.gene76221.t1 | AT1G29050 | 41.088 | 331 | 175 | 5 | 55 | 378 | 61 | 378 | 1.59e-91 | 280 |
| MS.gene76221.t1 | AT2G30900 | 40.841 | 333 | 174 | 8 | 53 | 374 | 41 | 361 | 1.45e-89 | 274 |
| MS.gene76221.t1 | AT2G34070 | 39.823 | 339 | 181 | 7 | 49 | 378 | 59 | 383 | 1.47e-89 | 275 |
| MS.gene76221.t1 | AT5G01360 | 38.329 | 347 | 191 | 8 | 53 | 378 | 34 | 378 | 5.04e-86 | 266 |
| MS.gene76221.t1 | AT3G62390 | 38.576 | 337 | 187 | 6 | 53 | 374 | 136 | 467 | 2.08e-85 | 267 |
| MS.gene76221.t1 | AT5G01360 | 38.329 | 347 | 191 | 8 | 53 | 378 | 90 | 434 | 2.25e-85 | 266 |
| MS.gene76221.t1 | AT2G30010 | 40.058 | 347 | 179 | 8 | 55 | 378 | 56 | 396 | 3.30e-85 | 264 |
| MS.gene76221.t1 | AT5G06700 | 37.978 | 366 | 202 | 7 | 37 | 378 | 230 | 594 | 4.62e-85 | 270 |
| MS.gene76221.t1 | AT2G30010 | 40.058 | 347 | 179 | 8 | 55 | 378 | 99 | 439 | 5.90e-85 | 265 |
| MS.gene76221.t1 | AT2G42570 | 38.507 | 335 | 180 | 7 | 54 | 378 | 46 | 364 | 1.53e-83 | 259 |
| MS.gene76221.t1 | AT1G78710 | 38.298 | 329 | 182 | 7 | 54 | 374 | 37 | 352 | 1.82e-83 | 258 |
| MS.gene76221.t1 | AT1G73140 | 38.728 | 346 | 187 | 8 | 53 | 378 | 65 | 405 | 3.77e-83 | 259 |
| MS.gene76221.t1 | AT3G12060 | 39.080 | 348 | 190 | 8 | 50 | 378 | 191 | 535 | 8.30e-83 | 263 |
| MS.gene76221.t1 | AT3G55990 | 37.669 | 369 | 200 | 9 | 28 | 374 | 119 | 479 | 5.72e-82 | 259 |
| MS.gene76221.t1 | AT2G40150 | 38.636 | 352 | 180 | 9 | 54 | 374 | 70 | 416 | 2.57e-81 | 255 |
| MS.gene76221.t1 | AT5G20590 | 38.663 | 344 | 190 | 8 | 53 | 378 | 139 | 479 | 5.43e-81 | 256 |
| MS.gene76221.t1 | AT5G49340 | 37.571 | 354 | 199 | 8 | 45 | 378 | 90 | 441 | 3.96e-80 | 253 |
| MS.gene76221.t1 | AT1G60790 | 36.416 | 346 | 199 | 9 | 49 | 374 | 184 | 528 | 2.99e-79 | 253 |
| MS.gene76221.t1 | AT3G14850 | 37.273 | 330 | 184 | 7 | 55 | 374 | 34 | 350 | 4.87e-79 | 247 |
| MS.gene76221.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 108 | 449 | 1.07e-78 | 249 |
| MS.gene76221.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 108 | 449 | 1.07e-78 | 249 |
| MS.gene76221.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 116 | 457 | 1.09e-78 | 249 |
| MS.gene76221.t1 | AT2G40160 | 37.176 | 347 | 195 | 9 | 55 | 378 | 77 | 423 | 3.65e-78 | 247 |
| MS.gene76221.t1 | AT2G40160 | 36.888 | 347 | 196 | 9 | 55 | 378 | 77 | 423 | 4.59e-78 | 247 |
| MS.gene76221.t1 | AT3G11030 | 37.609 | 343 | 195 | 7 | 55 | 378 | 106 | 448 | 1.45e-76 | 244 |
| MS.gene76221.t1 | AT2G38320 | 32.161 | 398 | 243 | 10 | 3 | 378 | 12 | 404 | 1.43e-74 | 237 |
| MS.gene76221.t1 | AT2G40320 | 34.343 | 396 | 235 | 9 | 8 | 378 | 27 | 422 | 9.25e-74 | 236 |
| MS.gene76221.t1 | AT1G48880 | 35.345 | 348 | 180 | 8 | 54 | 378 | 114 | 439 | 1.29e-67 | 220 |
| MS.gene76221.t1 | AT5G19160 | 34.133 | 375 | 209 | 9 | 33 | 376 | 75 | 442 | 1.75e-66 | 218 |
| MS.gene76221.t1 | AT2G31110 | 38.583 | 254 | 153 | 3 | 20 | 272 | 10 | 261 | 1.80e-66 | 212 |
| MS.gene76221.t1 | AT5G58600 | 41.410 | 227 | 130 | 3 | 55 | 279 | 66 | 291 | 3.54e-65 | 209 |
| MS.gene76221.t1 | AT3G62390 | 41.176 | 238 | 129 | 3 | 53 | 279 | 136 | 373 | 4.25e-65 | 213 |
| MS.gene76221.t1 | AT3G06080 | 35.028 | 354 | 195 | 9 | 50 | 376 | 98 | 443 | 8.76e-65 | 213 |
| MS.gene76221.t1 | AT2G38320 | 33.645 | 321 | 193 | 7 | 78 | 378 | 1 | 321 | 1.12e-64 | 209 |
| MS.gene76221.t1 | AT2G30900 | 42.609 | 230 | 127 | 5 | 53 | 279 | 41 | 268 | 1.55e-64 | 207 |
| MS.gene76221.t1 | AT5G06230 | 34.561 | 353 | 197 | 8 | 53 | 378 | 19 | 364 | 1.24e-62 | 205 |
| MS.gene76221.t1 | AT2G34070 | 38.783 | 263 | 139 | 6 | 124 | 378 | 1 | 249 | 2.86e-62 | 200 |
| MS.gene76221.t1 | AT5G06230 | 34.561 | 353 | 197 | 8 | 53 | 378 | 60 | 405 | 3.16e-62 | 205 |
| MS.gene76221.t1 | AT3G11570 | 32.071 | 396 | 230 | 11 | 8 | 378 | 38 | 419 | 5.10e-61 | 202 |
| MS.gene76221.t1 | AT2G40160 | 39.407 | 236 | 132 | 6 | 55 | 279 | 77 | 312 | 1.24e-56 | 188 |
| MS.gene76221.t1 | AT1G78710 | 31.549 | 355 | 176 | 10 | 30 | 378 | 3 | 296 | 9.18e-56 | 185 |
| MS.gene76221.t1 | AT5G20590 | 38.750 | 240 | 134 | 5 | 53 | 279 | 139 | 378 | 6.84e-54 | 182 |
| MS.gene76221.t1 | AT5G19160 | 37.037 | 243 | 140 | 4 | 50 | 279 | 94 | 336 | 1.83e-50 | 173 |
| MS.gene76221.t1 | AT3G14850 | 35.000 | 260 | 147 | 6 | 124 | 374 | 1 | 247 | 8.61e-50 | 168 |
| MS.gene76221.t1 | AT3G06080 | 35.802 | 243 | 143 | 4 | 50 | 279 | 98 | 340 | 1.21e-48 | 168 |
| MS.gene76221.t1 | AT2G31110 | 39.908 | 218 | 106 | 6 | 166 | 374 | 9 | 210 | 2.35e-48 | 163 |
| MS.gene76221.t1 | AT5G06230 | 34.959 | 246 | 141 | 4 | 53 | 279 | 60 | 305 | 1.38e-45 | 159 |
| MS.gene76221.t1 | AT1G70230 | 30.447 | 358 | 190 | 14 | 55 | 378 | 79 | 411 | 1.36e-40 | 148 |
| MS.gene76221.t1 | AT4G25360 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 2.88e-39 | 147 |
| MS.gene76221.t1 | AT4G25360 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 2.88e-39 | 147 |
| MS.gene76221.t1 | AT5G51640 | 28.912 | 377 | 223 | 13 | 31 | 374 | 120 | 484 | 1.54e-38 | 144 |
| MS.gene76221.t1 | AT1G01430 | 26.216 | 370 | 237 | 12 | 35 | 374 | 80 | 443 | 3.23e-38 | 142 |
| MS.gene76221.t1 | AT5G64020 | 27.606 | 355 | 219 | 15 | 55 | 376 | 57 | 406 | 4.30e-37 | 139 |
| MS.gene76221.t1 | AT4G01080 | 28.693 | 352 | 211 | 12 | 51 | 374 | 87 | 426 | 5.78e-37 | 139 |
| MS.gene76221.t1 | AT3G28150 | 28.713 | 404 | 215 | 18 | 12 | 376 | 39 | 408 | 1.87e-34 | 132 |
| MS.gene76221.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 90 | 457 | 2.03e-34 | 132 |
| MS.gene76221.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
| MS.gene76221.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
| MS.gene76221.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
| MS.gene76221.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
| MS.gene76221.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 166 | 533 | 5.06e-34 | 132 |
| MS.gene76221.t1 | AT2G37720 | 28.125 | 352 | 217 | 15 | 53 | 378 | 141 | 482 | 9.30e-34 | 131 |
| MS.gene76221.t1 | AT5G15890 | 27.841 | 352 | 214 | 10 | 49 | 374 | 181 | 518 | 2.17e-33 | 130 |
| MS.gene76221.t1 | AT5G15900 | 31.378 | 392 | 202 | 16 | 26 | 378 | 46 | 409 | 2.49e-33 | 129 |
| MS.gene76221.t1 | AT5G15900 | 30.280 | 393 | 205 | 17 | 26 | 378 | 65 | 428 | 3.49e-33 | 129 |
| MS.gene76221.t1 | AT4G11090 | 28.261 | 414 | 244 | 18 | 1 | 374 | 21 | 421 | 2.43e-32 | 126 |
| MS.gene76221.t1 | AT5G64470 | 26.377 | 345 | 222 | 10 | 55 | 375 | 55 | 391 | 2.14e-31 | 123 |
| MS.gene76221.t1 | AT5G64470 | 26.211 | 351 | 221 | 11 | 55 | 375 | 55 | 397 | 5.50e-31 | 122 |
| MS.gene76221.t1 | AT2G14530 | 26.741 | 359 | 214 | 10 | 55 | 378 | 62 | 406 | 6.67e-31 | 122 |
| MS.gene76221.t1 | AT4G23790 | 27.424 | 361 | 209 | 14 | 53 | 374 | 77 | 423 | 1.82e-30 | 121 |
| MS.gene76221.t1 | AT3G02440 | 28.286 | 350 | 209 | 11 | 55 | 374 | 127 | 464 | 2.62e-29 | 118 |
| MS.gene76221.t1 | AT3G02440 | 28.286 | 350 | 209 | 11 | 55 | 374 | 135 | 472 | 2.72e-29 | 118 |
| MS.gene76221.t1 | AT5G64470 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.25e-21 | 93.6 |
| MS.gene76221.t1 | AT5G64470 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.79e-21 | 93.6 |
Find 94 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTGGTGTGCCTGATATT+TGG | 0.189016 | 1.1:-79283462 | MS.gene76221:CDS |
| GTGATTTCTCAGTTGGAAAA+TGG | 0.208372 | 1.1:-79284878 | MS.gene76221:CDS |
| AGACATCAATTGAGTTCTTC+TGG | 0.226253 | 1.1:-79284242 | MS.gene76221:CDS |
| ATTTCTTCCATGAATCTCTT+TGG | 0.226552 | 1.1:+79284901 | None:intergenic |
| GCTCATTGGTGGACTCATTC+TGG | 0.278727 | 1.1:-79284102 | MS.gene76221:CDS |
| TGATTAAATTGTAGGCAAAA+TGG | 0.281278 | 1.1:-79283727 | MS.gene76221:intron |
| AAAGTGGGTGGATTTGAATT+TGG | 0.291594 | 1.1:-79283879 | MS.gene76221:CDS |
| TTTCTTCCATGAATCTCTTT+GGG | 0.298282 | 1.1:+79284902 | None:intergenic |
| AGCATTTCGTTCCAAATATC+AGG | 0.327867 | 1.1:+79283451 | None:intergenic |
| TTCAGCCACATGCATGTTCC+AGG | 0.356693 | 1.1:-79283667 | MS.gene76221:CDS |
| GTAATATCCTGTAGATATAC+TGG | 0.367331 | 1.1:+79283601 | None:intergenic |
| GGACCAGTAGTAGTGCTAAA+AGG | 0.371991 | 1.1:-79283646 | MS.gene76221:CDS |
| TAATAAGAGAATTCTACATT+TGG | 0.381121 | 1.1:-79284184 | MS.gene76221:CDS |
| TTGAAGAGAATGCAAGGTAT+TGG | 0.381566 | 1.1:-79284155 | MS.gene76221:CDS |
| ATAGCATGGAAAGACATTAA+AGG | 0.392314 | 1.1:+79284350 | None:intergenic |
| TTCTTCCAATGCAAGCCAAC+TGG | 0.394214 | 1.1:+79284950 | None:intergenic |
| TGCAGCCATTGGTGCCTCCC+TGG | 0.399442 | 1.1:-79283478 | MS.gene76221:CDS |
| TTTAATGTCTTTCCATGCTA+TGG | 0.404785 | 1.1:-79284348 | MS.gene76221:intron |
| TTGCATTTGATTCAGCTCAT+TGG | 0.406976 | 1.1:-79284116 | MS.gene76221:CDS |
| TATTCCAACTGACAGGAAAA+AGG | 0.407152 | 1.1:-79284387 | MS.gene76221:CDS |
| TTCTTCAGTTCTACCAATAG+TGG | 0.407885 | 1.1:+79284216 | None:intergenic |
| TGTATTGAGTCCTTTCTCAT+AGG | 0.414458 | 1.1:+79283907 | None:intergenic |
| GTTCTTCTGGGCACCACTAT+TGG | 0.416633 | 1.1:-79284229 | MS.gene76221:CDS |
| CATTTGATTCAGCTCATTGG+TGG | 0.419213 | 1.1:-79284113 | MS.gene76221:CDS |
| GACATCAATTGAGTTCTTCT+GGG | 0.424420 | 1.1:-79284241 | MS.gene76221:CDS |
| AGCCAACTGGACACTTCCTC+TGG | 0.424797 | 1.1:+79284963 | None:intergenic |
| AAGAAATGTGATTTCTCAGT+TGG | 0.430768 | 1.1:-79284885 | MS.gene76221:CDS |
| TTTGATGCACTGAAGTATCT+TGG | 0.440296 | 1.1:-79284497 | MS.gene76221:CDS |
| AAATGGAAGTGGAAGCCATT+AGG | 0.444002 | 1.1:-79284756 | MS.gene76221:CDS |
| AGACATTAAAGGACCATCAT+AGG | 0.444756 | 1.1:+79284361 | None:intergenic |
| CATTTCTCATAATCTGAATC+CGG | 0.445205 | 1.1:+79284774 | None:intergenic |
| CTTGGGATGGAACAACCTAA+TGG | 0.446475 | 1.1:+79284741 | None:intergenic |
| AGTCCTCTGATTGCAGCCAT+TGG | 0.458504 | 1.1:-79283489 | MS.gene76221:CDS |
| CGGATTCAGATTATGAGAAA+TGG | 0.459664 | 1.1:-79284773 | MS.gene76221:CDS |
| TTCTATAATGAGAAACCAAT+GGG | 0.468469 | 1.1:-79284438 | MS.gene76221:CDS |
| GTATGGCACCTAGACATAAC+AGG | 0.470822 | 1.1:-79283826 | MS.gene76221:intron |
| AGTGTCCAGTTGGCTTGCAT+TGG | 0.472840 | 1.1:-79284955 | MS.gene76221:CDS |
| TTCCAAATATCAGGCACACC+AGG | 0.474779 | 1.1:+79283460 | None:intergenic |
| TGCAAACCCAAAGAGATTCA+TGG | 0.480389 | 1.1:-79284908 | MS.gene76221:CDS |
| TCTCTTGTATGCTTAGTTCA+AGG | 0.493508 | 1.1:-79284413 | MS.gene76221:CDS |
| CATCACAAACATGAATCAAA+TGG | 0.494804 | 1.1:-79283933 | MS.gene76221:CDS |
| CAAATGGTTGCCTATGAGAA+AGG | 0.503172 | 1.1:-79283917 | MS.gene76221:CDS |
| GAGATTTCCAGTATATCTAC+AGG | 0.504762 | 1.1:-79283608 | MS.gene76221:CDS |
| GCAGTAACTTGTCAAAAGAA+TGG | 0.505516 | 1.1:-79284801 | MS.gene76221:CDS |
| GTTGGAAATGTTACAATCAA+AGG | 0.507595 | 1.1:-79283705 | MS.gene76221:CDS |
| TAAATTGTAGGCAAAATGGT+TGG | 0.508760 | 1.1:-79283723 | MS.gene76221:intron |
| ATGAGAAAGGACTCAATACA+TGG | 0.509591 | 1.1:-79283904 | MS.gene76221:CDS |
| TTTAGCACTACTACTGGTCC+TGG | 0.509768 | 1.1:+79283649 | None:intergenic |
| TATTGGTAGAACTGAAGAAA+GGG | 0.514662 | 1.1:-79284212 | MS.gene76221:CDS |
| AAGGAGTTATTCCAACTGAC+AGG | 0.516555 | 1.1:-79284394 | MS.gene76221:CDS |
| TACCAGGTGGGATTATTACA+TGG | 0.524110 | 1.1:-79283969 | MS.gene76221:intron |
| GCACACCAGGGAGGCACCAA+TGG | 0.532334 | 1.1:+79283473 | None:intergenic |
| GTTACTGCAGTGGCGAGATA+AGG | 0.535012 | 1.1:+79284816 | None:intergenic |
| CAGATTATGAGAAATGGAAG+TGG | 0.537613 | 1.1:-79284767 | MS.gene76221:CDS |
| CTATTGGTAGAACTGAAGAA+AGG | 0.537856 | 1.1:-79284213 | MS.gene76221:CDS |
| ACATCCTTCAGTGTATAGTA+AGG | 0.542161 | 1.1:-79283551 | MS.gene76221:CDS |
| AGCATACAAGAGATTCCCAT+TGG | 0.544133 | 1.1:+79284423 | None:intergenic |
| GACTCAATACATGGGCAAAG+TGG | 0.544827 | 1.1:-79283895 | MS.gene76221:CDS |
| ATGACTGCATTTAGAAGAGA+TGG | 0.549263 | 1.1:-79283574 | MS.gene76221:CDS |
| GAGAGGCAGAAACAAGGTAA+TGG | 0.549704 | 1.1:-79283514 | MS.gene76221:CDS |
| ATTCTATAATGAGAAACCAA+TGG | 0.550938 | 1.1:-79284439 | MS.gene76221:CDS |
| ATTAATATCCTACCATAGCA+TGG | 0.553143 | 1.1:+79284336 | None:intergenic |
| CATTAGGTTGTTCCATCCCA+AGG | 0.558505 | 1.1:-79284740 | MS.gene76221:intron |
| AGGTAATAAGTGAAGAAGAG+AGG | 0.559968 | 1.1:-79283531 | MS.gene76221:CDS |
| GACAGTTGGAATCATAGAGA+GGG | 0.562013 | 1.1:+79284838 | None:intergenic |
| AGTACGTACCTGTTATGTCT+AGG | 0.567486 | 1.1:+79283818 | None:intergenic |
| GCACCAATGGCTGCAATCAG+AGG | 0.571338 | 1.1:+79283486 | None:intergenic |
| GTTTCATCATCACCTTGGGA+TGG | 0.572029 | 1.1:+79284728 | None:intergenic |
| TTGTCAAAAGAATGGACGGC+CGG | 0.574038 | 1.1:-79284793 | MS.gene76221:CDS |
| ACTCAATACATGGGCAAAGT+GGG | 0.582566 | 1.1:-79283894 | MS.gene76221:CDS |
| GAGAGGAAAGAGAATGATGT+TGG | 0.587409 | 1.1:-79284468 | MS.gene76221:CDS |
| AATGGCTGCAATCAGAGGAC+TGG | 0.587580 | 1.1:+79283491 | None:intergenic |
| GAGAATGCAAGGTATTGGAA+AGG | 0.589108 | 1.1:-79284150 | MS.gene76221:CDS |
| ATCCAGAGGAAGTGTCCAGT+TGG | 0.594248 | 1.1:-79284965 | MS.gene76221:CDS |
| ATTTGATTGAAGAGAATGCA+AGG | 0.595081 | 1.1:-79284161 | MS.gene76221:CDS |
| AAGTATCTTGGTAAAATGAG+AGG | 0.596417 | 1.1:-79284485 | MS.gene76221:CDS |
| AGGTGGGATTATTACATGGA+AGG | 0.598017 | 1.1:-79283965 | MS.gene76221:CDS |
| CAATACATGGGCAAAGTGGG+TGG | 0.598037 | 1.1:-79283891 | MS.gene76221:CDS |
| ATTACCTTACTATACACTGA+AGG | 0.598619 | 1.1:+79283547 | None:intergenic |
| GTTGGAATCATAGAGAGGGT+AGG | 0.612157 | 1.1:+79284842 | None:intergenic |
| TAACTTGTCAAAAGAATGGA+CGG | 0.614689 | 1.1:-79284797 | MS.gene76221:CDS |
| GGAACGAAATGCTGAGTGCA+TGG | 0.615044 | 1.1:-79283441 | MS.gene76221:CDS |
| GAAGAAGAGAGGCAGAAACA+AGG | 0.633633 | 1.1:-79283520 | MS.gene76221:CDS |
| GGACAGTTGGAATCATAGAG+AGG | 0.634353 | 1.1:+79284837 | None:intergenic |
| TCCAAATATCAGGCACACCA+GGG | 0.635948 | 1.1:+79283461 | None:intergenic |
| AGTGGCGAGATAAGGACAGT+TGG | 0.638580 | 1.1:+79284824 | None:intergenic |
| GGAAAGAGAATGATGTTGGT+GGG | 0.640717 | 1.1:-79284464 | MS.gene76221:CDS |
| AGGAAAGAGAATGATGTTGG+TGG | 0.644337 | 1.1:-79284465 | MS.gene76221:CDS |
| AGTAGTAGTGCTAAAAGGAG+TGG | 0.649261 | 1.1:-79283641 | MS.gene76221:CDS |
| TGAGAAAGGACTCAATACAT+GGG | 0.677756 | 1.1:-79283903 | MS.gene76221:CDS |
| CTGGTCCTGGAACATGCATG+TGG | 0.678164 | 1.1:+79283662 | None:intergenic |
| ATTATCACTGATCAATCCAG+AGG | 0.696073 | 1.1:-79284979 | MS.gene76221:CDS |
| AAATATCAGGCACACCAGGG+AGG | 0.749580 | 1.1:+79283464 | None:intergenic |
| AGAAACTGAAGATGTCAACA+TGG | 0.749769 | 1.1:-79284931 | MS.gene76221:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATAAAATATTGATGA+AGG | + | chr1.1:79284698-79284717 | None:intergenic | 15.0% |
| !! | AGAACATTTGATTAAATTGT+AGG | - | chr1.1:79284741-79284760 | MS.gene76221:CDS | 20.0% |
| !! | ATAAAAATGACAGTAAATGA+AGG | + | chr1.1:79283452-79283471 | None:intergenic | 20.0% |
| !! | TAATAAGAGAATTCTACATT+TGG | - | chr1.1:79284292-79284311 | MS.gene76221:intron | 20.0% |
| !!! | CATTTTTAGAAGGAAAATTA+AGG | + | chr1.1:79284177-79284196 | None:intergenic | 20.0% |
| !!! | GTAAGTAAATCATTTTTAGA+AGG | + | chr1.1:79284187-79284206 | None:intergenic | 20.0% |
| !!! | TAATCATTTTTACATCCTAA+TGG | - | chr1.1:79284468-79284487 | MS.gene76221:CDS | 20.0% |
| ! | AAGCATGTAAGAAAACAAAA+AGG | + | chr1.1:79283794-79283813 | None:intergenic | 25.0% |
| ! | AATCAATCTTGATTAATACC+AGG | - | chr1.1:79284491-79284510 | MS.gene76221:CDS | 25.0% |
| ! | ATTCTATAATGAGAAACCAA+TGG | - | chr1.1:79284037-79284056 | MS.gene76221:intron | 25.0% |
| ! | TGATTAAATTGTAGGCAAAA+TGG | - | chr1.1:79284749-79284768 | MS.gene76221:CDS | 25.0% |
| ! | TTCTATAATGAGAAACCAAT+GGG | - | chr1.1:79284038-79284057 | MS.gene76221:intron | 25.0% |
| !! | TAATCAAGATTGATTCCATT+AGG | + | chr1.1:79284486-79284505 | None:intergenic | 25.0% |
| !!! | CTGTCATTTTTATTCTTCTT+AGG | - | chr1.1:79283459-79283478 | MS.gene76221:CDS | 25.0% |
| AAGAAATGTGATTTCTCAGT+TGG | - | chr1.1:79283591-79283610 | MS.gene76221:CDS | 30.0% | |
| AAGTATCTTGGTAAAATGAG+AGG | - | chr1.1:79283991-79284010 | MS.gene76221:intron | 30.0% | |
| AATCTTGATTAATACCAGGT+GGG | - | chr1.1:79284495-79284514 | MS.gene76221:CDS | 30.0% | |
| ACATGTTGTTCACTTATTAC+AGG | - | chr1.1:79284205-79284224 | MS.gene76221:CDS | 30.0% | |
| AGAAGCTAAATTTATCAGCA+TGG | + | chr1.1:79283943-79283962 | None:intergenic | 30.0% | |
| ATAGCATGGAAAGACATTAA+AGG | + | chr1.1:79284129-79284148 | None:intergenic | 30.0% | |
| ATTAATATCCTACCATAGCA+TGG | + | chr1.1:79284143-79284162 | None:intergenic | 30.0% | |
| ATTACCTTACTATACACTGA+AGG | + | chr1.1:79284932-79284951 | None:intergenic | 30.0% | |
| ATTTCTTCCATGAATCTCTT+TGG | + | chr1.1:79283578-79283597 | None:intergenic | 30.0% | |
| ATTTGATTGAAGAGAATGCA+AGG | - | chr1.1:79284315-79284334 | MS.gene76221:intron | 30.0% | |
| CATCACAAACATGAATCAAA+TGG | - | chr1.1:79284543-79284562 | MS.gene76221:intron | 30.0% | |
| CATTTCTCATAATCTGAATC+CGG | + | chr1.1:79283705-79283724 | None:intergenic | 30.0% | |
| GTAATATCCTGTAGATATAC+TGG | + | chr1.1:79284878-79284897 | None:intergenic | 30.0% | |
| GTTGGAAATGTTACAATCAA+AGG | - | chr1.1:79284771-79284790 | MS.gene76221:CDS | 30.0% | |
| TAAATTGTAGGCAAAATGGT+TGG | - | chr1.1:79284753-79284772 | MS.gene76221:CDS | 30.0% | |
| TAATGTTTCATCATCACCTT+GGG | + | chr1.1:79283755-79283774 | None:intergenic | 30.0% | |
| TATTGGTAGAACTGAAGAAA+GGG | - | chr1.1:79284264-79284283 | MS.gene76221:intron | 30.0% | |
| TTAATGTTTCATCATCACCT+TGG | + | chr1.1:79283756-79283775 | None:intergenic | 30.0% | |
| TTTAATGTCTTTCCATGCTA+TGG | - | chr1.1:79284128-79284147 | MS.gene76221:CDS | 30.0% | |
| TTTCTTCCATGAATCTCTTT+GGG | + | chr1.1:79283577-79283596 | None:intergenic | 30.0% | |
| ! | ATGTGGCTGAAATATTTTAC+AGG | + | chr1.1:79284800-79284819 | None:intergenic | 30.0% |
| ! | TAACTTGTCAAAAGAATGGA+CGG | - | chr1.1:79283679-79283698 | MS.gene76221:CDS | 30.0% |
| ! | TGCAACATTTTTGACATGTA+TGG | - | chr1.1:79283818-79283837 | MS.gene76221:intron | 30.0% |
| ACATCCTTCAGTGTATAGTA+AGG | - | chr1.1:79284925-79284944 | MS.gene76221:CDS | 35.0% | |
| AGAAACTGAAGATGTCAACA+TGG | - | chr1.1:79283545-79283564 | MS.gene76221:CDS | 35.0% | |
| AGACATCAATTGAGTTCTTC+TGG | - | chr1.1:79284234-79284253 | MS.gene76221:CDS | 35.0% | |
| AGACATTAAAGGACCATCAT+AGG | + | chr1.1:79284118-79284137 | None:intergenic | 35.0% | |
| AGCATTTCGTTCCAAATATC+AGG | + | chr1.1:79285028-79285047 | None:intergenic | 35.0% | |
| AGGTAATAAGTGAAGAAGAG+AGG | - | chr1.1:79284945-79284964 | MS.gene76221:CDS | 35.0% | |
| ATGACTGCATTTAGAAGAGA+TGG | - | chr1.1:79284902-79284921 | MS.gene76221:CDS | 35.0% | |
| ATGAGAAAGGACTCAATACA+TGG | - | chr1.1:79284572-79284591 | MS.gene76221:intron | 35.0% | |
| ATTATCACTGATCAATCCAG+AGG | - | chr1.1:79283497-79283516 | MS.gene76221:CDS | 35.0% | |
| CAATCTTGATTAATACCAGG+TGG | - | chr1.1:79284494-79284513 | MS.gene76221:CDS | 35.0% | |
| CAGATTATGAGAAATGGAAG+TGG | - | chr1.1:79283709-79283728 | MS.gene76221:CDS | 35.0% | |
| CGGATTCAGATTATGAGAAA+TGG | - | chr1.1:79283703-79283722 | MS.gene76221:CDS | 35.0% | |
| CTATTGGTAGAACTGAAGAA+AGG | - | chr1.1:79284263-79284282 | MS.gene76221:intron | 35.0% | |
| GACATCAATTGAGTTCTTCT+GGG | - | chr1.1:79284235-79284254 | MS.gene76221:CDS | 35.0% | |
| GAGATTTCCAGTATATCTAC+AGG | - | chr1.1:79284868-79284887 | MS.gene76221:CDS | 35.0% | |
| GTGATTTCTCAGTTGGAAAA+TGG | - | chr1.1:79283598-79283617 | MS.gene76221:CDS | 35.0% | |
| TATTCCAACTGACAGGAAAA+AGG | - | chr1.1:79284089-79284108 | MS.gene76221:intron | 35.0% | |
| TCTCTTGTATGCTTAGTTCA+AGG | - | chr1.1:79284063-79284082 | MS.gene76221:intron | 35.0% | |
| TGAGAAAGGACTCAATACAT+GGG | - | chr1.1:79284573-79284592 | MS.gene76221:intron | 35.0% | |
| TGTATTGAGTCCTTTCTCAT+AGG | + | chr1.1:79284572-79284591 | None:intergenic | 35.0% | |
| TTCTTCAGTTCTACCAATAG+TGG | + | chr1.1:79284263-79284282 | None:intergenic | 35.0% | |
| TTGAAGAGAATGCAAGGTAT+TGG | - | chr1.1:79284321-79284340 | MS.gene76221:intron | 35.0% | |
| TTGCATTTGATTCAGCTCAT+TGG | - | chr1.1:79284360-79284379 | MS.gene76221:CDS | 35.0% | |
| ! | AAAGTGGGTGGATTTGAATT+TGG | - | chr1.1:79284597-79284616 | MS.gene76221:intron | 35.0% |
| ! | CATACTTCTAAAAACGACTC+GGG | + | chr1.1:79284635-79284654 | None:intergenic | 35.0% |
| ! | CCATACTTCTAAAAACGACT+CGG | + | chr1.1:79284636-79284655 | None:intergenic | 35.0% |
| ! | GCAGTAACTTGTCAAAAGAA+TGG | - | chr1.1:79283675-79283694 | MS.gene76221:CDS | 35.0% |
| ! | TTTGATGCACTGAAGTATCT+TGG | - | chr1.1:79283979-79283998 | MS.gene76221:intron | 35.0% |
| AAATGGAAGTGGAAGCCATT+AGG | - | chr1.1:79283720-79283739 | MS.gene76221:intron | 40.0% | |
| AAGGAGTTATTCCAACTGAC+AGG | - | chr1.1:79284082-79284101 | MS.gene76221:intron | 40.0% | |
| ACTCAATACATGGGCAAAGT+GGG | - | chr1.1:79284582-79284601 | MS.gene76221:intron | 40.0% | |
| AGCATACAAGAGATTCCCAT+TGG | + | chr1.1:79284056-79284075 | None:intergenic | 40.0% | |
| AGCATGGTTTACGTGTGTTT+GGG | + | chr1.1:79283927-79283946 | None:intergenic | 40.0% | |
| AGGAAAAAGGTCACCTATGA+TGG | - | chr1.1:79284102-79284121 | MS.gene76221:CDS | 40.0% | |
| AGGAAAGAGAATGATGTTGG+TGG | - | chr1.1:79284011-79284030 | MS.gene76221:intron | 40.0% | |
| AGGTGGGATTATTACATGGA+AGG | - | chr1.1:79284511-79284530 | MS.gene76221:intron | 40.0% | |
| AGTACGTACCTGTTATGTCT+AGG | + | chr1.1:79284661-79284680 | None:intergenic | 40.0% | |
| AGTAGTAGTGCTAAAAGGAG+TGG | - | chr1.1:79284835-79284854 | MS.gene76221:CDS | 40.0% | |
| ATGTCTTTCCATGCTATGGT+AGG | - | chr1.1:79284132-79284151 | MS.gene76221:CDS | 40.0% | |
| CAAATGGTTGCCTATGAGAA+AGG | - | chr1.1:79284559-79284578 | MS.gene76221:intron | 40.0% | |
| CATTTGATTCAGCTCATTGG+TGG | - | chr1.1:79284363-79284382 | MS.gene76221:CDS | 40.0% | |
| GACAGTTGGAATCATAGAGA+GGG | + | chr1.1:79283641-79283660 | None:intergenic | 40.0% | |
| GAGAGGAAAGAGAATGATGT+TGG | - | chr1.1:79284008-79284027 | MS.gene76221:intron | 40.0% | |
| GGAAAGAGAATGATGTTGGT+GGG | - | chr1.1:79284012-79284031 | MS.gene76221:intron | 40.0% | |
| TACCAGGTGGGATTATTACA+TGG | - | chr1.1:79284507-79284526 | MS.gene76221:intron | 40.0% | |
| TGCAAACCCAAAGAGATTCA+TGG | - | chr1.1:79283568-79283587 | MS.gene76221:CDS | 40.0% | |
| TTCCATGTAATAATCCCACC+TGG | + | chr1.1:79284512-79284531 | None:intergenic | 40.0% | |
| ! | ACTCCTTTTAGCACTACTAC+TGG | + | chr1.1:79284836-79284855 | None:intergenic | 40.0% |
| ! | AGCTTCTCGATGACATTTTC+AGG | - | chr1.1:79283956-79283975 | MS.gene76221:CDS | 40.0% |
| ! | CTTTTGACAAGTTACTGCAG+TGG | + | chr1.1:79283673-79283692 | None:intergenic | 40.0% |
| !! | GAGAATGCAAGGTATTGGAA+AGG | - | chr1.1:79284326-79284345 | MS.gene76221:intron | 40.0% |
| !!! | CCGAGTCGTTTTTAGAAGTA+TGG | - | chr1.1:79284633-79284652 | MS.gene76221:intron | 40.0% |
| CAGCATGGTTTACGTGTGTT+TGG | + | chr1.1:79283928-79283947 | None:intergenic | 45.0% | |
| CTTGGGATGGAACAACCTAA+TGG | + | chr1.1:79283738-79283757 | None:intergenic | 45.0% | |
| GAAGAAGAGAGGCAGAAACA+AGG | - | chr1.1:79284956-79284975 | MS.gene76221:CDS | 45.0% | |
| GACTCAATACATGGGCAAAG+TGG | - | chr1.1:79284581-79284600 | MS.gene76221:intron | 45.0% | |
| GAGAGGCAGAAACAAGGTAA+TGG | - | chr1.1:79284962-79284981 | MS.gene76221:CDS | 45.0% | |
| GGACAGTTGGAATCATAGAG+AGG | + | chr1.1:79283642-79283661 | None:intergenic | 45.0% | |
| GGACCAGTAGTAGTGCTAAA+AGG | - | chr1.1:79284830-79284849 | MS.gene76221:CDS | 45.0% | |
| GTATGGCACCTAGACATAAC+AGG | - | chr1.1:79284650-79284669 | MS.gene76221:intron | 45.0% | |
| GTTGGAATCATAGAGAGGGT+AGG | + | chr1.1:79283637-79283656 | None:intergenic | 45.0% | |
| GTTTCATCATCACCTTGGGA+TGG | + | chr1.1:79283751-79283770 | None:intergenic | 45.0% | |
| TCCAAATATCAGGCACACCA+GGG | + | chr1.1:79285018-79285037 | None:intergenic | 45.0% | |
| TTCCAAATATCAGGCACACC+AGG | + | chr1.1:79285019-79285038 | None:intergenic | 45.0% | |
| TTCTTCCAATGCAAGCCAAC+TGG | + | chr1.1:79283529-79283548 | None:intergenic | 45.0% | |
| TTGTCAAAAGAATGGACGGC+CGG | - | chr1.1:79283683-79283702 | MS.gene76221:CDS | 45.0% | |
| TTTAGCACTACTACTGGTCC+TGG | + | chr1.1:79284830-79284849 | None:intergenic | 45.0% | |
| ! | CATTAGGTTGTTCCATCCCA+AGG | - | chr1.1:79283736-79283755 | MS.gene76221:intron | 45.0% |
| ! | GTGACCTTTTTCCTGTCAGT+TGG | + | chr1.1:79284096-79284115 | None:intergenic | 45.0% |
| !! | AAAACGACTCGGGTTTTTCG+AGG | + | chr1.1:79284625-79284644 | None:intergenic | 45.0% |
| AAATATCAGGCACACCAGGG+AGG | + | chr1.1:79285015-79285034 | None:intergenic | 50.0% | |
| AATGGCTGCAATCAGAGGAC+TGG | + | chr1.1:79284988-79285007 | None:intergenic | 50.0% | |
| AGTCCTCTGATTGCAGCCAT+TGG | - | chr1.1:79284987-79285006 | MS.gene76221:CDS | 50.0% | |
| AGTGGCGAGATAAGGACAGT+TGG | + | chr1.1:79283655-79283674 | None:intergenic | 50.0% | |
| CAATACATGGGCAAAGTGGG+TGG | - | chr1.1:79284585-79284604 | MS.gene76221:intron | 50.0% | |
| GGAACGAAATGCTGAGTGCA+TGG | - | chr1.1:79285035-79285054 | MS.gene76221:CDS | 50.0% | |
| GTTACTGCAGTGGCGAGATA+AGG | + | chr1.1:79283663-79283682 | None:intergenic | 50.0% | |
| GTTCTTCTGGGCACCACTAT+TGG | - | chr1.1:79284247-79284266 | MS.gene76221:CDS | 50.0% | |
| TCCCTGGTGTGCCTGATATT+TGG | - | chr1.1:79285014-79285033 | MS.gene76221:CDS | 50.0% | |
| TTCAGCCACATGCATGTTCC+AGG | - | chr1.1:79284809-79284828 | MS.gene76221:CDS | 50.0% | |
| !! | AGTGTCCAGTTGGCTTGCAT+TGG | - | chr1.1:79283521-79283540 | MS.gene76221:CDS | 50.0% |
| !! | ATCCAGAGGAAGTGTCCAGT+TGG | - | chr1.1:79283511-79283530 | MS.gene76221:CDS | 50.0% |
| !! | GCTCATTGGTGGACTCATTC+TGG | - | chr1.1:79284374-79284393 | MS.gene76221:CDS | 50.0% |
| AGCCAACTGGACACTTCCTC+TGG | + | chr1.1:79283516-79283535 | None:intergenic | 55.0% | |
| CTGGTCCTGGAACATGCATG+TGG | + | chr1.1:79284817-79284836 | None:intergenic | 55.0% | |
| GCACCAATGGCTGCAATCAG+AGG | + | chr1.1:79284993-79285012 | None:intergenic | 55.0% | |
| ! | TGCAGCCATTGGTGCCTCCC+TGG | - | chr1.1:79284998-79285017 | MS.gene76221:CDS | 65.0% |
| !! | GCACACCAGGGAGGCACCAA+TGG | + | chr1.1:79285006-79285025 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79283435 | 79285063 | 79283435 | ID=MS.gene76221 |
| chr1.1 | mRNA | 79283435 | 79285063 | 79283435 | ID=MS.gene76221.t1;Parent=MS.gene76221 |
| chr1.1 | exon | 79284741 | 79285063 | 79284741 | ID=MS.gene76221.t1.exon1;Parent=MS.gene76221.t1 |
| chr1.1 | CDS | 79284741 | 79285063 | 79284741 | ID=cds.MS.gene76221.t1;Parent=MS.gene76221.t1 |
| chr1.1 | exon | 79284349 | 79284520 | 79284349 | ID=MS.gene76221.t1.exon2;Parent=MS.gene76221.t1 |
| chr1.1 | CDS | 79284349 | 79284520 | 79284349 | ID=cds.MS.gene76221.t1;Parent=MS.gene76221.t1 |
| chr1.1 | exon | 79284090 | 79284271 | 79284090 | ID=MS.gene76221.t1.exon3;Parent=MS.gene76221.t1 |
| chr1.1 | CDS | 79284090 | 79284271 | 79284090 | ID=cds.MS.gene76221.t1;Parent=MS.gene76221.t1 |
| chr1.1 | exon | 79283827 | 79283985 | 79283827 | ID=MS.gene76221.t1.exon4;Parent=MS.gene76221.t1 |
| chr1.1 | CDS | 79283827 | 79283985 | 79283827 | ID=cds.MS.gene76221.t1;Parent=MS.gene76221.t1 |
| chr1.1 | exon | 79283435 | 79283735 | 79283435 | ID=MS.gene76221.t1.exon5;Parent=MS.gene76221.t1 |
| chr1.1 | CDS | 79283435 | 79283735 | 79283435 | ID=cds.MS.gene76221.t1;Parent=MS.gene76221.t1 |
| Gene Sequence |
| Protein sequence |
